Supplementary Information for "Rapid Analysis of the DNA Binding Specificities of Transcription Factors with DNA Microarrays"


Supplementary Data

(a) Complete listing of all predicted target genes from analysis of the PBM and ChIP-chip data for each of Rap1, Abf1, and Mig1.
(b) Raw masliner data for each of the triplicate PBM microarray datasets for each of Rap1, Abf1, and Mig1, and also for triplicate SybrGreen I stained microarrays.
(c) Complete listing of p-values for each intergenic region for each of Rap1, Abf1, and Mig1.
(d) Complete listing of all significantly enriched functional categories for each of Rap1, Abf1, and Mig1.
(e) Listing of what percentage of PBM-derived predicted target genes were up- or down-regulated in each significant condition for each of Abf1, Mig1, and Rap1.


 

(a) Complete listing of all predicted target genes from analysis of the PBM and ChIP-chip data for each of Rap1, Abf1, and Mig1.

The following Excel file contains separate worksheets that each contain lists of target genes for Rap1, Abf1, or Mig1.  Spreadsheets ending in “alldata” indicate that all S. cerevisiae target genes are provided, not taking into account cross-species conservation of the predicted TF binding sites; filenames ending in “2SD” indicate that only those S. cerevisiae target genes that have a site within two standard deviations of the motif average conserved across all 5 sensu stricto yeast species are provided; filenames ending in “exact” indicate that only those S. cerevisiae target genes that have a site 100% conserved across all 5 sensu stricto yeast species are provided:

Rap1Abf1Mig_targetgenes.xls

 To approximate the potential false positive rate from PBMs, we determined the fraction of spots passing a 0.001 p-value threshold that were not identified by BioProspector as belonging to the given TF’s binding site motif. This is by no means a perfect measure; for example, some of these potential false positives could simply have either weak matches to the identified motif or perhaps have multiple occurrences of lower affinity sites that were not identified by the motif finder as belonging to the motif that represents the majority of the identified binding sites. In fact, one such spot passing the 0.001 p-value threshold but that had only a weak sequence match to the Rap1 binding site motif was confirmed by EMSAs to be bound by Rap1 in vitro (data not shown). Nevertheless, using this approximate measure we found that our false positive rates ranged from approximately 7% to 9% of ‘bound’ spots. Similarly, we estimated the potential false negative rate as the fraction of spots containing a match to the binding site motif that did not pass the 0.001 p-value threshold in PBMs. Because we used such a stringent threshold in calling a spot bound in PBMs, we expected high false negative rates. Accordingly, we observed false negative rates between 19% and 86%. We have used a stringent p-value threshold of 0.001 even though we anticipate that it may increase our false negative rate, so as to increase the likelihood that spots passing our p-value threshold correspond to true positives. We found these estimates to be extremely sensitive to the length and degeneracy of the discovered binding site motifs.

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(b) Raw masliner data for each of the triplicate PBM microarray datasets for each of Rap1, Abf1, and Mig1, and also for triplicate SybrGreen I stained microarrays.

All experiments were performed in triplicate.   
Images were scanned on a GSI Lumonics ScanArray 4000 or ScanArray 5000 over a wide range of laser powers settings.   
Image analysis was performed using GenePix Pro 3.0 software (Axon Instruments, Inc.).   
Multiple scans from different scanner sensitivity settings were combined using masliner software.   

The following files are the abbreviated masliner outputs after combining multiple scans of different intensities.   

DEFINITIONS   
Block    Sector on microarray, each composed of 16 x 16 individual spots
Column    Column of spot within block
Row    Row of spot within block
Name    Intergenic region ID, based on Research Genetics primer set
F1 Median    Median pixel intensity of spot
F1 Mean    Mean pixel intensity of spot
F1 SD    Standard deviation over all pixel intensities of spot
B1 Median    Median local background pixel intensity
B1 Mean    Mean local background pixel intensity
B1 SD    Standard deviation over all local background pixel intensities
% > B1+1SD    Percent of pixels in spot with intensity greater than one standard deviation above median background pixel intensity
% > B1+2SD    Percent of pixels in spot with intensity greater than two standard deviations above median background pixel intensity
F1 % Sat.    Percent of saturated pixels in spot
Flags    Flagged spots from image analysis; -50 = flag not found; -75 = flagged as empty; -100 = flagged (manually) as bad
ADJCOUNT    Number of adjustments made over all masliner iterations
ADJBSI    Masliner adjusted background-subtracted intensity
REGERR    Masliner's calculated error due to background and linear regression

masliner_rawdata.xls

The individual GenePix files for all scans are available here.

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(c) Complete listing of p-values for each intergenic region for each of Rap1, Abf1, and Mig1.

"Indiv p-value" corresponds to p-value before adjusting for multiple hypothesis testing.
"Bonferroni p-value" corresponds to p-value after correction for multiple hypothesis testing.

PBM_pvalues.txt

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(d)  Complete listing of all significantly enriched functional categories for each of Rap1, Abf1, and Mig1.

The following files contain data on functional category enrichment analysis, performed using FunSpec with a Bonferroni-corrected p-value threshold equal to 0.05.

Files are named as follows:
"PBM" refers to all those spots passing a 0.001 Bonferroni-corrected p-value threshold in the PBM data;
"ChIP" refers to all those spots passing either a 0.001 p-value threshold in the Lee et al. ChIP-chip data or the 93 percentile in the Lieb et al. ChIP-chip data;
"PBMandChIP" refers to all those spots passing the thresholds for being called "bound" in both the PBM and also the ChIP-chip data;
"PBMnotChIP" refers to all those spots passing a 0.001 Bonferroni-corrected p-value in the PBM data but not passing the respective threshold in the ChIP-chip data;
"ChIPnotPBM" refers to all those spots passing the respective threshold in the ChIP-chip data but not passing a 0.001 Bonferroni-corrected p-value in the PBM data;
"exact" refers to all those sites containing a 100% sequence match at all informative nucleotide positions in all 5 sensu stricto yeast species;
"2SD" refers to all those sites containing a position weight matrix match, within 2 standard deviations of the PBM motif average, in all 5 sensu stricto yeast species;
"alldata" refers to the S. cerevisiae sites, not considering conservation across the 5 sensu stricto yeast species.
"Lee" refers to the Lee et al. Rap1 ChIP-chip data.
"Lieb" refers to the Lieb et al. Rap1 ChIP-chip data.
The Abf1 and Mig1 ChIP-chip data are from Lee et al.

Abf1-PBM-alldata.FunSpec.txt
Abf1-PBM-2SD.FunSpec.txt
Abf1-PBM-exact.FunSpec.txt
Abf1-ChIP-alldata.FunSpec.txt
Abf1-ChIP-2SD.FunSpec.txt
Abf1-ChIP-exact.FunSpec.txt
Abf1-PBMandChIP-alldata.FunSpec.txt
Abf1-PBMandChIP-2SD.FunSpec.txt
Abf1-PBMandChIP-exact.FunSpec.txt
Abf1-PBMandnotChIP-alldata.FunSpec.txt
Abf1-PBMandnotChIP-2SD.FunSpec.txt
Abf1-PBMandnotChIP-exact.FunSpec.txt
Abf1-ChIPandnotPBM-alldata.FunSpec.txt
Abf1-ChIPandnotPBM-2SD.FunSpec.txt
Abf1-ChIPandnotPBM-exact.FunSpec.txt

Rap1-PBM-alldata.FunSpec.txt
Rap1-PBM-2SD.FunSpec.txt
Rap1-PBM-exact.FunSpec.txt
Rap1-LeeChIP-alldata.FunSpec.txt
Rap1-LeeChIP-2SD.FunSpec.txt
Rap1-LeeChIP-exact.FunSpec.txt
Rap1-PBMandLeeChIP-alldata.FunSpec.txt
Rap1-PBMandLeeChIP-2SD.FunSpec.txt
Rap1-PBMandLeeChIP-exact.FunSpec.txt
Rap1-PBMandnotLeeChIP-alldata.FunSpec.txt
Rap1-PBMandnotLeeChIP-2SD.FunSpec.txt
Rap1-PBMandnotLeeChIP-exact.FunSpec.txt
Rap1-LeeChIPandnotPBM-alldata.FunSpec.txt
Rap1-LeeChIPandnotPBM-2SD.FunSpec.txt
Rap1-LeeChIPandnotPBM-exact.FunSpec.txt
Rap1-LiebChIP-alldata.FunSpec.txt
Rap1-LiebChIP-2SD.FunSpec.txt
Rap1-LiebChIP-exact.FunSpec.txt
Rap1-PBMandLiebChIP-alldata.FunSpec.txt
Rap1-PBMandLiebChIP-2SD.FunSpec.txt
Rap1-PBMandLiebChIP-exact.FunSpec.txt
Rap1-PBMandnotLiebChIP-alldata.FunSpec.txt
Rap1-PBMandnotLiebChIP-2SD.FunSpec.txt
Rap1-PBMandnotLiebChIP-exact.FunSpec.txt
Rap1-LiebChIPandnotPBM-alldata.FunSpec.txt
Rap1-LiebChIPandnotPBM-2SD.FunSpec.txt
Rap1-LiebChIPandnotPBM-exact.FunSpec.txt
Rap1-LeeORLiebChIP-alldata.FunSpec.txt
Rap1-LeeORLiebChIP-2SD.FunSpec.txt
Rap1-LeeORLiebChIP-exact.FunSpec.txt
Rap1-PBMandLeeORLiebChIP-alldata.FunSpec.txt
Rap1-PBMandLeeORLiebChIP-2SD.FunSpec.txt
Rap1-PBMandLeeORLiebChIP-exact.FunSpec.txt
Rap1-PBMandnotLeeORLiebChIP-alldata.FunSpec.txt
Rap1-PBMandnotLeeORLiebChIP-2SD.FunSpec.txt
Rap1-PBMandnotLeeORLiebChIP-exact.FunSpec.txt
Rap1-LeeORLiebChIPandnotPBM-alldata.FunSpec.txt
Rap1-LeeORLiebChIPandnotPBM-2SD.FunSpec.txt
Rap1-LeeORLiebChIPandnotPBM-exact.FunSpec.txt

Mig1-PBM-alldata.FunSpec.txt
Mig1-PBM-2SD.FunSpec.txt
Mig1-PBM-exact.FunSpec.txt
Mig1-ChIP-alldata.FunSpec.txt
Mig1-ChIP-2SD.FunSpec.txt

Mig1-ChIP-exact.FunSpec.txt:  doesn't exist because 0 intergenic regions passed this site conservation criterion
Mig1-PBMandChIP-alldata.FunSpec.txt
Mig1-PBMandChIP-2SD.FunSpec.txt: doesn't exist because 0 intergenic regions passed this site conservation criterion
Mig1-PBMandChIP-exact.FunSpec.txt:  doesn't exist because 0 intergenic regions passed this site conservation criterion
Mig1-PBMandnotChIP-alldata.FunSpec.txt
Mig1-PBMandnotChIP-2SD.FunSpec.txt
Mig1-PBMandnotChIP-exact.FunSpec.txt
Mig1-ChIPandnotPBM-alldata.FunSpec.txt
Mig1-ChIPandnotPBM-2SD.FunSpec.txt

Mig1-ChIPandnotPBM-exact.FunSpec.txt:  doesn't exist because 0 intergenic regions passed this site conservation criterion

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Tab-delimited text files that are linked to from the above section (d) are provided below:


Abf1-PBM-alldata.FunSpec.txt

 Input Cluster (n=263)

YAL023C        PMT2

YAL042W       ERV46

YAL043C        PTA1

YAL053W

YAL054C        ACS1

YBL007C        SLA1

YBL038W       MRPL16

YBL039C        URA7

YBL056W       PTC3

YBL057C

YBL063W       KIP1

YBL064C

YBR031W       RPL4A

YBR058C        UBP14

YBR058C-A   TSC3

YBR101C

YBR109C        CMD1

YBR110W       ALG1

YBR146W       MRPS9

YBR162C        TOS1

YBR162W-A  YSY6

YBR163W       DEM1

YBR169C        SSE2

YBR279W       PAF1

YBR283C        SSH1

YBR284W

YBR290W       BSD2

YCL011C        GBP2

YCL031C        RRP7

YCL044C

YCL045C

YCR053W      THR4

YCR065W      HCM1

YCR082W

YCR092C       MSH3

YCR093W      CDC39

YDL028C        MPS1

YDL035C        GPR1

YDL053C

YDL081C        RPP1A

YDL084W       SUB2

YDL105W       QRI2

YDL106C        PHO2

YDL116W       NUP84

YDL130W-A  STF1

YDL193W

YDL229W       SSB1

YDR004W      RAD57

YDR005C       MAF1

YDR028C       REG1

YDR093W      DNF2

YDR138W      HPR1

YDR194C       MSS116

YDR195W      REF2

YDR206W      EBS1

YDR216W      ADR1

YDR222W

YDR233C       RTN1

YDR234W      LYS4

YDR280W      RRP45

YDR283C       GCN2

YDR326C

YDR359C       VID21

YDR361C       BCP1

YDR384C       ATO3

YDR385W      EFT2

YDR394W      RPT3

YDR404C       RPB7

YDR405W      MRP20

YDR407C       TRS120

YDR462W      MRPL28

YDR464W      SPP41

YEL017C-A    PMP2

YEL017W

YER026C        CHO1

YER071C

YER072W       VTC1

YER089C        PTC2

YER090W       TRP2

YER122C        GLO3

YER123W       YCK3

YER141W       COX15

YER161C        SPT2

YER189W

YFL017W-A   SMX2

YFL018C        LPD1

YFL023W       BUD27

YFL024C        EPL1

YFL037W       TUB2

YFL038C        YPT1

YFL047W       RGD2

YFL048C        EMP47

YGL010W

YGL011C        SCL1

YGL025C        PGD1

YGL036W

YGL037C        PNC1

YGL077C        HNM1

YGL106W       MLC1

YGL107C        RMD9

YGL122C        NAB2

YGL192W       IME4

YGL194C        HOS2

YGL195W       GCN1

YGL222C        EDC1

YGL234W       "ADE5,7"

YGL236C        MTO1

YGR007W      MUQ1

YGR059W      SPR3

YGR074W      SMD1

YGR183C       QCR9

YGR187C       HGH1

YGR282C       BGL2

YHL027W       RIM101

YHL028W       WSC4

YHL029C

YHR005C-A   MRS11

YHR019C       DED81

YHR020W

YHR051W      COX6

YHR061C       GIC1

YHR064C       SSZ1

YHR065C       RRP3

YHR066W      SSF1

YHR077C       NMD2

YHR078W

YHR079C-A   SAE3

YHR080C

YHR081W      LRP1

YHR115C

YHR116W

YIL053W        RHR2

YIL055C

YIL134W        FLX1

YIL135C

YJL003W        COX16

YJL004C         SYS1

YJL008C         CCT8

YJL055W

YJL056C         ZAP1

YJL111W        CCT7

YJL122W

YJL123C

YJL174W        KRE9

YJL176C         SWI3

YJR062C         NTA1

YJR063W        RPA12

YJR088C

YJR089W        BIR1

YJR137C         ECM17

YJR138W        IML1

YKL014C

YKL015W      PUT3

YKL016C       ATP7

YKL019W      RAM2

YKL020C       SPT23

YKL098W

YKL099C       UTP11

YKL112W      ABF1

YKL113C       RAD27

YKL149C       DBR1

YKL167C       MRP49

YKL172W      EBP2

YKL190W      CNB1

YKL195W

YKL196C       YKT6

YKL210W      UBA1

YKR029C       SET3

YKR030W      MSG1

YKR046C

YKR057W      RPS21A

YKR081C       RPF2

YKR082W      NUP133

YKR084C       HBS1

YLL011W       SOF1

YLL012W

YLL013C        PUF3

YLR055C        SPT8

YLR056W       ERG3

YLR095C        IOC2

YLR096W       KIN2

YLR179C

YLR180W       SAM1

YLR203C        MSS51

YLR204W       QRI5

YLR264W       RPS28B

YLR293C        GSP1

YLR314C        CDC3

YLR330W       CHS5

YLR396C        VPS33

YLR398C        SKI2

YLR421C        RPN13

YLR422W

YML009C       MRPL39

YMR052W      FAR3

YMR060C       TOM37

YMR061W      RNA14

YMR066W      SOV1

YMR078C       CTF18

YMR079W      SEC14

YMR129W      POM152

YMR197C       VTI1

YMR198W      CIK1

YMR203W      TOM40

YMR296C       LCB1

YMR297W      PRC1

YMR309C       NIP1

YNL036W      NCE103

YNL037C       IDH1

YNL085W      MKT1

YNL112W      DBP2

YNL116W

YNL119W

YNL121C       TOM70

YNL131W      TOM22

YNL183C       NPR1

YNL189W      SRP1

YNL212W      VID27

YNL213C

YNL250W      RAD50

YNL251C       NRD1

YNL287W      SEC21

YNR035C       ARC35

YNR046W

YOL025W      LAG2

YOL026C

YOL036W

YOL058W      ARG1

YOL076W      MDM20

YOL077C       BRX1

YOL104C       NDJ1

YOL116W      MSN1

YOR045W      TOM6

YOR089C       VPS21

YOR098C       NUP1

YOR099W      KTR1

YOR116C       RPO31

YOR117W      RPT5

YOR141C       ARP8

YOR142W      LSC1

YOR145C

YOR147W      MDM32

YOR167C       RPS28A

YOR168W      GLN4

YOR194C       TOA1

YOR195W      SLK19

YOR205C

YOR206W      NOC2

YOR207C       RET1

YOR208W      PTP2

YOR209C       NPT1

YOR210W      RPB10

YOR213C       SAS5

YOR254C       SEC63

YOR255W

YOR261C       RPN8

YOR262W

YPL138C        SPP1

YPL211W       NIP7

YPL212C        PUS1

YPL242C        IQG1

YPR181C        SEC23

YPR182W       SMX3

 

Genes Not Found:

 

SNR14

SNR68

TM%28CAU%29J2

TS%28GCU%29O

YDR003W-A

YDR194W-A

YER188C-A

YHR050W-A

YIL134C-A

YMR050C

YMR051C

YOL103W-A

YOL103W-B

MIPS Functional Classification

Category          p-value In Category from Cluster          k          f

SUBCELLULAR LOCALISATION   3.24185e-13    PMT2 ERV46 PTA1 ACS1 SLA1 MRPL16 URA7 KIP1 RPL4A CMD1 ALG1 MRPS9 SSE2 PAF1 SSH1 BSD2 GBP2 THR4 HCM1 MSH3 CDC39 GPR1 RPP1A PHO2 NUP84 STF1 SSB1 RAD57 REG1 HPR1 MSS116 REF2 ADR1 RTN1 LYS4 GCN2 EFT2 RPT3 RPB7 MRP20 TRS120 MRPL28 PMP2 CHO1 VTC1 TRP2 GLO3 YCK3 COX15 SPT2 SMX2 LPD1 TUB2 YPT1 EMP47 SCL1 PGD1 HNM1 NAB2 IME4 GCN1 MTO1 SPR3 SMD1 QCR9 BGL2 RIM101 MRS11 COX6 RRP3 SSF1 NMD2 FLX1 CCT8 ZAP1 CCT7 KRE9 SWI3 NTA1 RPA12 PUT3 ATP7 RAM2 SPT23 ABF1 RAD27 DBR1 MRP49 CNB1 YKT6 UBA1 RPS21A NUP133 HBS1 SOF1 SPT8 ERG3 KIN2 MSS51 RPS28B GSP1 CDC3 CHS5 VPS33 SKI2 MRPL39 TOM37 RNA14 CTF18 SEC14 POM152 VTI1 CIK1 TOM40 PRC1 NIP1 IDH1 DBP2 TOM70 TOM22 SRP1 YNL213C RAD50 NRD1 SEC21 ARC35 LAG2 ARG1 MDM20 NDJ1 MSN1 TOM6 VPS21 NUP1 KTR1 RPO31 RPT5 ARP8 RPS28A GLN4 TOA1 RET1 PTP2 RPB10 SAS5 SEC63 RPN8 NIP7 PUS1 IQG1 SEC23 SMX3 152      2256

nucleus 1.89671e-07    PTA1 KIP1 PAF1 GBP2 HCM1 MSH3 CDC39 PHO2 NUP84 RAD57 REG1 HPR1 REF2 ADR1 RPT3 RPB7 GLO3 YCK3 SPT2 SMX2 SCL1 PGD1 NAB2 IME4 SMD1 RIM101 RRP3 SSF1 ZAP1 SWI3 RPA12 PUT3 SPT23 ABF1 RAD27 DBR1 UBA1 NUP133 SOF1 SPT8 GSP1 SKI2 RNA14 CTF18 POM152 DBP2 SRP1 RAD50 NRD1 NDJ1 MSN1 NUP1 RPO31 RPT5 TOA1 RET1 RPB10 SAS5 RPN8 NIP7 PUS1 SMX3      62            774

 

 

 

MIPS Phenotypes

Category          p-value In Category from Cluster          k          f

 

 

 

MIPS Subcellular Localization

Category          p-value In Category from Cluster          k          f

nucleus 1.3319e-06      KIP1 PAF1 GBP2 HCM1 MSH3 CDC39 PHO2 NUP84 RAD57 REG1 HPR1 REF2 ADR1 RPT3 RPB7 VTC1 GLO3 YCK3 SPT2 SMX2 SCL1 PGD1 NAB2 IME4 SMD1 RIM101 RRP3 SSF1 ZAP1 SWI3 RPA12 PUT3 SPT23 ABF1 RAD27 DBR1 UBA1 NUP133 SOF1 SPT8 GSP1 SKI2 RNA14 CTF18 POM152 DBP2 SRP1 RAD50 NRD1 NDJ1 MSN1 NUP1 RPO31 RPT5 TOA1 NOC2 RET1 RPB10 SAS5 RPN8 NIP7 PUS1 SMX3             63        836

mitochondrial outer membrane  0.000684368   TOM37 TOM40 TOM70 TOM22 TOM6      5          18

 

 

 

MIPS Protein Complexes

Category          p-value In Category from Cluster          k          f

TOM - transport across the outer membrane     1.37507e-05    TOM37 TOM40 TOM70 TOM22 TOM6      5          9

Mitochondrial translocase complex        6.25385e-05    MRS11 TOM37 TOM40 TOM70 TOM22 TOM6     6          18

 

 

 

MIPS Protein Classes

Category          p-value In Category from Cluster          k          f

 

 

 

GO Molecular Function

Category          p-value In Category from Cluster          k          f

 

 

 

GO Biological Process

Category          p-value In Category from Cluster          k          f

metabolism [GO:0008152]       7.69484e-08    PMT2 ERV46 PTA1 ACS1 MRPL16 URA7 PTC3 RPL4A UBP14 TSC3 ALG1 MRPS9 YSY6 SSE2 PAF1 SSH1 BSD2 RRP7 THR4 HCM1 MSH3 CDC39 RPP1A SUB2 PHO2 NUP84 SSB1 RAD57 MAF1 REG1 HPR1 MSS116 REF2 ADR1 LYS4 RRP45 GCN2 EFT2 RPT3 RPB7 MRP20 TRS120 MRPL28 SPP41 CHO1 PTC2 TRP2 GLO3 YCK3 COX15 SPT2 SMX2 LPD1 EPL1 YPT1 EMP47 SCL1 PGD1 PNC1 NAB2 IME4 HOS2 GCN1 EDC1 "ADE5,7" MTO1 MUQ1 SMD1 QCR9 RIM101 MRS11 DED81 COX6 SSZ1 RRP3 NMD2 SAE3 YHR116W RHR2 SYS1 CCT8 ZAP1 CCT7 KRE9 SWI3 NTA1 RPA12 ECM17 PUT3 RAM2 SPT23 UTP11 ABF1 RAD27 DBR1 MRP49 EBP2 YKT6 UBA1 SET3 RPS21A NUP133 HBS1 SOF1 PUF3 SPT8 ERG3 SAM1 MSS51 RPS28B GSP1 CHS5 VPS33 SKI2 RPN13 MRPL39 TOM37 RNA14 SEC14 POM152 VTI1 TOM40 LCB1 PRC1 NIP1 IDH1 TOM70 TOM22 NPR1 RAD50 NRD1 SEC21 ARG1 TOM6 VPS21 NUP1 KTR1 RPO31 RPT5 LSC1 RPS28A GLN4 TOA1 RET1 PTP2 NPT1 RPB10 SAS5 SEC63 RPN8 SPP1 NIP7 PUS1 SEC23 SMX3        155      2693

cell growth and/or maintenance [GO:0008151] 1.61401e-07    PMT2 ERV46 PTA1 ACS1 SLA1 MRPL16 URA7 PTC3 KIP1 YBL064C RPL4A UBP14 TSC3 CMD1 ALG1 MRPS9 YSY6 SSE2 PAF1 SSH1 BSD2 RRP7 THR4 HCM1 MSH3 CDC39 MPS1 GPR1 RPP1A SUB2 PHO2 NUP84 STF1 SSB1 RAD57 MAF1 REG1 DNF2 HPR1 MSS116 REF2 EBS1 ADR1 LYS4 RRP45 GCN2 EFT2 RPT3 RPB7 MRP20 TRS120 MRPL28 SPP41 PMP2 CHO1 VTC1 PTC2 TRP2 GLO3 YCK3 COX15 SPT2 SMX2 LPD1 BUD27 EPL1 TUB2 YPT1 EMP47 SCL1 PGD1 PNC1 HNM1 MLC1 NAB2 IME4 HOS2 GCN1 EDC1 "ADE5,7" MTO1 MUQ1 SPR3 SMD1 QCR9 BGL2 RIM101 WSC4 MRS11 DED81 COX6 GIC1 SSZ1 RRP3 SSF1 NMD2 SAE3 YHR116W RHR2 FLX1 SYS1 CCT8 ZAP1 CCT7 KRE9 SWI3 NTA1 RPA12 BIR1 ECM17 PUT3 ATP7 RAM2 SPT23 UTP11 ABF1 RAD27 DBR1 MRP49 EBP2 CNB1 YKT6 UBA1 SET3 RPS21A RPF2 NUP133 HBS1 SOF1 PUF3 SPT8 ERG3 SAM1 MSS51 RPS28B GSP1 CDC3 CHS5 VPS33 SKI2 RPN13 MRPL39 FAR3 TOM37 RNA14 CTF18 SEC14 POM152 VTI1 CIK1 TOM40 LCB1 PRC1 NIP1 IDH1 TOM70 TOM22 NPR1 SRP1 RAD50 NRD1 SEC21 ARC35 ARG1 MDM20 BRX1 NDJ1 MSN1 TOM6 VPS21 NUP1 KTR1 RPO31 RPT5 LSC1 MDM32 RPS28A GLN4 TOA1 SLK19 RET1 PTP2 NPT1 RPB10 SAS5 SEC63 RPN8 SPP1 NIP7 PUS1 IQG1 SEC23 SMX3            193      3657

cell organization and biogenesis [GO:0016043] 8.11876e-06    SLA1 KIP1 CMD1 BSD2 RRP7 HCM1 MPS1 NUP84 RAD57 EBS1 ADR1 RRP45 VTC1 BUD27 EPL1 TUB2 PNC1 MLC1 HOS2 SPR3 BGL2 WSC4 MRS11 GIC1 RRP3 SSF1 SYS1 CCT8 CCT7 KRE9 SWI3 ECM17 UTP11 ABF1 EBP2 CNB1 SET3 RPF2 NUP133 SOF1 SPT8 GSP1 CDC3 VPS33 TOM37 POM152 VTI1 CIK1 TOM40 PRC1 TOM70 TOM22 RAD50 MDM20 BRX1 TOM6 VPS21 NUP1 KTR1 MDM32 SLK19 NPT1 SAS5 SPP1 NIP7 IQG1          66        939

nucleobase, nucleoside, nucleotide and nucleic acid metabolism [GO:0006139] 1.13673e-05    PTA1 URA7 PTC3 PAF1 RRP7 HCM1 MSH3 CDC39 SUB2 PHO2 NUP84 RAD57 MAF1 REG1 HPR1 MSS116 REF2 ADR1 RRP45 RPB7 SPP41 PTC2 SPT2 SMX2 EPL1 PGD1 PNC1 NAB2 IME4 HOS2 EDC1 "ADE5,7" SMD1 RIM101 RRP3 NMD2 SAE3 ZAP1 SWI3 RPA12 PUT3 SPT23 UTP11 ABF1 RAD27 DBR1 EBP2 SET3 NUP133 SOF1 PUF3 SPT8 MSS51 GSP1 SKI2 RNA14 POM152 RAD50 NRD1 NUP1 RPO31 TOA1 RET1 PTP2 NPT1 RPB10 SAS5 SPP1 NIP7 PUS1 SMX3      71        1046

protein metabolism [GO:0019538]        1.24089e-05    PMT2 ERV46 MRPL16 PTC3 RPL4A UBP14 ALG1 MRPS9 YSY6 SSE2 SSH1 BSD2 RPP1A NUP84 SSB1 GCN2 EFT2 RPT3 MRP20 TRS120 MRPL28 PTC2 GLO3 YCK3 COX15 EPL1 YPT1 EMP47 SCL1 HOS2 GCN1 MTO1 MRS11 DED81 SSZ1 SYS1 CCT8 CCT7 NTA1 RAM2 MRP49 YKT6 UBA1 SET3 RPS21A NUP133 HBS1 SPT8 MSS51 RPS28B CHS5 VPS33 SKI2 RPN13 MRPL39 TOM37 SEC14 POM152 VTI1 TOM40 PRC1 NIP1 TOM70 TOM22 SEC21 TOM6 VPS21 NUP1 KTR1 RPT5 RPS28A GLN4 PTP2 SEC63 RPN8 SPP1 SEC23     77        1168

 

 

 

GO Cellular Component

Category          p-value In Category from Cluster          k          f

intracellular [GO:0005622]       6.58921e-09    PMT2 ERV46 PTA1 ACS1 SLA1 MRPL16 URA7 KIP1 YBL064C RPL4A CMD1 MRPS9 SSE2 PAF1 SSH1 BSD2 GBP2 HCM1 MSH3 CDC39 MPS1 GPR1 RPP1A SUB2 NUP84 STF1 YDL193W SSB1 RAD57 MAF1 REG1 DNF2 HPR1 MSS116 EBS1 ADR1 LYS4 RRP45 GCN2 EFT2 RPT3 RPB7 MRP20 TRS120 MRPL28 CHO1 VTC1 GLO3 YCK3 COX15 SPT2 SMX2 LPD1 EPL1 TUB2 YPT1 EMP47 SCL1 PGD1 HNM1 MLC1 NAB2 HOS2 GCN1 "ADE5,7" MTO1 SPR3 SMD1 QCR9 MRS11 DED81 COX6 GIC1 SSZ1 RRP3 SSF1 NMD2 YHR115C FLX1 SYS1 CCT8 ZAP1 CCT7 SWI3 RPA12 BIR1 PUT3 ATP7 RAM2 SPT23 UTP11 ABF1 RAD27 DBR1 MRP49 EBP2 CNB1 UBA1 SET3 YKR046C RPS21A RPF2 NUP133 SOF1 SPT8 ERG3 YLR179C SAM1 RPS28B GSP1 CDC3 CHS5 VPS33 SKI2 RPN13 MRPL39 TOM37 RNA14 CTF18 SEC14 POM152 VTI1 CIK1 TOM40 LCB1 PRC1 NIP1 NCE103 IDH1 TOM70 TOM22 NPR1 SRP1 RAD50 NRD1 SEC21 ARC35 ARG1 MDM20 BRX1 NDJ1 MSN1 TOM6 VPS21 NUP1 KTR1 RPO31 RPT5 LSC1 YOR145C RPS28A GLN4 TOA1 SLK19 NOC2 RET1 PTP2 NPT1 RPB10 SAS5 SEC63 RPN8 SPP1 NIP7 PUS1 IQG1 SEC23 SMX3             168      2921

cell [GO:0005623]       2.1333e-08      PMT2 ERV46 PTA1 ACS1 SLA1 MRPL16 URA7 KIP1 YBL064C RPL4A TSC3 CMD1 MRPS9 SSE2 PAF1 SSH1 BSD2 GBP2 HCM1 MSH3 CDC39 MPS1 GPR1 RPP1A SUB2 NUP84 STF1 YDL193W SSB1 RAD57 MAF1 REG1 DNF2 HPR1 MSS116 EBS1 ADR1 LYS4 RRP45 GCN2 EFT2 RPT3 RPB7 MRP20 TRS120 MRPL28 PMP2 CHO1 VTC1 GLO3 YCK3 COX15 SPT2 SMX2 LPD1 EPL1 TUB2 YPT1 EMP47 SCL1 PGD1 HNM1 MLC1 NAB2 HOS2 GCN1 "ADE5,7" MTO1 SPR3 SMD1 QCR9 WSC4 MRS11 DED81 COX6 GIC1 SSZ1 RRP3 SSF1 NMD2 YHR115C FLX1 SYS1 CCT8 ZAP1 CCT7 SWI3 RPA12 BIR1 PUT3 ATP7 RAM2 SPT23 UTP11 ABF1 RAD27 DBR1 MRP49 EBP2 CNB1 YKT6 UBA1 SET3 YKR046C RPS21A RPF2 NUP133 SOF1 SPT8 ERG3 KIN2 YLR179C SAM1 RPS28B GSP1 CDC3 CHS5 VPS33 SKI2 RPN13 MRPL39 TOM37 RNA14 CTF18 SEC14 POM152 VTI1 CIK1 TOM40 LCB1 PRC1 NIP1 NCE103 IDH1 DBP2 TOM70 TOM22 NPR1 SRP1 RAD50 NRD1 SEC21 ARC35 ARG1 MDM20 BRX1 NDJ1 MSN1 TOM6 VPS21 NUP1 KTR1 RPO31 RPT5 LSC1 YOR145C RPS28A GLN4 TOA1 SLK19 NOC2 RET1 PTP2 NPT1 RPB10 SAS5 SEC63 RPN8 SPP1 NIP7 PUS1 IQG1 SEC23 SMX3            174      3106

mitochondrial outer membrane translocase complex [GO:0005742]       6.32812e-06    TOM37 TOM40 TOM70 TOM22 TOM6             5          8

cytoplasm [GO:0005737]         3.27065e-05    PMT2 ERV46 ACS1 SLA1 MRPL16 URA7 KIP1 YBL064C RPL4A CMD1 MRPS9 SSE2 SSH1 BSD2 CDC39 MPS1 RPP1A STF1 YDL193W SSB1 REG1 MSS116 LYS4 RRP45 GCN2 EFT2 RPT3 MRP20 TRS120 MRPL28 CHO1 VTC1 GLO3 COX15 LPD1 TUB2 YPT1 EMP47 SCL1 MLC1 NAB2 GCN1 "ADE5,7" MTO1 SPR3 QCR9 MRS11 DED81 COX6 GIC1 SSZ1 NMD2 YHR115C FLX1 SYS1 CCT8 CCT7 ATP7 RAM2 SPT23 MRP49 CNB1 UBA1 YKR046C RPS21A ERG3 YLR179C SAM1 RPS28B CDC3 CHS5 VPS33 SKI2 RPN13 MRPL39 TOM37 SEC14 VTI1 CIK1 TOM40 LCB1 PRC1 NIP1 NCE103 IDH1 TOM70 TOM22 NPR1 SRP1 SEC21 ARC35 ARG1 MDM20 TOM6 VPS21 KTR1 RPT5 LSC1 YOR145C RPS28A GLN4 SEC63 RPN8 NIP7 IQG1 SEC23       106      1810

 

 

 

SMART Domains

Category          p-value In Category from Cluster          k          f

 

 

 

PFam-A Domains

Category          p-value In Category from Cluster          k          f

 

 

 

Yeast Two Hybrid - Uetz

Category          p-value In Category from Cluster          k          f

 

 

 

Yeast Two Hybrid - Ito (core)

Category          p-value In Category from Cluster          k          f

 

 

 

Yeast Two Hybrid - Ito (full)

Category          p-value In Category from Cluster          k          f

 

 

 

Synthetic Genetic Array Analysis

Category          p-value In Category from Cluster          k          f

 

 

 

MDS Proteomics Complexes

Category          p-value In Category from Cluster          k          f

 

 

 

Cellzome Complexes

Category          p-value In Category from Cluster          k          f

YBL039C (URA7)      4.32015e-05    URA7 RPT3 YKT6 SAM1 RPT5 RPN8         6          17

 

 

 

Proteome Localization--Observed

Category          p-value In Category from Cluster          k          f

nucleus 0.00393091     TOS1 YSY6 YCR082W SUB2 QRI2 HPR1 REF2 VID21 BCP1 YEL017W SPT2 EPL1 PGD1 NAB2 HOS2 EDC1 LRP1 YJL122W SWI3 BIR1 DBR1 RPF2 SPT8 IOC2 DBP2 SRP1 NRD1 MSN1 TOA1 NOC2 SPP1   31        450

 

 

 

Proteome Localization--Predicted+Observed

Category          p-value In Category from Cluster          k          f

nuc       0.000608534   SLA1 KIP1 CMD1 TOS1 PAF1 RRP7 HCM1 YCR082W MSH3 CDC39 MPS1 SUB2 QRI2 PHO2 NUP84 MAF1 REG1 HPR1 REF2 ADR1 VID21 BCP1 RPT3 RPB7 TRS120 SPP41 SPT2 EPL1 TUB2 PGD1 RMD9 NAB2 IME4 HOS2 EDC1 SMD1 RIM101 RRP3 SSF1 YHR080C LRP1 YIL135C YJL122W SWI3 RPA12 BIR1 IML1 YKL014C PUT3 YKL098W ABF1 DBR1 SET3 RPF2 SOF1 SPT8 IOC2 GSP1 YLR422W RNA14 CTF18 DBP2 SRP1 RAD50 NRD1 YOL036W NDJ1 MSN1 NUP1 RPO31 RPT5 ARP8 MDM32 TOA1 SLK19 NOC2 RET1 RPB10 SAS5 SPP1 NIP7 PUS1 SMX3            83        1435

 

 

 

Deletions Consortium (Essentiality, Morphology)

Category          p-value In Category from Cluster          k          f

essential            0.000120069   PTA1 CMD1 ALG1 RRP7 CDC39 MPS1 SUB2 QRI2 YDL193W RRP45 BCP1 RPT3 RPB7 TRS120 SPP41 EPL1 TUB2 YPT1 SCL1 NAB2 SMD1 MRS11 DED81 YHR020W RRP3 CCT8 CCT7 KRE9 YKL014C RAM2 UTP11 ABF1 EBP2 YKL195W YKT6 UBA1 RPF2 SOF1 CDC3 RNA14 SEC14 VTI1 TOM40 LCB1 NIP1 DBP2 TOM22 SRP1 NRD1 SEC21 ARC35 YNR046W YOL026C BRX1 NUP1 RPO31 RPT5 YOR145C GLN4 TOA1 NOC2 RET1 RPB10 SEC63 RPN8 YOR262W NIP7 IQG1 SEC23 SMX3          70            1101

 

 

 

Yeast Fitness Data

Category          p-value In Category from Cluster          k          f

Slow Growers  0.000515809   PMT2 URA7 DEM1 PAF1 SSH1 HCM1 RPP1A PHO2 NUP84 RAD57 REG1 HPR1 MSS116 REF2 VID21 MRP20 GLO3 COX15 LPD1 BUD27 RMD9 SSZ1 LRP1 FLX1 COX16 ZAP1 SWI3 RPA12 ATP7 RAD27 NUP133 ERG3 VPS33 TOM37 SOV1 CTF18 IDH1 YNL119W TOM70 RAD50 MDM20 YOR205C NPT1   43        617

 

 

 

Published Complexes

Category          p-value In Category from Cluster          k          f

Andersen et al. (2002) - Curr Bio 12:1-            0.0037549       SUB2 RRP45 TUB2 GCN1 SMD1 RRP3 SSF1 UTP11 EBP2 SOF1 CDC3 DBP2 SRP1 RAD50 NOC2        15        165

 

(go back to top)


Abf1-PBM-2SD.FunSpec.txt

Input Cluster (n=186)

YAL042W       ERV46

YAL043C        PTA1

YAL053W

YAL054C        ACS1

YBL007C        SLA1

YBL038W       MRPL16

YBL039C        URA7

YBL056W       PTC3

YBL057C

YBL063W       KIP1

YBL064C

YBR031W       RPL4A

YBR058C        UBP14

YBR058C-A   TSC3

YBR109C        CMD1

YBR110W       ALG1

YBR146W       MRPS9

YBR162C        TOS1

YBR162W-A  YSY6

YBR163W       DEM1

YBR169C        SSE2

YBR279W       PAF1

YBR290W       BSD2

YCL031C        RRP7

YCL044C

YCR053W      THR4

YCR065W      HCM1

YDL081C        RPP1A

YDL116W       NUP84

YDL130W-A  STF1

YDL193W

YDL229W       SSB1

YDR028C       REG1

YDR206W      EBS1

YDR222W

YDR233C       RTN1

YDR234W      LYS4

YDR283C       GCN2

YDR326C

YDR359C       VID21

YDR384C       ATO3

YDR385W      EFT2

YDR394W      RPT3

YDR404C       RPB7

YDR405W      MRP20

YDR407C       TRS120

YDR462W      MRPL28

YDR464W      SPP41

YER026C        CHO1

YER089C        PTC2

YER090W       TRP2

YER122C        GLO3

YER123W       YCK3

YER141W       COX15

YER161C        SPT2

YFL017W-A   SMX2

YFL018C        LPD1

YFL037W       TUB2

YFL038C        YPT1

YGL036W

YGL037C        PNC1

YGL077C        HNM1

YGL106W       MLC1

YGL107C        RMD9

YGL192W       IME4

YGL194C        HOS2

YGL234W       "ADE5,7"

YGL236C        MTO1

YGR007W      MUQ1

YGR059W      SPR3

YGR187C       HGH1

YGR282C       BGL2

YHL028W       WSC4

YHL029C

YHR005C-A   MRS11

YHR051W      COX6

YHR061C       GIC1

YHR064C       SSZ1

YHR065C       RRP3

YHR066W      SSF1

YHR079C-A   SAE3

YHR115C

YHR116W

YIL053W        RHR2

YIL055C

YIL134W        FLX1

YIL135C

YJL003W        COX16

YJL004C         SYS1

YJL111W        CCT7

YJL122W

YJL123C

YJL174W        KRE9

YJL176C         SWI3

YJR062C         NTA1

YJR063W        RPA12

YJR088C

YJR089W        BIR1

YJR137C         ECM17

YJR138W        IML1

YKL014C

YKL015W      PUT3

YKL016C       ATP7

YKL019W      RAM2

YKL020C       SPT23

YKL112W      ABF1

YKL113C       RAD27

YKL172W      EBP2

YKL190W      CNB1

YKL195W

YKL196C       YKT6

YKL210W      UBA1

YKR029C       SET3

YKR030W      MSG1

YKR046C

YKR057W      RPS21A

YKR084C       HBS1

YLL011W       SOF1

YLL012W

YLL013C        PUF3

YLR055C        SPT8

YLR056W       ERG3

YLR203C        MSS51

YLR204W       QRI5

YLR293C        GSP1

YLR314C        CDC3

YLR330W       CHS5

YLR396C        VPS33

YLR398C        SKI2

YLR421C        RPN13

YLR422W

YML009C       MRPL39

YMR060C       TOM37

YMR061W      RNA14

YMR066W      SOV1

YMR078C       CTF18

YMR079W      SEC14

YMR197C       VTI1

YMR198W      CIK1

YMR309C       NIP1

YNL036W      NCE103

YNL037C       IDH1

YNL085W      MKT1

YNL112W      DBP2

YNL116W

YNL119W

YNL121C       TOM70

YNL131W      TOM22

YNL183C       NPR1

YNL189W      SRP1

YNL212W      VID27

YNL213C

YNL287W      SEC21

YNR035C       ARC35

YOL025W      LAG2

YOL026C

YOL036W

YOL058W      ARG1

YOL076W      MDM20

YOL077C       BRX1

YOL104C       NDJ1

YOL116W      MSN1

YOR089C       VPS21

YOR098C       NUP1

YOR099W      KTR1

YOR116C       RPO31

YOR117W      RPT5

YOR141C       ARP8

YOR142W      LSC1

YOR145C

YOR147W      MDM32

YOR167C       RPS28A

YOR168W      GLN4

YOR194C       TOA1

YOR195W      SLK19

YOR205C

YOR206W      NOC2

YOR209C       NPT1

YOR210W      RPB10

YOR213C       SAS5

YOR254C       SEC63

YOR255W

YOR261C       RPN8

YOR262W

YPR181C        SEC23

YPR182W       SMX3

 

Genes Not Found:

 

SNR68

TS%28GCU%29O

YHR050W-A

YIL134C-A

YOL103W-A

YOL103W-B

MIPS Functional Classification

Category          p-value In Category from Cluster          k          f

SUBCELLULAR LOCALISATION   2.26323e-11    ERV46 PTA1 ACS1 SLA1 MRPL16 URA7 KIP1 RPL4A CMD1 ALG1 MRPS9 SSE2 PAF1 BSD2 THR4 HCM1 RPP1A NUP84 STF1 SSB1 REG1 RTN1 LYS4 GCN2 EFT2 RPT3 RPB7 MRP20 TRS120 MRPL28 CHO1 TRP2 GLO3 YCK3 COX15 SPT2 SMX2 LPD1 TUB2 YPT1 HNM1 IME4 MTO1 SPR3 BGL2 MRS11 COX6 RRP3 SSF1 FLX1 CCT7 KRE9 SWI3 NTA1 RPA12 PUT3 ATP7 RAM2 SPT23 ABF1 RAD27 CNB1 YKT6 UBA1 RPS21A HBS1 SOF1 SPT8 ERG3 MSS51 GSP1 CDC3 CHS5 VPS33 SKI2 MRPL39 TOM37 RNA14 CTF18 SEC14 VTI1 CIK1 NIP1 IDH1 DBP2 TOM70 TOM22 SRP1 YNL213C SEC21 ARC35 LAG2 ARG1 MDM20 NDJ1 MSN1 VPS21 NUP1 KTR1 RPO31 RPT5 ARP8 RPS28A GLN4 TOA1 RPB10 SAS5 SEC63 RPN8 SEC23 SMX3    111      2256

CELLULAR TRANSPORT AND TRANSPORT MECHANISMS    4.51252e-05    ERV46 KIP1 CMD1 YSY6 NUP84 TRS120 YPT1 HNM1 MRS11 FLX1 SYS1 ATP7 YKT6 GSP1 VPS33 TOM37 SEC14 VTI1 CIK1 NCE103 TOM70 TOM22 NPR1 SRP1 SEC21 ARC35 VPS21 NUP1 NOC2 SEC63 SEC23            31        494

 

 

 

MIPS Phenotypes

Category          p-value In Category from Cluster          k          f

 

 

 

MIPS Subcellular Localization

Category          p-value In Category from Cluster          k          f

mitochondria     0.000443609   ACS1 MRPL16 YBL064C MRPS9 STF1 LYS4 MRP20 MRPL28 CHO1 COX15 LPD1 MRS11 COX6 FLX1 ATP7 MSS51 MRPL39 TOM37 IDH1 TOM70 TOM22 YNL213C LAG2 LSC1       24            388

 

 

 

MIPS Protein Complexes

Category          p-value In Category from Cluster          k          f

 

 

 

MIPS Protein Classes

Category          p-value In Category from Cluster          k          f

 

 

 

GO Molecular Function

Category          p-value In Category from Cluster          k          f

 

 

 

GO Biological Process

Category          p-value In Category from Cluster          k          f

cell growth and/or maintenance [GO:0008151] 1.66668e-06    ERV46 PTA1 ACS1 SLA1 MRPL16 URA7 PTC3 KIP1 YBL064C RPL4A UBP14 TSC3 CMD1 ALG1 MRPS9 YSY6 SSE2 PAF1 BSD2 RRP7 THR4 HCM1 RPP1A NUP84 STF1 SSB1 REG1 EBS1 LYS4 GCN2 EFT2 RPT3 RPB7 MRP20 TRS120 MRPL28 SPP41 CHO1 PTC2 TRP2 GLO3 YCK3 COX15 SPT2 SMX2 LPD1 TUB2 YPT1 PNC1 HNM1 MLC1 IME4 HOS2 "ADE5,7" MTO1 MUQ1 SPR3 BGL2 WSC4 MRS11 COX6 GIC1 SSZ1 RRP3 SSF1 SAE3 YHR116W RHR2 FLX1 SYS1 CCT7 KRE9 SWI3 NTA1 RPA12 BIR1 ECM17 PUT3 ATP7 RAM2 SPT23 ABF1 RAD27 EBP2 CNB1 YKT6 UBA1 SET3 RPS21A HBS1 SOF1 PUF3 SPT8 ERG3 MSS51 GSP1 CDC3 CHS5 VPS33 SKI2 RPN13 MRPL39 TOM37 RNA14 CTF18 SEC14 VTI1 CIK1 NIP1 IDH1 TOM70 TOM22 NPR1 SRP1 SEC21 ARC35 ARG1 MDM20 BRX1 NDJ1 MSN1 VPS21 NUP1 KTR1 RPO31 RPT5 LSC1 MDM32 RPS28A GLN4 TOA1 SLK19 NPT1 RPB10 SAS5 SEC63 RPN8 SEC23 SMX3 139      3657

protein metabolism [GO:0019538]        4.41388e-06    ERV46 MRPL16 PTC3 RPL4A UBP14 ALG1 MRPS9 YSY6 SSE2 BSD2 RPP1A NUP84 SSB1 GCN2 EFT2 RPT3 MRP20 TRS120 MRPL28 PTC2 GLO3 YCK3 COX15 YPT1 HOS2 MTO1 MRS11 SSZ1 SYS1 CCT7 NTA1 RAM2 YKT6 UBA1 SET3 RPS21A HBS1 SPT8 MSS51 CHS5 VPS33 SKI2 RPN13 MRPL39 TOM37 SEC14 VTI1 NIP1 TOM70 TOM22 SEC21 VPS21 NUP1 KTR1 RPT5 RPS28A GLN4 SEC63 RPN8 SEC23            60        1168

metabolism [GO:0008152]       4.92952e-06    ERV46 PTA1 ACS1 MRPL16 URA7 PTC3 RPL4A UBP14 TSC3 ALG1 MRPS9 YSY6 SSE2 PAF1 BSD2 RRP7 THR4 HCM1 RPP1A NUP84 SSB1 REG1 LYS4 GCN2 EFT2 RPT3 RPB7 MRP20 TRS120 MRPL28 SPP41 CHO1 PTC2 TRP2 GLO3 YCK3 COX15 SPT2 SMX2 LPD1 YPT1 PNC1 IME4 HOS2 "ADE5,7" MTO1 MUQ1 MRS11 COX6 SSZ1 RRP3 SAE3 YHR116W RHR2 SYS1 CCT7 KRE9 SWI3 NTA1 RPA12 ECM17 PUT3 RAM2 SPT23 ABF1 RAD27 EBP2 YKT6 UBA1 SET3 RPS21A HBS1 SOF1 PUF3 SPT8 ERG3 MSS51 GSP1 CHS5 VPS33 SKI2 RPN13 MRPL39 TOM37 RNA14 SEC14 VTI1 NIP1 IDH1 TOM70 TOM22 NPR1 SEC21 ARG1 VPS21 NUP1 KTR1 RPO31 RPT5 LSC1 RPS28A GLN4 TOA1 NPT1 RPB10 SAS5 SEC63 RPN8 SEC23 SMX3 110      2693

 

 

 

GO Cellular Component

Category          p-value In Category from Cluster          k          f

intracellular [GO:0005622]       9.89973e-07    ERV46 PTA1 ACS1 SLA1 MRPL16 URA7 KIP1 YBL064C RPL4A CMD1 MRPS9 SSE2 PAF1 BSD2 HCM1 RPP1A NUP84 STF1 YDL193W SSB1 REG1 EBS1 LYS4 GCN2 EFT2 RPT3 RPB7 MRP20 TRS120 MRPL28 CHO1 GLO3 YCK3 COX15 SPT2 SMX2 LPD1 TUB2 YPT1 HNM1 MLC1 HOS2 "ADE5,7" MTO1 SPR3 MRS11 COX6 GIC1 SSZ1 RRP3 SSF1 YHR115C FLX1 SYS1 CCT7 SWI3 RPA12 BIR1 PUT3 ATP7 RAM2 SPT23 ABF1 RAD27 EBP2 CNB1 UBA1 SET3 YKR046C RPS21A SOF1 SPT8 ERG3 GSP1 CDC3 CHS5 VPS33 SKI2 RPN13 MRPL39 TOM37 RNA14 CTF18 SEC14 VTI1 CIK1 NIP1 NCE103 IDH1 TOM70 TOM22 NPR1 SRP1 SEC21 ARC35 ARG1 MDM20 BRX1 NDJ1 MSN1 VPS21 NUP1 KTR1 RPO31 RPT5 LSC1 YOR145C RPS28A GLN4 TOA1 SLK19 NOC2 NPT1 RPB10 SAS5 SEC63 RPN8 SEC23 SMX3 119            2921

cell [GO:0005623]       2.71283e-06    ERV46 PTA1 ACS1 SLA1 MRPL16 URA7 KIP1 YBL064C RPL4A TSC3 CMD1 MRPS9 SSE2 PAF1 BSD2 HCM1 RPP1A NUP84 STF1 YDL193W SSB1 REG1 EBS1 LYS4 GCN2 EFT2 RPT3 RPB7 MRP20 TRS120 MRPL28 CHO1 GLO3 YCK3 COX15 SPT2 SMX2 LPD1 TUB2 YPT1 HNM1 MLC1 HOS2 "ADE5,7" MTO1 SPR3 WSC4 MRS11 COX6 GIC1 SSZ1 RRP3 SSF1 YHR115C FLX1 SYS1 CCT7 SWI3 RPA12 BIR1 PUT3 ATP7 RAM2 SPT23 ABF1 RAD27 EBP2 CNB1 YKT6 UBA1 SET3 YKR046C RPS21A SOF1 SPT8 ERG3 GSP1 CDC3 CHS5 VPS33 SKI2 RPN13 MRPL39 TOM37 RNA14 CTF18 SEC14 VTI1 CIK1 NIP1 NCE103 IDH1 DBP2 TOM70 TOM22 NPR1 SRP1 SEC21 ARC35 ARG1 MDM20 BRX1 NDJ1 MSN1 VPS21 NUP1 KTR1 RPO31 RPT5 LSC1 YOR145C RPS28A GLN4 TOA1 SLK19 NOC2 NPT1 RPB10 SAS5 SEC63 RPN8 SEC23 SMX3   123      3106

cytoplasm [GO:0005737]         1.08126e-05    ERV46 ACS1 SLA1 MRPL16 URA7 KIP1 YBL064C RPL4A CMD1 MRPS9 SSE2 BSD2 RPP1A STF1 YDL193W SSB1 REG1 LYS4 GCN2 EFT2 RPT3 MRP20 TRS120 MRPL28 CHO1 GLO3 COX15 LPD1 TUB2 YPT1 MLC1 "ADE5,7" MTO1 SPR3 MRS11 COX6 GIC1 SSZ1 YHR115C FLX1 SYS1 CCT7 ATP7 RAM2 SPT23 CNB1 UBA1 YKR046C RPS21A ERG3 CDC3 CHS5 VPS33 SKI2 RPN13 MRPL39 TOM37 SEC14 VTI1 CIK1 NIP1 NCE103 IDH1 TOM70 TOM22 NPR1 SRP1 SEC21 ARC35 ARG1 MDM20 VPS21 KTR1 RPT5 LSC1 YOR145C RPS28A GLN4 SEC63 RPN8 SEC23        81        1810

 

 

 

SMART Domains

Category          p-value In Category from Cluster          k          f

 

 

 

PFam-A Domains

Category          p-value In Category from Cluster          k          f

 

 

 

Yeast Two Hybrid - Uetz

Category          p-value In Category from Cluster          k          f

 

 

 

Yeast Two Hybrid - Ito (core)

Category          p-value In Category from Cluster          k          f

 

 

 

Yeast Two Hybrid - Ito (full)

Category          p-value In Category from Cluster          k          f

 

 

 

Synthetic Genetic Array Analysis

Category          p-value In Category from Cluster          k          f

 

 

 

MDS Proteomics Complexes

Category          p-value In Category from Cluster          k          f

 

 

 

Cellzome Complexes

Category          p-value In Category from Cluster          k          f

YBL039C (URA7)      0.000100998   URA7 RPT3 YKT6 RPT5 RPN8        5          17

 

 

 

Proteome Localization--Observed

Category          p-value In Category from Cluster          k          f

other    0.000557064   PTA1 YAL053W SLA1 YBL064C SSE2 RPT3 TUB2 YJL123C ARC35 SLK19     10        97

 

 

 

Proteome Localization--Predicted+Observed

Category          p-value In Category from Cluster          k          f

 

 

 

Deletions Consortium (Essentiality, Morphology)

Category          p-value In Category from Cluster          k          f

essential            0.00273014     PTA1 CMD1 ALG1 RRP7 YDL193W RPT3 RPB7 TRS120 SPP41 TUB2 YPT1 MRS11 RRP3 CCT7 KRE9 YKL014C RAM2 ABF1 EBP2 YKL195W YKT6 UBA1 SOF1 CDC3 RNA14 SEC14 VTI1 NIP1 DBP2 TOM22 SRP1 SEC21 ARC35 YOL026C BRX1 NUP1 RPO31 RPT5 YOR145C GLN4 TOA1 NOC2 RPB10 SEC63 RPN8 YOR262W SEC23 SMX3       48        1101

 

 

 

Yeast Fitness Data

Category          p-value In Category from Cluster          k          f

Slow Growers  0.00222899     URA7 DEM1 PAF1 HCM1 RPP1A NUP84 REG1 VID21 MRP20 GLO3 COX15 LPD1 RMD9 SSZ1 FLX1 COX16 SWI3 RPA12 ATP7 RAD27 ERG3 VPS33 TOM37 SOV1 CTF18 IDH1 YNL119W TOM70 MDM20 YOR205C NPT1         31        617

 

 

 

Published Complexes

Category          p-value In Category from Cluster          k          f


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Abf1-PBM-exact.FunSpec.txt

Input Cluster (n=24)

YBL038W       MRPL16

YBL039C        URA7

YCL031C        RRP7

YDR283C       GCN2

YDR394W      RPT3

YDR407C       TRS120

YER161C        SPT2

YGL192W       IME4

YGL194C        HOS2

YGR007W      MUQ1

YHR005C-A   MRS11

YKL195W

YKL196C       YKT6

YKR084C       HBS1

YLR398C        SKI2

YOL116W      MSN1

YOR145C

YOR147W      MDM32

YOR205C

YOR206W      NOC2

YOR209C       NPT1

YOR210W      RPB10

YOR261C       RPN8

YOR262W

 

Genes Not Found:

 

MIPS Functional Classification

Category          p-value In Category from Cluster          k          f

 

 

 

MIPS Phenotypes

Category          p-value In Category from Cluster          k          f

 

 

 

MIPS Subcellular Localization

Category          p-value In Category from Cluster          k          f

 

 

 

MIPS Protein Complexes

Category          p-value In Category from Cluster          k          f

 

 

 

MIPS Protein Classes

Category          p-value In Category from Cluster          k          f

 

 

 

GO Molecular Function

Category          p-value In Category from Cluster          k          f

 

 

 

GO Biological Process

Category          p-value In Category from Cluster          k          f

 

 

 

GO Cellular Component

Category          p-value In Category from Cluster          k          f

 

 

 

SMART Domains

Category          p-value In Category from Cluster          k          f

 

 

 

PFam-A Domains

Category          p-value In Category from Cluster          k          f

 

 

 

Yeast Two Hybrid - Uetz

Category          p-value In Category from Cluster          k          f

 

 

 

Yeast Two Hybrid - Ito (core)

Category          p-value In Category from Cluster          k          f

 

 

 

Yeast Two Hybrid - Ito (full)

Category          p-value In Category from Cluster          k          f

 

 

 

Synthetic Genetic Array Analysis

Category          p-value In Category from Cluster          k          f

 

 

 

MDS Proteomics Complexes

Category          p-value In Category from Cluster          k          f

 

 

 

Cellzome Complexes

Category          p-value In Category from Cluster          k          f

YBL039C (URA7)      3.8097e-07      URA7 RPT3 YKT6 RPN8      4          17

YGR090W (UTP22)    5.39156e-05    RRP7 YOR145C NOC2         3          20

 

 

 

Proteome Localization--Observed

Category          p-value In Category from Cluster          k          f

 

 

 

Proteome Localization--Predicted+Observed

Category          p-value In Category from Cluster          k          f

 

 

 

Deletions Consortium (Essentiality, Morphology)

Category          p-value In Category from Cluster          k          f

essential            0.00125124     RRP7 RPT3 TRS120 MRS11 YKL195W YKT6 YOR145C NOC2 RPB10 RPN8 YOR262W      11        1101

 

 

 

Yeast Fitness Data

Category          p-value In Category from Cluster          k          f

 

 

 

Published Complexes

Category          p-value In Category from Cluster          k          f


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Abf1-ChIP-alldata.FunSpec.txt

Input Cluster (n=260)

YAL023C        PMT2

YAL041W       CDC24

YAL042W       ERV46

YAL043C        PTA1

YAL053W

YAL054C        ACS1

YBL007C        SLA1

YBL038W       MRPL16

YBL039C        URA7

YBL079W       NUP170

YBL080C        PET112

YBR011C        IPP1

YBR029C        CDS1

YBR030W

YBR077C

YBR078W       ECM33

YBR080C        SEC18

YBR101C

YBR109C        CMD1

YBR110W       ALG1

YBR129C        OPY1

YBR146W       MRPS9

YBR211C        AME1

YBR212W       NGR1

YBR283C        SSH1

YBR284W

YCL011C        GBP2

YCL031C        RRP7

YCR053W      THR4

YCR082W

YDL010W

YDL012C

YDL035C        GPR1

YDL105W       QRI2

YDL106C        PHO2

YDL116W       NUP84

YDL122W       UBP1

YDL130W-A  STF1

YDL145C        COP1

YDL159W       STE7

YDL159W-A

YDL160C        DHH1

YDL189W       RBS1

YDL190C        UFD2

YDL193W

YDL208W       NHP2

YDL209C        CWC2

YDR028C       REG1

YDR130C       FIN1

YDR194C       MSS116

YDR195W      REF2

YDR233C       RTN1

YDR234W      LYS4

YDR245W      MNN10

YDR280W      RRP45

YDR283C       GCN2

YDR295C       PLO2

YDR296W      MHR1

YDR312W      SSF2

YDR326C

YDR329C       PEX3

YDR330W

YDR339C

YDR361C       BCP1

YDR363W-A  SEM1

YDR384C       ATO3

YDR385W      EFT2

YDR404C       RPB7

YDR405W      MRP20

YDR422C       SIP1

YDR454C       GUK1

YDR456W      NHX1

YDR463W      STP1

YEL017C-A    PMP2

YEL017W

YEL037C        RAD23

YFL017W-A   SMX2

YFL018C        LPD1

YFL047W       RGD2

YFL048C        EMP47

YGL106W       MLC1

YGL107C        RMD9

YGL192W       IME4

YGL194C        HOS2

YGL195W       GCN1

YGL222C        EDC1

YGL228W       SHE10

YGL229C        SAP4

YGR056W      RSC1

YGR059W      SPR3

YGR119C       NUP57

YGR128C       UTP8

YGR129W      SYF2

YGR183C       QCR9

YGR185C       TYS1

YGR186W      TFG1

YGR231C       PHB2

YGR232W      NAS6

YGR253C       PUP2

YGR254W      ENO1

YGR268C

YGR270W      YTA7

YHL027W       RIM101

YHL028W       WSC4

YHL029C

YHR051W      COX6

YHR064C       SSZ1

YHR077C       NMD2

YHR078W

YHR090C       YNG2

YHR115C

YHR116W

YHR161C       YAP1801

YHR162W

YHR199C

YHR200W      RPN10

YIL031W        ULP2

YIL033C         BCY1

YIL036W        CST6

YIL037C         PRM2

YIL048W        NEO1

YIL134W        FLX1

YIL135C

YIL138C         TPM2

YIR010W        DSN1

YIR023W        DAL81

YJL008C         CCT8

YJL062W        LAS21

YJL062W-A

YJL063C         MRPL8

YJL111W        CCT7

YJL174W        KRE9

YJL176C         SWI3

YJL183W        MNN11

YJL201W        ECM25

YJR062C         NTA1

YJR063W        RPA12

YJR093C         FIP1

YJR116W

YJR127C         ZMS1

YJR137C         ECM17

YJR138W        IML1

YKL004W      AUR1

YKL005C

YKL007W      CAP1

YKL008C       LAC1

YKL014C

YKL015W      PUT3

YKL016C       ATP7

YKL028W      TFA1

YKL029C       MAE1

YKL060C       FBA1

YKL078W      DHR2

YKL135C       APL2

YKL143W      LTV1

YKL144C       RPC25

YKL167C       MRP49

YKL172W      EBP2

YKL190W      CNB1

YKL195W

YKL196C       YKT6

YKR029C       SET3

YKR030W      MSG1

YKR056W      TRM2

YKR059W      TIF1

YKR081C       RPF2

YKR082W      NUP133

YLL033W

YLL034C

YLR024C        UBR2

YLR025W       SNF7

YLR055C        SPT8

YLR056W       ERG3

YLR095C        IOC2

YLR096W       KIN2

YLR174W       IDP2

YLR222C        UTP13

YLR229C        CDC42

YLR293C        GSP1

YLR330W       CHS5

YLR396C        VPS33

YLR399C        BDF1

YML012W      ERV25

YML081C-A   ATP18

YML081W

YMR005W      TAF4

YMR033W      ARP9

YMR060C       TOM37

YMR061W      RNA14

YMR092C       AIP1

YMR093W      UTP15

YMR129W      POM152

YMR197C       VTI1

YMR198W      CIK1

YMR200W      ROT1

YMR260C       TIF11

YMR296C       LCB1

YMR297W      PRC1

YNL036W      NCE103

YNL037C       IDH1

YNL059C       ARP5

YNL085W      MKT1

YNL116W

YNL117W      MLS1

YNL118C       DCP2

YNL119W

YNL121C       TOM70

YNL149C

YNL183C       NPR1

YNL189W      SRP1

YNL212W      VID27

YNL213C

YNL243W      SLA2

YNL244C       SUI1

YNL255C       GIS2

YNL258C       DSL1

YNL267W      PIK1

YNL287W      SEC21

YNL306W      MRPS18

YNL307C       MCK1

YNL312W      RFA2

YNL313C

YNL321W

YNL322C       KRE1

YNR036C

YNR037C       RSM19

YNR038W      DBP6

YNR046W

YOL036W

YOL068C       HST1

YOL076W      MDM20

YOL077C       BRX1

YOL116W      MSN1

YOR045W      TOM6

YOR056C       NOB1

YOR057W      SGT1

YOR116C       RPO31

YOR117W      RPT5

YOR205C

YOR206W      NOC2

YOR261C       RPN8

YOR262W

YOR310C       NOP58

YPL012W       RRP12

YPL013C

YPL036W       PMA2

YPL037C        EGD1

YPL159C

YPL228W       CET1

YPL232W       SSO1

YPL242C        IQG1

YPR017C        DSS4

YPR018W       RLF2

YPR104C        FHL1

YPR128C        ANT1

YPR129W       SCD6

YPR176C        BET2

YPR178W       PRP4

YPR186C        PZF1

YPR187W       RPO26

 

Genes Not Found:

 

SNR14

SNR3

SNR55

SNR57

SNR61

SNR68

TM%28CAU%29J2

YBR012W-A

YBR012W-B

YDR194W-A

YHR050W-A

YIL134C-A

MIPS Functional Classification

Category          p-value In Category from Cluster          k          f

SUBCELLULAR LOCALISATION   2.62571e-11    PMT2 CDC24 ERV46 PTA1 ACS1 SLA1 MRPL16 URA7 NUP170 PET112 IPP1 CDS1 SEC18 CMD1 ALG1 MRPS9 AME1 SSH1 GBP2 THR4 GPR1 PHO2 NUP84 UBP1 STF1 COP1 DHH1 NHP2 REG1 MSS116 REF2 RTN1 LYS4 MNN10 GCN2 PEX3 EFT2 RPB7 MRP20 NHX1 STP1 PMP2 RAD23 SMX2 LPD1 EMP47 IME4 GCN1 RSC1 SPR3 NUP57 QCR9 TYS1 TFG1 NAS6 PUP2 ENO1 YTA7 RIM101 COX6 NMD2 YNG2 YAP1801 RPN10 BCY1 FLX1 TPM2 DAL81 CCT8 LAS21 MRPL8 CCT7 KRE9 SWI3 NTA1 RPA12 FIP1 YKL005C CAP1 PUT3 ATP7 TFA1 MAE1 FBA1 APL2 RPC25 MRP49 CNB1 YKT6 TRM2 TIF1 NUP133 SNF7 SPT8 ERG3 KIN2 IDP2 CDC42 GSP1 CHS5 VPS33 BDF1 ERV25 ATP18 ARP9 TOM37 RNA14 AIP1 POM152 VTI1 CIK1 TIF11 PRC1 IDH1 ARP5 MLS1 TOM70 SRP1 YNL213C SLA2 SUI1 PIK1 SEC21 MRPS18 RFA2 KRE1 DBP6 MDM20 MSN1 TOM6 RPO31 RPT5 RPN8 NOP58 YPL013C PMA2 EGD1 SSO1 IQG1 DSS4 RLF2 FHL1 PRP4 PZF1 RPO26   145      2256

nucleus 3.01944e-05    CDC24 PTA1 NUP170 GBP2 PHO2 NUP84 DHH1 NHP2 REG1 REF2 RPB7 STP1 RAD23 SMX2 IME4 RSC1 NUP57 TFG1 NAS6 PUP2 YTA7 RIM101 YNG2 RPN10 DAL81 SWI3 RPA12 FIP1 YKL005C PUT3 TFA1 RPC25 TRM2 NUP133 SPT8 GSP1 BDF1 RNA14 POM152 ARP5 SRP1 PIK1 RFA2 DBP6 MSN1 RPO31 RPT5 RPN8 NOP58 EGD1 RLF2 FHL1 PRP4 PZF1 RPO26           55        774

 

 

 

MIPS Phenotypes

Category          p-value In Category from Cluster          k          f

Cell morphology and organelle mutants  4.86826e-06    PMT2 CDC24 ACS1 SLA1 URA7 ECM33 SEC18 CMD1 AME1 NUP84 COP1 REG1 REF2 MNN10 PEX3 SEM1 RAD23 MLC1 PUP2 RIM101 ULP2 LAS21 KRE9 ECM25 ECM17 AUR1 CAP1 CNB1 YKT6 NUP133 CDC42 CHS5 VPS33 BDF1 ERV25 ATP18 VTI1 SLA2 SEC21 MCK1 KRE1 MDM20 MSN1 IQG1 44        530

Conditional phenotypes 7.14833e-05    CDC24 SLA1 NUP170 NGR1 NUP84 COP1 DHH1 REG1 REF2 MNN10 GCN2 SEM1 GUK1 RSC1 RIM101 COX6 SSZ1 ULP2 BCY1 KRE9 FIP1 TFA1 MRP49 NUP133 SNF7 CDC42 VPS33 BDF1 SRP1 SLA2 SEC21 MCK1 RFA2 DBP6 YOL036W MDM20 NOP58 PMA2 IQG1 FHL1 PRP4    41            535

 

 

 

MIPS Subcellular Localization

Category          p-value In Category from Cluster          k          f

nucleus 0.000132815   CDC24 NUP170 GBP2 PHO2 NUP84 DHH1 NHP2 REG1 REF2 RPB7 STP1 RAD23 SMX2 IME4 NUP57 SYF2 TFG1 NAS6 PUP2 YTA7 RIM101 YNG2 RPN10 ULP2 DAL81 SWI3 RPA12 FIP1 YKL005C PUT3 TFA1 RPC25 TRM2 NUP133 SPT8 GSP1 BDF1 RNA14 POM152 ARP5 SRP1 PIK1 RFA2 DBP6 MSN1 RPO31 RPT5 NOC2 RPN8 NOP58 CET1 RLF2 FHL1 PRP4 PZF1 RPO26            56        836

 

 

 

MIPS Protein Complexes

Category          p-value In Category from Cluster          k          f

 

 

 

MIPS Protein Classes

Category          p-value In Category from Cluster          k          f

 

 

 

GO Molecular Function

Category          p-value In Category from Cluster          k          f

 

 

 

GO Biological Process

Category          p-value In Category from Cluster          k          f

cell growth and/or maintenance [GO:0008151] 3.35504e-07    PMT2 CDC24 ERV46 PTA1 ACS1 SLA1 MRPL16 URA7 NUP170 PET112 CDS1 ECM33 SEC18 CMD1 ALG1 OPY1 MRPS9 AME1 SSH1 RRP7 THR4 GPR1 PHO2 NUP84 UBP1 STF1 COP1 STE7 DHH1 UFD2 NHP2 CWC2 REG1 MSS116 REF2 LYS4 MNN10 RRP45 GCN2 MHR1 SSF2 PEX3 SEM1 EFT2 RPB7 MRP20 SIP1 GUK1 NHX1 STP1 PMP2 RAD23 SMX2 LPD1 EMP47 MLC1 IME4 HOS2 GCN1 EDC1 SAP4 RSC1 SPR3 NUP57 UTP8 SYF2 QCR9 TFG1 PHB2 NAS6 PUP2 ENO1 YTA7 RIM101 WSC4 COX6 SSZ1 NMD2 YNG2 YHR116W YAP1801 RPN10 ULP2 BCY1 CST6 PRM2 NEO1 FLX1 TPM2 DSN1 DAL81 CCT8 LAS21 MRPL8 CCT7 KRE9 SWI3 MNN11 ECM25 NTA1 RPA12 FIP1 ECM17 AUR1 CAP1 PUT3 ATP7 TFA1 MAE1 FBA1 DHR2 APL2 LTV1 RPC25 MRP49 EBP2 CNB1 YKT6 SET3 TRM2 TIF1 RPF2 NUP133 UBR2 SNF7 SPT8 ERG3 IDP2 UTP13 CDC42 GSP1 CHS5 VPS33 BDF1 ERV25 ATP18 TAF4 ARP9 TOM37 RNA14 AIP1 UTP15 POM152 VTI1 CIK1 ROT1 TIF11 LCB1 PRC1 IDH1 ARP5 MLS1 DCP2 TOM70 NPR1 SRP1 SLA2 SUI1 PIK1 SEC21 MRPS18 MCK1 RFA2 KRE1 RSM19 DBP6 HST1 MDM20 BRX1 MSN1 TOM6 NOB1 SGT1 RPO31 RPT5 RPN8 NOP58 RRP12 PMA2 EGD1 CET1 SSO1 IQG1 DSS4 FHL1 ANT1 BET2 PRP4 PZF1 RPO26        190      3657

cell organization and biogenesis [GO:0016043] 1.22691e-06    CDC24 SLA1 NUP170 PET112 ECM33 SEC18 CMD1 AME1 RRP7 NUP84 NHP2 MNN10 RRP45 MHR1 SSF2 PEX3 NHX1 MLC1 HOS2 RSC1 SPR3 NUP57 UTP8 WSC4 YNG2 TPM2 CCT8 MRPL8 CCT7 KRE9 SWI3 ECM25 ECM17 CAP1 DHR2 EBP2 CNB1 SET3 RPF2 NUP133 SNF7 SPT8 UTP13 CDC42 GSP1 VPS33 ARP9 TOM37 AIP1 UTP15 POM152 VTI1 CIK1 ROT1 PRC1 ARP5 TOM70 SLA2 KRE1 DBP6 MDM20 BRX1 TOM6 NOP58 RRP12 IQG1 FHL1 ANT1       68        939

metabolism [GO:0008152]       8.68966e-06    PMT2 CDC24 ERV46 PTA1 ACS1 MRPL16 URA7 NUP170 PET112 CDS1 SEC18 ALG1 MRPS9 SSH1 RRP7 THR4 PHO2 NUP84 UBP1 COP1 STE7 DHH1 UFD2 NHP2 CWC2 REG1 MSS116 REF2 LYS4 MNN10 RRP45 GCN2 PEX3 EFT2 RPB7 MRP20 SIP1 GUK1 STP1 RAD23 SMX2 LPD1 EMP47 IME4 HOS2 GCN1 EDC1 RSC1 NUP57 UTP8 SYF2 QCR9 TFG1 PHB2 NAS6 PUP2 ENO1 YTA7 RIM101 COX6 SSZ1 NMD2 YNG2 YHR116W RPN10 ULP2 CST6 TPM2 DAL81 CCT8 LAS21 MRPL8 CCT7 KRE9 SWI3 MNN11 NTA1 RPA12 FIP1 ECM17 AUR1 PUT3 TFA1 MAE1 FBA1 RPC25 MRP49 EBP2 YKT6 SET3 TRM2 TIF1 NUP133 UBR2 SPT8 ERG3 IDP2 UTP13 CDC42 GSP1 CHS5 VPS33 ERV25 TAF4 ARP9 TOM37 RNA14 UTP15 POM152 VTI1 TIF11 LCB1 PRC1 IDH1 ARP5 MLS1 DCP2 TOM70 NPR1 SLA2 SUI1 PIK1 SEC21 MRPS18 MCK1 RFA2 RSM19 DBP6 HST1 TOM6 NOB1 RPO31 RPT5 RPN8 NOP58 RRP12 EGD1 CET1 SSO1 DSS4 FHL1 ANT1 BET2 PRP4 PZF1 RPO26 146      2693

RNA metabolism [GO:0016070]          2.96563e-05    PTA1 RRP7 DHH1 NHP2 CWC2 MSS116 REF2 RRP45 STP1 SMX2 IME4 EDC1 UTP8 SYF2 NMD2 FIP1 EBP2 TRM2 UTP13 GSP1 RNA14 UTP15 DCP2 DBP6 NOP58 RRP12 CET1 FHL1 PRP4      29        311

 

 

 

GO Cellular Component

Category          p-value In Category from Cluster          k          f

intracellular [GO:0005622]       3.77083e-10    PMT2 CDC24 ERV46 PTA1 ACS1 SLA1 MRPL16 URA7 NUP170 PET112 CDS1 YBR077C SEC18 CMD1 MRPS9 NGR1 SSH1 GBP2 GPR1 NUP84 UBP1 STF1 COP1 STE7 DHH1 YDL193W NHP2 CWC2 REG1 FIN1 MSS116 LYS4 MNN10 RRP45 GCN2 MHR1 SSF2 PEX3 EFT2 RPB7 MRP20 SIP1 NHX1 STP1 RAD23 SMX2 LPD1 EMP47 MLC1 HOS2 GCN1 SAP4 RSC1 SPR3 NUP57 UTP8 SYF2 QCR9 TYS1 TFG1 PHB2 NAS6 PUP2 ENO1 YGR268C COX6 SSZ1 NMD2 YNG2 YHR115C YAP1801 RPN10 ULP2 BCY1 CST6 FLX1 TPM2 DSN1 DAL81 CCT8 LAS21 MRPL8 CCT7 SWI3 MNN11 RPA12 FIP1 AUR1 CAP1 LAC1 PUT3 ATP7 TFA1 MAE1 FBA1 DHR2 APL2 RPC25 MRP49 EBP2 CNB1 SET3 TIF1 RPF2 NUP133 SNF7 SPT8 ERG3 IDP2 UTP13 CDC42 GSP1 CHS5 VPS33 BDF1 ERV25 ATP18 TAF4 ARP9 TOM37 RNA14 AIP1 UTP15 POM152 VTI1 CIK1 TIF11 LCB1 PRC1 NCE103 IDH1 ARP5 MLS1 DCP2 TOM70 NPR1 SRP1 SLA2 SUI1 DSL1 PIK1 SEC21 MRPS18 RFA2 RSM19 DBP6 HST1 MDM20 BRX1 MSN1 TOM6 NOB1 SGT1 RPO31 RPT5 NOC2 RPN8 NOP58 RRP12 PMA2 EGD1 CET1 SSO1 IQG1 RLF2 FHL1 ANT1 PRP4 PZF1 RPO26            170      2921

cell [GO:0005623]       5.44564e-10    PMT2 CDC24 ERV46 PTA1 ACS1 SLA1 MRPL16 URA7 NUP170 PET112 CDS1 YBR077C SEC18 CMD1 MRPS9 NGR1 SSH1 GBP2 GPR1 NUP84 UBP1 STF1 COP1 STE7 DHH1 YDL193W NHP2 CWC2 REG1 FIN1 MSS116 LYS4 MNN10 RRP45 GCN2 MHR1 SSF2 PEX3 EFT2 RPB7 MRP20 SIP1 NHX1 STP1 PMP2 RAD23 SMX2 LPD1 EMP47 MLC1 HOS2 GCN1 SAP4 RSC1 SPR3 NUP57 UTP8 SYF2 QCR9 TYS1 TFG1 PHB2 NAS6 PUP2 ENO1 YGR268C WSC4 COX6 SSZ1 NMD2 YNG2 YHR115C YAP1801 RPN10 ULP2 BCY1 CST6 PRM2 FLX1 TPM2 DSN1 DAL81 CCT8 LAS21 MRPL8 CCT7 SWI3 MNN11 RPA12 FIP1 AUR1 CAP1 LAC1 PUT3 ATP7 TFA1 MAE1 FBA1 DHR2 APL2 RPC25 MRP49 EBP2 CNB1 YKT6 SET3 TIF1 RPF2 NUP133 SNF7 SPT8 ERG3 KIN2 IDP2 UTP13 CDC42 GSP1 CHS5 VPS33 BDF1 ERV25 ATP18 TAF4 ARP9 TOM37 RNA14 AIP1 UTP15 POM152 VTI1 CIK1 TIF11 LCB1 PRC1 NCE103 IDH1 ARP5 MLS1 DCP2 TOM70 NPR1 SRP1 SLA2 SUI1 DSL1 PIK1 SEC21 MRPS18 MCK1 RFA2 RSM19 DBP6 HST1 MDM20 BRX1 MSN1 TOM6 NOB1 SGT1 RPO31 RPT5 NOC2 RPN8 NOP58 RRP12 PMA2 EGD1 CET1 SSO1 IQG1 DSS4 RLF2 FHL1 ANT1 PRP4 PZF1 RPO26   177      3106

cytoplasm [GO:0005737]         1.02357e-05    PMT2 ERV46 ACS1 SLA1 MRPL16 URA7 PET112 CDS1 YBR077C SEC18 CMD1 MRPS9 NGR1 SSH1 UBP1 STF1 COP1 STE7 DHH1 YDL193W REG1 MSS116 LYS4 MNN10 RRP45 GCN2 MHR1 PEX3 EFT2 MRP20 SIP1 NHX1 LPD1 EMP47 MLC1 GCN1 SAP4 SPR3 QCR9 TYS1 PHB2 NAS6 PUP2 ENO1 YGR268C COX6 SSZ1 NMD2 YHR115C YAP1801 RPN10 BCY1 FLX1 TPM2 DSN1 CCT8 LAS21 MRPL8 CCT7 MNN11 AUR1 CAP1 LAC1 ATP7 MAE1 FBA1 APL2 MRP49 CNB1 TIF1 SNF7 ERG3 IDP2 CHS5 VPS33 ERV25 ATP18 TOM37 AIP1 VTI1 CIK1 TIF11 LCB1 PRC1 NCE103 IDH1 MLS1 DCP2 TOM70 NPR1 SRP1 SLA2 SUI1 DSL1 PIK1 SEC21 MRPS18 RSM19 MDM20 TOM6 NOB1 RPT5 RPN8 RRP12 EGD1 IQG1 ANT1     107      1810

nucleus [GO:0005634] 5.48296e-05    CDC24 PTA1 NUP170 GBP2 NUP84 NHP2 CWC2 FIN1 RRP45 MHR1 SSF2 RPB7 STP1 RAD23 SMX2 HOS2 RSC1 NUP57 UTP8 SYF2 TYS1 TFG1 YNG2 ULP2 BCY1 CST6 DAL81 SWI3 RPA12 FIP1 PUT3 TFA1 DHR2 RPC25 EBP2 SET3 RPF2 NUP133 SPT8 UTP13 GSP1 BDF1 TAF4 ARP9 RNA14 AIP1 UTP15 POM152 ARP5 DCP2 SRP1 PIK1 RFA2 DBP6 HST1 BRX1 MSN1 RPO31 NOC2 NOP58 CET1 RLF2 FHL1 PRP4 PZF1 RPO26          66        1007

 

 

 

SMART Domains

Category          p-value In Category from Cluster          k          f

 

 

 

PFam-A Domains

Category          p-value In Category from Cluster          k          f

 

 

 

Yeast Two Hybrid - Uetz

Category          p-value In Category from Cluster          k          f

 

 

 

Yeast Two Hybrid - Ito (core)

Category          p-value In Category from Cluster          k          f

 

 

 

Yeast Two Hybrid - Ito (full)

Category          p-value In Category from Cluster          k          f

 

 

 

Synthetic Genetic Array Analysis

Category          p-value In Category from Cluster          k          f

 

 

 

MDS Proteomics Complexes

Category          p-value In Category from Cluster          k          f

 

 

 

Cellzome Complexes

Category          p-value In Category from Cluster          k          f

YBL039C (URA7)      4.04886e-05    URA7 RPN10 YKT6 TIF1 RPT5 RPN8         6          17

 

 

 

Proteome Localization--Observed

Category          p-value In Category from Cluster          k          f

 

 

 

Proteome Localization--Predicted+Observed

Category          p-value In Category from Cluster          k          f

nuc       0.00269571     SLA1 NUP170 PET112 CDS1 CMD1 AME1 RRP7 YCR082W QRI2 PHO2 NUP84 DHH1 NHP2 CWC2 REG1 REF2 PLO2 YDR339C BCP1 RPB7 STP1 RMD9 IME4 HOS2 EDC1 SAP4 NUP57 UTP8 SYF2 TFG1 RIM101 YNG2 CST6 YIL135C DAL81 SWI3 ECM25 RPA12 FIP1 IML1 YKL005C YKL014C PUT3 TFA1 DHR2 RPC25 SET3 TRM2 RPF2 SNF7 SPT8 IOC2 GSP1 BDF1 TAF4 RNA14 AIP1 UTP15 DCP2 SRP1 GIS2 DSL1 PIK1 RFA2 DBP6 YOL036W MSN1 NOB1 RPO31 RPT5 NOC2 NOP58 EGD1 CET1 RLF2 FHL1 PRP4 PZF1 RPO26     79        1435

 

 

 

Deletions Consortium (Essentiality, Morphology)

Category          p-value In Category from Cluster          k          f

essential            3.37985e-08    CDC24 PTA1 IPP1 CDS1 SEC18 CMD1 ALG1 AME1 RRP7 QRI2 COP1 YDL193W NHP2 CWC2 RRP45 YDR339C BCP1 RPB7 GUK1 NUP57 UTP8 TYS1 TFG1 PUP2 ULP2 NEO1 DSN1 CCT8 CCT7 KRE9 FIP1 AUR1 YKL014C TFA1 FBA1 DHR2 RPC25 EBP2 YKL195W YKT6 RPF2 YLL034C UTP13 CDC42 TAF4 ARP9 RNA14 UTP15 VTI1 ROT1 TIF11 LCB1 DCP2 YNL149C SRP1 SUI1 DSL1 PIK1 SEC21 MRPS18 RFA2 YNL313C DBP6 YNR046W BRX1 NOB1 SGT1 RPO31 RPT5 NOC2 RPN8 YOR262W NOP58 RRP12 CET1 IQG1 FHL1 BET2 PRP4 PZF1 RPO26            81        1101

 

 

 

Yeast Fitness Data

Category          p-value In Category from Cluster          k          f

Slow Growers  0.00787606     PMT2 URA7 SSH1 PHO2 NUP84 DHH1 REG1 MSS116 REF2 MNN10 MHR1 SEM1 MRP20 STP1 LPD1 RMD9 RSC1 SSZ1 FLX1 LAS21 SWI3 MNN11 RPA12 ATP7 LTV1 NUP133 YLL033W ERG3 VPS33 BDF1 TOM37 IDH1 ARP5 YNL119W TOM70 YNR036C MDM20 YOR205C             38            617

 

 

 

Published Complexes

Category          p-value In Category from Cluster          k          f


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Abf1-ChIP-2SD.FunSpec.txt

 Input Cluster (n=183)

YAL041W       CDC24

YAL042W       ERV46

YAL043C        PTA1

YAL053W

YAL054C        ACS1

YBL007C        SLA1

YBL038W       MRPL16

YBL039C        URA7

YBL079W       NUP170

YBL080C        PET112

YBR011C        IPP1

YBR029C        CDS1

YBR030W

YBR077C

YBR078W       ECM33

YBR080C        SEC18

YBR109C        CMD1

YBR110W       ALG1

YBR129C        OPY1

YBR146W       MRPS9

YBR211C        AME1

YBR212W       NGR1

YCL031C        RRP7

YCR053W      THR4

YDL010W

YDL012C

YDL116W       NUP84

YDL130W-A  STF1

YDL145C        COP1

YDL159W       STE7

YDL159W-A

YDL160C        DHH1

YDL189W       RBS1

YDL190C        UFD2

YDL193W

YDR028C       REG1

YDR233C       RTN1

YDR234W      LYS4

YDR245W      MNN10

YDR283C       GCN2

YDR312W      SSF2

YDR326C

YDR384C       ATO3

YDR385W      EFT2

YDR404C       RPB7

YDR405W      MRP20

YDR422C       SIP1

YDR454C       GUK1

YDR456W      NHX1

YFL017W-A   SMX2

YFL018C        LPD1

YGL106W       MLC1

YGL107C        RMD9

YGL192W       IME4

YGL194C        HOS2

YGR056W      RSC1

YGR059W      SPR3

YGR119C       NUP57

YGR185C       TYS1

YGR186W      TFG1

YGR231C       PHB2

YGR232W      NAS6

YGR253C       PUP2

YGR254W      ENO1

YHL028W       WSC4

YHL029C

YHR051W      COX6

YHR064C       SSZ1

YHR115C

YHR116W

YHR161C       YAP1801

YHR162W

YHR199C

YHR200W      RPN10

YIL031W        ULP2

YIL033C         BCY1

YIL036W        CST6

YIL037C         PRM2

YIL048W        NEO1

YIL134W        FLX1

YIL135C

YIL138C         TPM2

YIR010W        DSN1

YIR023W        DAL81

YJL062W        LAS21

YJL062W-A

YJL063C         MRPL8

YJL111W        CCT7

YJL174W        KRE9

YJL176C         SWI3

YJL183W        MNN11

YJR062C         NTA1

YJR063W        RPA12

YJR093C         FIP1

YJR137C         ECM17

YJR138W        IML1

YKL004W      AUR1

YKL005C

YKL014C

YKL015W      PUT3

YKL016C       ATP7

YKL028W      TFA1

YKL029C       MAE1

YKL078W      DHR2

YKL143W      LTV1

YKL144C       RPC25

YKL172W      EBP2

YKL190W      CNB1

YKL195W

YKL196C       YKT6

YKR029C       SET3

YKR030W      MSG1

YKR059W      TIF1

YLL033W

YLL034C

YLR024C        UBR2

YLR025W       SNF7

YLR055C        SPT8

YLR056W       ERG3

YLR222C        UTP13

YLR293C        GSP1

YLR330W       CHS5

YLR396C        VPS33

YML081C-A   ATP18

YML081W

YMR005W      TAF4

YMR060C       TOM37

YMR061W      RNA14

YMR092C       AIP1

YMR093W      UTP15

YMR197C       VTI1

YMR198W      CIK1

YMR260C       TIF11

YNL036W      NCE103

YNL037C       IDH1

YNL059C       ARP5

YNL085W      MKT1

YNL116W

YNL117W      MLS1

YNL118C       DCP2

YNL119W

YNL121C       TOM70

YNL183C       NPR1

YNL189W      SRP1

YNL212W      VID27

YNL213C

YNL243W      SLA2

YNL244C       SUI1

YNL255C       GIS2

YNL258C       DSL1

YNL267W      PIK1

YNL287W      SEC21

YNL306W      MRPS18

YNL307C       MCK1

YNL312W      RFA2

YNL313C

YNL321W

YNL322C       KRE1

YNR036C

YNR037C       RSM19

YNR038W      DBP6

YOL036W

YOL076W      MDM20

YOL077C       BRX1

YOL116W      MSN1

YOR056C       NOB1

YOR057W      SGT1

YOR116C       RPO31

YOR117W      RPT5

YOR205C

YOR206W      NOC2

YOR261C       RPN8

YOR262W

YOR310C       NOP58

YPL012W       RRP12

YPL013C

YPL159C

YPL232W       SSO1

YPR017C        DSS4

YPR018W       RLF2

YPR104C        FHL1

YPR128C        ANT1

YPR129W       SCD6

 

Genes Not Found:

 

SNR68

YBR012W-A

YBR012W-B

YHR050W-A

YIL134C-A

MIPS Functional Classification

Category          p-value In Category from Cluster          k          f

SUBCELLULAR LOCALISATION   1.12611e-08    CDC24 ERV46 PTA1 ACS1 SLA1 MRPL16 URA7 NUP170 PET112 IPP1 CDS1 SEC18 CMD1 ALG1 MRPS9 AME1 THR4 NUP84 STF1 COP1 DHH1 REG1 RTN1 LYS4 MNN10 GCN2 EFT2 RPB7 MRP20 NHX1 SMX2 LPD1 IME4 RSC1 SPR3 NUP57 TYS1 TFG1 NAS6 PUP2 ENO1 COX6 YAP1801 RPN10 BCY1 FLX1 TPM2 DAL81 LAS21 MRPL8 CCT7 KRE9 SWI3 NTA1 RPA12 FIP1 YKL005C PUT3 ATP7 TFA1 MAE1 RPC25 CNB1 YKT6 TIF1 SNF7 SPT8 ERG3 GSP1 CHS5 VPS33 ATP18 TOM37 RNA14 AIP1 VTI1 CIK1 TIF11 IDH1 ARP5 MLS1 TOM70 SRP1 YNL213C SLA2 SUI1 PIK1 SEC21 MRPS18 RFA2 KRE1 DBP6 MDM20 MSN1 RPO31 RPT5 RPN8 NOP58 YPL013C SSO1 DSS4 RLF2 FHL1   103            2256

 

 

 

MIPS Phenotypes

Category          p-value In Category from Cluster          k          f

Cell morphology and organelle mutants  0.000123962   CDC24 ACS1 SLA1 URA7 ECM33 SEC18 CMD1 AME1 NUP84 COP1 REG1 MNN10 MLC1 PUP2 ULP2 LAS21 KRE9 ECM17 AUR1 CNB1 YKT6 CHS5 VPS33 ATP18 VTI1 SLA2 SEC21 MCK1 KRE1 MDM20 MSN1    31        530

Conditional phenotypes 0.000147335   CDC24 SLA1 NUP170 NGR1 NUP84 COP1 DHH1 REG1 MNN10 GCN2 GUK1 RSC1 COX6 SSZ1 ULP2 BCY1 KRE9 FIP1 TFA1 SNF7 VPS33 SRP1 SLA2 SEC21 MCK1 RFA2 DBP6 YOL036W MDM20 NOP58 FHL1    31        535

 

 

 

MIPS Subcellular Localization

Category          p-value In Category from Cluster          k          f

 

 

 

MIPS Protein Complexes

Category          p-value In Category from Cluster          k          f

 

 

 

MIPS Protein Classes

Category          p-value In Category from Cluster          k          f

 

 

 

GO Molecular Function

Category          p-value In Category from Cluster          k          f

 

 

 

GO Biological Process

Category          p-value In Category from Cluster          k          f

cell growth and/or maintenance [GO:0008151] 7.6817e-06      CDC24 ERV46 PTA1 ACS1 SLA1 MRPL16 URA7 NUP170 PET112 CDS1 ECM33 SEC18 CMD1 ALG1 OPY1 MRPS9 AME1 RRP7 THR4 NUP84 STF1 COP1 STE7 DHH1 UFD2 REG1 LYS4 MNN10 GCN2 SSF2 EFT2 RPB7 MRP20 SIP1 GUK1 NHX1 SMX2 LPD1 MLC1 IME4 HOS2 RSC1 SPR3 NUP57 TFG1 PHB2 NAS6 PUP2 ENO1 WSC4 COX6 SSZ1 YHR116W YAP1801 RPN10 ULP2 BCY1 CST6 PRM2 NEO1 FLX1 TPM2 DSN1 DAL81 LAS21 MRPL8 CCT7 KRE9 SWI3 MNN11 NTA1 RPA12 FIP1 ECM17 AUR1 PUT3 ATP7 TFA1 MAE1 DHR2 LTV1 RPC25 EBP2 CNB1 YKT6 SET3 TIF1 UBR2 SNF7 SPT8 ERG3 UTP13 GSP1 CHS5 VPS33 ATP18 TAF4 TOM37 RNA14 AIP1 UTP15 VTI1 CIK1 TIF11 IDH1 ARP5 MLS1 DCP2 TOM70 NPR1 SRP1 SLA2 SUI1 PIK1 SEC21 MRPS18 MCK1 RFA2 KRE1 RSM19 DBP6 MDM20 BRX1 MSN1 NOB1 SGT1 RPO31 RPT5 RPN8 NOP58 RRP12 SSO1 DSS4 FHL1 ANT1           135            3657

cell organization and biogenesis [GO:0016043] 8.88681e-06    CDC24 SLA1 NUP170 PET112 ECM33 SEC18 CMD1 AME1 RRP7 NUP84 MNN10 SSF2 NHX1 MLC1 HOS2 RSC1 SPR3 NUP57 WSC4 TPM2 MRPL8 CCT7 KRE9 SWI3 ECM17 DHR2 EBP2 CNB1 SET3 SNF7 SPT8 UTP13 GSP1 VPS33 TOM37 AIP1 UTP15 VTI1 CIK1 ARP5 TOM70 SLA2 KRE1 DBP6 MDM20 BRX1 NOP58 RRP12 FHL1 ANT1    50        939

 

 

 

GO Cellular Component

Category          p-value In Category from Cluster          k          f

intracellular [GO:0005622]       2.28369e-08    CDC24 ERV46 PTA1 ACS1 SLA1 MRPL16 URA7 NUP170 PET112 CDS1 YBR077C SEC18 CMD1 MRPS9 NGR1 NUP84 STF1 COP1 STE7 DHH1 YDL193W REG1 LYS4 MNN10 GCN2 SSF2 EFT2 RPB7 MRP20 SIP1 NHX1 SMX2 LPD1 MLC1 HOS2 RSC1 SPR3 NUP57 TYS1 TFG1 PHB2 NAS6 PUP2 ENO1 COX6 SSZ1 YHR115C YAP1801 RPN10 ULP2 BCY1 CST6 FLX1 TPM2 DSN1 DAL81 LAS21 MRPL8 CCT7 SWI3 MNN11 RPA12 FIP1 AUR1 PUT3 ATP7 TFA1 MAE1 DHR2 RPC25 EBP2 CNB1 SET3 TIF1 SNF7 SPT8 ERG3 UTP13 GSP1 CHS5 VPS33 ATP18 TAF4 TOM37 RNA14 AIP1 UTP15 VTI1 CIK1 TIF11 NCE103 IDH1 ARP5 MLS1 DCP2 TOM70 NPR1 SRP1 SLA2 SUI1 DSL1 PIK1 SEC21 MRPS18 RFA2 RSM19 DBP6 MDM20 BRX1 MSN1 NOB1 SGT1 RPO31 RPT5 NOC2 RPN8 NOP58 RRP12 SSO1 RLF2 FHL1 ANT1 122      2921

cell [GO:0005623]       2.74981e-08    CDC24 ERV46 PTA1 ACS1 SLA1 MRPL16 URA7 NUP170 PET112 CDS1 YBR077C SEC18 CMD1 MRPS9 NGR1 NUP84 STF1 COP1 STE7 DHH1 YDL193W REG1 LYS4 MNN10 GCN2 SSF2 EFT2 RPB7 MRP20 SIP1 NHX1 SMX2 LPD1 MLC1 HOS2 RSC1 SPR3 NUP57 TYS1 TFG1 PHB2 NAS6 PUP2 ENO1 WSC4 COX6 SSZ1 YHR115C YAP1801 RPN10 ULP2 BCY1 CST6 PRM2 FLX1 TPM2 DSN1 DAL81 LAS21 MRPL8 CCT7 SWI3 MNN11 RPA12 FIP1 AUR1 PUT3 ATP7 TFA1 MAE1 DHR2 RPC25 EBP2 CNB1 YKT6 SET3 TIF1 SNF7 SPT8 ERG3 UTP13 GSP1 CHS5 VPS33 ATP18 TAF4 TOM37 RNA14 AIP1 UTP15 VTI1 CIK1 TIF11 NCE103 IDH1 ARP5 MLS1 DCP2 TOM70 NPR1 SRP1 SLA2 SUI1 DSL1 PIK1 SEC21 MRPS18 MCK1 RFA2 RSM19 DBP6 MDM20 BRX1 MSN1 NOB1 SGT1 RPO31 RPT5 NOC2 RPN8 NOP58 RRP12 SSO1 DSS4 RLF2 FHL1 ANT1         127      3106

cytoplasm [GO:0005737]         5.09447e-06    ERV46 ACS1 SLA1 MRPL16 URA7 PET112 CDS1 YBR077C SEC18 CMD1 MRPS9 NGR1 STF1 COP1 STE7 DHH1 YDL193W REG1 LYS4 MNN10 GCN2 EFT2 MRP20 SIP1 NHX1 LPD1 MLC1 SPR3 TYS1 PHB2 NAS6 PUP2 ENO1 COX6 SSZ1 YHR115C YAP1801 RPN10 BCY1 FLX1 TPM2 DSN1 LAS21 MRPL8 CCT7 MNN11 AUR1 ATP7 MAE1 CNB1 TIF1 SNF7 ERG3 CHS5 VPS33 ATP18 TOM37 AIP1 VTI1 CIK1 TIF11 NCE103 IDH1 MLS1 DCP2 TOM70 NPR1 SRP1 SLA2 SUI1 DSL1 PIK1 SEC21 MRPS18 RSM19 MDM20 NOB1 RPT5 RPN8 RRP12 ANT1 81        1810

 

 

 

SMART Domains

Category          p-value In Category from Cluster          k          f

 

 

 

PFam-A Domains

Category          p-value In Category from Cluster          k          f

 

 

 

Yeast Two Hybrid - Uetz

Category          p-value In Category from Cluster          k          f

 

 

 

Yeast Two Hybrid - Ito (core)

Category          p-value In Category from Cluster          k          f

 

 

 

Yeast Two Hybrid - Ito (full)

Category          p-value In Category from Cluster          k          f

 

 

 

Synthetic Genetic Array Analysis

Category          p-value In Category from Cluster          k          f

 

 

 

MDS Proteomics Complexes

Category          p-value In Category from Cluster          k          f

 

 

 

Cellzome Complexes

Category          p-value In Category from Cluster          k          f

YBL039C (URA7)      5.40819e-06    URA7 RPN10 YKT6 TIF1 RPT5 RPN8         6          17

 

 

 

Proteome Localization--Observed

Category          p-value In Category from Cluster          k          f

 

 

 

Proteome Localization--Predicted+Observed

Category          p-value In Category from Cluster          k          f

 

 

 

Deletions Consortium (Essentiality, Morphology)

Category          p-value In Category from Cluster          k          f

essential            7.3472e-07      CDC24 PTA1 IPP1 CDS1 SEC18 CMD1 ALG1 AME1 RRP7 COP1 YDL193W RPB7 GUK1 NUP57 TYS1 TFG1 PUP2 ULP2 NEO1 DSN1 CCT7 KRE9 FIP1 AUR1 YKL014C TFA1 DHR2 RPC25 EBP2 YKL195W YKT6 YLL034C UTP13 TAF4 RNA14 UTP15 VTI1 TIF11 DCP2 SRP1 SUI1 DSL1 PIK1 SEC21 MRPS18 RFA2 YNL313C DBP6 BRX1 NOB1 SGT1 RPO31 RPT5 NOC2 RPN8 YOR262W NOP58 RRP12 FHL1             59        1101

 

 

 

Yeast Fitness Data

Category          p-value In Category from Cluster          k          f

Slow Growers  0.0116551       URA7 NUP84 DHH1 REG1 MNN10 MRP20 LPD1 RMD9 RSC1 SSZ1 FLX1 LAS21 SWI3 MNN11 RPA12 ATP7 LTV1 YLL033W ERG3 VPS33 TOM37 IDH1 ARP5 YNL119W TOM70 YNR036C MDM20 YOR205C    28        617

 

 

 

Published Complexes

Category          p-value In Category from Cluster          k          f


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Abf1-ChIP-exact.FunSpec.txt

 Input Cluster (n=36)

YBL038W       MRPL16

YBL039C        URA7

YBR011C        IPP1

YCL031C        RRP7

YDL010W

YDL012C

YDL145C        COP1

YDL189W       RBS1

YDL190C        UFD2

YDR283C       GCN2

YDR454C       GUK1

YDR456W      NHX1

YGL192W       IME4

YGL194C        HOS2

YGR231C       PHB2

YGR232W      NAS6

YGR253C       PUP2

YGR254W      ENO1

YIL031W        ULP2

YIL033C         BCY1

YJL062W        LAS21

YJL062W-A

YJL063C         MRPL8

YKL028W      TFA1

YKL029C       MAE1

YKL143W      LTV1

YKL144C       RPC25

YKL195W

YKL196C       YKT6

YKR059W      TIF1

YNL059C       ARP5

YOL116W      MSN1

YOR205C

YOR206W      NOC2

YOR261C       RPN8

YOR262W

 

Genes Not Found:

 

YBR012W-A

YBR012W-B

MIPS Functional Classification

Category          p-value In Category from Cluster          k          f

 

 

 

MIPS Phenotypes

Category          p-value In Category from Cluster          k          f

 

 

 

MIPS Subcellular Localization

Category          p-value In Category from Cluster          k          f

 

 

 

MIPS Protein Complexes

Category          p-value In Category from Cluster          k          f

 

 

 

MIPS Protein Classes

Category          p-value In Category from Cluster          k          f

 

 

 

GO Molecular Function

Category          p-value In Category from Cluster          k          f

 

 

 

GO Biological Process

Category          p-value In Category from Cluster          k          f

 

 

 

GO Cellular Component

Category          p-value In Category from Cluster          k          f

 

 

 

SMART Domains

Category          p-value In Category from Cluster          k          f

 

 

 

PFam-A Domains

Category          p-value In Category from Cluster          k          f

 

 

 

Yeast Two Hybrid - Uetz

Category          p-value In Category from Cluster          k          f

 

 

 

Yeast Two Hybrid - Ito (core)

Category          p-value In Category from Cluster          k          f

 

 

 

Yeast Two Hybrid - Ito (full)

Category          p-value In Category from Cluster          k          f

 

 

 

Synthetic Genetic Array Analysis

Category          p-value In Category from Cluster          k          f

 

 

 

MDS Proteomics Complexes

Category          p-value In Category from Cluster          k          f

 

 

 

Cellzome Complexes

Category          p-value In Category from Cluster          k          f

YBL039C (URA7)      2.07013e-06    URA7 YKT6 TIF1 RPN8        4          17

 

 

 

Proteome Localization--Observed

Category          p-value In Category from Cluster          k          f

 

 

 

Proteome Localization--Predicted+Observed

Category          p-value In Category from Cluster          k          f

 

 

 

Deletions Consortium (Essentiality, Morphology)

Category          p-value In Category from Cluster          k          f

 

 

 

Yeast Fitness Data

Category          p-value In Category from Cluster          k          f

 

 

 

Published Complexes

Category          p-value In Category from Cluster          k          f

 

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Abf1-PBMandChIP-alldata.FunSpec.txt

 Input Cluster (n=120)

YAL023C        PMT2

YAL042W       ERV46

YAL043C        PTA1

YAL053W

YAL054C        ACS1

YBL007C        SLA1

YBL038W       MRPL16

YBL039C        URA7

YBR101C

YBR109C        CMD1

YBR110W       ALG1

YBR146W       MRPS9

YBR283C        SSH1

YBR284W

YCL011C        GBP2

YCL031C        RRP7

YCR053W      THR4

YCR082W

YDL035C        GPR1

YDL105W       QRI2

YDL106C        PHO2

YDL116W       NUP84

YDL130W-A  STF1

YDL193W

YDR028C       REG1

YDR194C       MSS116

YDR195W      REF2

YDR233C       RTN1

YDR234W      LYS4

YDR280W      RRP45

YDR283C       GCN2

YDR326C

YDR361C       BCP1

YDR384C       ATO3

YDR385W      EFT2

YDR404C       RPB7

YDR405W      MRP20

YEL017C-A    PMP2

YEL017W

YFL017W-A   SMX2

YFL018C        LPD1

YFL047W       RGD2

YFL048C        EMP47

YGL106W       MLC1

YGL107C        RMD9

YGL192W       IME4

YGL194C        HOS2

YGL195W       GCN1

YGL222C        EDC1

YGR059W      SPR3

YGR183C       QCR9

YHL027W       RIM101

YHL028W       WSC4

YHL029C

YHR051W      COX6

YHR064C       SSZ1

YHR077C       NMD2

YHR078W

YHR115C

YHR116W

YIL134W        FLX1

YIL135C

YJL008C         CCT8

YJL111W        CCT7

YJL174W        KRE9

YJL176C         SWI3

YJR062C         NTA1

YJR063W        RPA12

YJR137C         ECM17

YJR138W        IML1

YKL014C

YKL015W      PUT3

YKL016C       ATP7

YKL167C       MRP49

YKL172W      EBP2

YKL190W      CNB1

YKL195W

YKL196C       YKT6

YKR029C       SET3

YKR030W      MSG1

YKR081C       RPF2

YKR082W      NUP133

YLR055C        SPT8

YLR056W       ERG3

YLR095C        IOC2

YLR096W       KIN2

YLR293C        GSP1

YLR330W       CHS5

YLR396C        VPS33

YMR060C       TOM37

YMR061W      RNA14

YMR129W      POM152

YMR197C       VTI1

YMR198W      CIK1

YMR296C       LCB1

YMR297W      PRC1

YNL036W      NCE103

YNL037C       IDH1

YNL085W      MKT1

YNL116W

YNL119W

YNL121C       TOM70

YNL183C       NPR1

YNL189W      SRP1

YNL212W      VID27

YNL213C

YNL287W      SEC21

YNR046W

YOL036W

YOL076W      MDM20

YOL077C       BRX1

YOL116W      MSN1

YOR045W      TOM6

YOR116C       RPO31

YOR117W      RPT5

YOR205C

YOR206W      NOC2

YOR261C       RPN8

YOR262W

YPL242C        IQG1

 

Genes Not Found:

 

SNR14

SNR68

TM%28CAU%29J2

YDR194W-A

YHR050W-A

YIL134C-A

MIPS Functional Classification

Category          p-value In Category from Cluster          k          f

SUBCELLULAR LOCALISATION   7.07393e-09    PMT2 ERV46 PTA1 ACS1 SLA1 MRPL16 URA7 CMD1 ALG1 MRPS9 SSH1 GBP2 THR4 GPR1 PHO2 NUP84 STF1 REG1 MSS116 REF2 RTN1 LYS4 GCN2 EFT2 RPB7 MRP20 PMP2 SMX2 LPD1 EMP47 IME4 GCN1 SPR3 QCR9 RIM101 COX6 NMD2 FLX1 CCT8 CCT7 KRE9 SWI3 NTA1 RPA12 PUT3 ATP7 MRP49 CNB1 YKT6 NUP133 SPT8 ERG3 KIN2 GSP1 CHS5 VPS33 TOM37 RNA14 POM152 VTI1 CIK1 PRC1 IDH1 TOM70 SRP1 YNL213C SEC21 MDM20 MSN1 TOM6 RPO31 RPT5 RPN8 IQG1    74        2256

mitochondrion   0.000182651   ACS1 MRPL16 MRPS9 STF1 MSS116 LYS4 MRP20 LPD1 QCR9 COX6 FLX1 ATP7 MRP49 TOM37 IDH1 TOM70 YNL213C TOM6       18        366

 

 

 

MIPS Phenotypes

Category          p-value In Category from Cluster          k          f

 

 

 

MIPS Subcellular Localization

Category          p-value In Category from Cluster          k          f

mitochondria     0.000375582   ACS1 MRPL16 MRPS9 STF1 MSS116 LYS4 MRP20 LPD1 QCR9 COX6 FLX1 ATP7 MRP49 TOM37 IDH1 TOM70 YNL213C TOM6       18        388

 

 

 

MIPS Protein Complexes

Category          p-value In Category from Cluster          k          f

 

 

 

MIPS Protein Classes

Category          p-value In Category from Cluster          k          f

 

 

 

GO Molecular Function

Category          p-value In Category from Cluster          k          f

 

 

 

GO Biological Process

Category          p-value In Category from Cluster          k          f

 

 

 

GO Cellular Component

Category          p-value In Category from Cluster          k          f

 

 

 

SMART Domains

Category          p-value In Category from Cluster          k          f

 

 

 

PFam-A Domains

Category          p-value In Category from Cluster          k          f

 

 

 

Yeast Two Hybrid - Uetz

Category          p-value In Category from Cluster          k          f

 

 

 

Yeast Two Hybrid - Ito (core)

Category          p-value In Category from Cluster          k          f

 

 

 

Yeast Two Hybrid - Ito (full)

Category          p-value In Category from Cluster          k          f

 

 

 

Synthetic Genetic Array Analysis

Category          p-value In Category from Cluster          k          f

 

 

 

MDS Proteomics Complexes

Category          p-value In Category from Cluster          k          f

 

 

 

Cellzome Complexes

Category          p-value In Category from Cluster          k          f

 

 

 

Proteome Localization--Observed

Category          p-value In Category from Cluster          k          f

 

 

 

Proteome Localization--Predicted+Observed

Category          p-value In Category from Cluster          k          f

 

 

 

Deletions Consortium (Essentiality, Morphology)

Category          p-value In Category from Cluster          k          f

 

 

 

Yeast Fitness Data

Category          p-value In Category from Cluster          k          f

Slow Growers  0.000209241   PMT2 URA7 SSH1 PHO2 NUP84 REG1 MSS116 REF2 MRP20 LPD1 RMD9 SSZ1 FLX1 SWI3 RPA12 ATP7 NUP133 ERG3 VPS33 TOM37 IDH1 YNL119W TOM70 MDM20 YOR205C           25            617

 

 

 

Published Complexes

Category          p-value In Category from Cluster          k          f


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Abf1-PBMandChIP-2SD.FunSpec.txt

 Input Cluster (n=85)

YAL042W       ERV46

YAL043C        PTA1

YAL053W

YAL054C        ACS1

YBL007C        SLA1

YBL038W       MRPL16

YBL039C        URA7

YBR109C        CMD1

YBR110W       ALG1

YBR146W       MRPS9

YCL031C        RRP7

YCR053W      THR4

YDL116W       NUP84

YDL130W-A  STF1

YDL193W

YDR028C       REG1

YDR233C       RTN1

YDR234W      LYS4

YDR283C       GCN2

YDR326C

YDR384C       ATO3

YDR385W      EFT2

YDR404C       RPB7

YDR405W      MRP20

YFL017W-A   SMX2

YFL018C        LPD1

YGL106W       MLC1

YGL107C        RMD9

YGL192W       IME4

YGL194C        HOS2

YGR059W      SPR3

YHL028W       WSC4

YHL029C

YHR051W      COX6

YHR064C       SSZ1

YHR115C

YHR116W

YIL134W        FLX1

YIL135C

YJL111W        CCT7

YJL174W        KRE9

YJL176C         SWI3

YJR062C         NTA1

YJR063W        RPA12

YJR137C         ECM17

YJR138W        IML1

YKL014C

YKL015W      PUT3

YKL016C       ATP7

YKL172W      EBP2

YKL190W      CNB1

YKL195W

YKL196C       YKT6

YKR029C       SET3

YKR030W      MSG1

YLR055C        SPT8

YLR056W       ERG3

YLR293C        GSP1

YLR330W       CHS5

YLR396C        VPS33

YMR060C       TOM37

YMR061W      RNA14

YMR197C       VTI1

YMR198W      CIK1

YNL036W      NCE103

YNL037C       IDH1

YNL085W      MKT1

YNL116W

YNL119W

YNL121C       TOM70

YNL183C       NPR1

YNL189W      SRP1

YNL212W      VID27

YNL213C

YNL287W      SEC21

YOL036W

YOL076W      MDM20

YOL077C       BRX1

YOL116W      MSN1

YOR116C       RPO31

YOR117W      RPT5

YOR205C

YOR206W      NOC2

YOR261C       RPN8

YOR262W

 

Genes Not Found:

 

SNR68

YHR050W-A

YIL134C-A

MIPS Functional Classification

Category          p-value In Category from Cluster          k          f

SUBCELLULAR LOCALISATION   5.95572e-07    ERV46 PTA1 ACS1 SLA1 MRPL16 URA7 CMD1 ALG1 MRPS9 THR4 NUP84 STF1 REG1 RTN1 LYS4 GCN2 EFT2 RPB7 MRP20 SMX2 LPD1 IME4 SPR3 COX6 FLX1 CCT7 KRE9 SWI3 NTA1 RPA12 PUT3 ATP7 CNB1 YKT6 SPT8 ERG3 GSP1 CHS5 VPS33 TOM37 RNA14 VTI1 CIK1 IDH1 TOM70 SRP1 YNL213C SEC21 MDM20 MSN1 RPO31 RPT5 RPN8            53        2256

 

 

 

MIPS Phenotypes

Category          p-value In Category from Cluster          k          f

 

 

 

MIPS Subcellular Localization

Category          p-value In Category from Cluster          k          f

mitochondria     0.00064138     ACS1 MRPL16 MRPS9 STF1 LYS4 MRP20 LPD1 COX6 FLX1 ATP7 TOM37 IDH1 TOM70 YNL213C      14        388

 

 

 

MIPS Protein Complexes

Category          p-value In Category from Cluster          k          f

 

 

 

MIPS Protein Classes

Category          p-value In Category from Cluster          k          f

 

 

 

GO Molecular Function

Category          p-value In Category from Cluster          k          f

 

 

 

GO Biological Process

Category          p-value In Category from Cluster          k          f

 

 

 

GO Cellular Component

Category          p-value In Category from Cluster          k          f

 

 

 

SMART Domains

Category          p-value In Category from Cluster          k          f

 

 

 

PFam-A Domains

Category          p-value In Category from Cluster          k          f

 

 

 

Yeast Two Hybrid - Uetz

Category          p-value In Category from Cluster          k          f

 

 

 

Yeast Two Hybrid - Ito (core)

Category          p-value In Category from Cluster          k          f

 

 

 

Yeast Two Hybrid - Ito (full)

Category          p-value In Category from Cluster          k          f

 

 

 

Synthetic Genetic Array Analysis

Category          p-value In Category from Cluster          k          f

 

 

 

MDS Proteomics Complexes

Category          p-value In Category from Cluster          k          f

YML057W (CMP2)    4.67721e-05    CMD1 CNB1 IDH1    3          6

 

 

 

Cellzome Complexes

Category          p-value In Category from Cluster          k          f

YBL039C (URA7)      6.55744e-05    URA7 YKT6 RPT5 RPN8      4          17

 

 

 

Proteome Localization--Observed

Category          p-value In Category from Cluster          k          f

 

 

 

Proteome Localization--Predicted+Observed

Category          p-value In Category from Cluster          k          f

 

 

 

Deletions Consortium (Essentiality, Morphology)

Category          p-value In Category from Cluster          k          f

 

 

 

Yeast Fitness Data

Category          p-value In Category from Cluster          k          f

Slow Growers  0.000470878   URA7 NUP84 REG1 MRP20 LPD1 RMD9 SSZ1 FLX1 SWI3 RPA12 ATP7 ERG3 VPS33 TOM37 IDH1 YNL119W TOM70 MDM20 YOR205C        19        617

 

 

 

Published Complexes

Category          p-value In Category from Cluster          k          f


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Abf1-PBMandChIP-exact.FunSpec.txt

 

Input Cluster (n=13)

YBL038W       MRPL16

YBL039C        URA7

YCL031C        RRP7

YDR283C       GCN2

YGL192W       IME4

YGL194C        HOS2

YKL195W

YKL196C       YKT6

YOL116W      MSN1

YOR205C

YOR206W      NOC2

YOR261C       RPN8

YOR262W

 

Genes Not Found:

 

MIPS Functional Classification

Category          p-value In Category from Cluster          k          f

 

 

 

MIPS Phenotypes

Category          p-value In Category from Cluster          k          f

 

 

 

MIPS Subcellular Localization

Category          p-value In Category from Cluster          k          f

 

 

 

MIPS Protein Complexes

Category          p-value In Category from Cluster          k          f

 

 

 

MIPS Protein Classes

Category          p-value In Category from Cluster          k          f

 

 

 

GO Molecular Function

Category          p-value In Category from Cluster          k          f

 

 

 

GO Biological Process

Category          p-value In Category from Cluster          k          f

 

 

 

GO Cellular Component

Category          p-value In Category from Cluster          k          f

 

 

 

SMART Domains

Category          p-value In Category from Cluster          k          f

 

 

 

PFam-A Domains

Category          p-value In Category from Cluster          k          f

 

 

 

Yeast Two Hybrid - Uetz

Category          p-value In Category from Cluster          k          f

 

 

 

Yeast Two Hybrid - Ito (core)

Category          p-value In Category from Cluster          k          f

 

 

 

Yeast Two Hybrid - Ito (full)

Category          p-value In Category from Cluster          k          f

 

 

 

Synthetic Genetic Array Analysis

Category          p-value In Category from Cluster          k          f

 

 

 

MDS Proteomics Complexes

Category          p-value In Category from Cluster          k          f

 

 

 

Cellzome Complexes

Category          p-value In Category from Cluster          k          f

YBL039C (URA7)      4.66411e-06    URA7 YKT6 RPN8    3          17

 

 

 

Proteome Localization--Observed

Category          p-value In Category from Cluster          k          f

 

 

 

Proteome Localization--Predicted+Observed

Category          p-value In Category from Cluster          k          f

 

 

 

Deletions Consortium (Essentiality, Morphology)

Category          p-value In Category from Cluster          k          f

 

 

 

Yeast Fitness Data

Category          p-value In Category from Cluster          k          f

 

 

 

Published Complexes

Category          p-value In Category from Cluster          k          f

 

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Abf1-PBMandnotChIP-alldata.FunSpec.txt

Input Cluster (n=141)

YBL056W       PTC3

YBL057C

YBL063W       KIP1

YBL064C

YBR031W       RPL4A

YBR058C        UBP14

YBR058C-A   TSC3

YBR162C        TOS1

YBR162W-A  YSY6

YBR163W       DEM1

YBR169C        SSE2

YBR279W       PAF1

YBR290W       BSD2

YCL044C

YCL045C

YCR065W      HCM1

YCR092C       MSH3

YCR093W      CDC39

YDL028C        MPS1

YDL053C

YDL081C        RPP1A

YDL084W       SUB2

YDL229W       SSB1

YDR004W      RAD57

YDR005C       MAF1

YDR093W      DNF2

YDR138W      HPR1

YDR206W      EBS1

YDR216W      ADR1

YDR222W

YDR359C       VID21

YDR394W      RPT3

YDR407C       TRS120

YDR462W      MRPL28

YDR464W      SPP41

YER026C        CHO1

YER071C

YER072W       VTC1

YER089C        PTC2

YER090W       TRP2

YER122C        GLO3

YER123W       YCK3

YER141W       COX15

YER161C        SPT2

YER189W

YFL023W       BUD27

YFL024C        EPL1

YFL037W       TUB2

YFL038C        YPT1

YGL010W

YGL011C        SCL1

YGL025C        PGD1

YGL036W

YGL037C        PNC1

YGL077C        HNM1

YGL122C        NAB2

YGL234W       "ADE5,7"

YGL236C        MTO1

YGR007W      MUQ1

YGR074W      SMD1

YGR187C       HGH1

YGR282C       BGL2

YHR005C-A   MRS11

YHR019C       DED81

YHR020W

YHR061C       GIC1

YHR065C       RRP3

YHR066W      SSF1

YHR079C-A   SAE3

YHR080C

YHR081W      LRP1

YJL003W        COX16

YJL004C         SYS1

YJL055W

YJL056C         ZAP1

YJL122W

YJL123C

YJR088C

YJR089W        BIR1

YKL019W      RAM2

YKL020C       SPT23

YKL098W

YKL099C       UTP11

YKL112W      ABF1

YKL113C       RAD27

YKL149C       DBR1

YKL210W      UBA1

YKR046C

YKR057W      RPS21A

YKR084C       HBS1

YLL011W       SOF1

YLL012W

YLL013C        PUF3

YLR179C

YLR180W       SAM1

YLR203C        MSS51

YLR204W       QRI5

YLR264W       RPS28B

YLR314C        CDC3

YLR398C        SKI2

YLR421C        RPN13

YLR422W

YML009C       MRPL39

YMR052W      FAR3

YMR066W      SOV1

YMR078C       CTF18

YMR079W      SEC14

YMR203W      TOM40

YMR309C       NIP1

YNL112W      DBP2

YNL131W      TOM22

YNL250W      RAD50

YNL251C       NRD1

YNR035C       ARC35

YOL025W      LAG2

YOL026C

YOL058W      ARG1

YOL104C       NDJ1

YOR089C       VPS21

YOR098C       NUP1

YOR099W      KTR1

YOR141C       ARP8

YOR142W      LSC1

YOR145C

YOR147W      MDM32

YOR167C       RPS28A

YOR168W      GLN4

YOR194C       TOA1

YOR195W      SLK19

YOR207C       RET1

YOR208W      PTP2

YOR209C       NPT1

YOR210W      RPB10

YOR213C       SAS5

YOR254C       SEC63

YOR255W

YPL138C        SPP1

YPL211W       NIP7

YPL212C        PUS1

YPR181C        SEC23

YPR182W       SMX3

 

Genes Not Found:

 

TS%28GCU%29O

YDR003W-A

YER188C-A

YMR050C

YMR051C

YOL103W-A

YOL103W-B

MIPS Functional Classification

Category          p-value In Category from Cluster          k          f

nucleus 5.75225e-07    KIP1 PAF1 HCM1 MSH3 CDC39 RAD57 HPR1 ADR1 RPT3 GLO3 YCK3 SPT2 SCL1 PGD1 NAB2 SMD1 RRP3 SSF1 ZAP1 SPT23 ABF1 RAD27 DBR1 UBA1 SOF1 SKI2 CTF18 DBP2 RAD50 NRD1 NDJ1 NUP1 TOA1 RET1 RPB10 SAS5 NIP7 PUS1 SMX3             39        774

SUBCELLULAR LOCALISATION   1.75162e-06    KIP1 RPL4A SSE2 PAF1 BSD2 HCM1 MSH3 CDC39 RPP1A SSB1 RAD57 HPR1 ADR1 RPT3 TRS120 MRPL28 CHO1 VTC1 TRP2 GLO3 YCK3 COX15 SPT2 TUB2 YPT1 SCL1 PGD1 HNM1 NAB2 MTO1 SMD1 BGL2 MRS11 RRP3 SSF1 ZAP1 RAM2 SPT23 ABF1 RAD27 DBR1 UBA1 RPS21A HBS1 SOF1 MSS51 RPS28B CDC3 SKI2 MRPL39 CTF18 SEC14 TOM40 NIP1 DBP2 TOM22 RAD50 NRD1 ARC35 LAG2 ARG1 NDJ1 VPS21 NUP1 KTR1 ARP8 RPS28A GLN4 TOA1 RET1 PTP2 RPB10 SAS5 SEC63 NIP7 PUS1 SEC23 SMX3       78        2256

 

 

 

MIPS Phenotypes

Category          p-value In Category from Cluster          k          f

 

 

 

MIPS Subcellular Localization

Category          p-value In Category from Cluster          k          f

nucleus 1.52609e-06    KIP1 PAF1 HCM1 MSH3 CDC39 RAD57 HPR1 ADR1 RPT3 VTC1 GLO3 YCK3 SPT2 SCL1 PGD1 NAB2 SMD1 RRP3 SSF1 ZAP1 SPT23 ABF1 RAD27 DBR1 UBA1 SOF1 SKI2 CTF18 DBP2 RAD50 NRD1 NDJ1 NUP1 TOA1 RET1 RPB10 SAS5 NIP7 PUS1 SMX3 40        836

 

 

 

MIPS Protein Complexes

Category          p-value In Category from Cluster          k          f

 

 

 

MIPS Protein Classes

Category          p-value In Category from Cluster          k          f

 

 

 

GO Molecular Function

Category          p-value In Category from Cluster          k          f

 

 

 

GO Biological Process

Category          p-value In Category from Cluster          k          f

metabolism [GO:0008152]       4.6342e-06      PTC3 RPL4A UBP14 TSC3 YSY6 SSE2 PAF1 BSD2 HCM1 MSH3 CDC39 RPP1A SUB2 SSB1 RAD57 MAF1 HPR1 ADR1 RPT3 TRS120 MRPL28 SPP41 CHO1 PTC2 TRP2 GLO3 YCK3 COX15 SPT2 EPL1 YPT1 SCL1 PGD1 PNC1 NAB2 "ADE5,7" MTO1 MUQ1 SMD1 MRS11 DED81 RRP3 SAE3 SYS1 ZAP1 RAM2 SPT23 UTP11 ABF1 RAD27 DBR1 UBA1 RPS21A HBS1 SOF1 PUF3 SAM1 MSS51 RPS28B SKI2 RPN13 MRPL39 SEC14 TOM40 NIP1 TOM22 RAD50 NRD1 ARG1 VPS21 NUP1 KTR1 LSC1 RPS28A GLN4 TOA1 RET1 PTP2 NPT1 RPB10 SAS5 SEC63 SPP1 NIP7 PUS1 SEC23 SMX3 87        2693

transcription [GO:0006350]      6.44549e-06    PTC3 PAF1 HCM1 CDC39 MAF1 HPR1 ADR1 SPP41 PTC2 SPT2 EPL1 PGD1 PNC1 RRP3 ZAP1 SPT23 UTP11 ABF1 SOF1 TOA1 RET1 PTP2 NPT1 RPB10 SAS5 SPP1 NIP7             27        480

transcription, DNA-dependent [GO:0006351]  8.03832e-06    PTC3 PAF1 HCM1 CDC39 MAF1 HPR1 SPP41 PTC2 SPT2 EPL1 PGD1 PNC1 RRP3 ZAP1 SPT23 UTP11 ABF1 SOF1 TOA1 RET1 PTP2 NPT1 RPB10 SAS5 SPP1 NIP7    26        457

cell growth and/or maintenance [GO:0008151] 8.08337e-06    PTC3 KIP1 YBL064C RPL4A UBP14 TSC3 YSY6 SSE2 PAF1 BSD2 HCM1 MSH3 CDC39 MPS1 RPP1A SUB2 SSB1 RAD57 MAF1 DNF2 HPR1 EBS1 ADR1 RPT3 TRS120 MRPL28 SPP41 CHO1 VTC1 PTC2 TRP2 GLO3 YCK3 COX15 SPT2 BUD27 EPL1 TUB2 YPT1 SCL1 PGD1 PNC1 HNM1 NAB2 "ADE5,7" MTO1 MUQ1 SMD1 BGL2 MRS11 DED81 GIC1 RRP3 SSF1 SAE3 SYS1 ZAP1 BIR1 RAM2 SPT23 UTP11 ABF1 RAD27 DBR1 UBA1 RPS21A HBS1 SOF1 PUF3 SAM1 MSS51 RPS28B CDC3 SKI2 RPN13 MRPL39 FAR3 CTF18 SEC14 TOM40 NIP1 TOM22 RAD50 NRD1 ARC35 ARG1 NDJ1 VPS21 NUP1 KTR1 LSC1 MDM32 RPS28A GLN4 TOA1 SLK19 RET1 PTP2 NPT1 RPB10 SAS5 SEC63 SPP1 NIP7 PUS1 SEC23 SMX3        107      3657

nucleobase, nucleoside, nucleotide and nucleic acid metabolism [GO:0006139] 1.25487e-05    PTC3 PAF1 HCM1 MSH3 CDC39 SUB2 RAD57 MAF1 HPR1 ADR1 SPP41 PTC2 SPT2 EPL1 PGD1 PNC1 NAB2 "ADE5,7" SMD1 RRP3 SAE3 ZAP1 SPT23 UTP11 ABF1 RAD27 DBR1 SOF1 PUF3 MSS51 SKI2 RAD50 NRD1 NUP1 TOA1 RET1 PTP2 NPT1 RPB10 SAS5 SPP1 NIP7 PUS1 SMX3           44        1046

 

 

 

GO Cellular Component

Category          p-value In Category from Cluster          k          f

intracellular [GO:0005622]       2.23405e-06    KIP1 YBL064C RPL4A SSE2 PAF1 BSD2 HCM1 MSH3 CDC39 MPS1 RPP1A SUB2 SSB1 RAD57 MAF1 DNF2 HPR1 EBS1 ADR1 RPT3 TRS120 MRPL28 CHO1 VTC1 GLO3 YCK3 COX15 SPT2 EPL1 TUB2 YPT1 SCL1 PGD1 HNM1 NAB2 "ADE5,7" MTO1 SMD1 MRS11 DED81 GIC1 RRP3 SSF1 SYS1 ZAP1 BIR1 RAM2 SPT23 UTP11 ABF1 RAD27 DBR1 UBA1 YKR046C RPS21A SOF1 YLR179C SAM1 RPS28B CDC3 SKI2 RPN13 MRPL39 CTF18 SEC14 TOM40 NIP1 TOM22 RAD50 NRD1 ARC35 ARG1 NDJ1 VPS21 NUP1 KTR1 LSC1 YOR145C RPS28A GLN4 TOA1 SLK19 RET1 PTP2 NPT1 RPB10 SAS5 SEC63 SPP1 NIP7 PUS1 SEC23 SMX3         93        2921

cell [GO:0005623]       1.16287e-05    KIP1 YBL064C RPL4A TSC3 SSE2 PAF1 BSD2 HCM1 MSH3 CDC39 MPS1 RPP1A SUB2 SSB1 RAD57 MAF1 DNF2 HPR1 EBS1 ADR1 RPT3 TRS120 MRPL28 CHO1 VTC1 GLO3 YCK3 COX15 SPT2 EPL1 TUB2 YPT1 SCL1 PGD1 HNM1 NAB2 "ADE5,7" MTO1 SMD1 MRS11 DED81 GIC1 RRP3 SSF1 SYS1 ZAP1 BIR1 RAM2 SPT23 UTP11 ABF1 RAD27 DBR1 UBA1 YKR046C RPS21A SOF1 YLR179C SAM1 RPS28B CDC3 SKI2 RPN13 MRPL39 CTF18 SEC14 TOM40 NIP1 DBP2 TOM22 RAD50 NRD1 ARC35 ARG1 NDJ1 VPS21 NUP1 KTR1 LSC1 YOR145C RPS28A GLN4 TOA1 SLK19 RET1 PTP2 NPT1 RPB10 SAS5 SEC63 SPP1 NIP7 PUS1 SEC23 SMX3        95        3106

 

 

 

SMART Domains

Category          p-value In Category from Cluster          k          f

 

 

 

PFam-A Domains

Category          p-value In Category from Cluster          k          f

 

 

 

Yeast Two Hybrid - Uetz

Category          p-value In Category from Cluster          k          f

 

 

 

Yeast Two Hybrid - Ito (core)

Category          p-value In Category from Cluster          k          f

 

 

 

Yeast Two Hybrid - Ito (full)

Category          p-value In Category from Cluster          k          f

 

 

 

Synthetic Genetic Array Analysis

Category          p-value In Category from Cluster          k          f

 

 

 

MDS Proteomics Complexes

Category          p-value In Category from Cluster          k          f

 

 

 

Cellzome Complexes

Category          p-value In Category from Cluster          k          f

 

 

 

Proteome Localization--Observed

Category          p-value In Category from Cluster          k          f

 

 

 

Proteome Localization--Predicted+Observed

Category          p-value In Category from Cluster          k          f

nuc       0.000812661   KIP1 TOS1 PAF1 HCM1 MSH3 CDC39 MPS1 SUB2 MAF1 HPR1 ADR1 VID21 RPT3 TRS120 SPP41 SPT2 EPL1 TUB2 PGD1 NAB2 SMD1 RRP3 SSF1 YHR080C LRP1 YJL122W BIR1 YKL098W ABF1 DBR1 SOF1 YLR422W CTF18 DBP2 RAD50 NRD1 NDJ1 NUP1 ARP8 MDM32 TOA1 SLK19 RET1 RPB10 SAS5 SPP1 NIP7 PUS1 SMX3          49        1435

 

 

 

Deletions Consortium (Essentiality, Morphology)

Category          p-value In Category from Cluster          k          f

essential            0.000908289   CDC39 MPS1 SUB2 RPT3 TRS120 SPP41 EPL1 TUB2 YPT1 SCL1 NAB2 SMD1 MRS11 DED81 YHR020W RRP3 RAM2 UTP11 ABF1 UBA1 SOF1 CDC3 SEC14 TOM40 NIP1 DBP2 TOM22 NRD1 ARC35 YOL026C NUP1 YOR145C GLN4 TOA1 RET1 RPB10 SEC63 NIP7 SEC23 SMX3        40            1101

 

 

 

Yeast Fitness Data

Category          p-value In Category from Cluster          k          f

 

 

 

Published Complexes

Category          p-value In Category from Cluster          k          f

Andersen et al. (2002) - Curr Bio 12:1-            0.00387526     SUB2 TUB2 SMD1 RRP3 SSF1 UTP11 SOF1 CDC3 DBP2 RAD50 10        165


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Abf1-PBMandnotChIP-2SD.FunSpec.txt

 Input Cluster (n=99)

YBL056W       PTC3

YBL057C

YBL063W       KIP1

YBL064C

YBR031W       RPL4A

YBR058C        UBP14

YBR058C-A   TSC3

YBR162C        TOS1

YBR162W-A  YSY6

YBR163W       DEM1

YBR169C        SSE2

YBR279W       PAF1

YBR290W       BSD2

YCL044C

YCR065W      HCM1

YDL081C        RPP1A

YDL229W       SSB1

YDR206W      EBS1

YDR222W

YDR359C       VID21

YDR394W      RPT3

YDR407C       TRS120

YDR462W      MRPL28

YDR464W      SPP41

YER026C        CHO1

YER089C        PTC2

YER090W       TRP2

YER122C        GLO3

YER123W       YCK3

YER141W       COX15

YER161C        SPT2

YFL037W       TUB2

YFL038C        YPT1

YGL036W

YGL037C        PNC1

YGL077C        HNM1

YGL234W       "ADE5,7"

YGL236C        MTO1

YGR007W      MUQ1

YGR187C       HGH1

YGR282C       BGL2

YHR005C-A   MRS11

YHR061C       GIC1

YHR065C       RRP3

YHR066W      SSF1

YHR079C-A   SAE3

YJL003W        COX16

YJL004C         SYS1

YJL122W

YJL123C

YJR088C

YJR089W        BIR1

YKL019W      RAM2

YKL020C       SPT23

YKL112W      ABF1

YKL113C       RAD27

YKL210W      UBA1

YKR046C

YKR057W      RPS21A

YKR084C       HBS1

YLL011W       SOF1

YLL012W

YLL013C        PUF3

YLR203C        MSS51

YLR204W       QRI5

YLR314C        CDC3

YLR398C        SKI2

YLR421C        RPN13

YLR422W

YML009C       MRPL39

YMR066W      SOV1

YMR078C       CTF18

YMR079W      SEC14

YMR309C       NIP1

YNL112W      DBP2

YNL131W      TOM22

YNR035C       ARC35

YOL025W      LAG2

YOL026C

YOL058W      ARG1

YOL104C       NDJ1

YOR089C       VPS21

YOR098C       NUP1

YOR099W      KTR1

YOR141C       ARP8

YOR142W      LSC1

YOR145C

YOR147W      MDM32

YOR167C       RPS28A

YOR168W      GLN4

YOR194C       TOA1

YOR195W      SLK19

YOR209C       NPT1

YOR210W      RPB10

YOR213C       SAS5

YOR254C       SEC63

YOR255W

YPR181C        SEC23

YPR182W       SMX3

 

Genes Not Found:

 

TS%28GCU%29O

YOL103W-A

YOL103W-B

MIPS Functional Classification

Category          p-value In Category from Cluster          k          f

SUBCELLULAR LOCALISATION   3.34924e-06    KIP1 RPL4A SSE2 PAF1 BSD2 HCM1 RPP1A SSB1 RPT3 TRS120 MRPL28 CHO1 TRP2 GLO3 YCK3 COX15 SPT2 TUB2 YPT1 HNM1 MTO1 BGL2 MRS11 RRP3 SSF1 RAM2 SPT23 ABF1 RAD27 UBA1 RPS21A HBS1 SOF1 MSS51 CDC3 SKI2 MRPL39 CTF18 SEC14 NIP1 DBP2 TOM22 ARC35 LAG2 ARG1 NDJ1 VPS21 NUP1 KTR1 ARP8 RPS28A GLN4 TOA1 RPB10 SAS5 SEC63 SEC23 SMX3 58        2256

 

 

 

MIPS Phenotypes

Category          p-value In Category from Cluster          k          f

 

 

 

MIPS Subcellular Localization

Category          p-value In Category from Cluster          k          f

 

 

 

MIPS Protein Complexes

Category          p-value In Category from Cluster          k          f

 

 

 

MIPS Protein Classes

Category          p-value In Category from Cluster          k          f

 

 

 

GO Molecular Function

Category          p-value In Category from Cluster          k          f

 

 

 

GO Biological Process

Category          p-value In Category from Cluster          k          f

protein metabolism [GO:0019538]        7.9877e-06      PTC3 RPL4A UBP14 YSY6 SSE2 BSD2 RPP1A SSB1 RPT3 TRS120 MRPL28 PTC2 GLO3 YCK3 COX15 YPT1 MTO1 MRS11 SYS1 RAM2 UBA1 RPS21A HBS1 MSS51 SKI2 RPN13 MRPL39 SEC14 NIP1 TOM22 VPS21 NUP1 KTR1 RPS28A GLN4 SEC63 SEC23            37            1168

 

 

 

GO Cellular Component

Category          p-value In Category from Cluster          k          f

 

 

 

SMART Domains

Category          p-value In Category from Cluster          k          f

 

 

 

PFam-A Domains

Category          p-value In Category from Cluster          k          f

 

 

 

Yeast Two Hybrid - Uetz

Category          p-value In Category from Cluster          k          f

 

 

 

Yeast Two Hybrid - Ito (core)

Category          p-value In Category from Cluster          k          f

 

 

 

Yeast Two Hybrid - Ito (full)

Category          p-value In Category from Cluster          k          f

 

 

 

Synthetic Genetic Array Analysis

Category          p-value In Category from Cluster          k          f

 

 

 

MDS Proteomics Complexes

Category          p-value In Category from Cluster          k          f

 

 

 

Cellzome Complexes

Category          p-value In Category from Cluster          k          f

 

 

 

Proteome Localization--Observed

Category          p-value In Category from Cluster          k          f

other    0.000798085   YBL064C SSE2 RPT3 TUB2 YJL123C ARC35 SLK19        7          97

 

 

 

Proteome Localization--Predicted+Observed

Category          p-value In Category from Cluster          k          f

 

 

 

Deletions Consortium (Essentiality, Morphology)

Category          p-value In Category from Cluster          k          f

 

 

 

Yeast Fitness Data

Category          p-value In Category from Cluster          k          f

 

 

 

Published Complexes

Category          p-value In Category from Cluster          k          f


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Abf1-PBMandnotChIP-exact.FunSpec.txt

 Input Cluster (n=11)

YDR394W      RPT3

YDR407C       TRS120

YER161C        SPT2

YGR007W      MUQ1

YHR005C-A   MRS11

YKR084C       HBS1

YLR398C        SKI2

YOR145C

YOR147W      MDM32

YOR209C       NPT1

YOR210W      RPB10

 

Genes Not Found:

 

MIPS Functional Classification

Category          p-value In Category from Cluster          k          f

 

 

 

MIPS Phenotypes

Category          p-value In Category from Cluster          k          f

 

 

 

MIPS Subcellular Localization

Category          p-value In Category from Cluster          k          f

 

 

 

MIPS Protein Complexes

Category          p-value In Category from Cluster          k          f

 

 

 

MIPS Protein Classes

Category          p-value In Category from Cluster          k          f

 

 

 

GO Molecular Function

Category          p-value In Category from Cluster          k          f

 

 

 

GO Biological Process

Category          p-value In Category from Cluster          k          f

 

 

 

GO Cellular Component

Category          p-value In Category from Cluster          k          f

 

 

 

SMART Domains

Category          p-value In Category from Cluster          k          f

 

 

 

PFam-A Domains

Category          p-value In Category from Cluster          k          f

 

 

 

Yeast Two Hybrid - Uetz

Category          p-value In Category from Cluster          k          f

 

 

 

Yeast Two Hybrid - Ito (core)

Category          p-value In Category from Cluster          k          f

 

 

 

Yeast Two Hybrid - Ito (full)

Category          p-value In Category from Cluster          k          f

 

 

 

Synthetic Genetic Array Analysis

Category          p-value In Category from Cluster          k          f

 

 

 

MDS Proteomics Complexes

Category          p-value In Category from Cluster          k          f

 

 

 

Cellzome Complexes

Category          p-value In Category from Cluster          k          f

 

 

 

Proteome Localization--Observed

Category          p-value In Category from Cluster          k          f

 

 

 

Proteome Localization--Predicted+Observed

Category          p-value In Category from Cluster          k          f

 

 

 

Deletions Consortium (Essentiality, Morphology)

Category          p-value In Category from Cluster          k          f

 

 

 

Yeast Fitness Data

Category          p-value In Category from Cluster          k          f

 

 

 

Published Complexes

Category          p-value In Category from Cluster          k          f

 

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Abf1-ChIPandnotPBM-alldata.FunSpec.txt

 Input Cluster (n=99)

YBL079W       NUP170

YBL080C        PET112

YBR011C        IPP1

YBR029C        CDS1

YBR030W

YBR077C

YBR078W       ECM33

YBR080C        SEC18

YBR129C        OPY1

YBR211C        AME1

YBR212W       NGR1

YDL010W

YDL012C

YDL122W       UBP1

YDL145C        COP1

YDL159W       STE7

YDL159W-A

YDL160C        DHH1

YDL189W       RBS1

YDL190C        UFD2

YDL208W       NHP2

YDL209C        CWC2

YDR295C       PLO2

YDR296W      MHR1

YDR312W      SSF2

YDR339C

YDR454C       GUK1

YDR456W      NHX1

YGL228W       SHE10

YGL229C        SAP4

YGR056W      RSC1

YGR119C       NUP57

YGR185C       TYS1

YGR186W      TFG1

YGR231C       PHB2

YGR232W      NAS6

YGR253C       PUP2

YGR254W      ENO1

YHR161C       YAP1801

YHR162W

YHR199C

YHR200W      RPN10

YIL036W        CST6

YIL037C         PRM2

YIL048W        NEO1

YIR010W        DSN1

YIR023W        DAL81

YJL062W        LAS21

YJL062W-A

YJL063C         MRPL8

YJL201W        ECM25

YJR093C         FIP1

YJR116W

YJR127C         ZMS1

YKL004W      AUR1

YKL005C

YKL007W      CAP1

YKL008C       LAC1

YKL028W      TFA1

YKL029C       MAE1

YKL060C       FBA1

YKL135C       APL2

YKL143W      LTV1

YKL144C       RPC25

YKR056W      TRM2

YKR059W      TIF1

YLR024C        UBR2

YLR025W       SNF7

YLR174W       IDP2

YLR222C        UTP13

YLR229C        CDC42

YLR399C        BDF1

YML012W      ERV25

YML081C-A   ATP18

YML081W

YMR005W      TAF4

YMR033W      ARP9

YMR092C       AIP1

YMR093W      UTP15

YMR200W      ROT1

YNL059C       ARP5

YNL117W      MLS1

YNL118C       DCP2

YNL149C

YNL267W      PIK1

YOR056C       NOB1

YOR057W      SGT1

YOR310C       NOP58

YPL012W       RRP12

YPL013C

YPL036W       PMA2

YPL037C        EGD1

YPL228W       CET1

YPL232W       SSO1

YPR017C        DSS4

YPR018W       RLF2

YPR104C        FHL1

YPR128C        ANT1

YPR129W       SCD6

 

Genes Not Found:

 

SNR3

SNR55

SNR57

SNR61

YBR012W-A

YBR012W-B

MIPS Functional Classification

Category          p-value In Category from Cluster          k          f

 

 

 

MIPS Phenotypes

Category          p-value In Category from Cluster          k          f

 

 

 

MIPS Subcellular Localization

Category          p-value In Category from Cluster          k          f

transport vesicles          0.00107253     SEC18 COP1 APL2 ERV25 DSS4     5          50

 

 

 

MIPS Protein Complexes

Category          p-value In Category from Cluster          k          f

 

 

 

MIPS Protein Classes

Category          p-value In Category from Cluster          k          f

 

 

 

GO Molecular Function

Category          p-value In Category from Cluster          k          f

 

 

 

GO Biological Process

Category          p-value In Category from Cluster          k          f

 

 

 

GO Cellular Component

Category          p-value In Category from Cluster          k          f

intracellular [GO:0005622]       1.63637e-05    NUP170 PET112 CDS1 YBR077C SEC18 NGR1 UBP1 COP1 STE7 DHH1 NHP2 CWC2 MHR1 SSF2 NHX1 SAP4 RSC1 NUP57 TYS1 TFG1 PHB2 NAS6 PUP2 ENO1 YAP1801 RPN10 CST6 DSN1 DAL81 LAS21 MRPL8 FIP1 AUR1 CAP1 LAC1 TFA1 MAE1 FBA1 APL2 RPC25 TIF1 SNF7 IDP2 UTP13 CDC42 BDF1 ERV25 ATP18 TAF4 ARP9 AIP1 UTP15 ARP5 MLS1 DCP2 PIK1 NOB1 SGT1 NOP58 RRP12 PMA2 EGD1 CET1 SSO1 RLF2 FHL1 ANT1         67        2921

cell [GO:0005623]       3.40679e-05    NUP170 PET112 CDS1 YBR077C SEC18 NGR1 UBP1 COP1 STE7 DHH1 NHP2 CWC2 MHR1 SSF2 NHX1 SAP4 RSC1 NUP57 TYS1 TFG1 PHB2 NAS6 PUP2 ENO1 YAP1801 RPN10 CST6 PRM2 DSN1 DAL81 LAS21 MRPL8 FIP1 AUR1 CAP1 LAC1 TFA1 MAE1 FBA1 APL2 RPC25 TIF1 SNF7 IDP2 UTP13 CDC42 BDF1 ERV25 ATP18 TAF4 ARP9 AIP1 UTP15 ARP5 MLS1 DCP2 PIK1 NOB1 SGT1 NOP58 RRP12 PMA2 EGD1 CET1 SSO1 DSS4 RLF2 FHL1 ANT1           69        3106

 

 

 

SMART Domains

Category          p-value In Category from Cluster          k          f

 

 

 

PFam-A Domains

Category          p-value In Category from Cluster          k          f

 

 

 

Yeast Two Hybrid - Uetz

Category          p-value In Category from Cluster          k          f

 

 

 

Yeast Two Hybrid - Ito (core)

Category          p-value In Category from Cluster          k          f

 

 

 

Yeast Two Hybrid - Ito (full)

Category          p-value In Category from Cluster          k          f

 

 

 

Synthetic Genetic Array Analysis

Category          p-value In Category from Cluster          k          f

 

 

 

MDS Proteomics Complexes

Category          p-value In Category from Cluster          k          f

 

 

 

Cellzome Complexes

Category          p-value In Category from Cluster          k          f

 

 

 

Proteome Localization--Observed

Category          p-value In Category from Cluster          k          f

 

 

 

Proteome Localization--Predicted+Observed

Category          p-value In Category from Cluster          k          f

nuc       0.0109628       NUP170 PET112 CDS1 AME1 DHH1 NHP2 CWC2 PLO2 YDR339C SAP4 NUP57 TFG1 CST6 DAL81 ECM25 FIP1 YKL005C TFA1 RPC25 TRM2 SNF7 BDF1 TAF4 AIP1 UTP15 DCP2 PIK1 NOB1 NOP58 EGD1 CET1 RLF2 FHL1       33        1435

 

 

 

Deletions Consortium (Essentiality, Morphology)

Category          p-value In Category from Cluster          k          f

essential            1.4933e-05      IPP1 CDS1 SEC18 AME1 COP1 NHP2 CWC2 YDR339C GUK1 NUP57 TYS1 TFG1 PUP2 NEO1 DSN1 FIP1 AUR1 TFA1 FBA1 RPC25 UTP13 CDC42 TAF4 ARP9 UTP15 ROT1 DCP2 YNL149C PIK1 NOB1 SGT1 NOP58 RRP12 CET1 FHL1 35        1101

 

 

 

Yeast Fitness Data

Category          p-value In Category from Cluster          k          f

 

 

 

Published Complexes

Category          p-value In Category from Cluster          k          f


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Abf1-ChIPandnotPBM-2SD.FunSpec.txt

Input Cluster (n=73)

YBL079W       NUP170

YBL080C        PET112

YBR011C        IPP1

YBR029C        CDS1

YBR030W

YBR077C

YBR078W       ECM33

YBR080C        SEC18

YBR129C        OPY1

YBR211C        AME1

YBR212W       NGR1

YDL010W

YDL012C

YDL145C        COP1

YDL159W       STE7

YDL159W-A

YDL160C        DHH1

YDL189W       RBS1

YDL190C        UFD2

YDR312W      SSF2

YDR454C       GUK1

YDR456W      NHX1

YGR056W      RSC1

YGR119C       NUP57

YGR185C       TYS1

YGR186W      TFG1

YGR231C       PHB2

YGR232W      NAS6

YGR253C       PUP2

YGR254W      ENO1

YHR161C       YAP1801

YHR162W

YHR199C

YHR200W      RPN10

YIL036W        CST6

YIL037C         PRM2

YIL048W        NEO1

YIR010W        DSN1

YIR023W        DAL81

YJL062W        LAS21

YJL062W-A

YJL063C         MRPL8

YJR093C         FIP1

YKL004W      AUR1

YKL005C

YKL028W      TFA1

YKL029C       MAE1

YKL143W      LTV1

YKL144C       RPC25

YKR059W      TIF1

YLR024C        UBR2

YLR025W       SNF7

YLR222C        UTP13

YML081C-A   ATP18

YML081W

YMR005W      TAF4

YMR092C       AIP1

YMR093W      UTP15

YNL059C       ARP5

YNL117W      MLS1

YNL118C       DCP2

YNL267W      PIK1

YOR056C       NOB1

YOR057W      SGT1

YOR310C       NOP58

YPL012W       RRP12

YPL013C

YPL232W       SSO1

YPR017C        DSS4

YPR018W       RLF2

YPR104C        FHL1

YPR128C        ANT1

YPR129W       SCD6

 

Genes Not Found:

 

YBR012W-A

YBR012W-B

MIPS Functional Classification

Category          p-value In Category from Cluster          k          f

 

 

 

MIPS Phenotypes

Category          p-value In Category from Cluster          k          f

 

 

 

MIPS Subcellular Localization

Category          p-value In Category from Cluster          k          f

 

 

 

MIPS Protein Complexes

Category          p-value In Category from Cluster          k          f

 

 

 

MIPS Protein Classes

Category          p-value In Category from Cluster          k          f

 

 

 

GO Molecular Function

Category          p-value In Category from Cluster          k          f

 

 

 

GO Biological Process

Category          p-value In Category from Cluster          k          f

 

 

 

GO Cellular Component

Category          p-value In Category from Cluster          k          f

intracellular [GO:0005622]       0.000120651   NUP170 PET112 CDS1 YBR077C SEC18 NGR1 COP1 STE7 DHH1 SSF2 NHX1 RSC1 NUP57 TYS1 TFG1 PHB2 NAS6 PUP2 ENO1 YAP1801 RPN10 CST6 DSN1 DAL81 LAS21 MRPL8 FIP1 AUR1 TFA1 MAE1 RPC25 TIF1 SNF7 UTP13 ATP18 TAF4 AIP1 UTP15 ARP5 MLS1 DCP2 PIK1 NOB1 SGT1 NOP58 RRP12 SSO1 RLF2 FHL1 ANT1        50        2921

cell [GO:0005623]       0.000128761   NUP170 PET112 CDS1 YBR077C SEC18 NGR1 COP1 STE7 DHH1 SSF2 NHX1 RSC1 NUP57 TYS1 TFG1 PHB2 NAS6 PUP2 ENO1 YAP1801 RPN10 CST6 PRM2 DSN1 DAL81 LAS21 MRPL8 FIP1 AUR1 TFA1 MAE1 RPC25 TIF1 SNF7 UTP13 ATP18 TAF4 AIP1 UTP15 ARP5 MLS1 DCP2 PIK1 NOB1 SGT1 NOP58 RRP12 SSO1 DSS4 RLF2 FHL1 ANT1          52        3106

 

 

 

SMART Domains

Category          p-value In Category from Cluster          k          f

 

 

 

PFam-A Domains

Category          p-value In Category from Cluster          k          f

 

 

 

Yeast Two Hybrid - Uetz

Category          p-value In Category from Cluster          k          f

 

 

 

Yeast Two Hybrid - Ito (core)

Category          p-value In Category from Cluster          k          f

 

 

 

Yeast Two Hybrid - Ito (full)

Category          p-value In Category from Cluster          k          f

 

 

 

Synthetic Genetic Array Analysis

Category          p-value In Category from Cluster          k          f

 

 

 

MDS Proteomics Complexes

Category          p-value In Category from Cluster          k          f

 

 

 

Cellzome Complexes

Category          p-value In Category from Cluster          k          f

 

 

 

Proteome Localization--Observed

Category          p-value In Category from Cluster          k          f

 

 

 

Proteome Localization--Predicted+Observed

Category          p-value In Category from Cluster          k          f

 

 

 

Deletions Consortium (Essentiality, Morphology)

Category          p-value In Category from Cluster          k          f

essential            0.000160021   IPP1 CDS1 SEC18 AME1 COP1 GUK1 NUP57 TYS1 TFG1 PUP2 NEO1 DSN1 FIP1 AUR1 TFA1 RPC25 UTP13 TAF4 UTP15 DCP2 PIK1 NOB1 SGT1 NOP58 RRP12 FHL1 26        1101

 

 

 

Yeast Fitness Data

Category          p-value In Category from Cluster          k          f

 

 

 

Published Complexes

Category          p-value In Category from Cluster          k          f


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Abf1-ChIPandnotPBM-exact.FunSpec.txt

Input Cluster (n=21)

YBR011C        IPP1

YDL010W

YDL012C

YDL145C        COP1

YDL189W       RBS1

YDL190C        UFD2

YDR454C       GUK1

YDR456W      NHX1

YGR231C       PHB2

YGR232W      NAS6

YGR253C       PUP2

YGR254W      ENO1

YJL062W        LAS21

YJL062W-A

YJL063C         MRPL8

YKL028W      TFA1

YKL029C       MAE1

YKL143W      LTV1

YKL144C       RPC25

YKR059W      TIF1

YNL059C       ARP5

 

Genes Not Found:

 

YBR012W-A

YBR012W-B

MIPS Functional Classification

Category          p-value In Category from Cluster          k          f

 

 

 

MIPS Phenotypes

Category          p-value In Category from Cluster          k          f

 

 

 

MIPS Subcellular Localization

Category          p-value In Category from Cluster          k          f

 

 

 

MIPS Protein Complexes

Category          p-value In Category from Cluster          k          f

 

 

 

MIPS Protein Classes

Category          p-value In Category from Cluster          k          f

 

 

 

GO Molecular Function

Category          p-value In Category from Cluster          k          f

 

 

 

GO Biological Process

Category          p-value In Category from Cluster          k          f

 

 

 

GO Cellular Component

Category          p-value In Category from Cluster          k          f

 

 

 

SMART Domains

Category          p-value In Category from Cluster          k          f

 

 

 

PFam-A Domains

Category          p-value In Category from Cluster          k          f

 

 

 

Yeast Two Hybrid - Uetz

Category          p-value In Category from Cluster          k          f

 

 

 

Yeast Two Hybrid - Ito (core)

Category          p-value In Category from Cluster          k          f

 

 

 

Yeast Two Hybrid - Ito (full)

Category          p-value In Category from Cluster          k          f

 

 

 

Synthetic Genetic Array Analysis

Category          p-value In Category from Cluster          k          f

 

 

 

MDS Proteomics Complexes

Category          p-value In Category from Cluster          k          f

 

 

 

Cellzome Complexes

Category          p-value In Category from Cluster          k          f

 

 

 

Proteome Localization--Observed

Category          p-value In Category from Cluster          k          f

 

 

 

Proteome Localization--Predicted+Observed

Category          p-value In Category from Cluster          k          f

 

 

 

Deletions Consortium (Essentiality, Morphology)

Category          p-value In Category from Cluster          k          f

 

 

 

Yeast Fitness Data

Category          p-value In Category from Cluster          k          f

 

 

 

Published Complexes

Category          p-value In Category from Cluster          k          f


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Rap1-PBM-alldata.FunSpec.txt

 Input Cluster (n=411)

YAL033W       POP5

YAL034C        FUN19

YAL051W       OAF1

YBL022C        PIM1

YBL027W       RPL19B

YBL028C

YBL029C-A

YBL029W

YBL049W

YBL060W

YBL061C        SKT5

YBL069W       AST1

YBL071W-A   KTI11

YBL072C        RPS8A

YBL087C        RPL23A

YBR048W       RPS11B

YBR052C

YBR060C        ORC2

YBR084C-A   RPL19A

YBR085W       AAC3

YBR117C        TKL2

YBR118W       TEF2

YBR149W       ARA1

YBR179C        FZO1

YBR180W       DTR1

YBR181C        RPS6B

YBR188C        NTC20

YBR189W       RPS9B

YBR191W       RPL21A

YBR196C        PGI1

YBR204C

YBR205W       KTR3

YBR295W       PCA1

YCL024W       KCC4

YCL025C        AGP1

YCL030C        HIS4

YCL036W       GFD2

YCL037C        SRO9

YCR011C       ADP1

YCR012W      PGK1

YDL022W       GPD1

YDL055C        PSA1

YDL060W       TSR1

YDL061C        RPS29B

YDL075W       RPL31A

YDL076C        RXT3

YDL082W       RPL13A

YDL083C        RPS16B

YDL130W       RPP1B

YDL133C-A   RPL41B

YDL133W

YDL136W       RPL35B

YDL168W       SFA1

YDL169C        UGX2

YDL184C        RPL41A

YDL186W

YDL188C        PPH22

YDL191W       RPL35A

YDL229W       SSB1

YDL235C        YPD1

YDR036C

YDR037W      KRS1

YDR050C       TPI1

YDR064W      RPS13

YDR070C

YDR079C-A

YDR080W      VPS41

YDR109C

YDR110W      FOB1

YDR119W

YDR249C

YDR251W      PAM1

YDR258C       HSP78

YDR264C       AKR1

YDR265W      PEX10

YDR275W

YDR276C       PMP3

YDR300C       PRO1

YDR301W      CFT1

YDR324C       UTP4

YDR325W      YCG1

YDR393W      SHE9

YDR408C       ADE8

YDR409W      SIZ1

YDR418W      RPL12B

YDR447C       RPS17B

YDR448W      ADA2

YDR449C       UTP6

YDR450W      RPS18A

YDR470C       UGO1

YDR471W      RPL27B

YDR500C       RPL37B

YDR501W      PLM2

YEL007W

YEL009C        GCN4

YEL020W-A   TIM9

YEL022W       GEA2

YEL023C

YEL054C        RPL12A

YER031C        YPT31

YER032W       FIR1

YER033C        ZRG8

YER034W

YER045C        ACA1

YER046W       SPO73

YER047C        SAP1

YER056C-A    RPL34A

YER066W

YER074W       RPS24A

YER101C        AST2

YER102W       RPS8B

YER116C        SLX8

YER117W       RPL23B

YER130C

YER131W       RPS26B

YER158C

YER168C        CCA1

YER169W       RPH1

YFL021W       GAT1

YFL022C        FRS2

YFL023W       BUD27

YFL024C        EPL1

YFL034C-A    RPL22B

YFL034W

YFL051C

YFR031C-A    RPL2A

YFR032C

YFR032C-A    RPL29

YGL030W       RPL30

YGL031C        RPL24A

YGL045W

YGL071W       RCS1

YGL073W       HSF1

YGL075C        MPS2

YGL083W       SCY1

YGL084C        GUP1

YGL103W       RPL28

YGL104C        VPS73

YGL115W       SNF4

YGL123W       RPS2

YGL124C        MON1

YGL135W       RPL1B

YGL136C        MRM2

YGL147C        RPL9A

YGL189C        RPS26A

YGL258W       VEL1

YGR027C       RPS25A

YGR032W      GSC2

YGR033C

YGR034W      RPL26B

YGR052W

YGR085C       RPL11B

YGR117C

YGR118W      RPS23A

YGR180C       RNR4

YGR192C       TDH3

YGR213C       RTA1

YGR214W      RPS0A

YGR233C       PHO81

YGR234W      YHB1

YHL001W       RPL14B

YHL033C        RPL8A

YHL036W       MUP3

YHL038C        CBP2

YHR021C       RPS27B

YHR021W-A  ECM12

YHR033W

YHR096C       HXT5

YHR122W

YHR141C       RPL42B

YHR142W      CHS7

YHR193C       EGD2

YHR194W      MDM31

YHR203C       RPS4B

YHR204W      MNL1

YIL001W

YIL002C         INP51

YIL018W        RPL2B

YIL053W        RHR2

YIL055C

YIL133C         RPL16A

YIL148W        RPL40A

YIL149C         MLP2

YJL049W

YJL062W        LAS21

YJL062W-A

YJL063C         MRPL8

YJL076W        NET1

YJL077C         ICS3

YJL089W        SIP4

YJL090C         DPB11

YJL091C

YJL134W        LCB3

YJL136C         RPS21B

YJL148W        RPA34

YJL189W        RPL39

YJL190C         RPS22A

YJL191W        RPS14B

YJL192C

YJR058C         APS2

YJR059W        PTK2

YJR073C         OPI3

YJR074W        MOG1

YJR083C

YJR084W        CSN12

YJR123W        RPS5

YJR134C         SGM1

YJR139C         HOM6

YJR145C         RPS4A

YJR147W        HMS2

YKL006C-A   SFT1

YKL006W      RPL14A

YKL009W      MRT4

YKL010C       UFD4

YKL015W      PUT3

YKL016C       ATP7

YKL019W      RAM2

YKL020C       SPT23

YKL033W

YKL081W      TEF4

YKL082C

YKL096W      CWP1

YKL150W      MCR1

YKL151C

YKL156W      RPS27A

YKL175W      ZRT3

YKL176C       LST4

YKL178C       STE3

YKL180W      RPL17A

YKL182W      FAS1

YKR057W      RPS21A

YKR092C       SRP40

YKR093W      PTR2

YKR094C       RPL40B

YKR095W      MLP1

YKR102W      FLO10

YLL039C        UBI4

YLL051C        FRE6

YLR003C

YLR004C

YLR005W       SSL1

YLR023C

YLR044C        PDC1

YLR047C

YLR048W       RPS0B

YLR061W       RPL22A

YLR074C        BUD20

YLR075W       RPL10

YLR103C        CDC45

YLR104W

YLR166C        SEC10

YLR167W       RPS31

YLR208W       SEC13

YLR213C        CRR1

YLR214W       FRE1

YLR249W       YEF3

YLR254C

YLR256W       HAP1

YLR286C        CTS1

YLR287C-A    RPS30A

YLR312C

YLR312W-A   MRPL15

YLR325C        RPL38

YLR326W

YLR333C        RPS25B

YLR344W       RPL26A

YLR387C

YLR388W       RPS29A

YLR390W-A   CCW14

YLR399C        BDF1

YLR406C        RPL31B

YLR407W

YLR413W

YLR437C

YLR438W       CAR2

YLR441C        RPS1A

YLR447C        VMA6

YLR448W       RPL6B

YLR452C        SST2

YML010W      SPT5

YML011C

YML024W      RPS17A

YML025C

YML026C       RPS18B

YML063W      RPS1B

YML064C       TEM1

YML073C       RPL6A

YMR013C       SEC59

YMR013W-A

YMR014W      BUD22

YMR015C       ERG5

YMR026C       PEX12

YMR027W      HRT2

YMR087W

YMR092C       AIP1

YMR093W      UTP15

YMR095C       SNO1

YMR096W      SNZ1

YMR116C       ASC1

YMR127C       SAS2

YMR128W      ECM16

YMR142C       RPL13B

YMR143W      RPS16A

YMR144W

YMR194W      RPL36A

YMR205C       PFK2

YMR206W

YMR229C       RRP5

YMR230W      RPS10B

YMR231W      PEP5

YMR242C       RPL20A

YMR243C       ZRC1

YMR244W

YMR251W

YMR265C

YMR266W      RSN1

YNL010W

YNL011C

YNL067W      RPL9B

YNL068C       FKH2

YNL069C       RPL16B

YNL096C       RPS7B

YNL101W

YNL142W      MEP2

YNL144C

YNL154C       YCK2

YNL186W      UBP10

YNL216W      RAP1

YNL253W

YNL254C

YNL288W      CAF40

YNL302C       RPS19B

YNR069C

YNR070W      PDR18

YOL039W      RPP2A

YOL040C       RPS15

YOL052C-A   DDR2

YOL059W      GPD2

YOL060C       MAM3

YOL082W      CVT19

YOL103W      ITR2

YOL109W

YOL120C       RPL18A

YOL121C       RPS19A

YOL127W      RPL25

YOL128C       YGK3

YOL136C       PFK27

YOL161C

YOR032C       HMS1

YOR043W      WHI2

YOR056C       NOB1

YOR057W      SGT1

YOR093C

YOR094W      ARF3

YOR095C       RKI1

YOR096W      RPS7A

YOR103C       OST2

YOR104W      PIN2

YOR113W      AZF1

YOR124C       UBP2

YOR161C

YOR179C

YOR234C       RPL33B

YOR267C       HRK1

YOR269W      PAC1

YOR292C

YOR293W      RPS10A

YOR302W

YOR303W      CPA1

YOR312C       RPL20B

YOR338W

YOR340C       RPA43

YOR341W      RPA190

YOR354C       MSC6

YOR355W      GDS1

YOR359W      VTS1

YOR365C

YOR367W      SCP1

YOR369C       RPS12

YPL016W       SWI1

YPL017C

YPL036W       PMA2

YPL037C        EGD1

YPL054W       LEE1

YPL055C        LGE1

YPL075W       GCR1

YPL081W       RPS9A

YPL082C        MOT1

YPL090C        RPS6A

YPL131W       RPL5

YPL143W       RPL33A

YPL162C

YPL198W       RPL7B

YPL199C

YPL220W       RPL1A

YPL229W

YPL249C-A    RPL36B

YPR029C        APL4

YPR030W       CSR2

YPR042C        PUF2

YPR043W       RPL43A

YPR057W       BRR1

YPR080W       TEF1

YPR102C        RPL11A

YPR103W       PRE2

YPR105C        COG4

YPR106W       ISR1

YPR110C        RPC40

YPR111W       DBF20

YPR135W       CTF4

YPR161C        SGV1

 

Genes Not Found:

 

LSR1

SNR128

SNR17A

SNR17B

SNR190

SNR34

SNR38

SNR40

SNR62

SNR72

SNR73

SNR74

SNR75

SNR76

SNR77

SNR78

TE%28UUC%29L

TK%28UUU%29D

TL%28UAA%29K

TP%28AGG%29C

TS%28UGA%29E

YBL071C-B

YBR196C-A

YBR196C-B

YFR032C-B

YGL188C-A

YGR027W-A

YGR027W-B

YLR264C-A

YLR406C-A

YLR412C-A

YMR230W-A

YMR242W-A

YNL067W-B

YOR032W-A

YOR161C-C

MIPS Functional Classification

Category          p-value In Category from Cluster          k          f

ribosome biogenesis      1e-14   RPL19B RPS8A RPL23A RPS11B RPL19A RPS6B RPS9B RPL21A RPS29B RPL31A RPL13A RPS16B RPP1B RPL41B RPL35B RPL41A RPL35A RPS13 RPL12B RPS17B RPS18A RPL27B RPL37B RPL12A RPL34A RPS24A RPS8B RPL23B RPS26B RPL22B RPL2A RPL29 RPL30 RPL24A RPL28 RPS2 RPL1B RPL9A RPS26A RPS25A RPL26B RPL11B RPS23A RPS0A RPL14B RPL8A RPS27B RPL42B RPS4B RPL2B RPL16A RPL40A MRPL8 RPS21B RPL39 RPS22A RPS14B RPS5 RPS4A RPL14A MRT4 RPS27A RPL17A RPS21A RPL40B RPS0B RPL22A RPL10 RPS31 RPS30A MRPL15 RPL38 RPS25B RPL26A RPS29A RPL31B RPS1A RPL6B RPS17A YML025C RPS18B RPS1B RPL6A ASC1 RPL13B RPS16A RPL36A RPS10B RPL20A RPL9B RPL16B RPS7B RPS19B RPP2A RPS15 RPL18A RPS19A RPL25 RPS7A RPL33B RPS10A RPL20B RPS12 RPS9A RPS6A RPL5 RPL33A RPL7B RPL1A RPL36B RPL43A RPL11A           112      215

PROTEIN SYNTHESIS          1e-14   RPL19B RPS8A RPL23A RPS11B RPL19A TEF2 RPS6B RPS9B RPL21A RPS29B RPL31A RPL13A RPS16B RPP1B RPL41B RPL35B RPL41A RPL35A SSB1 KRS1 RPS13 RPL12B RPS17B RPS18A RPL27B RPL37B RPL12A RPL34A RPS24A RPS8B RPL23B RPS26B FRS2 RPL22B RPL2A RPL29 RPL30 RPL24A RPL28 RPS2 RPL1B RPL9A RPS26A RPS25A RPL26B RPL11B RPS23A RPS0A RPL14B RPL8A RPS27B RPL42B RPS4B RPL2B RPL16A RPL40A MRPL8 RPS21B RPL39 RPS22A RPS14B RPS5 RPS4A RPL14A MRT4 TEF4 RPS27A RPL17A RPS21A RPL40B UBI4 SSL1 RPS0B RPL22A RPL10 RPS31 YEF3 RPS30A MRPL15 RPL38 RPS25B RPL26A RPS29A RPL31B RPS1A RPL6B RPS17A YML025C RPS18B RPS1B RPL6A ASC1 RPL13B RPS16A RPL36A RPS10B RPL20A RPL9B RPL16B RPS7B RAP1 RPS19B RPP2A RPS15 RPL18A RPS19A RPL25 RPS7A RPL33B RPS10A YOR302W RPL20B RPS12 RPS9A RPS6A RPL5 RPL33A RPL7B RPL1A RPL36B RPL43A TEF1 RPL11A      123      359

cytoplasm         1e-14   RPL19B RPS8A RPL23A RPS11B RPL19A TKL2 TEF2 RPS6B RPS9B RPL21A PGI1 PGK1 GPD1 RPS29B RPL31A RPL13A RPS16B RPP1B RPL41B RPL35B RPL41A RPL35A SSB1 KRS1 TPI1 RPS13 FOB1 PRO1 ADE8 RPL12B RPS17B RPS18A RPL27B RPL37B RPL12A RPL34A RPS24A RPS8B RPL23B RPS26B CCA1 FRS2 RPL29 RPL30 RPL24A RPL28 RPS2 RPL1B RPL9A RPS26A RPS25A RPL26B RPL11B RPS23A TDH3 RPS0A YHB1 RPL14B RPL8A RPS27B RPL42B EGD2 RPS4B RPL2B RPL16A RPL40A RPS21B RPL39 RPS22A RPS14B RPS5 RPS4A RPL14A UFD4 RAM2 TEF4 RPS27A RPL17A FAS1 RPS21A RPL40B UBI4 PDC1 RPS0B RPL10 SEC10 RPS31 YEF3 RPS30A RPL38 RPS25B RPL26A RPS29A RPL31B CAR2 RPS1A RPL6B RPS17A RPS18B RPS1B RPL6A ASC1 RPL13B RPS16A RPL36A PFK2 RPS10B RPL20A RPL9B RPL16B RPS7B RPS19B RPP2A RPS15 RPL18A RPS19A RPL25 RKI1 RPS7A UBP2 RPS10A YOR302W CPA1 RPL20B RPS12 RPS9A RPS6A RPL5 RPL33A RPL7B RPL1A RPL36B RPL43A TEF1 RPL11A             135      554

SUBCELLULAR LOCALISATION   1.67533e-13    POP5 OAF1 PIM1 RPL19B RPS8A RPL23A RPS11B ORC2 RPL19A AAC3 TKL2 TEF2 FZO1 RPS6B RPS9B RPL21A PGI1 YBR204C KCC4 AGP1 ADP1 PGK1 GPD1 RPS29B RPL31A RPL13A RPS16B RPP1B RPL41B RPL35B RPL41A RPL35A SSB1 KRS1 TPI1 RPS13 VPS41 FOB1 HSP78 PEX10 PRO1 CFT1 ADE8 RPL12B RPS17B ADA2 RPS18A RPL27B RPL37B GCN4 TIM9 GEA2 RPL12A YPT31 SAP1 RPL34A RPS24A RPS8B RPL23B RPS26B CCA1 GAT1 FRS2 YFL051C RPL29 RPL30 RPL24A RCS1 HSF1 MPS2 RPL28 SNF4 RPS2 RPL1B RPL9A RPS26A RPS25A GSC2 RPL26B RPL11B RPS23A RNR4 TDH3 RPS0A YHB1 RPL14B RPL8A MUP3 CBP2 RPS27B HXT5 RPL42B CHS7 EGD2 RPS4B RPL2B RPL16A RPL40A MLP2 LAS21 MRPL8 SIP4 DPB11 RPS21B RPA34 RPL39 RPS22A RPS14B APS2 OPI3 RPS5 RPS4A SFT1 RPL14A UFD4 PUT3 ATP7 RAM2 SPT23 TEF4 CWP1 MCR1 RPS27A STE3 RPL17A FAS1 RPS21A SRP40 PTR2 RPL40B MLP1 FLO10 UBI4 PDC1 RPS0B RPL10 CDC45 SEC10 RPS31 SEC13 FRE1 YEF3 HAP1 CTS1 RPS30A MRPL15 RPL38 RPS25B RPL26A RPS29A BDF1 RPL31B CAR2 RPS1A VMA6 RPL6B SST2 SPT5 RPS17A YML025C RPS18B RPS1B RPL6A SEC59 ERG5 PEX12 AIP1 ASC1 ECM16 RPL13B RPS16A RPL36A PFK2 RRP5 RPS10B PEP5 RPL20A ZRC1 RPL9B FKH2 RPL16B RPS7B MEP2 YCK2 RAP1 RPS19B RPP2A RPS15 GPD2 ITR2 RPL18A RPS19A RPL25 RKI1 RPS7A OST2 AZF1 UBP2 RPS10A YOR302W CPA1 RPL20B RPA43 RPA190 RPS12 SWI1 PMA2 EGD1 GCR1 RPS9A MOT1 RPS6A RPL5 RPL33A RPL7B RPL1A RPL36B RPL43A BRR1 TEF1 RPL11A PRE2 RPC40 CTF4           224      2256

 

 

 

MIPS Phenotypes

Category          p-value In Category from Cluster          k          f

 

 

 

MIPS Subcellular Localization

Category          p-value In Category from Cluster          k          f

cytoplasm         1e-14   RPL19B RPS8A RPL23A RPS11B RPL19A TKL2 TEF2 RPS6B RPS9B RPL21A PGI1 SRO9 PGK1 GPD1 RPS29B RPL31A RPL13A RPS16B RPP1B RPL41B RPL35B RPL41A RPL35A SSB1 KRS1 TPI1 RPS13 FOB1 PRO1 ADE8 RPL12B RPS17B RPS18A RPL27B RPL37B RPL12A RPL34A RPS24A RPS8B RPL23B RPS26B CCA1 FRS2 RPL29 RPL30 RPL24A RPL28 RPS2 RPL1B RPL9A RPS26A RPS25A RPL26B RPL11B RPS23A TDH3 RPS0A YHB1 RPL14B RPL8A RPS27B RPL42B EGD2 RPS4B RPL2B RPL16A RPL40A RPS21B RPL39 RPS22A RPS14B RPS5 RPS4A RPL14A UFD4 RAM2 TEF4 RPS27A RPL17A FAS1 RPS21A RPL40B UBI4 PDC1 RPS0B RPL22A RPL10 SEC10 RPS31 YEF3 RPS30A RPL38 RPS25B RPL26A RPS29A RPL31B CAR2 RPS1A RPL6B RPS17A RPS18B RPS1B RPL6A ASC1 RPL13B RPS16A RPL36A PFK2 RPS10B RPL20A RPL9B RPL16B RPS7B RPS19B RPP2A RPS15 RPL18A RPS19A RPL25 RKI1 RPS7A UBP2 RPL33B RPS10A YOR302W CPA1 RPL20B RPS12 EGD1 RPS9A RPS6A RPL5 RPL33A RPL7B RPL1A RPL36B RPL43A TEF1 RPL11A             139      593

 

 

 

MIPS Protein Complexes

Category          p-value In Category from Cluster          k          f

cytoplasmic ribosomal small subunit       1e-14   RPS8A RPS11B RPS6B RPS9B RPS29B RPS16B RPS13 RPS17B RPS18A RPS24A RPS8B RPS26B RPS2 RPS26A RPS25A RPS23A RPS0A RPS27B RPS4B RPS21B RPS22A RPS14B RPS5 RPS4A RPS27A RPS21A RPS0B RPS31 RPS30A RPS25B RPS29A RPS1A RPS17A RPS18B RPS1B ASC1 RPS16A RPS10B RPS7B RPS19B RPS15 RPS19A RPS7A RPS10A RPS12 RPS9A RPS6A          47            57

Cytoplasmic ribosomes 1e-14   RPL19B RPS8A RPL23A RPS11B RPL19A RPS6B RPS9B RPL21A RPS29B RPL31A RPL13A RPS16B RPP1B RPL41B RPL35B RPL41A RPL35A RPS13 RPL12B RPS17B RPS18A RPL27B RPL37B RPL12A RPL34A RPS24A RPS8B RPL23B RPS26B RPL22B RPL2A RPL29 RPL30 RPL24A RPL28 RPS2 RPL1B RPL9A RPS26A RPS25A RPL26B RPL11B RPS23A RPS0A RPL14B RPL8A RPS27B RPL42B RPS4B RPL2B RPL16A RPL40A RPS21B RPL39 RPS22A RPS14B RPS5 RPS4A RPL14A RPS27A RPL17A RPS21A RPL40B RPS0B RPL22A RPL10 RPS31 RPS30A RPL38 RPS25B RPL26A RPS29A RPL31B RPS1A RPL6B RPS17A RPS18B RPS1B RPL6A ASC1 RPL13B RPS16A RPL36A RPS10B RPL20A RPL9B RPL16B RPS7B RPS19B RPP2A RPS15 RPL18A RPS19A RPL25 RPS7A RPL33B RPS10A RPL20B RPS12 RPS9A RPS6A RPL5 RPL33A RPL7B RPL1A RPL36B RPL43A RPL11A   108      138

cytoplasmic ribosomal large subunit       1e-14   RPL19B RPL23A RPL19A RPL21A RPL31A RPL13A RPP1B RPL41B RPL35B RPL41A RPL35A RPL12B RPL27B RPL37B RPL12A RPL34A RPL23B RPL22B RPL2A RPL29 RPL30 RPL24A RPL28 RPL1B RPL9A RPL26B RPL11B RPL14B RPL8A RPL42B RPL2B RPL16A RPL40A RPL39 RPL14A RPL17A RPL40B RPL22A RPL10 RPL38 RPL26A RPL31B RPL6B RPL6A RPL13B RPL36A RPL20A RPL9B RPL16B RPP2A RPL18A RPL25 RPL33B RPL20B RPL5 RPL33A RPL7B RPL1A RPL36B RPL43A RPL11A          61        81

Translation complexes   1e-14   RPL19B RPS8A RPL23A RPS11B RPL19A TEF2 RPS6B RPS9B RPL21A RPS29B RPL31A RPL13A RPS16B RPP1B RPL41B RPL35B RPL41A RPL35A RPS13 RPL12B RPS17B RPS18A RPL27B RPL37B RPL12A RPL34A RPS24A RPS8B RPL23B RPS26B RPL22B RPL2A RPL29 RPL30 RPL24A RPL28 RPS2 RPL1B RPL9A RPS26A RPS25A RPL26B RPL11B RPS23A RPS0A RPL14B RPL8A RPS27B RPL42B RPS4B RPL2B RPL16A RPL40A MRPL8 RPS21B RPL39 RPS22A RPS14B RPS5 RPS4A RPL14A TEF4 RPS27A RPL17A RPS21A RPL40B RPS0B RPL22A RPL10 RPS31 YEF3 RPS30A MRPL15 RPL38 RPS25B RPL26A RPS29A RPL31B RPS1A RPL6B RPS17A RPS18B RPS1B RPL6A ASC1 RPL13B RPS16A RPL36A RPS10B RPL20A RPL9B RPL16B RPS7B RPS19B RPP2A RPS15 RPL18A RPS19A RPL25 RPS7A RPL33B RPS10A RPL20B RPS12 RPS9A RPS6A RPL5 RPL33A RPL7B RPL1A RPL36B RPL43A TEF1 RPL11A             114      240

 

 

 

MIPS Protein Classes

Category          p-value In Category from Cluster          k          f

Ubiquitin           0.000246012   RPL40A RPL40B UBI4 RPS31          4          6

 

 

 

GO Molecular Function

Category          p-value In Category from Cluster          k          f

structural constituent of ribosome [GO:0003735]          1e-14   RPL19B RPS8A RPL23A RPS11B RPL19A RPS6B RPS9B RPL21A RPS29B RPL31A RPL13A RPS16B RPP1B RPL41B RPL35B RPL41A RPL35A RPS13 RPL12B RPS17B RPS18A RPL27B RPL37B RPL12A RPL34A RPS24A RPS8B RPL23B RPS26B RPL22B RPL2A RPL29 RPL30 RPL24A RPL28 RPS2 RPL1B RPL9A RPS26A RPS25A RPL26B RPL11B RPS23A RPS0A RPL14B RPL8A RPS27B RPL42B RPS4B RPL2B RPL16A RPL40A MRPL8 RPS21B RPL39 RPS22A RPS14B RPS5 RPS4A RPL14A RPS27A RPL17A RPS21A RPL40B RPS0B RPL22A RPL10 RPS31 RPS30A MRPL15 RPL38 RPS25B RPL26A RPS29A RPL31B RPS1A RPL6B RPS17A YML025C RPS18B RPS1B RPL6A RPL13B RPS16A RPL36A RPS10B RPL20A RPL9B RPL16B RPS7B RPS19B RPP2A RPS15 RPL18A RPS19A RPL25 RPS7A RPL33B RPS10A RPL20B RPS12 RPS9A RPS6A RPL5 RPL33A RPL7B RPL1A RPL36B RPL43A RPL11A        110      206

structural molecule [GO:0005198]        1.11022e-14    RPL19B RPS8A RPL23A RPS11B RPL19A RPS6B RPS9B RPL21A RPS29B RPL31A RPL13A RPS16B RPP1B RPL41B RPL35B RPL41A RPL35A RPS13 RPL12B RPS17B RPS18A RPL27B RPL37B RPL12A RPL34A RPS24A RPS8B RPL23B RPS26B RPL22B RPL2A RPL29 RPL30 RPL24A MPS2 RPL28 RPS2 RPL1B RPL9A RPS26A RPS25A RPL26B RPL11B RPS23A RPS0A RPL14B RPL8A RPS27B RPL42B RPS4B RPL2B RPL16A RPL40A MRPL8 RPS21B RPL39 RPS22A RPS14B RPS5 RPS4A RPL14A CWP1 RPS27A RPL17A RPS21A RPL40B RPS0B RPL22A RPL10 RPS31 RPS30A MRPL15 RPL38 RPS25B RPL26A RPS29A CCW14 RPL31B RPS1A RPL6B RPS17A YML025C RPS18B RPS1B RPL6A RPL13B RPS16A RPL36A RPS10B RPL20A RPL9B RPL16B RPS7B RPS19B RPP2A RPS15 RPL18A RPS19A RPL25 RPS7A RPL33B RPS10A RPL20B RPS12 RPS9A RPS6A RPL5 RPL33A RPL7B RPL1A RPL36B RPL43A RPL11A             113      310

 

 

 

GO Biological Process

Category          p-value In Category from Cluster          k          f

protein biosynthesis [GO:0006412]       1e-14   RPL19B RPS8A RPL23A RPS11B RPL19A TEF2 RPS6B RPS9B RPL21A KTR3 SRO9 PSA1 RPS29B RPL31A RPL13A RPS16B RPP1B RPL41B RPL35B RPL41A PPH22 RPL35A SSB1 KRS1 RPS13 RPL12B RPS17B RPS18A RPL27B RPL37B RPL12A RPL34A RPS24A RPS8B RPL23B RPS26B CCA1 FRS2 RPL22B RPL2A RPL29 RPL30 RPL24A RPL28 RPS2 RPL1B RPL9A RPS26A RPS25A RPL26B RPL11B RPS23A RPS0A RPL14B RPL8A RPS27B RPL42B EGD2 RPS4B RPL2B RPL16A RPL40A LAS21 MRPL8 RPS21B RPL39 RPS22A RPS14B RPS5 RPS4A RPL14A TEF4 RPS27A RPL17A RPS21A RPL40B RPS0B RPL22A RPL10 RPS31 YEF3 RPS30A MRPL15 RPL38 RPS25B RPL26A RPS29A RPL31B RPS1A RPL6B RPS17A YML025C RPS18B RPS1B RPL6A SEC59 RPL13B RPS16A RPL36A RPS10B RPL20A RPL9B RPL16B RPS7B RPS19B RPP2A RPS15 RPL18A RPS19A RPL25 RPS7A OST2 RPL33B RPS10A RPL20B RPS12 EGD1 RPS9A RPS6A RPL5 RPL33A RPL7B RPL1A RPL36B RPL43A TEF1 RPL11A     127      415

macromolecule biosynthesis [GO:0009059]      1e-14   RPL19B SKT5 RPS8A RPL23A RPS11B RPL19A TEF2 RPS6B RPS9B RPL21A KTR3 SRO9 PSA1 RPS29B RPL31A RPL13A RPS16B RPP1B RPL41B RPL35B RPL41A PPH22 RPL35A SSB1 KRS1 RPS13 RPL12B RPS17B RPS18A RPL27B RPL37B RPL12A RPL34A RPS24A RPS8B RPL23B RPS26B CCA1 FRS2 RPL22B RPL2A RPL29 RPL30 RPL24A RPL28 RPS2 RPL1B RPL9A RPS26A RPS25A RPL26B RPL11B RPS23A RPS0A RPL14B RPL8A RPS27B RPL42B CHS7 EGD2 RPS4B RPL2B RPL16A RPL40A LAS21 MRPL8 RPS21B RPL39 RPS22A RPS14B RPS5 RPS4A RPL14A TEF4 RPS27A RPL17A RPS21A RPL40B RPS0B RPL22A RPL10 RPS31 YEF3 RPS30A MRPL15 RPL38 RPS25B RPL26A RPS29A RPL31B RPS1A RPL6B RPS17A YML025C RPS18B RPS1B RPL6A SEC59 RPL13B RPS16A RPL36A RPS10B RPL20A RPL9B RPL16B RPS7B RPS19B RPP2A RPS15 RPL18A RPS19A RPL25 RPS7A OST2 RPL33B RPS10A RPL20B RPS12 EGD1 RPS9A RPS6A RPL5 RPL33A RPL7B RPL1A RPL36B RPL43A TEF1 RPL11A   129      422

biosynthesis [GO:0009058]      1e-14   RPL19B SKT5 RPS8A RPL23A RPS11B RPL19A TEF2 RPS6B RPS9B RPL21A PGI1 KTR3 HIS4 SRO9 PGK1 PSA1 RPS29B RPL31A RPL13A RPS16B RPP1B RPL41B RPL35B RPL41A PPH22 RPL35A SSB1 KRS1 TPI1 RPS13 PRO1 ADE8 RPL12B RPS17B RPS18A RPL27B RPL37B GCN4 RPL12A RPL34A RPS24A RPS8B RPL23B RPS26B CCA1 FRS2 RPL22B RPL2A RPL29 RPL30 RPL24A RPL28 RPS2 RPL1B RPL9A RPS26A RPS25A GSC2 RPL26B RPL11B RPS23A TDH3 RPS0A RPL14B RPL8A RPS27B RPL42B CHS7 EGD2 RPS4B INP51 RPL2B RHR2 RPL16A RPL40A LAS21 MRPL8 SIP4 LCB3 RPS21B RPL39 RPS22A RPS14B OPI3 RPS5 RPS4A RPL14A TEF4 MCR1 RPS27A RPL17A FAS1 RPS21A RPL40B RPS0B RPL22A RPL10 RPS31 YEF3 RPS30A MRPL15 RPL38 RPS25B RPL26A RPS29A RPL31B RPS1A RPL6B RPS17A YML025C RPS18B RPS1B RPL6A SEC59 ERG5 RPL13B RPS16A RPL36A RPS10B RPL20A RPL9B RPL16B RPS7B RPS19B RPP2A RPS15 RPL18A RPS19A RPL25 RPS7A OST2 RPL33B RPS10A CPA1 RPL20B RPS12 EGD1 RPS9A RPS6A RPL5 RPL33A RPL7B RPL1A RPL36B RPL43A TEF1 RPL11A     147      731

protein metabolism [GO:0019538]        1e-14   PIM1 RPL19B AST1 RPS8A RPL23A RPS11B RPL19A TEF2 RPS6B RPS9B RPL21A KTR3 KCC4 SRO9 PSA1 RPS29B RPL31A RPL13A RPS16B RPP1B RPL41B RPL35B RPL41A PPH22 RPL35A SSB1 KRS1 RPS13 HSP78 SIZ1 RPL12B RPS17B ADA2 RPS18A RPL27B RPL37B TIM9 GEA2 RPL12A YPT31 RPL34A RPS24A RPS8B RPL23B RPS26B CCA1 FRS2 EPL1 RPL22B RPL2A RPL29 RPL30 RPL24A RPL28 VPS73 RPS2 MON1 RPL1B RPL9A RPS26A RPS25A RPL26B RPL11B RPS23A RPS0A RPL14B RPL8A RPS27B RPL42B CHS7 EGD2 RPS4B MNL1 RPL2B RPL16A RPL40A MLP2 LAS21 MRPL8 RPS21B RPL39 RPS22A RPS14B MOG1 RPS5 RPS4A SFT1 RPL14A UFD4 RAM2 TEF4 RPS27A LST4 RPL17A RPS21A RPL40B MLP1 UBI4 RPS0B RPL22A RPL10 SEC10 RPS31 SEC13 YEF3 RPS30A MRPL15 RPL38 RPS25B RPL26A RPS29A RPL31B RPS1A RPL6B RPS17A YML025C RPS18B RPS1B RPL6A SEC59 RPL13B RPS16A RPL36A RPS10B PEP5 RPL20A RPL9B RPL16B RPS7B YCK2 UBP10 RPS19B RPP2A RPS15 CVT19 RPL18A RPS19A RPL25 YGK3 NOB1 RPS7A OST2 UBP2 RPL33B RPS10A RPL20B VTS1 RPS12 EGD1 RPS9A RPS6A RPL5 RPL33A RPL7B RPL1A RPL36B RPL43A TEF1 RPL11A PRE2 COG4 DBF20 SGV1         163      1168

metabolism [GO:0008152]       2.11853e-12    POP5 OAF1 PIM1 RPL19B SKT5 AST1 RPS8A RPL23A RPS11B ORC2 RPL19A TKL2 TEF2 ARA1 RPS6B NTC20 RPS9B RPL21A PGI1 KTR3 KCC4 HIS4 SRO9 PGK1 PSA1 RPS29B RPL31A RPL13A RPS16B RPP1B RPL41B RPL35B SFA1 RPL41A PPH22 RPL35A SSB1 YPD1 KRS1 TPI1 RPS13 FOB1 HSP78 PRO1 CFT1 UTP4 ADE8 SIZ1 RPL12B RPS17B ADA2 UTP6 RPS18A RPL27B RPL37B GCN4 TIM9 GEA2 RPL12A YPT31 FIR1 ACA1 RPL34A RPS24A RPS8B SLX8 RPL23B RPS26B CCA1 RPH1 GAT1 FRS2 EPL1 RPL22B RPL2A RPL29 RPL30 RPL24A RCS1 GUP1 RPL28 VPS73 SNF4 RPS2 MON1 RPL1B MRM2 RPL9A RPS26A RPS25A GSC2 RPL26B RPL11B RPS23A RNR4 TDH3 RPS0A PHO81 RPL14B RPL8A CBP2 RPS27B RPL42B CHS7 EGD2 RPS4B MNL1 INP51 RPL2B RHR2 RPL16A RPL40A MLP2 LAS21 MRPL8 NET1 SIP4 DPB11 LCB3 RPS21B RPA34 RPL39 RPS22A RPS14B OPI3 MOG1 RPS5 HOM6 RPS4A SFT1 RPL14A UFD4 PUT3 RAM2 SPT23 TEF4 MCR1 RPS27A LST4 RPL17A FAS1 RPS21A RPL40B MLP1 UBI4 SSL1 PDC1 RPS0B RPL22A RPL10 CDC45 SEC10 RPS31 SEC13 YEF3 HAP1 RPS30A MRPL15 RPL38 RPS25B RPL26A RPS29A RPL31B CAR2 RPS1A RPL6B SPT5 RPS17A YML025C RPS18B RPS1B RPL6A SEC59 ERG5 UTP15 SNO1 SNZ1 SAS2 ECM16 RPL13B RPS16A RPL36A PFK2 RRP5 RPS10B PEP5 RPL20A ZRC1 RPL9B FKH2 RPL16B RPS7B YCK2 UBP10 RAP1 CAF40 RPS19B RPP2A RPS15 GPD2 CVT19 RPL18A RPS19A RPL25 YGK3 PFK27 NOB1 RKI1 RPS7A OST2 AZF1 UBP2 RPL33B RPS10A CPA1 RPL20B RPA43 RPA190 MSC6 GDS1 VTS1 RPS12 SWI1 EGD1 LGE1 GCR1 RPS9A MOT1 RPS6A RPL5 RPL33A RPL7B RPL1A RPL36B PUF2 RPL43A BRR1 TEF1 RPL11A PRE2 COG4 RPC40 DBF20 CTF4 SGV1 245      2693

cell growth and/or maintenance [GO:0008151] 3.53739e-12    POP5 OAF1 PIM1 RPL19B SKT5 AST1 KTI11 RPS8A RPL23A RPS11B ORC2 RPL19A AAC3 TKL2 TEF2 ARA1 FZO1 RPS6B NTC20 RPS9B RPL21A PGI1 KTR3 PCA1 KCC4 AGP1 HIS4 SRO9 ADP1 PGK1 GPD1 PSA1 TSR1 RPS29B RPL31A RPL13A RPS16B RPP1B RPL41B RPL35B SFA1 RPL41A PPH22 RPL35A SSB1 YPD1 YDR036C KRS1 TPI1 RPS13 VPS41 FOB1 PAM1 HSP78 AKR1 PEX10 PMP3 PRO1 CFT1 UTP4 YCG1 SHE9 ADE8 SIZ1 RPL12B RPS17B ADA2 UTP6 RPS18A UGO1 RPL27B RPL37B GCN4 TIM9 GEA2 RPL12A YPT31 FIR1 ACA1 SPO73 RPL34A RPS24A RPS8B SLX8 RPL23B RPS26B CCA1 RPH1 GAT1 FRS2 BUD27 EPL1 RPL22B RPL2A RPL29 RPL30 RPL24A RCS1 HSF1 MPS2 GUP1 RPL28 VPS73 SNF4 RPS2 MON1 RPL1B MRM2 RPL9A RPS26A RPS25A GSC2 RPL26B RPL11B RPS23A RNR4 TDH3 RPS0A PHO81 YHB1 RPL14B RPL8A MUP3 CBP2 RPS27B ECM12 HXT5 RPL42B CHS7 EGD2 MDM31 RPS4B MNL1 INP51 RPL2B RHR2 RPL16A RPL40A MLP2 LAS21 MRPL8 NET1 SIP4 DPB11 LCB3 RPS21B RPA34 RPL39 RPS22A RPS14B APS2 PTK2 OPI3 MOG1 RPS5 HOM6 RPS4A HMS2 SFT1 RPL14A MRT4 UFD4 PUT3 ATP7 RAM2 SPT23 TEF4 CWP1 MCR1 RPS27A ZRT3 LST4 STE3 RPL17A FAS1 RPS21A SRP40 PTR2 RPL40B MLP1 UBI4 SSL1 PDC1 RPS0B RPL22A BUD20 RPL10 CDC45 SEC10 RPS31 SEC13 FRE1 YEF3 HAP1 CTS1 RPS30A MRPL15 RPL38 RPS25B RPL26A RPS29A CCW14 BDF1 RPL31B CAR2 RPS1A VMA6 RPL6B SST2 SPT5 RPS17A YML025C RPS18B RPS1B TEM1 RPL6A SEC59 BUD22 ERG5 PEX12 AIP1 UTP15 SNO1 SNZ1 SAS2 ECM16 RPL13B RPS16A RPL36A PFK2 RRP5 RPS10B PEP5 RPL20A ZRC1 RPL9B FKH2 RPL16B RPS7B MEP2 YCK2 UBP10 RAP1 CAF40 RPS19B RPP2A RPS15 DDR2 GPD2 MAM3 CVT19 ITR2 RPL18A RPS19A RPL25 YGK3 PFK27 HMS1 WHI2 NOB1 SGT1 ARF3 RKI1 RPS7A OST2 AZF1 UBP2 RPL33B HRK1 PAC1 RPS10A CPA1 RPL20B RPA43 RPA190 MSC6 GDS1 VTS1 RPS12 SWI1 PMA2 EGD1 LGE1 GCR1 RPS9A MOT1 RPS6A RPL5 RPL33A RPL7B RPL1A RPL36B APL4 CSR2 PUF2 RPL43A BRR1 TEF1 RPL11A PRE2 COG4 RPC40 DBF20 CTF4 SGV1    305      3657

ribosomal subunit assembly [GO:0042257]       3.55798e-09    RPS11B RPL12B RPS17B RPL12A RPL11B RPS0A RPS14B RPS0B RPL10 RPS31 RPL6B RPS17A YML025C RPL6A RPL25 RPL5 RPL11A           17        48

ribosome assembly [GO:0042255]       7.30303e-09    RPS11B RPL12B RPS17B RPL12A RPL11B RPS0A RPS14B RPS0B RPL10 RPS31 RPL6B RPS17A YML025C RPL6A RPL25 RPL5 RPL11A 17        50

ribosomal small subunit assembly and maintenance [GO:0000028]         6.02554e-06    RPS11B RPS17B RPS0A RPS14B RPS0B RPS31 RPS17A       7          13

ribosome biogenesis and assembly [GO:0042254]        2.21484e-05    POP5 RPS11B TSR1 UTP4 RPL12B RPS17B UTP6 RPL12A RPL30 RPL11B RPS0A RPS14B MRT4 RPS0B RPL10 RPS31 RPL6B RPS17A YML025C RPL6A UTP15 ECM16 RRP5 RPL25 RPL5 RPL11A            26        165

regulation of translational fidelity [GO:0006450]            2.22849e-05    RPS11B RPS9B RPS2 RPS23A RPS9A         5            7

 

 

 

GO Cellular Component

Category          p-value In Category from Cluster          k          f

eukaryotic 48S initiation complex [GO:0016283]          1e-14   RPS8A RPS11B RPS6B RPS9B RPS29B RPS16B RPS13 RPS17B RPS18A RPS24A RPS8B RPS26B RPS2 RPS26A RPS25A RPS23A RPS0A RPS27B RPS4B RPS21B RPS22A RPS14B RPS5 RPS4A RPS27A RPS21A RPS0B RPS31 RPS30A RPS25B RPS29A RPS1A RPS17A RPS18B RPS1B RPS16A RPS10B RPS7B RPS19B RPS15 RPS19A RPS7A RPS10A RPS12 RPS9A RPS6A            46        61

cytosolic small ribosomal subunit (sensu Eukarya) [GO:0005843]          1e-14   RPS8A RPS11B RPS6B RPS9B RPS29B RPS16B RPS13 RPS17B RPS18A RPS24A RPS8B RPS26B RPS2 RPS26A RPS25A RPS23A RPS0A RPS27B RPS4B RPS21B RPS22A RPS14B RPS5 RPS4A RPS27A RPS21A RPS0B RPS31 RPS30A RPS25B RPS29A RPS1A RPS17A RPS18B RPS1B RPS16A RPS10B RPS7B RPS19B RPS15 RPS19A RPS7A RPS10A RPS12 RPS9A RPS6A            46        61

cytosolic large ribosomal subunit (sensu Eukarya) [GO:0005842]          1e-14   RPL19B RPL23A RPL19A RPL21A RPL31A RPL13A RPP1B RPL41B RPL35B RPL41A RPL35A RPL12B RPL27B RPL37B RPL12A RPL34A RPL23B RPL22B RPL2A RPL29 RPL30 RPL24A RPL28 RPL1B RPL9A RPL26B RPL11B RPL14B RPL8A RPL42B RPL2B RPL16A RPL40A RPL39 RPL14A RPL17A RPL40B RPL22A RPL10 RPL38 RPL26A RPL31B RPL6B RPL6A RPL13B RPL36A RPL20A RPL9B RPL16B RPP2A RPL18A RPL25 RPL33B RPL20B RPL5 RPL33A RPL7B RPL1A RPL36B RPL43A RPL11A    61        83

cytosolic ribosome (sensu Eukarya) [GO:0005830]       1e-14   RPL19B RPS8A RPL23A RPS11B RPL19A RPS6B RPS9B RPL21A RPS29B RPL31A RPL13A RPS16B RPP1B RPL41B RPL35B RPL41A RPL35A RPS13 RPL12B RPS17B RPS18A RPL27B RPL37B RPL12A RPL34A RPS24A RPS8B RPL23B RPS26B RPL22B RPL2A RPL29 RPL30 RPL24A RPL28 RPS2 RPL1B RPL9A RPS26A RPS25A RPL26B RPL11B RPS23A RPS0A RPL14B RPL8A RPS27B RPL42B RPS4B RPL2B RPL16A RPL40A RPS21B RPL39 RPS22A RPS14B RPS5 RPS4A RPL14A RPS27A RPL17A RPS21A RPL40B RPS0B RPL22A RPL10 RPS31 RPS30A RPL38 RPS25B RPL26A RPS29A RPL31B RPS1A RPL6B RPS17A RPS18B RPS1B RPL6A RPL13B RPS16A RPL36A RPS10B RPL20A RPL9B RPL16B RPS7B RPS19B RPP2A RPS15 RPL18A RPS19A RPL25 RPS7A RPL33B RPS10A RPL20B RPS12 RPS9A RPS6A RPL5 RPL33A RPL7B RPL1A RPL36B RPL43A RPL11A 107      151

eukaryotic 43S pre-initiation complex [GO:0016282]    1e-14   RPS8A RPS11B RPS6B RPS9B RPS29B RPS16B RPS13 RPS17B RPS18A RPS24A RPS8B RPS26B RPS2 RPS26A RPS25A RPS23A RPS0A RPS27B RPS4B RPS21B RPS22A RPS14B RPS5 RPS4A RPS27A RPS21A RPS0B RPS31 RPS30A RPS25B RPS29A RPS1A RPS17A RPS18B RPS1B RPS16A RPS10B RPS7B RPS19B RPS15 RPS19A RPS7A RPS10A RPS12 RPS9A RPS6A            46        67

large ribosomal subunit [GO:0015934]  1e-14   RPL19B RPL23A RPL19A RPL21A RPL31A RPL13A RPP1B RPL41B RPL35B RPL41A RPL35A RPL12B RPL27B RPL37B RPL12A RPL34A RPL23B RPL22B RPL2A RPL29 RPL30 RPL24A RPL28 RPL1B RPL9A RPL26B RPL11B RPL14B RPL8A RPL42B RPL2B RPL16A RPL40A MRPL8 RPL39 RPL14A RPL17A RPL40B RPL22A RPL10 MRPL15 RPL38 RPL26A RPL31B RPL6B YML025C RPL6A RPL13B RPL36A RPL20A RPL9B RPL16B RPP2A RPL18A RPL25 RPL33B RPL20B RPL5 RPL33A RPL7B RPL1A RPL36B RPL43A RPL11A    64        122

small ribosomal subunit [GO:0015935] 1e-14   RPS8A RPS11B RPS6B RPS9B RPS29B RPS16B RPS13 RPS17B RPS18A RPS24A RPS8B RPS26B RPS2 RPS26A RPS25A RPS23A RPS0A RPS27B RPS4B RPS21B RPS22A RPS14B RPS5 RPS4A RPS27A RPS21A RPS0B RPS31 RPS30A RPS25B RPS29A RPS1A RPS17A RPS18B RPS1B RPS16A RPS10B RPS7B RPS19B RPS15 RPS19A RPS7A RPS10A RPS12 RPS9A RPS6A         46        88

ribosome [GO:0005840]          1e-14   RPL19B RPS8A RPL23A RPS11B RPL19A TEF2 RPS6B RPS9B RPL21A SRO9 RPS29B RPL31A RPL13A RPS16B RPP1B RPL41B RPL35B RPL41A RPL35A SSB1 RPS13 RPL12B RPS17B RPS18A RPL27B RPL37B RPL12A RPL34A RPS24A RPS8B RPL23B RPS26B RPL22B RPL2A RPL29 RPL30 RPL24A RPL28 RPS2 RPL1B RPL9A RPS26A RPS25A RPL26B RPL11B RPS23A RPS0A RPL14B RPL8A RPS27B RPL42B RPS4B RPL2B RPL16A RPL40A MRPL8 RPS21B RPL39 RPS22A RPS14B RPS5 RPS4A RPL14A TEF4 RPS27A RPL17A RPS21A RPL40B RPS0B RPL22A RPL10 RPS31 YEF3 RPS30A MRPL15 RPL38 RPS25B RPL26A RPS29A RPL31B RPS1A RPL6B RPS17A YML025C RPS18B RPS1B RPL6A RPL13B RPS16A RPL36A RPS10B RPL20A RPL9B RPL16B RPS7B RPS19B RPP2A RPS15 RPL18A RPS19A RPL25 RPS7A RPL33B RPS10A RPL20B RPS12 RPS9A RPS6A RPL5 RPL33A RPL7B RPL1A RPL36B RPL43A TEF1 RPL11A             116      258

cytosol [GO:0005829] 1.11022e-14    RPL19B RPS8A RPL23A RPS11B RPL19A RPS6B RPS9B RPL21A PGI1 PGK1 RPS29B RPL31A RPL13A RPS16B RPP1B RPL41B RPL35B RPL41A RPL35A TPI1 RPS13 RPL12B RPS17B RPS18A RPL27B RPL37B RPL12A RPL34A RPS24A RPS8B RPL23B RPS26B RPL22B RPL2A RPL29 RPL30 RPL24A RPL28 RPS2 RPL1B RPL9A RPS26A RPS25A RPL26B RPL11B RPS23A TDH3 RPS0A RPL14B RPL8A RPS27B RPL42B RPS4B RPL2B RPL16A RPL40A RPS21B RPL39 RPS22A RPS14B RPS5 RPS4A RPL14A RPS27A RPL17A FAS1 RPS21A RPL40B RPS0B RPL22A RPL10 RPS31 RPS30A RPL38 RPS25B RPL26A RPS29A RPL31B RPS1A RPL6B RPS17A RPS18B RPS1B RPL6A RPL13B RPS16A RPL36A PFK2 RPS10B RPL20A RPL9B RPL16B RPS7B RPS19B RPP2A RPS15 GPD2 RPL18A RPS19A RPL25 NOB1 RPS7A RPL33B RPS10A CPA1 RPL20B VTS1 RPS12 RPS9A RPS6A RPL5 RPL33A RPL7B RPL1A RPL36B RPL43A RPL11A PRE2            118      310

ribonucleoprotein complex [GO:0030529]        1.69864e-14    POP5 RPL19B RPS8A RPL23A RPS11B RPL19A TEF2 RPS6B NTC20 RPS9B RPL21A SRO9 RPS29B RPL31A RPL13A RPS16B RPP1B RPL41B RPL35B RPL41A RPL35A SSB1 RPS13 UTP4 RPL12B RPS17B UTP6 RPS18A RPL27B RPL37B RPL12A RPL34A RPS24A RPS8B RPL23B RPS26B RPL22B RPL2A RPL29 RPL30 RPL24A RPL28 RPS2 RPL1B RPL9A RPS26A RPS25A RPL26B RPL11B RPS23A RPS0A RPL14B RPL8A RPS27B RPL42B RPS4B RPL2B RPL16A RPL40A MRPL8 RPS21B RPL39 RPS22A RPS14B RPS5 RPS4A RPL14A TEF4 RPS27A RPL17A RPS21A RPL40B RPS0B RPL22A RPL10 RPS31 YEF3 RPS30A MRPL15 RPL38 RPS25B RPL26A RPS29A RPL31B RPS1A RPL6B RPS17A YML025C RPS18B RPS1B RPL6A UTP15 ECM16 RPL13B RPS16A RPL36A RRP5 RPS10B RPL20A RPL9B RPL16B RPS7B RPS19B RPP2A RPS15 RPL18A RPS19A RPL25 RPS7A RPL33B RPS10A RPL20B RPS12 RPS9A RPS6A RPL5 RPL33A RPL7B RPL1A RPL36B RPL43A BRR1 TEF1 RPL11A       124      380

cytoplasm [GO:0005737]         2.04281e-14    PIM1 RPL19B SKT5 RPS8A RPL23A RPS11B RPL19A AAC3 TEF2 FZO1 RPS6B RPS9B RPL21A PGI1 SRO9 ADP1 PGK1 GPD1 PSA1 RPS29B RPL31A RPL13A RPS16B RPP1B RPL41B RPL35B RPL41A RPL35A SSB1 YPD1 KRS1 TPI1 RPS13 VPS41 HSP78 SHE9 RPL12B RPS17B RPS18A UGO1 RPL27B RPL37B TIM9 GEA2 RPL12A RPL34A RPS24A AST2 RPS8B RPL23B RPS26B CCA1 FRS2 RPL22B RPL2A RPL29 RPL30 RPL24A RCS1 MPS2 RPL28 SNF4 RPS2 RPL1B MRM2 RPL9A RPS26A RPS25A GSC2 RPL26B RPL11B RPS23A TDH3 RPS0A RPL14B RPL8A CBP2 RPS27B YHR033W RPL42B CHS7 EGD2 RPS4B MNL1 RPL2B RPL16A RPL40A LAS21 MRPL8 LCB3 RPS21B RPL39 RPS22A RPS14B APS2 OPI3 RPS5 RPS4A SFT1 RPL14A ATP7 RAM2 SPT23 TEF4 MCR1 RPS27A ZRT3 LST4 RPL17A FAS1 RPS21A RPL40B UBI4 RPS0B RPL22A RPL10 SEC10 RPS31 SEC13 YEF3 CTS1 RPS30A MRPL15 RPL38 RPS25B RPL26A RPS29A RPL31B YLR437C CAR2 RPS1A VMA6 RPL6B RPS17A YML025C RPS18B RPS1B TEM1 RPL6A ERG5 PEX12 AIP1 ASC1 RPL13B RPS16A RPL36A PFK2 RPS10B PEP5 RPL20A ZRC1 RPL9B RPL16B RPS7B RPS19B RPP2A RPS15 GPD2 CVT19 RPL18A RPS19A RPL25 PFK27 NOB1 RPS7A OST2 UBP2 RPL33B PAC1 RPS10A CPA1 RPL20B VTS1 RPS12 EGD1 RPS9A RPS6A RPL5 RPL33A RPL7B RPL1A RPL36B APL4 RPL43A TEF1 RPL11A PRE2 COG4            188      1810

intracellular [GO:0005622]       1.14624e-10    POP5 OAF1 PIM1 RPL19B SKT5 RPS8A RPL23A RPS11B ORC2 RPL19A AAC3 TEF2 FZO1 RPS6B NTC20 RPS9B RPL21A PGI1 AGP1 SRO9 ADP1 PGK1 GPD1 PSA1 TSR1 RPS29B RPL31A RPL13A RPS16B RPP1B RPL41B RPL35B RPL41A RPL35A SSB1 YPD1 KRS1 TPI1 RPS13 VPS41 FOB1 HSP78 PMP3 CFT1 UTP4 YCG1 SHE9 SIZ1 RPL12B RPS17B ADA2 UTP6 RPS18A UGO1 RPL27B RPL37B GCN4 TIM9 GEA2 RPL12A ACA1 RPL34A RPS24A AST2 RPS8B SLX8 RPL23B RPS26B CCA1 RPH1 GAT1 FRS2 EPL1 RPL22B RPL2A RPL29 RPL30 RPL24A RCS1 HSF1 MPS2 RPL28 SNF4 RPS2 RPL1B MRM2 RPL9A RPS26A RPS25A GSC2 RPL26B RPL11B RPS23A RNR4 TDH3 RPS0A RPL14B RPL8A CBP2 RPS27B YHR033W HXT5 RPL42B CHS7 EGD2 RPS4B MNL1 RPL2B RPL16A RPL40A MLP2 LAS21 MRPL8 NET1 SIP4 DPB11 LCB3 RPS21B RPA34 RPL39 RPS22A RPS14B APS2 OPI3 MOG1 RPS5 RPS4A SFT1 RPL14A PUT3 ATP7 RAM2 SPT23 TEF4 MCR1 RPS27A ZRT3 LST4 STE3 RPL17A FAS1 RPS21A SRP40 PTR2 RPL40B MLP1 UBI4 SSL1 RPS0B RPL22A BUD20 RPL10 CDC45 SEC10 RPS31 SEC13 FRE1 YEF3 HAP1 CTS1 RPS30A MRPL15 RPL38 RPS25B RPL26A RPS29A BDF1 RPL31B YLR437C CAR2 RPS1A VMA6 RPL6B SST2 SPT5 RPS17A YML025C RPS18B RPS1B TEM1 RPL6A BUD22 ERG5 PEX12 AIP1 UTP15 ASC1 SAS2 ECM16 RPL13B RPS16A YMR144W RPL36A PFK2 RRP5 RPS10B PEP5 RPL20A ZRC1 RPL9B FKH2 RPL16B RPS7B MEP2 YCK2 UBP10 RAP1 CAF40 RPS19B RPP2A RPS15 GPD2 CVT19 RPL18A RPS19A RPL25 PFK27 NOB1 SGT1 RPS7A OST2 AZF1 UBP2 RPL33B PAC1 RPS10A CPA1 RPL20B RPA43 RPA190 VTS1 RPS12 SWI1 PMA2 EGD1 GCR1 RPS9A MOT1 RPS6A RPL5 RPL33A RPL7B RPL1A RPL36B APL4 RPL43A BRR1 TEF1 RPL11A PRE2 COG4 RPC40 CTF4 SGV1      254      2921

cell [GO:0005623]       2.14789e-10    POP5 OAF1 PIM1 RPL19B SKT5 AST1 RPS8A RPL23A RPS11B ORC2 RPL19A AAC3 TEF2 FZO1 RPS6B NTC20 RPS9B RPL21A PGI1 KTR3 PCA1 KCC4 AGP1 HIS4 SRO9 ADP1 PGK1 GPD1 PSA1 TSR1 RPS29B RPL31A RPL13A RPS16B RPP1B RPL41B RPL35B RPL41A RPL35A SSB1 YPD1 KRS1 TPI1 RPS13 VPS41 FOB1 HSP78 PMP3 CFT1 UTP4 YCG1 SHE9 SIZ1 RPL12B RPS17B ADA2 UTP6 RPS18A UGO1 RPL27B RPL37B GCN4 TIM9 GEA2 RPL12A ACA1 RPL34A RPS24A AST2 RPS8B SLX8 RPL23B RPS26B CCA1 RPH1 GAT1 FRS2 EPL1 RPL22B RPL2A RPL29 RPL30 RPL24A RCS1 HSF1 MPS2 GUP1 RPL28 SNF4 RPS2 RPL1B MRM2 RPL9A RPS26A RPS25A GSC2 RPL26B RPL11B RPS23A RNR4 TDH3 RTA1 RPS0A RPL14B RPL8A MUP3 CBP2 RPS27B YHR033W HXT5 RPL42B CHS7 EGD2 RPS4B MNL1 INP51 RPL2B RPL16A RPL40A MLP2 LAS21 MRPL8 NET1 SIP4 DPB11 LCB3 RPS21B RPA34 RPL39 RPS22A RPS14B APS2 OPI3 MOG1 RPS5 RPS4A SFT1 RPL14A PUT3 ATP7 RAM2 SPT23 TEF4 MCR1 RPS27A ZRT3 LST4 STE3 RPL17A FAS1 RPS21A SRP40 PTR2 RPL40B MLP1 UBI4 SSL1 RPS0B RPL22A BUD20 RPL10 CDC45 SEC10 RPS31 SEC13 FRE1 YEF3 HAP1 CTS1 RPS30A MRPL15 RPL38 RPS25B RPL26A RPS29A BDF1 RPL31B YLR437C CAR2 RPS1A VMA6 RPL6B SST2 SPT5 RPS17A YML025C RPS18B RPS1B TEM1 RPL6A SEC59 BUD22 ERG5 PEX12 AIP1 UTP15 ASC1 SAS2 ECM16 RPL13B RPS16A YMR144W RPL36A PFK2 RRP5 RPS10B PEP5 RPL20A ZRC1 RPL9B FKH2 RPL16B RPS7B MEP2 YCK2 UBP10 RAP1 CAF40 RPS19B RPP2A RPS15 GPD2 CVT19 ITR2 RPL18A RPS19A RPL25 PFK27 NOB1 SGT1 RPS7A OST2 AZF1 UBP2 RPL33B PAC1 RPS10A CPA1 RPL20B RPA43 RPA190 VTS1 RPS12 SWI1 PMA2 EGD1 GCR1 RPS9A MOT1 RPS6A RPL5 RPL33A RPL7B RPL1A RPL36B APL4 RPL43A BRR1 TEF1 RPL11A PRE2 COG4 RPC40 CTF4 SGV1 265      3106

 

 

 

SMART Domains

Category          p-value In Category from Cluster          k          f

 

 

 

PFam-A Domains

Category          p-value In Category from Cluster          k          f

PF00467 (KOW)        1.25531e-07    RPL27B RPL26B RPL14B RPS4B RPS4A RPL14A RPL26A SPT5             8            12

 

 

 

Yeast Two Hybrid - Uetz

Category          p-value In Category from Cluster          k          f

 

 

 

Yeast Two Hybrid - Ito (core)

Category          p-value In Category from Cluster          k          f

 

 

 

Yeast Two Hybrid - Ito (full)

Category          p-value In Category from Cluster          k          f

 

 

 

Synthetic Genetic Array Analysis

Category          p-value In Category from Cluster          k          f

 

 

 

MDS Proteomics Complexes

Category          p-value In Category from Cluster          k          f

 

 

 

Cellzome Complexes

Category          p-value In Category from Cluster          k          f

YBR031W (RPL4A)   4.44311e-13    RPL13A RPL12B RPL27B RPL28 RPL11B RPL2B RPS14B RPL17A RPL10 RPL6A RPL13B RPL20A RPL16B RPL18A RPL25 RPL20B RPL33A RPL7B RPL36B      19        39

 

 

 

Proteome Localization--Observed

Category          p-value In Category from Cluster          k          f

cyto      0.000592532   FUN19 OAF1 RPL19B YBL029C-A RPS8A RPL19A TEF2 RPS6B PGI1 AGP1 HIS4 PGK1 GPD1 PSA1 RPL31A RPL13A SFA1 RPL41A PPH22 SSB1 KRS1 TPI1 AKR1 YDR275W PRO1 RPS17B RPS18A YEL007W GEA2 ZRG8 YER034W AST2 RPL23B RPS26B YER158C FRS2 BUD27 RPL22B YFR032C RPL29 RPL24A SNF4 RPS2 RPL1B RPL9A RPS26A RPL26B RPL11B YGR117C RPS23A TDH3 RPL8A YHR033W EGD2 INP51 RHR2 RPL16A YJL049W ICS3 RPS22A YJR083C RPS5 HOM6 RPS4A SFT1 RPL14A RAM2 YKL151C RPS27A RPL17A FAS1 UBI4 PDC1 RPL22A RPL10 RPS31 SEC13 YEF3 RPS30A RPL26A YLR437C CAR2 YML011C PEX12 SNZ1 ASC1 RPS16A PFK2 YMR251W YNL010W YNL011C RPL9B RPL16B RPS7B RPS15 MAM3 YOL109W RPL18A RPL25 YGK3 PFK27 WHI2 PAC1 VTS1 EGD1 LEE1 RPS9A RPL5 RPL7B YPL199C CSR2 PUF2 TEF1 RPL11A           114      1324

 

 

 

Proteome Localization--Predicted+Observed

Category          p-value In Category from Cluster          k          f

cyt        4.96104e-05    FUN19 OAF1 RPL19B YBL029W YBL049W YBL060W SKT5 AST1 RPS8A RPL23A RPS11B AAC3 TKL2 TEF2 ARA1 FZO1 DTR1 RPS6B RPS9B RPL21A PGI1 YBR204C PCA1 AGP1 HIS4 SRO9 PGK1 GPD1 PSA1 TSR1 RPS29B RPL31A RXT3 RPL13A RPS16B RPP1B YDL133W RPL35B SFA1 UGX2 RPL41A YDL186W PPH22 RPL35A SSB1 KRS1 TPI1 RPS13 YDR070C YDR109C FOB1 YDR119W AKR1 YDR275W PMP3 PRO1 ADE8 RPL12B RPS17B UTP6 RPS18A UGO1 RPL27B RPL37B YEL007W GEA2 YEL023C RPL12A ZRG8 YER034W SPO73 YER066W RPS24A AST2 RPS8B SLX8 RPL23B RPS26B YER158C FRS2 BUD27 YFR032C RPL30 RPL24A YGL045W RPL28 RPS2 MON1 RPL1B RPL9A RPS26A RPS25A GSC2 YGR033C RPL26B YGR052W RPL11B YGR117C RPS23A TDH3 RPS0A PHO81 YHB1 RPL14B RPL8A RPS27B YHR033W HXT5 YHR122W RPL42B CHS7 EGD2 RPS4B MNL1 YIL001W INP51 RPL2B RHR2 YIL055C RPL16A RPL40A YJL049W ICS3 SIP4 RPS21B RPL39 RPS22A RPS14B YJR083C RPS5 HOM6 RPS4A RPL14A UFD4 ATP7 RAM2 SPT23 TEF4 YKL082C YKL151C RPS27A RPL17A FAS1 RPS21A PTR2 RPL40B UBI4 YLR003C YLR004C PDC1 RPS0B RPL22A RPL10 RPS31 YEF3 YLR254C YLR312C RPL38 RPS25B RPL26A YLR387C RPS29A RPL31B YLR437C CAR2 RPS1A VMA6 RPL6B YML011C RPS17A RPS18B RPS1B RPL6A PEX12 HRT2 YMR087W SNO1 SNZ1 ASC1 RPL13B RPS16A RPL36A PFK2 YMR206W RPS10B PEP5 RPL20A YMR251W YMR265C YNL010W YNL011C RPL9B RPL16B RPS7B YNL101W MEP2 YNL144C YCK2 CAF40 RPS19B PDR18 RPP2A RPS15 ITR2 YOL109W RPL18A RPS19A RPL25 YGK3 PFK27 WHI2 SGT1 YOR093C RKI1 RPS7A OST2 UBP2 YOR161C YOR179C RPL33B HRK1 PAC1 YOR292C RPS10A CPA1 RPL20B VTS1 SCP1 RPS12 YPL017C PMA2 LEE1 RPS9A RPS6A RPL5 RPL33A YPL162C RPL7B YPL199C RPL1A YPL229W CSR2 PUF2 RPL43A TEF1 RPL11A PRE2 COG4 DBF20   249      3210

 

 

 

Deletions Consortium (Essentiality, Morphology)

Category          p-value In Category from Cluster          k          f

 

 

 

Yeast Fitness Data

Category          p-value In Category from Cluster          k          f

Slow Growers  0.000102447   RPL19B RPS11B RPL19A FZO1 RPS6B RPS9B RPL21A RPS29B RPL31A RPL35A AKR1 PMP3 PRO1 RPL12B RPS18A RPL34A RPS24A SLX8 RPL23B BUD27 RCS1 GUP1 SNF4 RPL1B RPS23A RNR4 RPS27B MDM31 RPS4B LAS21 RPS21B RPL39 RPS4A RPL14A MRT4 ATP7 SRP40 PDC1 YLR047C RPL22A BUD20 MRPL15 BDF1 VMA6 RPL6B RPS17A RPS1B RPL6A BUD22 ASC1 RPL13B RPS16A PFK2 RSN1 RPL16B RPS19B RPS19A RPS7A PIN2 RPS10A YPL017C RPS6A RPL43A CTF4          64            617

 

 

 

Published Complexes

Category          p-value In Category from Cluster          k          f

Andersen et al. (2002) - Curr Bio 12:1-            1.17217e-09    RPS6B RPS9B RPL31A RPS13 RPL12B RPL27B RPS8B RPL28 RPL1B RPL26B RPL11B RPS0A RPL14B RPL2B RPL16A RPS5 RPS4A MRT4 RPL17A SRP40 UBI4 RPL22A RPL6B RPS18B RPS1B RPL13B RPS16A RRP5 RPL9B RPL25 RPA190 RPS12 RPL5 RPC40    34            165

Harnicharnpai et al. (2001) - Mol Cell 8:505-   0.0012759       SSB1 RPS2 TDH3 RPS22A MRT4 RPL10 RPS15 RPL5             8          34


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Rap1-PBM-2SD.FunSpec.txt

 Input Cluster (n=253)

YAL033W       POP5

YAL034C        FUN19

YBL022C        PIM1

YBL027W       RPL19B

YBL028C

YBL049W

YBL060W

YBL061C        SKT5

YBL069W       AST1

YBL071W-A   KTI11

YBL072C        RPS8A

YBR048W       RPS11B

YBR060C        ORC2

YBR117C        TKL2

YBR118W       TEF2

YBR179C        FZO1

YBR180W       DTR1

YBR181C        RPS6B

YCL024W       KCC4

YCL025C        AGP1

YCL030C        HIS4

YCL036W       GFD2

YCL037C        SRO9

YDL022W       GPD1

YDL060W       TSR1

YDL061C        RPS29B

YDL075W       RPL31A

YDL076C        RXT3

YDL082W       RPL13A

YDL083C        RPS16B

YDL130W       RPP1B

YDL133C-A   RPL41B

YDL133W

YDL136W       RPL35B

YDL184C        RPL41A

YDL186W

YDL188C        PPH22

YDL191W       RPL35A

YDL229W       SSB1

YDR036C

YDR037W      KRS1

YDR070C

YDR109C

YDR110W      FOB1

YDR249C

YDR251W      PAM1

YDR276C       PMP3

YDR300C       PRO1

YDR301W      CFT1

YDR393W      SHE9

YDR408C       ADE8

YDR409W      SIZ1

YDR418W      RPL12B

YDR447C       RPS17B

YDR448W      ADA2

YDR449C       UTP6

YDR450W      RPS18A

YDR470C       UGO1

YDR471W      RPL27B

YDR500C       RPL37B

YDR501W      PLM2

YEL007W

YEL009C        GCN4

YEL022W       GEA2

YEL023C

YEL054C        RPL12A

YER033C        ZRG8

YER034W

YER056C-A    RPL34A

YER074W       RPS24A

YER101C        AST2

YER102W       RPS8B

YER116C        SLX8

YER117W       RPL23B

YER168C        CCA1

YER169W       RPH1

YFL023W       BUD27

YFL024C        EPL1

YFR031C-A    RPL2A

YGL030W       RPL30

YGL031C        RPL24A

YGL073W       HSF1

YGL075C        MPS2

YGL083W       SCY1

YGL084C        GUP1

YGL103W       RPL28

YGL104C        VPS73

YGL115W       SNF4

YGL123W       RPS2

YGL124C        MON1

YGL147C        RPL9A

YGL189C        RPS26A

YGR027C       RPS25A

YGR033C

YGR034W      RPL26B

YGR085C       RPL11B

YGR117C

YGR118W      RPS23A

YGR192C       TDH3

YGR233C       PHO81

YGR234W      YHB1

YHL001W       RPL14B

YHL033C        RPL8A

YHL036W       MUP3

YHL038C        CBP2

YHR021C       RPS27B

YHR021W-A  ECM12

YHR033W

YHR122W

YHR141C       RPL42B

YHR142W      CHS7

YHR203C       RPS4B

YHR204W      MNL1

YIL018W        RPL2B

YIL053W        RHR2

YIL055C

YIL148W        RPL40A

YIL149C         MLP2

YJL049W

YJL089W        SIP4

YJL090C         DPB11

YJL134W        LCB3

YJL136C         RPS21B

YJL189W        RPL39

YJL190C         RPS22A

YJL191W        RPS14B

YJL192C

YJR058C         APS2

YJR059W        PTK2

YJR073C         OPI3

YJR074W        MOG1

YJR123W        RPS5

YJR139C         HOM6

YKL006C-A   SFT1

YKL006W      RPL14A

YKL015W      PUT3

YKL016C       ATP7

YKL081W      TEF4

YKL082C

YKL150W      MCR1

YKL151C

YKL156W      RPS27A

YKL178C       STE3

YKL180W      RPL17A

YKL182W      FAS1

YKR057W      RPS21A

YKR094C       RPL40B

YKR095W      MLP1

YLL039C        UBI4

YLR003C

YLR004C

YLR005W       SSL1

YLR023C

YLR044C        PDC1

YLR047C

YLR048W       RPS0B

YLR061W       RPL22A

YLR074C        BUD20

YLR075W       RPL10

YLR249W       YEF3

YLR286C        CTS1

YLR325C        RPL38

YLR326W

YLR333C        RPS25B

YLR387C

YLR388W       RPS29A

YLR390W-A   CCW14

YLR399C        BDF1

YLR406C        RPL31B

YLR407W

YLR413W

YLR437C

YLR438W       CAR2

YLR447C        VMA6

YLR448W       RPL6B

YLR452C        SST2

YML024W      RPS17A

YML025C

YML026C       RPS18B

YML073C       RPL6A

YMR013C       SEC59

YMR013W-A

YMR014W      BUD22

YMR026C       PEX12

YMR027W      HRT2

YMR092C       AIP1

YMR093W      UTP15

YMR116C       ASC1

YMR142C       RPL13B

YMR143W      RPS16A

YMR144W

YMR194W      RPL36A

YMR205C       PFK2

YMR206W

YMR229C       RRP5

YMR230W      RPS10B

YMR231W      PEP5

YMR243C       ZRC1

YMR244W

YNL010W

YNL011C

YNL069C       RPL16B

YNL101W

YNL154C       YCK2

YNL186W      UBP10

YNL216W      RAP1

YNL253W

YNL254C

YNL302C       RPS19B

YOL039W      RPP2A

YOL040C       RPS15

YOL059W      GPD2

YOL060C       MAM3

YOL109W

YOL121C       RPS19A

YOL127W      RPL25

YOL128C       YGK3

YOL136C       PFK27

YOR032C       HMS1

YOR043W      WHI2

YOR056C       NOB1

YOR057W      SGT1

YOR095C       RKI1

YOR096W      RPS7A

YOR113W      AZF1

YOR124C       UBP2

YOR292C

YOR293W      RPS10A

YOR312C       RPL20B

YOR338W

YOR340C       RPA43

YOR341W      RPA190

YOR365C

YOR367W      SCP1

YOR369C       RPS12

YPL075W       GCR1

YPL081W       RPS9A

YPL082C        MOT1

YPL090C        RPS6A

YPL131W       RPL5

YPL143W       RPL33A

YPL198W       RPL7B

YPL199C

YPL220W       RPL1A

YPR057W       BRR1

YPR080W       TEF1

YPR102C        RPL11A

YPR103W       PRE2

YPR105C        COG4

YPR106W       ISR1

YPR110C        RPC40

YPR111W       DBF20

YPR161C        SGV1

 

Genes Not Found:

 

SNR17B

SNR34

SNR38

SNR62

SNR72

SNR73

SNR74

SNR75

SNR76

SNR77

SNR78

TE%28UUC%29L

YBL071C-B

YGL188C-A

YGR027W-A

YGR027W-B

YLR264C-A

YLR406C-A

YLR412C-A

YMR230W-A

YOR032W-A

MIPS Functional Classification

Category          p-value In Category from Cluster          k          f

ribosome biogenesis      1e-14   RPL19B RPS8A RPS11B RPS6B RPS29B RPL31A RPL13A RPS16B RPP1B RPL41B RPL35B RPL41A RPL35A RPL12B RPS17B RPS18A RPL27B RPL37B RPL12A RPL34A RPS24A RPS8B RPL23B RPL2A RPL30 RPL24A RPL28 RPS2 RPL9A RPS26A RPS25A RPL26B RPL11B RPS23A RPL14B RPL8A RPS27B RPL42B RPS4B RPL2B RPL40A RPS21B RPL39 RPS22A RPS14B RPS5 RPL14A RPS27A RPL17A RPS21A RPL40B RPS0B RPL22A RPL10 RPL38 RPS25B RPS29A RPL31B RPL6B RPS17A YML025C RPS18B RPL6A ASC1 RPL13B RPS16A RPL36A RPS10B RPL16B RPS19B RPP2A RPS15 RPS19A RPL25 RPS7A RPS10A RPL20B RPS12 RPS9A RPS6A RPL5 RPL33A RPL7B RPL1A RPL11A 85        215

PROTEIN SYNTHESIS          1e-14   RPL19B RPS8A RPS11B TEF2 RPS6B RPS29B RPL31A RPL13A RPS16B RPP1B RPL41B RPL35B RPL41A RPL35A SSB1 KRS1 RPL12B RPS17B RPS18A RPL27B RPL37B RPL12A RPL34A RPS24A RPS8B RPL23B RPL2A RPL30 RPL24A RPL28 RPS2 RPL9A RPS26A RPS25A RPL26B RPL11B RPS23A RPL14B RPL8A RPS27B RPL42B RPS4B RPL2B RPL40A RPS21B RPL39 RPS22A RPS14B RPS5 RPL14A TEF4 RPS27A RPL17A RPS21A RPL40B UBI4 SSL1 RPS0B RPL22A RPL10 YEF3 RPL38 RPS25B RPS29A RPL31B RPL6B RPS17A YML025C RPS18B RPL6A ASC1 RPL13B RPS16A RPL36A RPS10B RPL16B RAP1 RPS19B RPP2A RPS15 RPS19A RPL25 RPS7A RPS10A RPL20B RPS12 RPS9A RPS6A RPL5 RPL33A RPL7B RPL1A TEF1 RPL11A         94        359

cytoplasm         1e-14   RPL19B RPS8A RPS11B TKL2 TEF2 RPS6B GPD1 RPS29B RPL31A RPL13A RPS16B RPP1B RPL41B RPL35B RPL41A RPL35A SSB1 KRS1 FOB1 PRO1 ADE8 RPL12B RPS17B RPS18A RPL27B RPL37B RPL12A RPL34A RPS24A RPS8B RPL23B CCA1 RPL30 RPL24A RPL28 RPS2 RPL9A RPS26A RPS25A RPL26B RPL11B RPS23A TDH3 YHB1 RPL14B RPL8A RPS27B RPL42B RPS4B RPL2B RPL40A RPS21B RPL39 RPS22A RPS14B RPS5 RPL14A TEF4 RPS27A RPL17A FAS1 RPS21A RPL40B UBI4 PDC1 RPS0B RPL10 YEF3 RPL38 RPS25B RPS29A RPL31B CAR2 RPL6B RPS17A RPS18B RPL6A ASC1 RPL13B RPS16A RPL36A PFK2 RPS10B RPL16B RPS19B RPP2A RPS15 RPS19A RPL25 RKI1 RPS7A UBP2 RPS10A RPL20B RPS12 RPS9A RPS6A RPL5 RPL33A RPL7B RPL1A TEF1 RPL11A          103      554

SUBCELLULAR LOCALISATION   1e-14   POP5 PIM1 RPL19B RPS8A RPS11B ORC2 TKL2 TEF2 FZO1 RPS6B KCC4 AGP1 GPD1 RPS29B RPL31A RPL13A RPS16B RPP1B RPL41B RPL35B RPL41A RPL35A SSB1 KRS1 FOB1 PRO1 CFT1 ADE8 RPL12B RPS17B ADA2 RPS18A RPL27B RPL37B GCN4 GEA2 RPL12A RPL34A RPS24A RPS8B RPL23B CCA1 RPL30 RPL24A HSF1 MPS2 RPL28 SNF4 RPS2 RPL9A RPS26A RPS25A RPL26B RPL11B RPS23A TDH3 YHB1 RPL14B RPL8A MUP3 CBP2 RPS27B RPL42B CHS7 RPS4B RPL2B RPL40A MLP2 SIP4 DPB11 RPS21B RPL39 RPS22A RPS14B APS2 OPI3 RPS5 SFT1 RPL14A PUT3 ATP7 TEF4 MCR1 RPS27A STE3 RPL17A FAS1 RPS21A RPL40B MLP1 UBI4 PDC1 RPS0B RPL10 YEF3 CTS1 RPL38 RPS25B RPS29A BDF1 RPL31B CAR2 VMA6 RPL6B SST2 RPS17A YML025C RPS18B RPL6A SEC59 PEX12 AIP1 ASC1 RPL13B RPS16A RPL36A PFK2 RRP5 RPS10B PEP5 ZRC1 RPL16B YCK2 RAP1 RPS19B RPP2A RPS15 GPD2 RPS19A RPL25 RKI1 RPS7A AZF1 UBP2 RPS10A RPL20B RPA43 RPA190 RPS12 GCR1 RPS9A MOT1 RPS6A RPL5 RPL33A RPL7B RPL1A BRR1 TEF1 RPL11A PRE2 RPC40            152      2256

 

 

 

MIPS Phenotypes

Category          p-value In Category from Cluster          k          f

 

 

 

MIPS Subcellular Localization

Category          p-value In Category from Cluster          k          f

cytoplasm         1e-14   RPL19B RPS8A RPS11B TKL2 TEF2 RPS6B SRO9 GPD1 RPS29B RPL31A RPL13A RPS16B RPP1B RPL41B RPL35B RPL41A RPL35A SSB1 KRS1 FOB1 PRO1 ADE8 RPL12B RPS17B RPS18A RPL27B RPL37B RPL12A RPL34A RPS24A RPS8B RPL23B CCA1 RPL30 RPL24A RPL28 RPS2 RPL9A RPS26A RPS25A RPL26B RPL11B RPS23A TDH3 YHB1 RPL14B RPL8A RPS27B RPL42B RPS4B RPL2B RPL40A RPS21B RPL39 RPS22A RPS14B RPS5 RPL14A TEF4 RPS27A RPL17A FAS1 RPS21A RPL40B UBI4 PDC1 RPS0B RPL22A RPL10 YEF3 RPL38 RPS25B RPS29A RPL31B CAR2 RPL6B RPS17A RPS18B RPL6A ASC1 RPL13B RPS16A RPL36A PFK2 RPS10B RPL16B RPS19B RPP2A RPS15 RPS19A RPL25 RKI1 RPS7A UBP2 RPS10A RPL20B RPS12 RPS9A RPS6A RPL5 RPL33A RPL7B RPL1A TEF1 RPL11A    105      593

 

 

 

MIPS Protein Complexes

Category          p-value In Category from Cluster          k          f

cytoplasmic ribosomal small subunit       1e-14   RPS8A RPS11B RPS6B RPS29B RPS16B RPS17B RPS18A RPS24A RPS8B RPS2 RPS26A RPS25A RPS23A RPS27B RPS4B RPS21B RPS22A RPS14B RPS5 RPS27A RPS21A RPS0B RPS25B RPS29A RPS17A RPS18B ASC1 RPS16A RPS10B RPS19B RPS15 RPS19A RPS7A RPS10A RPS12 RPS9A RPS6A            37        57

Cytoplasmic ribosomes 1e-14   RPL19B RPS8A RPS11B RPS6B RPS29B RPL31A RPL13A RPS16B RPP1B RPL41B RPL35B RPL41A RPL35A RPL12B RPS17B RPS18A RPL27B RPL37B RPL12A RPL34A RPS24A RPS8B RPL23B RPL2A RPL30 RPL24A RPL28 RPS2 RPL9A RPS26A RPS25A RPL26B RPL11B RPS23A RPL14B RPL8A RPS27B RPL42B RPS4B RPL2B RPL40A RPS21B RPL39 RPS22A RPS14B RPS5 RPL14A RPS27A RPL17A RPS21A RPL40B RPS0B RPL22A RPL10 RPL38 RPS25B RPS29A RPL31B RPL6B RPS17A RPS18B RPL6A ASC1 RPL13B RPS16A RPL36A RPS10B RPL16B RPS19B RPP2A RPS15 RPS19A RPL25 RPS7A RPS10A RPL20B RPS12 RPS9A RPS6A RPL5 RPL33A RPL7B RPL1A RPL11A    84        138

cytoplasmic ribosomal large subunit       1e-14   RPL19B RPL31A RPL13A RPP1B RPL41B RPL35B RPL41A RPL35A RPL12B RPL27B RPL37B RPL12A RPL34A RPL23B RPL2A RPL30 RPL24A RPL28 RPL9A RPL26B RPL11B RPL14B RPL8A RPL42B RPL2B RPL40A RPL39 RPL14A RPL17A RPL40B RPL22A RPL10 RPL38 RPL31B RPL6B RPL6A RPL13B RPL36A RPL16B RPP2A RPL25 RPL20B RPL5 RPL33A RPL7B RPL1A RPL11A        47            81

Translation complexes   1e-14   RPL19B RPS8A RPS11B TEF2 RPS6B RPS29B RPL31A RPL13A RPS16B RPP1B RPL41B RPL35B RPL41A RPL35A RPL12B RPS17B RPS18A RPL27B RPL37B RPL12A RPL34A RPS24A RPS8B RPL23B RPL2A RPL30 RPL24A RPL28 RPS2 RPL9A RPS26A RPS25A RPL26B RPL11B RPS23A RPL14B RPL8A RPS27B RPL42B RPS4B RPL2B RPL40A RPS21B RPL39 RPS22A RPS14B RPS5 RPL14A TEF4 RPS27A RPL17A RPS21A RPL40B RPS0B RPL22A RPL10 YEF3 RPL38 RPS25B RPS29A RPL31B RPL6B RPS17A RPS18B RPL6A ASC1 RPL13B RPS16A RPL36A RPS10B RPL16B RPS19B RPP2A RPS15 RPS19A RPL25 RPS7A RPS10A RPL20B RPS12 RPS9A RPS6A RPL5 RPL33A RPL7B RPL1A TEF1 RPL11A   88        240

 

 

 

MIPS Protein Classes

Category          p-value In Category from Cluster          k          f

 

 

 

GO Molecular Function

Category          p-value In Category from Cluster          k          f

structural constituent of ribosome [GO:0003735]          1e-14   RPL19B RPS8A RPS11B RPS6B RPS29B RPL31A RPL13A RPS16B RPP1B RPL41B RPL35B RPL41A RPL35A RPL12B RPS17B RPS18A RPL27B RPL37B RPL12A RPL34A RPS24A RPS8B RPL23B RPL2A RPL30 RPL24A RPL28 RPS2 RPL9A RPS26A RPS25A RPL26B RPL11B RPS23A RPL14B RPL8A RPS27B RPL42B RPS4B RPL2B RPL40A RPS21B RPL39 RPS22A RPS14B RPS5 RPL14A RPS27A RPL17A RPS21A RPL40B RPS0B RPL22A RPL10 RPL38 RPS25B RPS29A RPL31B RPL6B RPS17A YML025C RPS18B RPL6A RPL13B RPS16A RPL36A RPS10B RPL16B RPS19B RPP2A RPS15 RPS19A RPL25 RPS7A RPS10A RPL20B RPS12 RPS9A RPS6A RPL5 RPL33A RPL7B RPL1A RPL11A          84            206

structural molecule [GO:0005198]        1e-14   RPL19B RPS8A RPS11B RPS6B RPS29B RPL31A RPL13A RPS16B RPP1B RPL41B RPL35B RPL41A RPL35A RPL12B RPS17B RPS18A RPL27B RPL37B RPL12A RPL34A RPS24A RPS8B RPL23B RPL2A RPL30 RPL24A MPS2 RPL28 RPS2 RPL9A RPS26A RPS25A RPL26B RPL11B RPS23A RPL14B RPL8A RPS27B RPL42B RPS4B RPL2B RPL40A RPS21B RPL39 RPS22A RPS14B RPS5 RPL14A RPS27A RPL17A RPS21A RPL40B RPS0B RPL22A RPL10 RPL38 RPS25B RPS29A CCW14 RPL31B RPL6B RPS17A YML025C RPS18B RPL6A RPL13B RPS16A RPL36A RPS10B RPL16B RPS19B RPP2A RPS15 RPS19A RPL25 RPS7A RPS10A RPL20B RPS12 RPS9A RPS6A RPL5 RPL33A RPL7B RPL1A RPL11A             86        310

 

 

 

GO Biological Process

Category          p-value In Category from Cluster          k          f

protein biosynthesis [GO:0006412]       1e-14   RPL19B RPS8A RPS11B TEF2 RPS6B SRO9 RPS29B RPL31A RPL13A RPS16B RPP1B RPL41B RPL35B RPL41A PPH22 RPL35A SSB1 KRS1 RPL12B RPS17B RPS18A RPL27B RPL37B RPL12A RPL34A RPS24A RPS8B RPL23B CCA1 RPL2A RPL30 RPL24A RPL28 RPS2 RPL9A RPS26A RPS25A RPL26B RPL11B RPS23A RPL14B RPL8A RPS27B RPL42B RPS4B RPL2B RPL40A RPS21B RPL39 RPS22A RPS14B RPS5 RPL14A TEF4 RPS27A RPL17A RPS21A RPL40B RPS0B RPL22A RPL10 YEF3 RPL38 RPS25B RPS29A RPL31B RPL6B RPS17A YML025C RPS18B RPL6A SEC59 RPL13B RPS16A RPL36A RPS10B RPL16B RPS19B RPP2A RPS15 RPS19A RPL25 RPS7A RPS10A RPL20B RPS12 RPS9A RPS6A RPL5 RPL33A RPL7B RPL1A TEF1 RPL11A         94        415

biosynthesis [GO:0009058]      1e-14   RPL19B SKT5 RPS8A RPS11B TEF2 RPS6B HIS4 SRO9 RPS29B RPL31A RPL13A RPS16B RPP1B RPL41B RPL35B RPL41A PPH22 RPL35A SSB1 KRS1 PRO1 ADE8 RPL12B RPS17B RPS18A RPL27B RPL37B GCN4 RPL12A RPL34A RPS24A RPS8B RPL23B CCA1 RPL2A RPL30 RPL24A RPL28 RPS2 RPL9A RPS26A RPS25A RPL26B RPL11B RPS23A TDH3 RPL14B RPL8A RPS27B RPL42B CHS7 RPS4B RPL2B RHR2 RPL40A SIP4 LCB3 RPS21B RPL39 RPS22A RPS14B OPI3 RPS5 RPL14A TEF4 MCR1 RPS27A RPL17A FAS1 RPS21A RPL40B RPS0B RPL22A RPL10 YEF3 RPL38 RPS25B RPS29A RPL31B RPL6B RPS17A YML025C RPS18B RPL6A SEC59 RPL13B RPS16A RPL36A RPS10B RPL16B RPS19B RPP2A RPS15 RPS19A RPL25 RPS7A RPS10A RPL20B RPS12 RPS9A RPS6A RPL5 RPL33A RPL7B RPL1A TEF1 RPL11A             107      731

protein metabolism [GO:0019538]        1e-14   PIM1 RPL19B AST1 RPS8A RPS11B TEF2 RPS6B KCC4 SRO9 RPS29B RPL31A RPL13A RPS16B RPP1B RPL41B RPL35B RPL41A PPH22 RPL35A SSB1 KRS1 SIZ1 RPL12B RPS17B ADA2 RPS18A RPL27B RPL37B GEA2 RPL12A RPL34A RPS24A RPS8B RPL23B CCA1 EPL1 RPL2A RPL30 RPL24A RPL28 VPS73 RPS2 MON1 RPL9A RPS26A RPS25A RPL26B RPL11B RPS23A RPL14B RPL8A RPS27B RPL42B CHS7 RPS4B MNL1 RPL2B RPL40A MLP2 RPS21B RPL39 RPS22A RPS14B MOG1 RPS5 SFT1 RPL14A TEF4 RPS27A RPL17A RPS21A RPL40B MLP1 UBI4 RPS0B RPL22A RPL10 YEF3 RPL38 RPS25B RPS29A RPL31B RPL6B RPS17A YML025C RPS18B RPL6A SEC59 RPL13B RPS16A RPL36A RPS10B PEP5 RPL16B YCK2 UBP10 RPS19B RPP2A RPS15 RPS19A RPL25 YGK3 NOB1 RPS7A UBP2 RPS10A RPL20B RPS12 RPS9A RPS6A RPL5 RPL33A RPL7B RPL1A TEF1 RPL11A PRE2 COG4 DBF20 SGV1          120            1168

metabolism [GO:0008152]       1e-14   POP5 PIM1 RPL19B SKT5 AST1 RPS8A RPS11B ORC2 TKL2 TEF2 RPS6B KCC4 HIS4 SRO9 RPS29B RPL31A RPL13A RPS16B RPP1B RPL41B RPL35B RPL41A PPH22 RPL35A SSB1 KRS1 FOB1 PRO1 CFT1 ADE8 SIZ1 RPL12B RPS17B ADA2 UTP6 RPS18A RPL27B RPL37B GCN4 GEA2 RPL12A RPL34A RPS24A RPS8B SLX8 RPL23B CCA1 RPH1 EPL1 RPL2A RPL30 RPL24A GUP1 RPL28 VPS73 SNF4 RPS2 MON1 RPL9A RPS26A RPS25A RPL26B RPL11B RPS23A TDH3 PHO81 RPL14B RPL8A CBP2 RPS27B RPL42B CHS7 RPS4B MNL1 RPL2B RHR2 RPL40A MLP2 SIP4 DPB11 LCB3 RPS21B RPL39 RPS22A RPS14B OPI3 MOG1 RPS5 HOM6 SFT1 RPL14A PUT3 TEF4 MCR1 RPS27A RPL17A FAS1 RPS21A RPL40B MLP1 UBI4 SSL1 PDC1 RPS0B RPL22A RPL10 YEF3 RPL38 RPS25B RPS29A RPL31B CAR2 RPL6B RPS17A YML025C RPS18B RPL6A SEC59 UTP15 RPL13B RPS16A RPL36A PFK2 RRP5 RPS10B PEP5 ZRC1 RPL16B YCK2 UBP10 RAP1 RPS19B RPP2A RPS15 GPD2 RPS19A RPL25 YGK3 PFK27 NOB1 RKI1 RPS7A AZF1 UBP2 RPS10A RPL20B RPA43 RPA190 RPS12 GCR1 RPS9A MOT1 RPS6A RPL5 RPL33A RPL7B RPL1A BRR1 TEF1 RPL11A PRE2 COG4 RPC40 DBF20 SGV1   165      2693

macromolecule biosynthesis [GO:0009059]      1.31006e-14    RPL19B SKT5 RPS8A RPS11B TEF2 RPS6B SRO9 RPS29B RPL31A RPL13A RPS16B RPP1B RPL41B RPL35B RPL41A PPH22 RPL35A SSB1 KRS1 RPL12B RPS17B RPS18A RPL27B RPL37B RPL12A RPL34A RPS24A RPS8B RPL23B CCA1 RPL2A RPL30 RPL24A RPL28 RPS2 RPL9A RPS26A RPS25A RPL26B RPL11B RPS23A RPL14B RPL8A RPS27B RPL42B CHS7 RPS4B RPL2B RPL40A RPS21B RPL39 RPS22A RPS14B RPS5 RPL14A TEF4 RPS27A RPL17A RPS21A RPL40B RPS0B RPL22A RPL10 YEF3 RPL38 RPS25B RPS29A RPL31B RPL6B RPS17A YML025C RPS18B RPL6A SEC59 RPL13B RPS16A RPL36A RPS10B RPL16B RPS19B RPP2A RPS15 RPS19A RPL25 RPS7A RPS10A RPL20B RPS12 RPS9A RPS6A RPL5 RPL33A RPL7B RPL1A TEF1 RPL11A       96        422

cell growth and/or maintenance [GO:0008151] 7.60447e-12    POP5 PIM1 RPL19B SKT5 AST1 KTI11 RPS8A RPS11B ORC2 TKL2 TEF2 FZO1 RPS6B KCC4 AGP1 HIS4 SRO9 GPD1 TSR1 RPS29B RPL31A RPL13A RPS16B RPP1B RPL41B RPL35B RPL41A PPH22 RPL35A SSB1 YDR036C KRS1 FOB1 PAM1 PMP3 PRO1 CFT1 SHE9 ADE8 SIZ1 RPL12B RPS17B ADA2 UTP6 RPS18A UGO1 RPL27B RPL37B GCN4 GEA2 RPL12A RPL34A RPS24A RPS8B SLX8 RPL23B CCA1 RPH1 BUD27 EPL1 RPL2A RPL30 RPL24A HSF1 MPS2 GUP1 RPL28 VPS73 SNF4 RPS2 MON1 RPL9A RPS26A RPS25A RPL26B RPL11B RPS23A TDH3 PHO81 YHB1 RPL14B RPL8A MUP3 CBP2 RPS27B ECM12 RPL42B CHS7 RPS4B MNL1 RPL2B RHR2 RPL40A MLP2 SIP4 DPB11 LCB3 RPS21B RPL39 RPS22A RPS14B APS2 PTK2 OPI3 MOG1 RPS5 HOM6 SFT1 RPL14A PUT3 ATP7 TEF4 MCR1 RPS27A STE3 RPL17A FAS1 RPS21A RPL40B MLP1 UBI4 SSL1 PDC1 RPS0B RPL22A BUD20 RPL10 YEF3 CTS1 RPL38 RPS25B RPS29A CCW14 BDF1 RPL31B CAR2 VMA6 RPL6B SST2 RPS17A YML025C RPS18B RPL6A SEC59 BUD22 PEX12 AIP1 UTP15 RPL13B RPS16A RPL36A PFK2 RRP5 RPS10B PEP5 ZRC1 RPL16B YCK2 UBP10 RAP1 RPS19B RPP2A RPS15 GPD2 MAM3 RPS19A RPL25 YGK3 PFK27 HMS1 WHI2 NOB1 SGT1 RKI1 RPS7A AZF1 UBP2 RPS10A RPL20B RPA43 RPA190 RPS12 GCR1 RPS9A MOT1 RPS6A RPL5 RPL33A RPL7B RPL1A BRR1 TEF1 RPL11A PRE2 COG4 RPC40 DBF20 SGV1 198            3657

ribosomal subunit assembly [GO:0042257]       2.70596e-10    RPS11B RPL12B RPS17B RPL12A RPL11B RPS14B RPS0B RPL10 RPL6B RPS17A YML025C RPL6A RPL25 RPL5 RPL11A 15        48

ribosome assembly [GO:0042255]       5.18059e-10    RPS11B RPL12B RPS17B RPL12A RPL11B RPS14B RPS0B RPL10 RPL6B RPS17A YML025C RPL6A RPL25 RPL5 RPL11A 15        50

ribosomal large subunit assembly and maintenance [GO:0000027]         7.24245e-07    RPL12B RPL12A RPL11B RPL10 RPL6B YML025C RPL6A RPL25 RPL5 RPL11A     10        35

ribosome biogenesis and assembly [GO:0042254]        2.42644e-06    POP5 RPS11B TSR1 RPL12B RPS17B UTP6 RPL12A RPL30 RPL11B RPS14B RPS0B RPL10 RPL6B RPS17A YML025C RPL6A UTP15 RRP5 RPL25 RPL5 RPL11A          21        165

translational elongation [GO:0006414]  1.15054e-05    TEF2 RPP1B CCA1 TEF4 YEF3 RPP2A TEF1         7          21

 

 

 

GO Cellular Component

Category          p-value In Category from Cluster          k          f

eukaryotic 48S initiation complex [GO:0016283]          1e-14   RPS8A RPS11B RPS6B RPS29B RPS16B RPS17B RPS18A RPS24A RPS8B RPS2 RPS26A RPS25A RPS23A RPS27B RPS4B RPS21B RPS22A RPS14B RPS5 RPS27A RPS21A RPS0B RPS25B RPS29A RPS17A RPS18B RPS16A RPS10B RPS19B RPS15 RPS19A RPS7A RPS10A RPS12 RPS9A RPS6A         36        61

cytosolic small ribosomal subunit (sensu Eukarya) [GO:0005843]          1e-14   RPS8A RPS11B RPS6B RPS29B RPS16B RPS17B RPS18A RPS24A RPS8B RPS2 RPS26A RPS25A RPS23A RPS27B RPS4B RPS21B RPS22A RPS14B RPS5 RPS27A RPS21A RPS0B RPS25B RPS29A RPS17A RPS18B RPS16A RPS10B RPS19B RPS15 RPS19A RPS7A RPS10A RPS12 RPS9A RPS6A     36        61

cytosolic large ribosomal subunit (sensu Eukarya) [GO:0005842]          1e-14   RPL19B RPL31A RPL13A RPP1B RPL41B RPL35B RPL41A RPL35A RPL12B RPL27B RPL37B RPL12A RPL34A RPL23B RPL2A RPL30 RPL24A RPL28 RPL9A RPL26B RPL11B RPL14B RPL8A RPL42B RPL2B RPL40A RPL39 RPL14A RPL17A RPL40B RPL22A RPL10 RPL38 RPL31B RPL6B RPL6A RPL13B RPL36A RPL16B RPP2A RPL25 RPL20B RPL5 RPL33A RPL7B RPL1A RPL11A         47        83

cytosolic ribosome (sensu Eukarya) [GO:0005830]       1e-14   RPL19B RPS8A RPS11B RPS6B RPS29B RPL31A RPL13A RPS16B RPP1B RPL41B RPL35B RPL41A RPL35A RPL12B RPS17B RPS18A RPL27B RPL37B RPL12A RPL34A RPS24A RPS8B RPL23B RPL2A RPL30 RPL24A RPL28 RPS2 RPL9A RPS26A RPS25A RPL26B RPL11B RPS23A RPL14B RPL8A RPS27B RPL42B RPS4B RPL2B RPL40A RPS21B RPL39 RPS22A RPS14B RPS5 RPL14A RPS27A RPL17A RPS21A RPL40B RPS0B RPL22A RPL10 RPL38 RPS25B RPS29A RPL31B RPL6B RPS17A RPS18B RPL6A RPL13B RPS16A RPL36A RPS10B RPL16B RPS19B RPP2A RPS15 RPS19A RPL25 RPS7A RPS10A RPL20B RPS12 RPS9A RPS6A RPL5 RPL33A RPL7B RPL1A RPL11A             83        151

eukaryotic 43S pre-initiation complex [GO:0016282]    1e-14   RPS8A RPS11B RPS6B RPS29B RPS16B RPS17B RPS18A RPS24A RPS8B RPS2 RPS26A RPS25A RPS23A RPS27B RPS4B RPS21B RPS22A RPS14B RPS5 RPS27A RPS21A RPS0B RPS25B RPS29A RPS17A RPS18B RPS16A RPS10B RPS19B RPS15 RPS19A RPS7A RPS10A RPS12 RPS9A RPS6A         36        67

small ribosomal subunit [GO:0015935] 1e-14   RPS8A RPS11B RPS6B RPS29B RPS16B RPS17B RPS18A RPS24A RPS8B RPS2 RPS26A RPS25A RPS23A RPS27B RPS4B RPS21B RPS22A RPS14B RPS5 RPS27A RPS21A RPS0B RPS25B RPS29A RPS17A RPS18B RPS16A RPS10B RPS19B RPS15 RPS19A RPS7A RPS10A RPS12 RPS9A RPS6A            36        88

large ribosomal subunit [GO:0015934]  1e-14   RPL19B RPL31A RPL13A RPP1B RPL41B RPL35B RPL41A RPL35A RPL12B RPL27B RPL37B RPL12A RPL34A RPL23B RPL2A RPL30 RPL24A RPL28 RPL9A RPL26B RPL11B RPL14B RPL8A RPL42B RPL2B RPL40A RPL39 RPL14A RPL17A RPL40B RPL22A RPL10 RPL38 RPL31B RPL6B YML025C RPL6A RPL13B RPL36A RPL16B RPP2A RPL25 RPL20B RPL5 RPL33A RPL7B RPL1A RPL11A          48        122

ribosome [GO:0005840]          1e-14   RPL19B RPS8A RPS11B TEF2 RPS6B SRO9 RPS29B RPL31A RPL13A RPS16B RPP1B RPL41B RPL35B RPL41A RPL35A SSB1 RPL12B RPS17B RPS18A RPL27B RPL37B RPL12A RPL34A RPS24A RPS8B RPL23B RPL2A RPL30 RPL24A RPL28 RPS2 RPL9A RPS26A RPS25A RPL26B RPL11B RPS23A RPL14B RPL8A RPS27B RPL42B RPS4B RPL2B RPL40A RPS21B RPL39 RPS22A RPS14B RPS5 RPL14A TEF4 RPS27A RPL17A RPS21A RPL40B RPS0B RPL22A RPL10 YEF3 RPL38 RPS25B RPS29A RPL31B RPL6B RPS17A YML025C RPS18B RPL6A RPL13B RPS16A RPL36A RPS10B RPL16B RPS19B RPP2A RPS15 RPS19A RPL25 RPS7A RPS10A RPL20B RPS12 RPS9A RPS6A RPL5 RPL33A RPL7B RPL1A TEF1 RPL11A          90        258

cytosol [GO:0005829] 1e-14   RPL19B RPS8A RPS11B RPS6B RPS29B RPL31A RPL13A RPS16B RPP1B RPL41B RPL35B RPL41A RPL35A RPL12B RPS17B RPS18A RPL27B RPL37B RPL12A RPL34A RPS24A RPS8B RPL23B RPL2A RPL30 RPL24A RPL28 RPS2 RPL9A RPS26A RPS25A RPL26B RPL11B RPS23A TDH3 RPL14B RPL8A RPS27B RPL42B RPS4B RPL2B RPL40A RPS21B RPL39 RPS22A RPS14B RPS5 RPL14A RPS27A RPL17A FAS1 RPS21A RPL40B RPS0B RPL22A RPL10 RPL38 RPS25B RPS29A RPL31B RPL6B RPS17A RPS18B RPL6A RPL13B RPS16A RPL36A PFK2 RPS10B RPL16B RPS19B RPP2A RPS15 GPD2 RPS19A RPL25 NOB1 RPS7A RPS10A RPL20B RPS12 RPS9A RPS6A RPL5 RPL33A RPL7B RPL1A RPL11A PRE2   89        310

ribonucleoprotein complex [GO:0030529]        1e-14   POP5 RPL19B RPS8A RPS11B TEF2 RPS6B SRO9 RPS29B RPL31A RPL13A RPS16B RPP1B RPL41B RPL35B RPL41A RPL35A SSB1 RPL12B RPS17B UTP6 RPS18A RPL27B RPL37B RPL12A RPL34A RPS24A RPS8B RPL23B RPL2A RPL30 RPL24A RPL28 RPS2 RPL9A RPS26A RPS25A RPL26B RPL11B RPS23A RPL14B RPL8A RPS27B RPL42B RPS4B RPL2B RPL40A RPS21B RPL39 RPS22A RPS14B RPS5 RPL14A TEF4 RPS27A RPL17A RPS21A RPL40B RPS0B RPL22A RPL10 YEF3 RPL38 RPS25B RPS29A RPL31B RPL6B RPS17A YML025C RPS18B RPL6A UTP15 RPL13B RPS16A RPL36A RRP5 RPS10B RPL16B RPS19B RPP2A RPS15 RPS19A RPL25 RPS7A RPS10A RPL20B RPS12 RPS9A RPS6A RPL5 RPL33A RPL7B RPL1A BRR1 TEF1 RPL11A            95        380

cytoplasm [GO:0005737]         1e-14   PIM1 RPL19B SKT5 RPS8A RPS11B TEF2 FZO1 RPS6B SRO9 GPD1 RPS29B RPL31A RPL13A RPS16B RPP1B RPL41B RPL35B RPL41A RPL35A SSB1 KRS1 SHE9 RPL12B RPS17B RPS18A UGO1 RPL27B RPL37B GEA2 RPL12A RPL34A RPS24A AST2 RPS8B RPL23B CCA1 RPL2A RPL30 RPL24A MPS2 RPL28 SNF4 RPS2 RPL9A RPS26A RPS25A RPL26B RPL11B RPS23A TDH3 RPL14B RPL8A CBP2 RPS27B YHR033W RPL42B CHS7 RPS4B MNL1 RPL2B RPL40A LCB3 RPS21B RPL39 RPS22A RPS14B APS2 OPI3 RPS5 SFT1 RPL14A ATP7 TEF4 MCR1 RPS27A RPL17A FAS1 RPS21A RPL40B UBI4 RPS0B RPL22A RPL10 YEF3 CTS1 RPL38 RPS25B RPS29A RPL31B YLR437C CAR2 VMA6 RPL6B RPS17A YML025C RPS18B RPL6A PEX12 AIP1 ASC1 RPL13B RPS16A RPL36A PFK2 RPS10B PEP5 ZRC1 RPL16B RPS19B RPP2A RPS15 GPD2 RPS19A RPL25 PFK27 NOB1 RPS7A UBP2 RPS10A RPL20B RPS12 RPS9A RPS6A RPL5 RPL33A RPL7B RPL1A TEF1 RPL11A PRE2 COG4            131      1810

intracellular [GO:0005622]       4.05675e-13    POP5 PIM1 RPL19B SKT5 RPS8A RPS11B ORC2 TEF2 FZO1 RPS6B AGP1 SRO9 GPD1 TSR1 RPS29B RPL31A RPL13A RPS16B RPP1B RPL41B RPL35B RPL41A RPL35A SSB1 KRS1 FOB1 PMP3 CFT1 SHE9 SIZ1 RPL12B RPS17B ADA2 UTP6 RPS18A UGO1 RPL27B RPL37B GCN4 GEA2 RPL12A RPL34A RPS24A AST2 RPS8B SLX8 RPL23B CCA1 RPH1 EPL1 RPL2A RPL30 RPL24A HSF1 MPS2 RPL28 SNF4 RPS2 RPL9A RPS26A RPS25A RPL26B RPL11B RPS23A TDH3 RPL14B RPL8A CBP2 RPS27B YHR033W RPL42B CHS7 RPS4B MNL1 RPL2B RPL40A MLP2 SIP4 DPB11 LCB3 RPS21B RPL39 RPS22A RPS14B APS2 OPI3 MOG1 RPS5 SFT1 RPL14A PUT3 ATP7 TEF4 MCR1 RPS27A STE3 RPL17A FAS1 RPS21A RPL40B MLP1 UBI4 SSL1 RPS0B RPL22A BUD20 RPL10 YEF3 CTS1 RPL38 RPS25B RPS29A BDF1 RPL31B YLR437C CAR2 VMA6 RPL6B SST2 RPS17A YML025C RPS18B RPL6A BUD22 PEX12 AIP1 UTP15 ASC1 RPL13B RPS16A YMR144W RPL36A PFK2 RRP5 RPS10B PEP5 ZRC1 RPL16B YCK2 UBP10 RAP1 RPS19B RPP2A RPS15 GPD2 RPS19A RPL25 PFK27 NOB1 SGT1 RPS7A AZF1 UBP2 RPS10A RPL20B RPA43 RPA190 RPS12 GCR1 RPS9A MOT1 RPS6A RPL5 RPL33A RPL7B RPL1A BRR1 TEF1 RPL11A PRE2 COG4 RPC40 SGV1    173      2921

cell [GO:0005623]       2.00762e-12    POP5 PIM1 RPL19B SKT5 AST1 RPS8A RPS11B ORC2 TEF2 FZO1 RPS6B KCC4 AGP1 HIS4 SRO9 GPD1 TSR1 RPS29B RPL31A RPL13A RPS16B RPP1B RPL41B RPL35B RPL41A RPL35A SSB1 KRS1 FOB1 PMP3 CFT1 SHE9 SIZ1 RPL12B RPS17B ADA2 UTP6 RPS18A UGO1 RPL27B RPL37B GCN4 GEA2 RPL12A RPL34A RPS24A AST2 RPS8B SLX8 RPL23B CCA1 RPH1 EPL1 RPL2A RPL30 RPL24A HSF1 MPS2 GUP1 RPL28 SNF4 RPS2 RPL9A RPS26A RPS25A RPL26B RPL11B RPS23A TDH3 RPL14B RPL8A MUP3 CBP2 RPS27B YHR033W RPL42B CHS7 RPS4B MNL1 RPL2B RPL40A MLP2 SIP4 DPB11 LCB3 RPS21B RPL39 RPS22A RPS14B APS2 OPI3 MOG1 RPS5 SFT1 RPL14A PUT3 ATP7 TEF4 MCR1 RPS27A STE3 RPL17A FAS1 RPS21A RPL40B MLP1 UBI4 SSL1 RPS0B RPL22A BUD20 RPL10 YEF3 CTS1 RPL38 RPS25B RPS29A BDF1 RPL31B YLR437C CAR2 VMA6 RPL6B SST2 RPS17A YML025C RPS18B RPL6A SEC59 BUD22 PEX12 AIP1 UTP15 ASC1 RPL13B RPS16A YMR144W RPL36A PFK2 RRP5 RPS10B PEP5 ZRC1 RPL16B YCK2 UBP10 RAP1 RPS19B RPP2A RPS15 GPD2 RPS19A RPL25 PFK27 NOB1 SGT1 RPS7A AZF1 UBP2 RPS10A RPL20B RPA43 RPA190 RPS12 GCR1 RPS9A MOT1 RPS6A RPL5 RPL33A RPL7B RPL1A BRR1 TEF1 RPL11A PRE2 COG4 RPC40 SGV1     179      3106

 

 

 

SMART Domains

Category          p-value In Category from Cluster          k          f

 

 

 

PFam-A Domains

Category          p-value In Category from Cluster          k          f

 

 

 

Yeast Two Hybrid - Uetz

Category          p-value In Category from Cluster          k          f

 

 

 

Yeast Two Hybrid - Ito (core)

Category          p-value In Category from Cluster          k          f

 

 

 

Yeast Two Hybrid - Ito (full)

Category          p-value In Category from Cluster          k          f

 

 

 

Synthetic Genetic Array Analysis

Category          p-value In Category from Cluster          k          f

 

 

 

MDS Proteomics Complexes

Category          p-value In Category from Cluster          k          f

 

 

 

Cellzome Complexes

Category          p-value In Category from Cluster          k          f

YBR031W (RPL4A)   5.13589e-13    RPL13A RPL12B RPL27B RPL28 RPL11B RPL2B RPS14B RPL17A RPL10 RPL6A RPL13B RPL16B RPL25 RPL20B RPL33A RPL7B 16        39

 

 

 

Proteome Localization--Observed

Category          p-value In Category from Cluster          k          f

cyto      0.00115251     FUN19 RPL19B RPS8A TEF2 RPS6B AGP1 HIS4 GPD1 RPL31A RPL13A RPL41A PPH22 SSB1 KRS1 PRO1 RPS17B RPS18A YEL007W GEA2 ZRG8 YER034W AST2 RPL23B BUD27 RPL24A SNF4 RPS2 RPL9A RPS26A RPL26B RPL11B YGR117C RPS23A TDH3 RPL8A YHR033W RHR2 YJL049W RPS22A RPS5 HOM6 SFT1 RPL14A YKL151C RPS27A RPL17A FAS1 UBI4 PDC1 RPL22A RPL10 YEF3 YLR437C CAR2 PEX12 ASC1 RPS16A PFK2 YNL010W YNL011C RPL16B RPS15 MAM3 YOL109W RPL25 YGK3 PFK27 WHI2 RPS9A RPL5 RPL7B YPL199C TEF1 RPL11A         74        1324

 

 

 

Proteome Localization--Predicted+Observed

Category          p-value In Category from Cluster          k          f

cyt        2.25708e-07    FUN19 RPL19B YBL049W YBL060W SKT5 AST1 RPS8A RPS11B TKL2 TEF2 FZO1 DTR1 RPS6B AGP1 HIS4 SRO9 GPD1 TSR1 RPS29B RPL31A RXT3 RPL13A RPS16B RPP1B YDL133W RPL35B RPL41A YDL186W PPH22 RPL35A SSB1 KRS1 YDR070C YDR109C FOB1 PMP3 PRO1 ADE8 RPL12B RPS17B UTP6 RPS18A UGO1 RPL27B RPL37B YEL007W GEA2 YEL023C RPL12A ZRG8 YER034W RPS24A AST2 RPS8B SLX8 RPL23B BUD27 RPL30 RPL24A RPL28 RPS2 MON1 RPL9A RPS26A RPS25A YGR033C RPL26B RPL11B YGR117C RPS23A TDH3 PHO81 YHB1 RPL14B RPL8A RPS27B YHR033W YHR122W RPL42B CHS7 RPS4B MNL1 RPL2B RHR2 YIL055C RPL40A YJL049W SIP4 RPS21B RPL39 RPS22A RPS14B RPS5 HOM6 RPL14A ATP7 TEF4 YKL082C YKL151C RPS27A RPL17A FAS1 RPS21A RPL40B UBI4 YLR003C YLR004C PDC1 RPS0B RPL22A RPL10 YEF3 RPL38 RPS25B YLR387C RPS29A RPL31B YLR437C CAR2 VMA6 RPL6B RPS17A RPS18B RPL6A PEX12 HRT2 ASC1 RPL13B RPS16A RPL36A PFK2 YMR206W RPS10B PEP5 YNL010W YNL011C RPL16B YNL101W YCK2 RPS19B RPP2A RPS15 YOL109W RPS19A RPL25 YGK3 PFK27 WHI2 SGT1 RKI1 RPS7A UBP2 YOR292C RPS10A RPL20B SCP1 RPS12 RPS9A RPS6A RPL5 RPL33A RPL7B YPL199C RPL1A TEF1 RPL11A PRE2 COG4 DBF20      169            3210

 

 

 

Deletions Consortium (Essentiality, Morphology)

Category          p-value In Category from Cluster          k          f

 

 

 

Yeast Fitness Data

Category          p-value In Category from Cluster          k          f

Slow Growers  5.09951e-05    RPL19B RPS11B FZO1 RPS6B RPS29B RPL31A RPL35A PMP3 PRO1 RPL12B RPS18A RPL34A RPS24A SLX8 RPL23B BUD27 GUP1 SNF4 RPS23A RPS27B RPS4B RPS21B RPL39 RPL14A ATP7 PDC1 YLR047C RPL22A BUD20 BDF1 VMA6 RPL6B RPS17A RPL6A BUD22 ASC1 RPL13B RPS16A PFK2 RPL16B RPS19B RPS19A RPS7A RPS10A RPS6A   45        617

 

 

 

Published Complexes

Category          p-value In Category from Cluster          k          f

Andersen et al. (2002) - Curr Bio 12:1-            3.3882e-08      RPS6B RPL31A RPL12B RPL27B RPS8B RPL28 RPL26B RPL11B RPL14B RPL2B RPS5 RPL17A UBI4 RPL22A RPL6B RPS18B RPL13B RPS16A RRP5 RPL25 RPA190 RPS12 RPL5 RPC40            24        165

Harnicharnpai et al. (2001) - Mol Cell 8:505-   0.000339205   SSB1 RPS2 TDH3 RPS22A RPL10 RPS15 RPL5      7            34


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Rap1-PBM-exact.FunSpec.txt

 Input Cluster (n=23)

YBL049W

YBR188C        NTC20

YBR189W       RPS9B

YCL030C        HIS4

YDL136W       RPL35B

YDR500C       RPL37B

YDR501W      PLM2

YER047C        SAP1

YGL030W       RPL30

YGL031C        RPL24A

YJR073C         OPI3

YJR074W        MOG1

YKR057W      RPS21A

YMR013W-A

YMR014W      BUD22

YMR116C       ASC1

YNL216W      RAP1

YOL059W      GPD2

YOL060C       MAM3

YOR032C       HMS1

YOR124C       UBP2

YOR338W

YPR080W       TEF1

 

Genes Not Found:

 

SNR72

SNR73

SNR74

SNR75

YOR032W-A

MIPS Functional Classification

Category          p-value In Category from Cluster          k          f

PROTEIN SYNTHESIS          2.39924e-06    RPS9B RPL35B RPL37B RPL30 RPL24A RPS21A ASC1 RAP1 TEF1             9          359

ribosome biogenesis      7.78433e-06    RPS9B RPL35B RPL37B RPL30 RPL24A RPS21A ASC1   7          215

cytoplasm         8.14317e-05    RPS9B RPL35B RPL37B RPL30 RPL24A RPS21A ASC1 UBP2 TEF1       9          554

 

 

 

MIPS Phenotypes

Category          p-value In Category from Cluster          k          f

 

 

 

MIPS Subcellular Localization

Category          p-value In Category from Cluster          k          f

cytoplasm         0.000138653   RPS9B RPL35B RPL37B RPL30 RPL24A RPS21A ASC1 UBP2 TEF1       9          593

 

 

 

MIPS Protein Complexes

Category          p-value In Category from Cluster          k          f

Cytoplasmic ribosomes 3.93754e-07    RPS9B RPL35B RPL37B RPL30 RPL24A RPS21A ASC1   7          138

Translation complexes   1.22639e-06    RPS9B RPL35B RPL37B RPL30 RPL24A RPS21A ASC1 TEF1      8          240

 

 

 

MIPS Protein Classes

Category          p-value In Category from Cluster          k          f

 

 

 

GO Molecular Function

Category          p-value In Category from Cluster          k          f

 

 

 

GO Biological Process

Category          p-value In Category from Cluster          k          f

 

 

 

GO Cellular Component

Category          p-value In Category from Cluster          k          f

cytosolic ribosome (sensu Eukarya) [GO:0005830]       1.27432e-05    RPS9B RPL35B RPL37B RPL30 RPL24A RPS21A          6          151

ribosome [GO:0005840]          2.5696e-05      RPS9B RPL35B RPL37B RPL30 RPL24A RPS21A TEF1    7          258

ribonucleoprotein complex [GO:0030529]        3.71444e-05    NTC20 RPS9B RPL35B RPL37B RPL30 RPL24A RPS21A TEF1             8          380

cytosol [GO:0005829] 8.35672e-05    RPS9B RPL35B RPL37B RPL30 RPL24A RPS21A GPD2   7          310

 

 

 

SMART Domains

Category          p-value In Category from Cluster          k          f

 

 

 

PFam-A Domains

Category          p-value In Category from Cluster          k          f

 

 

 

Yeast Two Hybrid - Uetz

Category          p-value In Category from Cluster          k          f

 

 

 

Yeast Two Hybrid - Ito (core)

Category          p-value In Category from Cluster          k          f

 

 

 

Yeast Two Hybrid - Ito (full)

Category          p-value In Category from Cluster          k          f

 

 

 

Synthetic Genetic Array Analysis

Category          p-value In Category from Cluster          k          f

 

 

 

MDS Proteomics Complexes

Category          p-value In Category from Cluster          k          f

 

 

 

Cellzome Complexes

Category          p-value In Category from Cluster          k          f

 

 

 

Proteome Localization--Observed

Category          p-value In Category from Cluster          k          f

 

 

 

Proteome Localization--Predicted+Observed

Category          p-value In Category from Cluster          k          f

 

 

 

Deletions Consortium (Essentiality, Morphology)

Category          p-value In Category from Cluster          k          f

 

 

 

Yeast Fitness Data

Category          p-value In Category from Cluster          k          f

 

 

 

Published Complexes

Category          p-value In Category from Cluster          k          f


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Rap1-LeeChIP-alldata.FunSpec.txt

 Input Cluster (n=161)

YAL033W       POP5

YAL034C        FUN19

YBL022C        PIM1

YBL087C        RPL23A

YBR084C-A   RPL19A

YBR085W       AAC3

YBR181C        RPS6B

YBR188C        NTC20

YBR189W       RPS9B

YBR191W       RPL21A

YCR024C-A   PMP1

YDL075W       RPL31A

YDL076C        RXT3

YDL082W       RPL13A

YDL083C        RPS16B

YDL133C-A   RPL41B

YDL133W

YDL136W       RPL35B

YDL184C        RPL41A

YDL186W

YDL188C        PPH22

YDL191W       RPL35A

YDR025W      RPS11A

YDR064W      RPS13

YDR100W

YDR186C

YDR188W      CCT6

YDR312W      SSF2

YDR418W      RPL12B

YDR449C       UTP6

YDR450W      RPS18A

YDR470C       UGO1

YDR471W      RPL27B

YDR500C       RPL37B

YDR501W      PLM2

YEL022W       GEA2

YEL023C

YEL054C        RPL12A

YEL075C

YER031C        YPT31

YER032W       FIR1

YER074W       RPS24A

YER116C        SLX8

YER117W       RPL23B

YFL021W       GAT1

YFL022C        FRS2

YFL034C-A    RPL22B

YFL034W

YFR031C-A    RPL2A

YGL030W       RPL30

YGL031C        RPL24A

YGL103W       RPL28

YGL104C        VPS73

YGL123W       RPS2

YGL124C        MON1

YGL189C        RPS26A

YGR033C

YGR034W      RPL26B

YGR117C

YGR118W      RPS23A

YGR148C       RPL24B

YGR149W

YHR021C       RPS27B

YHR021W-A  ECM12

YHR033W

YHR096C       HXT5

YHR141C       RPL42B

YHR142W      CHS7

YHR203C       RPS4B

YHR204W      MNL1

YIL018W        RPL2B

YIL121W

YIL133C         RPL16A

YIL148W        RPL40A

YIL149C         MLP2

YJL089W        SIP4

YJL090C         DPB11

YJL134W        LCB3

YJL136C         RPS21B

YJL177W        RPL17B

YJL178C

YJL189W        RPL39

YJL190C         RPS22A

YJL191W        RPS14B

YJL192C

YJR058C         APS2

YJR059W        PTK2

YKL006C-A   SFT1

YKL006W      RPL14A

YKL062W      MSN4

YKL063C

YKL180W      RPL17A

YLL039C        UBI4

YLR044C        PDC1

YLR047C

YLR048W       RPS0B

YLR287C-A    RPS30A

YLR333C        RPS25B

YLR344W       RPL26A

YLR387C

YLR388W       RPS29A

YLR399C        BDF1

YLR447C        VMA6

YLR448W       RPL6B

YML024W      RPS17A

YML025C

YML026C       RPS18B

YML063W      RPS1B

YML064C       TEM1

YML073C       RPL6A

YMR015C       ERG5

YMR142C       RPL13B

YMR143W      RPS16A

YMR242C       RPL20A

YNL069C       RPL16B

YNL096C       RPS7B

YNL142W      MEP2

YNL144C

YNL162W      RPL42A

YNL162W-A

YNL163C       RIA1

YNL302C       RPS19B

YNL329C       PEX6

YOL039W      RPP2A

YOL040C       RPS15

YOL052C-A   DDR2

YOL059W      GPD2

YOL060C       MAM3

YOL082W      CVT19

YOL109W

YOL127W      RPL25

YOL128C       YGK3

YOL136C       PFK27

YOR095C       RKI1

YOR096W      RPS7A

YOR179C

YOR234C       RPL33B

YOR292C

YOR293W      RPS10A

YOR302W

YOR303W      CPA1

YOR312C       RPL20B

YOR338W

YOR342C

YOR344C       TYE7

YOR365C

YOR367W      SCP1

YPL016W       SWI1

YPL017C

YPL131W       RPL5

YPL143W       RPL33A

YPL144W

YPL145C        KES1

YPL249C-A    RPL36B

YPR029C        APL4

YPR030W       CSR2

YPR080W       TEF1

YPR102C        RPL11A

YPR103W       PRE2

YPR131C        NAT3

YPR132W       RPS23B

 

Genes Not Found:

 

SNR17A

SNR17B

SNR34

TE%28UUC%29L

TP%28UGG%29O3

YCR024C-B

YGL188C-A

YMR242W-A

YOR343W-A

YOR343W-B

MIPS Functional Classification

Category          p-value In Category from Cluster          k          f

ribosome biogenesis      1e-14   RPL23A RPL19A RPS6B RPS9B RPL21A RPL31A RPL13A RPS16B RPL41B RPL35B RPL41A RPL35A RPS11A RPS13 RPL12B RPS18A RPL27B RPL37B RPL12A RPS24A RPL23B RPL22B RPL2A RPL30 RPL24A RPL28 RPS2 RPS26A RPL26B RPS23A RPL24B RPS27B RPL42B RPS4B RPL2B RPL16A RPL40A RPS21B RPL17B RPL39 RPS22A RPS14B RPL14A RPL17A RPS0B RPS30A RPS25B RPL26A RPS29A RPL6B RPS17A YML025C RPS18B RPS1B RPL6A RPL13B RPS16A RPL20A RPL16B RPS7B RPL42A RPS19B RPP2A RPS15 RPL25 RPS7A RPL33B RPS10A RPL20B RPL5 RPL33A RPL36B RPL11A RPS23B     74            215

PROTEIN SYNTHESIS          1e-14   RPL23A RPL19A RPS6B RPS9B RPL21A RPL31A RPL13A RPS16B RPL41B RPL35B RPL41A RPL35A RPS11A RPS13 RPL12B RPS18A RPL27B RPL37B RPL12A RPS24A RPL23B FRS2 RPL22B RPL2A RPL30 RPL24A RPL28 RPS2 RPS26A RPL26B RPS23A RPL24B RPS27B RPL42B RPS4B RPL2B RPL16A RPL40A RPS21B RPL17B RPL39 RPS22A RPS14B RPL14A RPL17A UBI4 RPS0B RPS30A RPS25B RPL26A RPS29A RPL6B RPS17A YML025C RPS18B RPS1B RPL6A RPL13B RPS16A RPL20A RPL16B RPS7B RPL42A RIA1 RPS19B RPP2A RPS15 RPL25 RPS7A RPL33B RPS10A YOR302W RPL20B RPL5 RPL33A RPL36B TEF1 RPL11A RPS23B     79        359

SUBCELLULAR LOCALISATION   1e-14   POP5 PIM1 RPL23A RPL19A AAC3 RPS6B RPS9B RPL21A PMP1 RPL31A RPL13A RPS16B RPL41B RPL35B RPL41A RPL35A RPS11A RPS13 CCT6 RPL12B RPS18A RPL27B RPL37B GEA2 RPL12A YPT31 RPS24A RPL23B GAT1 FRS2 RPL30 RPL24A RPL28 RPS2 RPS26A RPL26B RPS23A RPL24B RPS27B HXT5 RPL42B CHS7 RPS4B RPL2B RPL16A RPL40A MLP2 SIP4 DPB11 RPS21B RPL17B RPL39 RPS22A RPS14B APS2 SFT1 RPL14A MSN4 RPL17A UBI4 PDC1 RPS0B RPS30A RPS25B RPL26A RPS29A BDF1 VMA6 RPL6B RPS17A YML025C RPS18B RPS1B RPL6A ERG5 RPL13B RPS16A RPL20A RPL16B RPS7B MEP2 RPL42A RPS19B PEX6 RPP2A RPS15 GPD2 RPL25 RKI1 RPS7A RPS10A YOR302W CPA1 RPL20B TYE7 SWI1 RPL5 RPL33A KES1 RPL36B TEF1 RPL11A PRE2 RPS23B      104            2256

cytoplasm         1.14353e-14    RPL23A RPL19A RPS6B RPS9B RPL21A RPL31A RPL13A RPS16B RPL41B RPL35B RPL41A RPL35A RPS11A RPS13 CCT6 RPL12B RPS18A RPL27B RPL37B RPL12A RPS24A RPL23B FRS2 RPL30 RPL24A RPL28 RPS2 RPS26A RPL26B RPS23A RPL24B RPS27B RPL42B RPS4B RPL2B RPL16A RPL40A RPS21B RPL17B RPL39 RPS22A RPS14B RPL14A MSN4 RPL17A UBI4 PDC1 RPS0B RPS30A RPS25B RPL26A RPS29A RPL6B RPS17A RPS18B RPS1B RPL6A RPL13B RPS16A RPL20A RPL16B RPS7B RPL42A RPS19B PEX6 RPP2A RPS15 RPL25 RKI1 RPS7A RPS10A YOR302W CPA1 RPL20B RPL5 RPL33A KES1 RPL36B TEF1 RPL11A RPS23B         81        554

 

 

 

MIPS Phenotypes

Category          p-value In Category from Cluster          k          f

 

 

 

MIPS Subcellular Localization

Category          p-value In Category from Cluster          k          f

cytoplasm         1.4766e-14      RPL23A RPL19A RPS6B RPS9B RPL21A RPL31A RPL13A RPS16B RPL41B RPL35B RPL41A RPL35A RPS11A RPS13 CCT6 RPL12B RPS18A RPL27B RPL37B RPL12A RPS24A RPL23B FRS2 RPL30 RPL24A RPL28 RPS2 RPS26A RPL26B RPS23A RPL24B RPS27B RPL42B RPS4B RPL2B RPL16A RPL40A RPS21B RPL17B RPL39 RPS22A RPS14B RPL14A MSN4 RPL17A UBI4 PDC1 RPS0B RPS30A RPS25B RPL26A RPS29A RPL6B RPS17A RPS18B RPS1B RPL6A RPL13B RPS16A RPL20A RPL16B RPS7B RPL42A RPS19B PEX6 RPP2A RPS15 RPL25 RKI1 RPS7A RPL33B RPS10A YOR302W CPA1 RPL20B RPL5 RPL33A KES1 RPL36B TEF1 RPL11A RPS23B      82        593

 

 

 

MIPS Protein Complexes

Category          p-value In Category from Cluster          k          f

cytoplasmic ribosomal large subunit       1e-14   RPL23A RPL19A RPL21A RPL31A RPL13A RPL41B RPL35B RPL41A RPL35A RPL12B RPL27B RPL37B RPL12A RPL23B RPL22B RPL2A RPL30 RPL24A RPL28 RPL26B RPL24B RPL42B RPL2B RPL16A RPL40A RPL17B RPL39 RPL14A RPL17A RPL26A RPL6B RPL6A RPL13B RPL20A RPL16B RPL42A RPP2A RPL25 RPL33B RPL20B RPL5 RPL33A RPL36B RPL11A     44        81

Cytoplasmic ribosomes 1e-14   RPL23A RPL19A RPS6B RPS9B RPL21A RPL31A RPL13A RPS16B RPL41B RPL35B RPL41A RPL35A RPS11A RPS13 RPL12B RPS18A RPL27B RPL37B RPL12A RPS24A RPL23B RPL22B RPL2A RPL30 RPL24A RPL28 RPS2 RPS26A RPL26B RPS23A RPL24B RPS27B RPL42B RPS4B RPL2B RPL16A RPL40A RPS21B RPL17B RPL39 RPS22A RPS14B RPL14A RPL17A RPS0B RPS30A RPS25B RPL26A RPS29A RPL6B RPS17A RPS18B RPS1B RPL6A RPL13B RPS16A RPL20A RPL16B RPS7B RPL42A RPS19B RPP2A RPS15 RPL25 RPS7A RPL33B RPS10A RPL20B RPL5 RPL33A RPL36B RPL11A RPS23B       73        138

cytoplasmic ribosomal small subunit       1e-14   RPS6B RPS9B RPS16B RPS11A RPS13 RPS18A RPS24A RPS2 RPS26A RPS23A RPS27B RPS4B RPS21B RPS22A RPS14B RPS0B RPS30A RPS25B RPS29A RPS17A RPS18B RPS1B RPS16A RPS7B RPS19B RPS15 RPS7A RPS10A RPS23B             29        57

Translation complexes   1e-14   RPL23A RPL19A RPS6B RPS9B RPL21A RPL31A RPL13A RPS16B RPL41B RPL35B RPL41A RPL35A RPS11A RPS13 RPL12B RPS18A RPL27B RPL37B RPL12A RPS24A RPL23B RPL22B RPL2A RPL30 RPL24A RPL28 RPS2 RPS26A RPL26B RPS23A RPL24B RPS27B RPL42B RPS4B RPL2B RPL16A RPL40A RPS21B RPL17B RPL39 RPS22A RPS14B RPL14A RPL17A RPS0B RPS30A RPS25B RPL26A RPS29A RPL6B RPS17A RPS18B RPS1B RPL6A RPL13B RPS16A RPL20A RPL16B RPS7B RPL42A RPS19B RPP2A RPS15 RPL25 RPS7A RPL33B RPS10A RPL20B RPL5 RPL33A RPL36B TEF1 RPL11A RPS23B          74            240

 

 

 

MIPS Protein Classes

Category          p-value In Category from Cluster          k          f

 

 

 

GO Molecular Function

Category          p-value In Category from Cluster          k          f

structural constituent of ribosome [GO:0003735]          1e-14   RPL23A RPL19A RPS6B RPS9B RPL21A RPL31A RPL13A RPS16B RPL41B RPL35B RPL41A RPL35A RPS11A RPS13 RPL12B RPS18A RPL27B RPL37B RPL12A RPS24A RPL23B RPL22B RPL2A RPL30 RPL24A RPL28 RPS2 RPS26A RPL26B RPS23A RPL24B RPS27B RPL42B RPS4B RPL2B RPL16A RPL40A RPS21B RPL17B RPL39 RPS22A RPS14B RPL14A RPL17A RPS0B RPS30A RPS25B RPL26A RPS29A RPL6B RPS17A YML025C RPS18B RPS1B RPL6A RPL13B RPS16A RPL20A RPL16B RPS7B RPL42A RPS19B RPP2A RPS15 RPL25 RPS7A RPL33B RPS10A RPL20B RPL5 RPL33A RPL36B RPL11A RPS23B     74        206

structural molecule [GO:0005198]        1e-14   RPL23A RPL19A RPS6B RPS9B RPL21A RPL31A RPL13A RPS16B RPL41B RPL35B RPL41A RPL35A RPS11A RPS13 RPL12B RPS18A RPL27B RPL37B RPL12A RPS24A RPL23B RPL22B RPL2A RPL30 RPL24A RPL28 RPS2 RPS26A RPL26B RPS23A RPL24B RPS27B RPL42B RPS4B RPL2B RPL16A RPL40A RPS21B RPL17B RPL39 RPS22A RPS14B RPL14A RPL17A RPS0B RPS30A RPS25B RPL26A RPS29A RPL6B RPS17A YML025C RPS18B RPS1B RPL6A RPL13B RPS16A RPL20A RPL16B RPS7B RPL42A RPS19B RPP2A RPS15 RPL25 RPS7A RPL33B RPS10A RPL20B RPL5 RPL33A RPL36B RPL11A RPS23B           74        310

 

 

 

GO Biological Process

Category          p-value In Category from Cluster          k          f

protein biosynthesis [GO:0006412]       1e-14   RPL23A RPL19A RPS6B RPS9B RPL21A RPL31A RPL13A RPS16B RPL41B RPL35B RPL41A PPH22 RPL35A RPS11A RPS13 RPL12B RPS18A RPL27B RPL37B RPL12A RPS24A RPL23B FRS2 RPL22B RPL2A RPL30 RPL24A RPL28 RPS2 RPS26A RPL26B RPS23A RPL24B RPS27B RPL42B RPS4B RPL2B RPL16A RPL40A RPS21B RPL17B RPL39 RPS22A RPS14B RPL14A RPL17A RPS0B RPS30A RPS25B RPL26A RPS29A RPL6B RPS17A YML025C RPS18B RPS1B RPL6A RPL13B RPS16A RPL20A RPL16B RPS7B RPL42A RPS19B RPP2A RPS15 RPL25 RPS7A RPL33B RPS10A RPL20B RPL5 RPL33A RPL36B TEF1 RPL11A RPS23B        77        415

macromolecule biosynthesis [GO:0009059]      1e-14   RPL23A RPL19A RPS6B RPS9B RPL21A RPL31A RPL13A RPS16B RPL41B RPL35B RPL41A PPH22 RPL35A RPS11A RPS13 RPL12B RPS18A RPL27B RPL37B RPL12A RPS24A RPL23B FRS2 RPL22B RPL2A RPL30 RPL24A RPL28 RPS2 RPS26A RPL26B RPS23A RPL24B RPS27B RPL42B CHS7 RPS4B RPL2B RPL16A RPL40A RPS21B RPL17B RPL39 RPS22A RPS14B RPL14A RPL17A RPS0B RPS30A RPS25B RPL26A RPS29A RPL6B RPS17A YML025C RPS18B RPS1B RPL6A RPL13B RPS16A RPL20A RPL16B RPS7B RPL42A RPS19B RPP2A RPS15 RPL25 RPS7A RPL33B RPS10A RPL20B RPL5 RPL33A RPL36B TEF1 RPL11A RPS23B       78        422

biosynthesis [GO:0009058]      1e-14   RPL23A RPL19A RPS6B RPS9B RPL21A RPL31A RPL13A RPS16B RPL41B RPL35B RPL41A PPH22 RPL35A RPS11A RPS13 RPL12B RPS18A RPL27B RPL37B RPL12A RPS24A RPL23B FRS2 RPL22B RPL2A RPL30 RPL24A RPL28 RPS2 RPS26A RPL26B RPS23A RPL24B RPS27B RPL42B CHS7 RPS4B RPL2B RPL16A RPL40A SIP4 LCB3 RPS21B RPL17B RPL39 RPS22A RPS14B RPL14A RPL17A RPS0B RPS30A RPS25B RPL26A RPS29A RPL6B RPS17A YML025C RPS18B RPS1B RPL6A ERG5 RPL13B RPS16A RPL20A RPL16B RPS7B RPL42A RPS19B RPP2A RPS15 RPL25 RPS7A RPL33B RPS10A CPA1 RPL20B RPL5 RPL33A KES1 RPL36B TEF1 RPL11A RPS23B      83        731

protein metabolism [GO:0019538]        1e-14   PIM1 RPL23A RPL19A RPS6B RPS9B RPL21A RPL31A RPL13A RPS16B RPL41B RPL35B RPL41A PPH22 RPL35A RPS11A RPS13 CCT6 RPL12B RPS18A RPL27B RPL37B GEA2 RPL12A YPT31 RPS24A RPL23B FRS2 RPL22B RPL2A RPL30 RPL24A RPL28 VPS73 RPS2 MON1 RPS26A RPL26B RPS23A RPL24B RPS27B RPL42B CHS7 RPS4B MNL1 RPL2B RPL16A RPL40A MLP2 RPS21B RPL17B RPL39 RPS22A RPS14B SFT1 RPL14A RPL17A UBI4 RPS0B RPS30A RPS25B RPL26A RPS29A RPL6B RPS17A YML025C RPS18B RPS1B RPL6A RPL13B RPS16A RPL20A RPL16B RPS7B RPL42A RPS19B RPP2A RPS15 CVT19 RPL25 YGK3 RPS7A RPL33B RPS10A RPL20B RPL5 RPL33A RPL36B TEF1 RPL11A PRE2 NAT3 RPS23B           92        1168

metabolism [GO:0008152]       1.43134e-11    POP5 PIM1 RPL23A RPL19A RPS6B NTC20 RPS9B RPL21A RPL31A RPL13A RPS16B RPL41B RPL35B RPL41A PPH22 RPL35A RPS11A RPS13 CCT6 RPL12B UTP6 RPS18A RPL27B RPL37B GEA2 RPL12A YPT31 FIR1 RPS24A SLX8 RPL23B GAT1 FRS2 RPL22B RPL2A RPL30 RPL24A RPL28 VPS73 RPS2 MON1 RPS26A RPL26B RPS23A RPL24B RPS27B RPL42B CHS7 RPS4B MNL1 RPL2B RPL16A RPL40A MLP2 SIP4 DPB11 LCB3 RPS21B RPL17B RPL39 RPS22A RPS14B SFT1 RPL14A MSN4 RPL17A UBI4 PDC1 RPS0B RPS30A RPS25B RPL26A RPS29A RPL6B RPS17A YML025C RPS18B RPS1B RPL6A ERG5 RPL13B RPS16A RPL20A RPL16B RPS7B RPL42A RPS19B RPP2A RPS15 GPD2 CVT19 RPL25 YGK3 PFK27 RKI1 RPS7A RPL33B RPS10A CPA1 RPL20B TYE7 SWI1 RPL5 RPL33A KES1 RPL36B TEF1 RPL11A PRE2 NAT3 RPS23B           111      2693

ribosomal subunit assembly [GO:0042257]       1.15823e-10    RPS11A SSF2 RPL12B RPL12A RPS14B RPS0B RPL6B RPS17A YML025C RPL6A RPL25 RPL5 RPL11A 13        48

ribosome assembly [GO:0042255]       2.03764e-10    RPS11A SSF2 RPL12B RPL12A RPS14B RPS0B RPL6B RPS17A YML025C RPL6A RPL25 RPL5 RPL11A   13        50

cell growth and/or maintenance [GO:0008151] 2.58103e-09    POP5 PIM1 RPL23A RPL19A AAC3 RPS6B NTC20 RPS9B RPL21A PMP1 RPL31A RPL13A RPS16B RPL41B RPL35B RPL41A PPH22 RPL35A RPS11A RPS13 CCT6 SSF2 RPL12B UTP6 RPS18A UGO1 RPL27B RPL37B GEA2 RPL12A YPT31 FIR1 RPS24A SLX8 RPL23B GAT1 FRS2 RPL22B RPL2A RPL30 RPL24A RPL28 VPS73 RPS2 MON1 RPS26A RPL26B RPS23A RPL24B RPS27B ECM12 HXT5 RPL42B CHS7 RPS4B MNL1 RPL2B RPL16A RPL40A MLP2 SIP4 DPB11 LCB3 RPS21B RPL17B RPL39 RPS22A RPS14B APS2 PTK2 SFT1 RPL14A MSN4 RPL17A UBI4 PDC1 RPS0B RPS30A RPS25B RPL26A RPS29A BDF1 VMA6 RPL6B RPS17A YML025C RPS18B RPS1B TEM1 RPL6A ERG5 RPL13B RPS16A RPL20A RPL16B RPS7B MEP2 RPL42A RIA1 RPS19B PEX6 RPP2A RPS15 DDR2 GPD2 MAM3 CVT19 RPL25 YGK3 PFK27 RKI1 RPS7A RPL33B RPS10A CPA1 RPL20B TYE7 SWI1 RPL5 RPL33A KES1 RPL36B APL4 CSR2 TEF1 RPL11A PRE2 NAT3 RPS23B 129      3657

ribosomal large subunit assembly and maintenance [GO:0000027]         1.55268e-07    SSF2 RPL12B RPL12A RPL6B YML025C RPL6A RPL25 RPL5 RPL11A     9          35

regulation of translational fidelity [GO:0006450]            2.11981e-07    RPS9B RPS11A RPS2 RPS23A RPS23B       5            7

ribosome biogenesis and assembly [GO:0042254]        8.89632e-07    POP5 RPS11A SSF2 RPL12B UTP6 RPL12A RPL30 RPS14B RPS0B RPL6B RPS17A YML025C RPL6A RIA1 RPL25 RPL5 RPL11A 17        165

regulation of translation [GO:0006445] 3.09361e-05    RPS9B RPS11A RPL30 RPS2 RPS23A RPS23B       6          25

 

 

 

GO Cellular Component

Category          p-value In Category from Cluster          k          f

cytosolic large ribosomal subunit (sensu Eukarya) [GO:0005842]          1e-14   RPL23A RPL19A RPL21A RPL31A RPL13A RPL41B RPL35B RPL41A RPL35A RPL12B RPL27B RPL37B RPL12A RPL23B RPL22B RPL2A RPL30 RPL24A RPL28 RPL26B RPL24B RPL42B RPL2B RPL16A RPL40A RPL17B RPL39 RPL14A RPL17A RPL26A RPL6B RPL6A RPL13B RPL20A RPL16B RPL42A RPP2A RPL25 RPL33B RPL20B RPL5 RPL33A RPL36B RPL11A          44        83

cytosolic ribosome (sensu Eukarya) [GO:0005830]       1e-14   RPL23A RPL19A RPS6B RPS9B RPL21A RPL31A RPL13A RPS16B RPL41B RPL35B RPL41A RPL35A RPS11A RPS13 RPL12B RPS18A RPL27B RPL37B RPL12A RPS24A RPL23B RPL22B RPL2A RPL30 RPL24A RPL28 RPS2 RPS26A RPL26B RPS23A RPL24B RPS27B RPL42B RPS4B RPL2B RPL16A RPL40A RPS21B RPL17B RPL39 RPS22A RPS14B RPL14A RPL17A RPS0B RPS30A RPS25B RPL26A RPS29A RPL6B RPS17A RPS18B RPS1B RPL6A RPL13B RPS16A RPL20A RPL16B RPS7B RPL42A RPS19B RPP2A RPS15 RPL25 RPS7A RPL33B RPS10A RPL20B RPL5 RPL33A RPL36B RPL11A RPS23B        73        151

cytosolic small ribosomal subunit (sensu Eukarya) [GO:0005843]          1e-14   RPS6B RPS9B RPS16B RPS11A RPS13 RPS18A RPS24A RPS2 RPS26A RPS23A RPS27B RPS4B RPS21B RPS22A RPS14B RPS0B RPS30A RPS25B RPS29A RPS17A RPS18B RPS1B RPS16A RPS7B RPS19B RPS15 RPS7A RPS10A RPS23B     29        61

eukaryotic 48S initiation complex [GO:0016283]          1e-14   RPS6B RPS9B RPS16B RPS11A RPS13 RPS18A RPS24A RPS2 RPS26A RPS23A RPS27B RPS4B RPS21B RPS22A RPS14B RPS0B RPS30A RPS25B RPS29A RPS17A RPS18B RPS1B RPS16A RPS7B RPS19B RPS15 RPS7A RPS10A RPS23B        29        61

eukaryotic 43S pre-initiation complex [GO:0016282]    1e-14   RPS6B RPS9B RPS16B RPS11A RPS13 RPS18A RPS24A RPS2 RPS26A RPS23A RPS27B RPS4B RPS21B RPS22A RPS14B RPS0B RPS30A RPS25B RPS29A RPS17A RPS18B RPS1B RPS16A RPS7B RPS19B RPS15 RPS7A RPS10A RPS23B        29        67

 

large ribosomal subunit [GO:0015934]  1e-14   RPL23A RPL19A RPL21A RPL31A RPL13A RPL41B RPL35B RPL41A RPL35A RPL12B RPL27B RPL37B RPL12A RPL23B RPL22B RPL2A RPL30 RPL24A RPL28 RPL26B RPL24B RPL42B RPL2B RPL16A RPL40A RPL17B RPL39 RPL14A RPL17A RPL26A RPL6B YML025C RPL6A RPL13B RPL20A RPL16B RPL42A RPP2A RPL25 RPL33B RPL20B RPL5 RPL33A RPL36B RPL11A   45        122

small ribosomal subunit [GO:0015935] 1e-14   RPS6B RPS9B RPS16B RPS11A RPS13 RPS18A RPS24A RPS2 RPS26A RPS23A RPS27B RPS4B RPS21B RPS22A RPS14B RPS0B RPS30A RPS25B RPS29A RPS17A RPS18B RPS1B RPS16A RPS7B RPS19B RPS15 RPS7A RPS10A RPS23B             29        88

ribosome [GO:0005840]          1e-14   RPL23A RPL19A RPS6B RPS9B RPL21A RPL31A RPL13A RPS16B RPL41B RPL35B RPL41A RPL35A RPS11A RPS13 RPL12B RPS18A RPL27B RPL37B RPL12A RPS24A RPL23B RPL22B RPL2A RPL30 RPL24A RPL28 RPS2 RPS26A RPL26B RPS23A RPL24B RPS27B RPL42B RPS4B RPL2B RPL16A RPL40A RPS21B RPL17B RPL39 RPS22A RPS14B RPL14A RPL17A RPS0B RPS30A RPS25B RPL26A RPS29A RPL6B RPS17A YML025C RPS18B RPS1B RPL6A RPL13B RPS16A RPL20A RPL16B RPS7B RPL42A RPS19B RPP2A RPS15 RPL25 RPS7A RPL33B RPS10A RPL20B RPL5 RPL33A RPL36B TEF1 RPL11A RPS23B             75        258

cytosol [GO:0005829] 1e-14   RPL23A RPL19A RPS6B RPS9B RPL21A RPL31A RPL13A RPS16B RPL41B RPL35B RPL41A RPL35A RPS11A RPS13 RPL12B RPS18A RPL27B RPL37B RPL12A RPS24A RPL23B RPL22B RPL2A RPL30 RPL24A RPL28 RPS2 RPS26A RPL26B RPS23A RPL24B RPS27B RPL42B RPS4B RPL2B RPL16A RPL40A RPS21B RPL17B RPL39 RPS22A RPS14B RPL14A RPL17A RPS0B RPS30A RPS25B RPL26A RPS29A RPL6B RPS17A RPS18B RPS1B RPL6A RPL13B RPS16A RPL20A RPL16B RPS7B RPL42A RPS19B RPP2A RPS15 GPD2 RPL25 RPS7A RPL33B RPS10A CPA1 RPL20B RPL5 RPL33A RPL36B RPL11A PRE2 RPS23B           76        310

ribonucleoprotein complex [GO:0030529]        1e-14   POP5 RPL23A RPL19A RPS6B NTC20 RPS9B RPL21A RPL31A RPL13A RPS16B RPL41B RPL35B RPL41A RPL35A RPS11A RPS13 RPL12B UTP6 RPS18A RPL27B RPL37B RPL12A RPS24A RPL23B RPL22B RPL2A RPL30 RPL24A RPL28 RPS2 RPS26A RPL26B RPS23A RPL24B RPS27B RPL42B RPS4B RPL2B RPL16A RPL40A RPS21B RPL17B RPL39 RPS22A RPS14B RPL14A RPL17A RPS0B RPS30A RPS25B RPL26A RPS29A RPL6B RPS17A YML025C RPS18B RPS1B RPL6A RPL13B RPS16A RPL20A RPL16B RPS7B RPL42A RPS19B RPP2A RPS15 RPL25 RPS7A RPL33B RPS10A RPL20B RPL5 RPL33A RPL36B TEF1 RPL11A RPS23B       78        380

cytoplasm [GO:0005737]         1e-14   PIM1 RPL23A RPL19A AAC3 RPS6B RPS9B RPL21A RPL31A RPL13A RPS16B RPL41B RPL35B RPL41A RPL35A RPS11A RPS13 CCT6 RPL12B RPS18A UGO1 RPL27B RPL37B GEA2 RPL12A RPS24A RPL23B FRS2 RPL22B RPL2A RPL30 RPL24A RPL28 RPS2 RPS26A RPL26B RPS23A RPL24B RPS27B YHR033W RPL42B CHS7 RPS4B MNL1 RPL2B RPL16A RPL40A LCB3 RPS21B RPL17B RPL39 RPS22A RPS14B APS2 SFT1 RPL14A RPL17A UBI4 RPS0B RPS30A RPS25B RPL26A RPS29A VMA6 RPL6B RPS17A YML025C RPS18B RPS1B TEM1 RPL6A ERG5 RPL13B RPS16A RPL20A RPL16B RPS7B RPL42A RIA1 RPS19B PEX6 RPP2A RPS15 GPD2 CVT19 RPL25 PFK27 RPS7A RPL33B RPS10A CPA1 RPL20B RPL5 RPL33A RPL36B APL4 TEF1 RPL11A PRE2 RPS23B        99        1810

intracellular [GO:0005622]       2.69002e-10    POP5 PIM1 RPL23A RPL19A AAC3 RPS6B NTC20 RPS9B RPL21A RPL31A RPL13A RPS16B RPL41B RPL35B RPL41A RPL35A RPS11A RPS13 CCT6 SSF2 RPL12B UTP6 RPS18A UGO1 RPL27B RPL37B GEA2 RPL12A RPS24A SLX8 RPL23B GAT1 FRS2 RPL22B RPL2A RPL30 RPL24A RPL28 RPS2 RPS26A RPL26B RPS23A RPL24B RPS27B YHR033W HXT5 RPL42B CHS7 RPS4B MNL1 RPL2B RPL16A RPL40A MLP2 SIP4 DPB11 LCB3 RPS21B RPL17B RPL39 RPS22A RPS14B APS2 SFT1 RPL14A MSN4 RPL17A UBI4 RPS0B RPS30A RPS25B RPL26A RPS29A BDF1 VMA6 RPL6B RPS17A YML025C RPS18B RPS1B TEM1 RPL6A ERG5 RPL13B RPS16A RPL20A RPL16B RPS7B MEP2 RPL42A RIA1 RPS19B PEX6 RPP2A RPS15 GPD2 CVT19 RPL25 PFK27 RPS7A RPL33B RPS10A CPA1 RPL20B TYE7 SWI1 RPL5 RPL33A RPL36B APL4 TEF1 RPL11A PRE2 RPS23B           114      2921

cell [GO:0005623]       9.43595e-09    POP5 PIM1 RPL23A RPL19A AAC3 RPS6B NTC20 RPS9B RPL21A PMP1 RPL31A RPL13A RPS16B RPL41B RPL35B RPL41A RPL35A RPS11A RPS13 CCT6 SSF2 RPL12B UTP6 RPS18A UGO1 RPL27B RPL37B GEA2 RPL12A RPS24A SLX8 RPL23B GAT1 FRS2 RPL22B RPL2A RPL30 RPL24A RPL28 RPS2 RPS26A RPL26B RPS23A RPL24B RPS27B YHR033W HXT5 RPL42B CHS7 RPS4B MNL1 RPL2B RPL16A RPL40A MLP2 SIP4 DPB11 LCB3 RPS21B RPL17B RPL39 RPS22A RPS14B APS2 SFT1 RPL14A MSN4 RPL17A UBI4 RPS0B RPS30A RPS25B RPL26A RPS29A BDF1 VMA6 RPL6B RPS17A YML025C RPS18B RPS1B TEM1 RPL6A ERG5 RPL13B RPS16A RPL20A RPL16B RPS7B MEP2 RPL42A RIA1 RPS19B PEX6 RPP2A RPS15 GPD2 CVT19 RPL25 PFK27 RPS7A RPL33B RPS10A CPA1 RPL20B TYE7 SWI1 RPL5 RPL33A RPL36B APL4 TEF1 RPL11A PRE2 RPS23B           115      3106

 

 

 

SMART Domains

Category          p-value In Category from Cluster          k          f

 

 

 

PFam-A Domains

Category          p-value In Category from Cluster          k          f

PF00467 (KOW)        7.20004e-06    RPL27B RPL26B RPS4B RPL14A RPL26A 5          12

 

 

 

Yeast Two Hybrid - Uetz

Category          p-value In Category from Cluster          k          f

 

 

 

Yeast Two Hybrid - Ito (core)

Category          p-value In Category from Cluster          k          f

 

 

 

Yeast Two Hybrid - Ito (full)

Category          p-value In Category from Cluster          k          f

 

 

 

Synthetic Genetic Array Analysis

Category          p-value In Category from Cluster          k          f

YDR162C (NBP2)      0.00464289     MON1 RPS23A RPL16A RPS18B     4          27

 

 

 

MDS Proteomics Complexes

Category          p-value In Category from Cluster          k          f

 

 

 

Cellzome Complexes

Category          p-value In Category from Cluster          k          f

YBR031W (RPL4A)   1.54321e-14    RPL13A RPL12B RPL27B RPL28 RPL2B RPS14B RPL17A RPL6A RPL13B RPL20A RPL16B RPL25 RPL20B RPL33A RPL36B            15        39

 

 

 

Proteome Localization--Observed

Category          p-value In Category from Cluster          k          f

 

 

 

Proteome Localization--Predicted+Observed

Category          p-value In Category from Cluster          k          f

cyt        1.5303e-08      FUN19 RPL23A AAC3 RPS6B RPS9B RPL21A RPL31A RXT3 RPL13A RPS16B YDL133W RPL35B RPL41A YDL186W PPH22 RPL35A RPS11A RPS13 YDR186C CCT6 SSF2 RPL12B UTP6 RPS18A UGO1 RPL27B RPL37B GEA2 YEL023C RPL12A YEL075C RPS24A SLX8 RPL23B FRS2 RPL30 RPL24A RPL28 RPS2 MON1 RPS26A YGR033C RPL26B YGR117C RPS23A RPL24B RPS27B YHR033W HXT5 RPL42B CHS7 RPS4B MNL1 RPL2B YIL121W RPL16A RPL40A SIP4 RPS21B RPL17B YJL178C RPL39 RPS22A RPS14B RPL14A RPL17A UBI4 PDC1 RPS0B RPS25B RPL26A YLR387C RPS29A VMA6 RPL6B RPS17A RPS18B RPS1B RPL6A RPL13B RPS16A RPL20A RPL16B RPS7B MEP2 YNL144C RPL42A RIA1 RPS19B PEX6 RPP2A RPS15 YOL109W RPL25 YGK3 PFK27 RKI1 RPS7A YOR179C RPL33B YOR292C RPS10A CPA1 RPL20B YOR342C TYE7 SCP1 YPL017C RPL5 RPL33A KES1 CSR2 TEF1 RPL11A PRE2 NAT3 RPS23B             117      3210

 

 

 

Deletions Consortium (Essentiality, Morphology)

Category          p-value In Category from Cluster          k          f

 

 

 

Yeast Fitness Data

Category          p-value In Category from Cluster          k          f

Slow Growers  4.37303e-06    RPL19A RPS6B RPS9B RPL21A RPL31A RPL35A RPS11A RPL12B RPS18A RPS24A SLX8 RPL23B RPS23A RPS27B RPS4B RPS21B RPL39 RPL14A PDC1 YLR047C BDF1 VMA6 RPL6B RPS17A RPS1B RPL6A RPL13B RPS16A RPL16B RPS19B RPS7A RPS10A YPL017C NAT3 RPS23B             35            617

 

 

 

Published Complexes

Category          p-value In Category from Cluster          k          f

Andersen et al. (2002) - Curr Bio 12:1-            5.47368e-09    RPS6B RPS9B RPL31A RPS11A RPS13 RPL12B RPL27B RPL28 RPL26B RPL2B RPL16A RPL17A UBI4 RPL6B RPS18B RPS1B RPL13B RPS16A RPL25 RPL5             20        165


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Rap1-LeeChIP-2SD.FunSpec.txt

 Input Cluster (n=119)

YAL033W       POP5

YAL034C        FUN19

YBL022C        PIM1

YBR181C        RPS6B

YBR188C        NTC20

YBR189W       RPS9B

YDL075W       RPL31A

YDL076C        RXT3

YDL082W       RPL13A

YDL083C        RPS16B

YDL133C-A   RPL41B

YDL133W

YDL136W       RPL35B

YDL184C        RPL41A

YDL186W

YDL188C        PPH22

YDL191W       RPL35A

YDR186C

YDR188W      CCT6

YDR418W      RPL12B

YDR449C       UTP6

YDR450W      RPS18A

YDR470C       UGO1

YDR471W      RPL27B

YDR500C       RPL37B

YDR501W      PLM2

YEL022W       GEA2

YEL023C

YEL054C        RPL12A

YER074W       RPS24A

YER116C        SLX8

YER117W       RPL23B

YFR031C-A    RPL2A

YGL030W       RPL30

YGL031C        RPL24A

YGL103W       RPL28

YGL104C        VPS73

YGL123W       RPS2

YGL124C        MON1

YGL189C        RPS26A

YGR033C

YGR034W      RPL26B

YGR117C

YGR118W      RPS23A

YGR148C       RPL24B

YGR149W

YHR021C       RPS27B

YHR021W-A  ECM12

YHR033W

YHR096C       HXT5

YHR141C       RPL42B

YHR142W      CHS7

YHR203C       RPS4B

YHR204W      MNL1

YIL018W        RPL2B

YIL148W        RPL40A

YIL149C         MLP2

YJL089W        SIP4

YJL090C         DPB11

YJL134W        LCB3

YJL136C         RPS21B

YJL177W        RPL17B

YJL178C

YJL189W        RPL39

YJL190C         RPS22A

YJL191W        RPS14B

YJL192C

YJR058C         APS2

YJR059W        PTK2

YKL006C-A   SFT1

YKL006W      RPL14A

YKL180W      RPL17A

YLL039C        UBI4

YLR044C        PDC1

YLR047C

YLR048W       RPS0B

YLR333C        RPS25B

YLR387C

YLR388W       RPS29A

YLR399C        BDF1

YLR447C        VMA6

YLR448W       RPL6B

YML024W      RPS17A

YML025C

YML026C       RPS18B

YML073C       RPL6A

YMR015C       ERG5

YMR142C       RPL13B

YMR143W      RPS16A

YMR242C       RPL20A

YNL069C       RPL16B

YNL162W      RPL42A

YNL162W-A

YNL163C       RIA1

YNL302C       RPS19B

YOL039W      RPP2A

YOL040C       RPS15

YOL059W      GPD2

YOL060C       MAM3

YOL109W

YOL127W      RPL25

YOL128C       YGK3

YOL136C       PFK27

YOR095C       RKI1

YOR096W      RPS7A

YOR292C

YOR293W      RPS10A

YOR312C       RPL20B

YOR338W

YOR344C       TYE7

YOR365C

YOR367W      SCP1

YPL131W       RPL5

YPL143W       RPL33A

YPL144W

YPL145C        KES1

YPR080W       TEF1

YPR102C        RPL11A

YPR103W       PRE2

 

Genes Not Found:

 

SNR17B

SNR34

TE%28UUC%29L

TP%28UGG%29O3

YGL188C-A

YMR242W-A

MIPS Functional Classification

Category          p-value In Category from Cluster          k          f

ribosome biogenesis      1e-14   RPS6B RPS9B RPL31A RPL13A RPS16B RPL41B RPL35B RPL41A RPL35A RPL12B RPS18A RPL27B RPL37B RPL12A RPS24A RPL23B RPL2A RPL30 RPL24A RPL28 RPS2 RPS26A RPL26B RPS23A RPL24B RPS27B RPL42B RPS4B RPL2B RPL40A RPS21B RPL17B RPL39 RPS22A RPS14B RPL14A RPL17A RPS0B RPS25B RPS29A RPL6B RPS17A YML025C RPS18B RPL6A RPL13B RPS16A RPL20A RPL16B RPL42A RPS19B RPP2A RPS15 RPL25 RPS7A RPS10A RPL20B RPL5 RPL33A RPL11A       60        215

PROTEIN SYNTHESIS          1e-14   RPS6B RPS9B RPL31A RPL13A RPS16B RPL41B RPL35B RPL41A RPL35A RPL12B RPS18A RPL27B RPL37B RPL12A RPS24A RPL23B RPL2A RPL30 RPL24A RPL28 RPS2 RPS26A RPL26B RPS23A RPL24B RPS27B RPL42B RPS4B RPL2B RPL40A RPS21B RPL17B RPL39 RPS22A RPS14B RPL14A RPL17A UBI4 RPS0B RPS25B RPS29A RPL6B RPS17A YML025C RPS18B RPL6A RPL13B RPS16A RPL20A RPL16B RPL42A RIA1 RPS19B RPP2A RPS15 RPL25 RPS7A RPS10A RPL20B RPL5 RPL33A TEF1 RPL11A          63        359

cytoplasm         1.52101e-14    RPS6B RPS9B RPL31A RPL13A RPS16B RPL41B RPL35B RPL41A RPL35A CCT6 RPL12B RPS18A RPL27B RPL37B RPL12A RPS24A RPL23B RPL30 RPL24A RPL28 RPS2 RPS26A RPL26B RPS23A RPL24B RPS27B RPL42B RPS4B RPL2B RPL40A RPS21B RPL17B RPL39 RPS22A RPS14B RPL14A RPL17A UBI4 PDC1 RPS0B RPS25B RPS29A RPL6B RPS17A RPS18B RPL6A RPL13B RPS16A RPL20A RPL16B RPL42A RPS19B RPP2A RPS15 RPL25 RKI1 RPS7A RPS10A RPL20B RPL5 RPL33A KES1 TEF1 RPL11A          64        554

SUBCELLULAR LOCALISATION   7.20313e-13    POP5 PIM1 RPS6B RPS9B RPL31A RPL13A RPS16B RPL41B RPL35B RPL41A RPL35A CCT6 RPL12B RPS18A RPL27B RPL37B GEA2 RPL12A RPS24A RPL23B RPL30 RPL24A RPL28 RPS2 RPS26A RPL26B RPS23A RPL24B RPS27B HXT5 RPL42B CHS7 RPS4B RPL2B RPL40A MLP2 SIP4 DPB11 RPS21B RPL17B RPL39 RPS22A RPS14B APS2 SFT1 RPL14A RPL17A UBI4 PDC1 RPS0B RPS25B RPS29A BDF1 VMA6 RPL6B RPS17A YML025C RPS18B RPL6A ERG5 RPL13B RPS16A RPL20A RPL16B RPL42A RPS19B RPP2A RPS15 GPD2 RPL25 RKI1 RPS7A RPS10A RPL20B TYE7 RPL5 RPL33A KES1 TEF1 RPL11A PRE2    81        2256

 

 

 

MIPS Phenotypes

Category          p-value In Category from Cluster          k          f

Cycloheximide resistance          0.000221027   RPL28 RPL42B RPL42A        3          7

 

 

 

MIPS Subcellular Localization

Category          p-value In Category from Cluster          k          f

cytoplasm         1.31006e-14    RPS6B RPS9B RPL31A RPL13A RPS16B RPL41B RPL35B RPL41A RPL35A CCT6 RPL12B RPS18A RPL27B RPL37B RPL12A RPS24A RPL23B RPL30 RPL24A RPL28 RPS2 RPS26A RPL26B RPS23A RPL24B RPS27B RPL42B RPS4B RPL2B RPL40A RPS21B RPL17B RPL39 RPS22A RPS14B RPL14A RPL17A UBI4 PDC1 RPS0B RPS25B RPS29A RPL6B RPS17A RPS18B RPL6A RPL13B RPS16A RPL20A RPL16B RPL42A RPS19B RPP2A RPS15 RPL25 RKI1 RPS7A RPS10A RPL20B RPL5 RPL33A KES1 TEF1 RPL11A          64        593

 

 

 

MIPS Protein Complexes

Category          p-value In Category from Cluster          k          f

cytoplasmic ribosomal large subunit       1e-14   RPL31A RPL13A RPL41B RPL35B RPL41A RPL35A RPL12B RPL27B RPL37B RPL12A RPL23B RPL2A RPL30 RPL24A RPL28 RPL26B RPL24B RPL42B RPL2B RPL40A RPL17B RPL39 RPL14A RPL17A RPL6B RPL6A RPL13B RPL20A RPL16B RPL42A RPP2A RPL25 RPL20B RPL5 RPL33A RPL11A          36        81

Cytoplasmic ribosomes 1e-14   RPS6B RPS9B RPL31A RPL13A RPS16B RPL41B RPL35B RPL41A RPL35A RPL12B RPS18A RPL27B RPL37B RPL12A RPS24A RPL23B RPL2A RPL30 RPL24A RPL28 RPS2 RPS26A RPL26B RPS23A RPL24B RPS27B RPL42B RPS4B RPL2B RPL40A RPS21B RPL17B RPL39 RPS22A RPS14B RPL14A RPL17A RPS0B RPS25B RPS29A RPL6B RPS17A RPS18B RPL6A RPL13B RPS16A RPL20A RPL16B RPL42A RPS19B RPP2A RPS15 RPL25 RPS7A RPS10A RPL20B RPL5 RPL33A RPL11A          59        138

cytoplasmic ribosomal small subunit       1e-14   RPS6B RPS9B RPS16B RPS18A RPS24A RPS2 RPS26A RPS23A RPS27B RPS4B RPS21B RPS22A RPS14B RPS0B RPS25B RPS29A RPS17A RPS18B RPS16A RPS19B RPS15 RPS7A RPS10A          23        57

Translation complexes   1e-14   RPS6B RPS9B RPL31A RPL13A RPS16B RPL41B RPL35B RPL41A RPL35A RPL12B RPS18A RPL27B RPL37B RPL12A RPS24A RPL23B RPL2A RPL30 RPL24A RPL28 RPS2 RPS26A RPL26B RPS23A RPL24B RPS27B RPL42B RPS4B RPL2B RPL40A RPS21B RPL17B RPL39 RPS22A RPS14B RPL14A RPL17A RPS0B RPS25B RPS29A RPL6B RPS17A RPS18B RPL6A RPL13B RPS16A RPL20A RPL16B RPL42A RPS19B RPP2A RPS15 RPL25 RPS7A RPS10A RPL20B RPL5 RPL33A TEF1 RPL11A            60        240

 

 

 

MIPS Protein Classes

Category          p-value In Category from Cluster          k          f

 

 

 

GO Molecular Function

Category          p-value In Category from Cluster          k          f

structural constituent of ribosome [GO:0003735]          1e-14   RPS6B RPS9B RPL31A RPL13A RPS16B RPL41B RPL35B RPL41A RPL35A RPL12B RPS18A RPL27B RPL37B RPL12A RPS24A RPL23B RPL2A RPL30 RPL24A RPL28 RPS2 RPS26A RPL26B RPS23A RPL24B RPS27B RPL42B RPS4B RPL2B RPL40A RPS21B RPL17B RPL39 RPS22A RPS14B RPL14A RPL17A RPS0B RPS25B RPS29A RPL6B RPS17A YML025C RPS18B RPL6A RPL13B RPS16A RPL20A RPL16B RPL42A RPS19B RPP2A RPS15 RPL25 RPS7A RPS10A RPL20B RPL5 RPL33A RPL11A        60        206

structural molecule [GO:0005198]        1e-14   RPS6B RPS9B RPL31A RPL13A RPS16B RPL41B RPL35B RPL41A RPL35A RPL12B RPS18A RPL27B RPL37B RPL12A RPS24A RPL23B RPL2A RPL30 RPL24A RPL28 RPS2 RPS26A RPL26B RPS23A RPL24B RPS27B RPL42B RPS4B RPL2B RPL40A RPS21B RPL17B RPL39 RPS22A RPS14B RPL14A RPL17A RPS0B RPS25B RPS29A RPL6B RPS17A YML025C RPS18B RPL6A RPL13B RPS16A RPL20A RPL16B RPL42A RPS19B RPP2A RPS15 RPL25 RPS7A RPS10A RPL20B RPL5 RPL33A RPL11A    60            310

 

 

 

GO Biological Process

Category          p-value In Category from Cluster          k          f

protein biosynthesis [GO:0006412]       1e-14   RPS6B RPS9B RPL31A RPL13A RPS16B RPL41B RPL35B RPL41A PPH22 RPL35A RPL12B RPS18A RPL27B RPL37B RPL12A RPS24A RPL23B RPL2A RPL30 RPL24A RPL28 RPS2 RPS26A RPL26B RPS23A RPL24B RPS27B RPL42B RPS4B RPL2B RPL40A RPS21B RPL17B RPL39 RPS22A RPS14B RPL14A RPL17A RPS0B RPS25B RPS29A RPL6B RPS17A YML025C RPS18B RPL6A RPL13B RPS16A RPL20A RPL16B RPL42A RPS19B RPP2A RPS15 RPL25 RPS7A RPS10A RPL20B RPL5 RPL33A TEF1 RPL11A          62        415

macromolecule biosynthesis [GO:0009059]      1e-14   RPS6B RPS9B RPL31A RPL13A RPS16B RPL41B RPL35B RPL41A PPH22 RPL35A RPL12B RPS18A RPL27B RPL37B RPL12A RPS24A RPL23B RPL2A RPL30 RPL24A RPL28 RPS2 RPS26A RPL26B RPS23A RPL24B RPS27B RPL42B CHS7 RPS4B RPL2B RPL40A RPS21B RPL17B RPL39 RPS22A RPS14B RPL14A RPL17A RPS0B RPS25B RPS29A RPL6B RPS17A YML025C RPS18B RPL6A RPL13B RPS16A RPL20A RPL16B RPL42A RPS19B RPP2A RPS15 RPL25 RPS7A RPS10A RPL20B RPL5 RPL33A TEF1 RPL11A            63        422

biosynthesis [GO:0009058]      1e-14   RPS6B RPS9B RPL31A RPL13A RPS16B RPL41B RPL35B RPL41A PPH22 RPL35A RPL12B RPS18A RPL27B RPL37B RPL12A RPS24A RPL23B RPL2A RPL30 RPL24A RPL28 RPS2 RPS26A RPL26B RPS23A RPL24B RPS27B RPL42B CHS7 RPS4B RPL2B RPL40A SIP4 LCB3 RPS21B RPL17B RPL39 RPS22A RPS14B RPL14A RPL17A RPS0B RPS25B RPS29A RPL6B RPS17A YML025C RPS18B RPL6A ERG5 RPL13B RPS16A RPL20A RPL16B RPL42A RPS19B RPP2A RPS15 RPL25 RPS7A RPS10A RPL20B RPL5 RPL33A KES1 TEF1 RPL11A           67        731

protein metabolism [GO:0019538]        1e-14   PIM1 RPS6B RPS9B RPL31A RPL13A RPS16B RPL41B RPL35B RPL41A PPH22 RPL35A CCT6 RPL12B RPS18A RPL27B RPL37B GEA2 RPL12A RPS24A RPL23B RPL2A RPL30 RPL24A RPL28 VPS73 RPS2 MON1 RPS26A RPL26B RPS23A RPL24B RPS27B RPL42B CHS7 RPS4B MNL1 RPL2B RPL40A MLP2 RPS21B RPL17B RPL39 RPS22A RPS14B SFT1 RPL14A RPL17A UBI4 RPS0B RPS25B RPS29A RPL6B RPS17A YML025C RPS18B RPL6A RPL13B RPS16A RPL20A RPL16B RPL42A RPS19B RPP2A RPS15 RPL25 YGK3 RPS7A RPS10A RPL20B RPL5 RPL33A TEF1 RPL11A PRE2     74            1168

metabolism [GO:0008152]       4.51017e-12    POP5 PIM1 RPS6B NTC20 RPS9B RPL31A RPL13A RPS16B RPL41B RPL35B RPL41A PPH22 RPL35A CCT6 RPL12B UTP6 RPS18A RPL27B RPL37B GEA2 RPL12A RPS24A SLX8 RPL23B RPL2A RPL30 RPL24A RPL28 VPS73 RPS2 MON1 RPS26A RPL26B RPS23A RPL24B RPS27B RPL42B CHS7 RPS4B MNL1 RPL2B RPL40A MLP2 SIP4 DPB11 LCB3 RPS21B RPL17B RPL39 RPS22A RPS14B SFT1 RPL14A RPL17A UBI4 PDC1 RPS0B RPS25B RPS29A RPL6B RPS17A YML025C RPS18B RPL6A ERG5 RPL13B RPS16A RPL20A RPL16B RPL42A RPS19B RPP2A RPS15 GPD2 RPL25 YGK3 PFK27 RKI1 RPS7A RPS10A RPL20B TYE7 RPL5 RPL33A KES1 TEF1 RPL11A PRE2             88        2693

ribosomal subunit assembly [GO:0042257]       9.07443e-10    RPL12B RPL12A RPS14B RPS0B RPL6B RPS17A YML025C RPL6A RPL25 RPL5 RPL11A     11        48

ribosome assembly [GO:0042255]       1.453e-09        RPL12B RPL12A RPS14B RPS0B RPL6B RPS17A YML025C RPL6A RPL25 RPL5 RPL11A            11        50

cell growth and/or maintenance [GO:0008151] 5.0178e-08      POP5 PIM1 RPS6B NTC20 RPS9B RPL31A RPL13A RPS16B RPL41B RPL35B RPL41A PPH22 RPL35A CCT6 RPL12B UTP6 RPS18A UGO1 RPL27B RPL37B GEA2 RPL12A RPS24A SLX8 RPL23B RPL2A RPL30 RPL24A RPL28 VPS73 RPS2 MON1 RPS26A RPL26B RPS23A RPL24B RPS27B ECM12 HXT5 RPL42B CHS7 RPS4B MNL1 RPL2B RPL40A MLP2 SIP4 DPB11 LCB3 RPS21B RPL17B RPL39 RPS22A RPS14B APS2 PTK2 SFT1 RPL14A RPL17A UBI4 PDC1 RPS0B RPS25B RPS29A BDF1 VMA6 RPL6B RPS17A YML025C RPS18B RPL6A ERG5 RPL13B RPS16A RPL20A RPL16B RPL42A RIA1 RPS19B RPP2A RPS15 GPD2 MAM3 RPL25 YGK3 PFK27 RKI1 RPS7A RPS10A RPL20B TYE7 RPL5 RPL33A KES1 TEF1 RPL11A PRE2             97        3657

ribosomal large subunit assembly and maintenance [GO:0000027]         2.04643e-07    RPL12B RPL12A RPL6B YML025C RPL6A RPL25 RPL5 RPL11A     8          35

ribosome biogenesis and assembly [GO:0042254]        4.1256e-07      POP5 RPL12B UTP6 RPL12A RPL30 RPS14B RPS0B RPL6B RPS17A YML025C RPL6A RIA1 RPL25 RPL5 RPL11A    15        165

 

 

 

GO Cellular Component

Category          p-value In Category from Cluster          k          f

cytosolic large ribosomal subunit (sensu Eukarya) [GO:0005842]          1e-14   RPL31A RPL13A RPL41B RPL35B RPL41A RPL35A RPL12B RPL27B RPL37B RPL12A RPL23B RPL2A RPL30 RPL24A RPL28 RPL26B RPL24B RPL42B RPL2B RPL40A RPL17B RPL39 RPL14A RPL17A RPL6B RPL6A RPL13B RPL20A RPL16B RPL42A RPP2A RPL25 RPL20B RPL5 RPL33A RPL11A      36        83

cytosolic ribosome (sensu Eukarya) [GO:0005830]       1e-14   RPS6B RPS9B RPL31A RPL13A RPS16B RPL41B RPL35B RPL41A RPL35A RPL12B RPS18A RPL27B RPL37B RPL12A RPS24A RPL23B RPL2A RPL30 RPL24A RPL28 RPS2 RPS26A RPL26B RPS23A RPL24B RPS27B RPL42B RPS4B RPL2B RPL40A RPS21B RPL17B RPL39 RPS22A RPS14B RPL14A RPL17A RPS0B RPS25B RPS29A RPL6B RPS17A RPS18B RPL6A RPL13B RPS16A RPL20A RPL16B RPL42A RPS19B RPP2A RPS15 RPL25 RPS7A RPS10A RPL20B RPL5 RPL33A RPL11A          59        151

eukaryotic 48S initiation complex [GO:0016283]          1e-14   RPS6B RPS9B RPS16B RPS18A RPS24A RPS2 RPS26A RPS23A RPS27B RPS4B RPS21B RPS22A RPS14B RPS0B RPS25B RPS29A RPS17A RPS18B RPS16A RPS19B RPS15 RPS7A RPS10A       23        61

cytosolic small ribosomal subunit (sensu Eukarya) [GO:0005843]          1e-14   RPS6B RPS9B RPS16B RPS18A RPS24A RPS2 RPS26A RPS23A RPS27B RPS4B RPS21B RPS22A RPS14B RPS0B RPS25B RPS29A RPS17A RPS18B RPS16A RPS19B RPS15 RPS7A RPS10A 23        61

eukaryotic 43S pre-initiation complex [GO:0016282]    1e-14   RPS6B RPS9B RPS16B RPS18A RPS24A RPS2 RPS26A RPS23A RPS27B RPS4B RPS21B RPS22A RPS14B RPS0B RPS25B RPS29A RPS17A RPS18B RPS16A RPS19B RPS15 RPS7A RPS10A       23        67

large ribosomal subunit [GO:0015934]  1e-14   RPL31A RPL13A RPL41B RPL35B RPL41A RPL35A RPL12B RPL27B RPL37B RPL12A RPL23B RPL2A RPL30 RPL24A RPL28 RPL26B RPL24B RPL42B RPL2B RPL40A RPL17B RPL39 RPL14A RPL17A RPL6B YML025C RPL6A RPL13B RPL20A RPL16B RPL42A RPP2A RPL25 RPL20B RPL5 RPL33A RPL11A       37        122

small ribosomal subunit [GO:0015935] 1e-14   RPS6B RPS9B RPS16B RPS18A RPS24A RPS2 RPS26A RPS23A RPS27B RPS4B RPS21B RPS22A RPS14B RPS0B RPS25B RPS29A RPS17A RPS18B RPS16A RPS19B RPS15 RPS7A RPS10A          23        88

ribosome [GO:0005840]          1e-14   RPS6B RPS9B RPL31A RPL13A RPS16B RPL41B RPL35B RPL41A RPL35A RPL12B RPS18A RPL27B RPL37B RPL12A RPS24A RPL23B RPL2A RPL30 RPL24A RPL28 RPS2 RPS26A RPL26B RPS23A RPL24B RPS27B RPL42B RPS4B RPL2B RPL40A RPS21B RPL17B RPL39 RPS22A RPS14B RPL14A RPL17A RPS0B RPS25B RPS29A RPL6B RPS17A YML025C RPS18B RPL6A RPL13B RPS16A RPL20A RPL16B RPL42A RPS19B RPP2A RPS15 RPL25 RPS7A RPS10A RPL20B RPL5 RPL33A TEF1 RPL11A         61            258

cytosol [GO:0005829] 1e-14   RPS6B RPS9B RPL31A RPL13A RPS16B RPL41B RPL35B RPL41A RPL35A RPL12B RPS18A RPL27B RPL37B RPL12A RPS24A RPL23B RPL2A RPL30 RPL24A RPL28 RPS2 RPS26A RPL26B RPS23A RPL24B RPS27B RPL42B RPS4B RPL2B RPL40A RPS21B RPL17B RPL39 RPS22A RPS14B RPL14A RPL17A RPS0B RPS25B RPS29A RPL6B RPS17A RPS18B RPL6A RPL13B RPS16A RPL20A RPL16B RPL42A RPS19B RPP2A RPS15 GPD2 RPL25 RPS7A RPS10A RPL20B RPL5 RPL33A RPL11A PRE2             61            310

ribonucleoprotein complex [GO:0030529]        1e-14   POP5 RPS6B NTC20 RPS9B RPL31A RPL13A RPS16B RPL41B RPL35B RPL41A RPL35A RPL12B UTP6 RPS18A RPL27B RPL37B RPL12A RPS24A RPL23B RPL2A RPL30 RPL24A RPL28 RPS2 RPS26A RPL26B RPS23A RPL24B RPS27B RPL42B RPS4B RPL2B RPL40A RPS21B RPL17B RPL39 RPS22A RPS14B RPL14A RPL17A RPS0B RPS25B RPS29A RPL6B RPS17A YML025C RPS18B RPL6A RPL13B RPS16A RPL20A RPL16B RPL42A RPS19B RPP2A RPS15 RPL25 RPS7A RPS10A RPL20B RPL5 RPL33A TEF1 RPL11A         64        380

cytoplasm [GO:0005737]         1e-14   PIM1 RPS6B RPS9B RPL31A RPL13A RPS16B RPL41B RPL35B RPL41A RPL35A CCT6 RPL12B RPS18A UGO1 RPL27B RPL37B GEA2 RPL12A RPS24A RPL23B RPL2A RPL30 RPL24A RPL28 RPS2 RPS26A RPL26B RPS23A RPL24B RPS27B YHR033W RPL42B CHS7 RPS4B MNL1 RPL2B RPL40A LCB3 RPS21B RPL17B RPL39 RPS22A RPS14B APS2 SFT1 RPL14A RPL17A UBI4 RPS0B RPS25B RPS29A VMA6 RPL6B RPS17A YML025C RPS18B RPL6A ERG5 RPL13B RPS16A RPL20A RPL16B RPL42A RIA1 RPS19B RPP2A RPS15 GPD2 RPL25 PFK27 RPS7A RPS10A RPL20B RPL5 RPL33A TEF1 RPL11A PRE2            78        1810

intracellular [GO:0005622]       8.79629e-10    POP5 PIM1 RPS6B NTC20 RPS9B RPL31A RPL13A RPS16B RPL41B RPL35B RPL41A RPL35A CCT6 RPL12B UTP6 RPS18A UGO1 RPL27B RPL37B GEA2 RPL12A RPS24A SLX8 RPL23B RPL2A RPL30 RPL24A RPL28 RPS2 RPS26A RPL26B RPS23A RPL24B RPS27B YHR033W HXT5 RPL42B CHS7 RPS4B MNL1 RPL2B RPL40A MLP2 SIP4 DPB11 LCB3 RPS21B RPL17B RPL39 RPS22A RPS14B APS2 SFT1 RPL14A RPL17A UBI4 RPS0B RPS25B RPS29A BDF1 VMA6 RPL6B RPS17A YML025C RPS18B RPL6A ERG5 RPL13B RPS16A RPL20A RPL16B RPL42A RIA1 RPS19B RPP2A RPS15 GPD2 RPL25 PFK27 RPS7A RPS10A RPL20B TYE7 RPL5 RPL33A TEF1 RPL11A PRE2          88            2921

cell [GO:0005623]       3.79708e-08    POP5 PIM1 RPS6B NTC20 RPS9B RPL31A RPL13A RPS16B RPL41B RPL35B RPL41A RPL35A CCT6 RPL12B UTP6 RPS18A UGO1 RPL27B RPL37B GEA2 RPL12A RPS24A SLX8 RPL23B RPL2A RPL30 RPL24A RPL28 RPS2 RPS26A RPL26B RPS23A RPL24B RPS27B YHR033W HXT5 RPL42B CHS7 RPS4B MNL1 RPL2B RPL40A MLP2 SIP4 DPB11 LCB3 RPS21B RPL17B RPL39 RPS22A RPS14B APS2 SFT1 RPL14A RPL17A UBI4 RPS0B RPS25B RPS29A BDF1 VMA6 RPL6B RPS17A YML025C RPS18B RPL6A ERG5 RPL13B RPS16A RPL20A RPL16B RPL42A RIA1 RPS19B RPP2A RPS15 GPD2 RPL25 PFK27 RPS7A RPS10A RPL20B TYE7 RPL5 RPL33A TEF1 RPL11A PRE2         88        3106

 

 

 

SMART Domains

Category          p-value In Category from Cluster          k          f

 

 

 

PFam-A Domains

Category          p-value In Category from Cluster          k          f

 

 

 

Yeast Two Hybrid - Uetz

Category          p-value In Category from Cluster          k          f

 

 

 

Yeast Two Hybrid - Ito (core)

Category          p-value In Category from Cluster          k          f

 

 

 

Yeast Two Hybrid - Ito (full)

Category          p-value In Category from Cluster          k          f

 

 

 

Synthetic Genetic Array Analysis

Category          p-value In Category from Cluster          k          f

 

 

 

MDS Proteomics Complexes

Category          p-value In Category from Cluster          k          f

 

 

 

Cellzome Complexes

Category          p-value In Category from Cluster          k          f

YBR031W (RPL4A)   1e-14   RPL13A RPL12B RPL27B RPL28 RPL2B RPS14B RPL17A RPL6A RPL13B RPL20A RPL16B RPL25 RPL20B RPL33A     14        39

 

 

 

Proteome Localization--Observed

Category          p-value In Category from Cluster          k          f

 

 

 

Proteome Localization--Predicted+Observed

Category          p-value In Category from Cluster          k          f

cyt        8.93297e-10    FUN19 RPS6B RPS9B RPL31A RXT3 RPL13A RPS16B YDL133W RPL35B RPL41A YDL186W PPH22 RPL35A YDR186C CCT6 RPL12B UTP6 RPS18A UGO1 RPL27B RPL37B GEA2 YEL023C RPL12A RPS24A SLX8 RPL23B RPL30 RPL24A RPL28 RPS2 MON1 RPS26A YGR033C RPL26B YGR117C RPS23A RPL24B RPS27B YHR033W HXT5 RPL42B CHS7 RPS4B MNL1 RPL2B RPL40A SIP4 RPS21B RPL17B YJL178C RPL39 RPS22A RPS14B RPL14A RPL17A UBI4 PDC1 RPS0B RPS25B YLR387C RPS29A VMA6 RPL6B RPS17A RPS18B RPL6A RPL13B RPS16A RPL20A RPL16B RPL42A RIA1 RPS19B RPP2A RPS15 YOL109W RPL25 YGK3 PFK27 RKI1 RPS7A YOR292C RPS10A RPL20B TYE7 SCP1 RPL5 RPL33A KES1 TEF1 RPL11A PRE2   93        3210

 

 

 

Deletions Consortium (Essentiality, Morphology)

Category          p-value In Category from Cluster          k          f

 

 

 

Yeast Fitness Data

Category          p-value In Category from Cluster          k          f

Slow Growers  8.30732e-06    RPS6B RPS9B RPL31A RPL35A RPL12B RPS18A RPS24A SLX8 RPL23B RPS23A RPS27B RPS4B RPS21B RPL39 RPL14A PDC1 YLR047C BDF1 VMA6 RPL6B RPS17A RPL6A RPL13B RPS16A RPL16B RPS19B RPS7A RPS10A     28        617

 

 

 

Published Complexes

Category          p-value In Category from Cluster          k          f

Andersen et al. (2002) - Curr Bio 12:1-            6.61342e-08    RPS6B RPS9B RPL31A RPL12B RPL27B RPL28 RPL26B RPL2B RPL17A UBI4 RPL6B RPS18B RPL13B RPS16A RPL25 RPL5    16        165

Harnicharnpai et al. (2001) - Mol Cell 8:505-   0.00369128     RPS2 RPS22A RPS15 RPL5 4          34


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Rap1-LeeChIP-exact.FunSpec.txt

 Input Cluster (n=15)

YBR188C        NTC20

YBR189W       RPS9B

YDL136W       RPL35B

YDR186C

YDR188W      CCT6

YDR500C       RPL37B

YDR501W      PLM2

YGL030W       RPL30

YGL031C        RPL24A

YOL059W      GPD2

YOL060C       MAM3

YOR338W

YPL144W

YPL145C        KES1

YPR080W       TEF1

 

Genes Not Found:

 

MIPS Functional Classification

Category          p-value In Category from Cluster          k          f

cytoplasm         1.30432e-05    RPS9B RPL35B CCT6 RPL37B RPL30 RPL24A KES1 TEF1          8          554

ribosome biogenesis      0.000102824   RPS9B RPL35B RPL37B RPL30 RPL24A     5          215

PROTEIN SYNTHESIS          0.000109032   RPS9B RPL35B RPL37B RPL30 RPL24A TEF1       6          359

 

 

 

MIPS Phenotypes

Category          p-value In Category from Cluster          k          f

 

 

 

MIPS Subcellular Localization

Category          p-value In Category from Cluster          k          f

cytoplasm         2.1628e-05      RPS9B RPL35B CCT6 RPL37B RPL30 RPL24A KES1 TEF1          8          593

 

 

 

MIPS Protein Complexes

Category          p-value In Category from Cluster          k          f

Translation complexes   1.10924e-05    RPS9B RPL35B RPL37B RPL30 RPL24A TEF1       6          240

Cytoplasmic ribosomes 1.2109e-05      RPS9B RPL35B RPL37B RPL30 RPL24A     5          138

cytoplasmic ribosomal large subunit       3.17289e-05    RPL35B RPL37B RPL30 RPL24A     4          81

 

 

 

MIPS Protein Classes

Category          p-value In Category from Cluster          k          f

 

 

 

GO Molecular Function

Category          p-value In Category from Cluster          k          f

 

 

 

GO Biological Process

Category          p-value In Category from Cluster          k          f

 

 

 

GO Cellular Component

Category          p-value In Category from Cluster          k          f

ribonucleoprotein complex [GO:0030529]        1.20061e-05    NTC20 RPS9B RPL35B RPL37B RPL30 RPL24A TEF1             7          380

ribosome [GO:0005840]          1.68071e-05    RPS9B RPL35B RPL37B RPL30 RPL24A TEF1       6          258

cytosolic ribosome (sensu Eukarya) [GO:0005830]       1.8782e-05      RPS9B RPL35B RPL37B RPL30 RPL24A     5            151

cytosolic large ribosomal subunit (sensu Eukarya) [GO:0005842]          3.49459e-05    RPL35B RPL37B RPL30 RPL24A             4          83

cytosol [GO:0005829] 4.78075e-05    RPS9B RPL35B RPL37B RPL30 RPL24A GPD2      6          310

 

 

 

SMART Domains

Category          p-value In Category from Cluster          k          f

 

 

 

PFam-A Domains

Category          p-value In Category from Cluster          k          f

 

 

 

Yeast Two Hybrid - Uetz

Category          p-value In Category from Cluster          k          f

 

 

 

Yeast Two Hybrid - Ito (core)

Category          p-value In Category from Cluster          k          f

 

 

 

Yeast Two Hybrid - Ito (full)

Category          p-value In Category from Cluster          k          f

 

 

 

Synthetic Genetic Array Analysis

Category          p-value In Category from Cluster          k          f

 

 

 

MDS Proteomics Complexes

Category          p-value In Category from Cluster          k          f

 

 

 

Cellzome Complexes

Category          p-value In Category from Cluster          k          f

 

 

 

Proteome Localization--Observed

Category          p-value In Category from Cluster          k          f

 

 

 

Proteome Localization--Predicted+Observed

Category          p-value In Category from Cluster          k          f

 

 

 

Deletions Consortium (Essentiality, Morphology)

Category          p-value In Category from Cluster          k          f

 

 

 

Yeast Fitness Data

Category          p-value In Category from Cluster          k          f

 

 

 

Published Complexes

Category          p-value In Category from Cluster          k          f


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Rap1-PBMandLeeChIP-alldata.FunSpec.txt

Input Cluster (n=137)

YAL033W       POP5

YAL034C        FUN19

YBL022C        PIM1

YBL087C        RPL23A

YBR084C-A   RPL19A

YBR085W       AAC3

YBR181C        RPS6B

YBR188C        NTC20

YBR189W       RPS9B

YBR191W       RPL21A

YDL075W       RPL31A

YDL076C        RXT3

YDL082W       RPL13A

YDL083C        RPS16B

YDL133C-A   RPL41B

YDL133W

YDL136W       RPL35B

YDL184C        RPL41A

YDL186W

YDL188C        PPH22

YDL191W       RPL35A

YDR064W      RPS13

YDR418W      RPL12B

YDR449C       UTP6

YDR450W      RPS18A

YDR470C       UGO1

YDR471W      RPL27B

YDR500C       RPL37B

YDR501W      PLM2

YEL022W       GEA2

YEL023C

YEL054C        RPL12A

YER031C        YPT31

YER032W       FIR1

YER074W       RPS24A

YER116C        SLX8

YER117W       RPL23B

YFL021W       GAT1

YFL022C        FRS2

YFL034C-A    RPL22B

YFL034W

YFR031C-A    RPL2A

YGL030W       RPL30

YGL031C        RPL24A

YGL103W       RPL28

YGL104C        VPS73

YGL123W       RPS2

YGL124C        MON1

YGL189C        RPS26A

YGR033C

YGR034W      RPL26B

YGR117C

YGR118W      RPS23A

YHR021C       RPS27B

YHR021W-A  ECM12

YHR033W

YHR096C       HXT5

YHR141C       RPL42B

YHR142W      CHS7

YHR203C       RPS4B

YHR204W      MNL1

YIL018W        RPL2B

YIL133C         RPL16A

YIL148W        RPL40A

YIL149C         MLP2

YJL089W        SIP4

YJL090C         DPB11

YJL134W        LCB3

YJL136C         RPS21B

YJL189W        RPL39

YJL190C         RPS22A

YJL191W        RPS14B

YJL192C

YJR058C         APS2

YJR059W        PTK2

YKL006C-A   SFT1

YKL006W      RPL14A

YKL180W      RPL17A

YLL039C        UBI4

YLR044C        PDC1

YLR047C

YLR048W       RPS0B

YLR287C-A    RPS30A

YLR333C        RPS25B

YLR344W       RPL26A

YLR387C

YLR388W       RPS29A

YLR399C        BDF1

YLR447C        VMA6

YLR448W       RPL6B

YML024W      RPS17A

YML025C

YML026C       RPS18B

YML063W      RPS1B

YML064C       TEM1

YML073C       RPL6A

YMR015C       ERG5

YMR142C       RPL13B

YMR143W      RPS16A

YMR242C       RPL20A

YNL069C       RPL16B

YNL096C       RPS7B

YNL142W      MEP2

YNL144C

YNL302C       RPS19B

YOL039W      RPP2A

YOL040C       RPS15

YOL052C-A   DDR2

YOL059W      GPD2

YOL060C       MAM3

YOL082W      CVT19

YOL109W

YOL127W      RPL25

YOL128C       YGK3

YOL136C       PFK27

YOR095C       RKI1

YOR096W      RPS7A

YOR179C

YOR234C       RPL33B

YOR292C

YOR293W      RPS10A

YOR302W

YOR303W      CPA1

YOR312C       RPL20B

YOR338W

YOR365C

YOR367W      SCP1

YPL016W       SWI1

YPL017C

YPL131W       RPL5

YPL143W       RPL33A

YPL249C-A    RPL36B

YPR029C        APL4

YPR030W       CSR2

YPR080W       TEF1

YPR102C        RPL11A

YPR103W       PRE2

 

Genes Not Found:

 

 

SNR17A

SNR17B

SNR34

TE%28UUC%29L

YGL188C-A

YMR242W-A

MIPS Functional Classification

Category          p-value In Category from Cluster          k          f

ribosome biogenesis      1e-14   RPL23A RPL19A RPS6B RPS9B RPL21A RPL31A RPL13A RPS16B RPL41B RPL35B RPL41A RPL35A RPS13 RPL12B RPS18A RPL27B RPL37B RPL12A RPS24A RPL23B RPL22B RPL2A RPL30 RPL24A RPL28 RPS2 RPS26A RPL26B RPS23A RPS27B RPL42B RPS4B RPL2B RPL16A RPL40A RPS21B RPL39 RPS22A RPS14B RPL14A RPL17A RPS0B RPS30A RPS25B RPL26A RPS29A RPL6B RPS17A YML025C RPS18B RPS1B RPL6A RPL13B RPS16A RPL20A RPL16B RPS7B RPS19B RPP2A RPS15 RPL25 RPS7A RPL33B RPS10A RPL20B RPL5 RPL33A RPL36B RPL11A           69        215

PROTEIN SYNTHESIS          1.37668e-14    RPL23A RPL19A RPS6B RPS9B RPL21A RPL31A RPL13A RPS16B RPL41B RPL35B RPL41A RPL35A RPS13 RPL12B RPS18A RPL27B RPL37B RPL12A RPS24A RPL23B FRS2 RPL22B RPL2A RPL30 RPL24A RPL28 RPS2 RPS26A RPL26B RPS23A RPS27B RPL42B RPS4B RPL2B RPL16A RPL40A RPS21B RPL39 RPS22A RPS14B RPL14A RPL17A UBI4 RPS0B RPS30A RPS25B RPL26A RPS29A RPL6B RPS17A YML025C RPS18B RPS1B RPL6A RPL13B RPS16A RPL20A RPL16B RPS7B RPS19B RPP2A RPS15 RPL25 RPS7A RPL33B RPS10A YOR302W RPL20B RPL5 RPL33A RPL36B TEF1 RPL11A     73            359

cytoplasm         1.4766e-14      RPL23A RPL19A RPS6B RPS9B RPL21A RPL31A RPL13A RPS16B RPL41B RPL35B RPL41A RPL35A RPS13 RPL12B RPS18A RPL27B RPL37B RPL12A RPS24A RPL23B FRS2 RPL30 RPL24A RPL28 RPS2 RPS26A RPL26B RPS23A RPS27B RPL42B RPS4B RPL2B RPL16A RPL40A RPS21B RPL39 RPS22A RPS14B RPL14A RPL17A UBI4 PDC1 RPS0B RPS30A RPS25B RPL26A RPS29A RPL6B RPS17A RPS18B RPS1B RPL6A RPL13B RPS16A RPL20A RPL16B RPS7B RPS19B RPP2A RPS15 RPL25 RKI1 RPS7A RPS10A YOR302W CPA1 RPL20B RPL5 RPL33A RPL36B TEF1 RPL11A          72        554

SUBCELLULAR LOCALISATION   2.23932e-13    POP5 PIM1 RPL23A RPL19A AAC3 RPS6B RPS9B RPL21A RPL31A RPL13A RPS16B RPL41B RPL35B RPL41A RPL35A RPS13 RPL12B RPS18A RPL27B RPL37B GEA2 RPL12A YPT31 RPS24A RPL23B GAT1 FRS2 RPL30 RPL24A RPL28 RPS2 RPS26A RPL26B RPS23A RPS27B HXT5 RPL42B CHS7 RPS4B RPL2B RPL16A RPL40A MLP2 SIP4 DPB11 RPS21B RPL39 RPS22A RPS14B APS2 SFT1 RPL14A RPL17A UBI4 PDC1 RPS0B RPS30A RPS25B RPL26A RPS29A BDF1 VMA6 RPL6B RPS17A YML025C RPS18B RPS1B RPL6A ERG5 RPL13B RPS16A RPL20A RPL16B RPS7B MEP2 RPS19B RPP2A RPS15 GPD2 RPL25 RKI1 RPS7A RPS10A YOR302W CPA1 RPL20B SWI1 RPL5 RPL33A RPL36B TEF1 RPL11A PRE2   93        2256

 

 

 

MIPS Phenotypes

Category          p-value In Category from Cluster          k          f

 

 

 

MIPS Subcellular Localization

Category          p-value In Category from Cluster          k          f

cytoplasm         1.77636e-14    RPL23A RPL19A RPS6B RPS9B RPL21A RPL31A RPL13A RPS16B RPL41B RPL35B RPL41A RPL35A RPS13 RPL12B RPS18A RPL27B RPL37B RPL12A RPS24A RPL23B FRS2 RPL30 RPL24A RPL28 RPS2 RPS26A RPL26B RPS23A RPS27B RPL42B RPS4B RPL2B RPL16A RPL40A RPS21B RPL39 RPS22A RPS14B RPL14A RPL17A UBI4 PDC1 RPS0B RPS30A RPS25B RPL26A RPS29A RPL6B RPS17A RPS18B RPS1B RPL6A RPL13B RPS16A RPL20A RPL16B RPS7B RPS19B RPP2A RPS15 RPL25 RKI1 RPS7A RPL33B RPS10A YOR302W CPA1 RPL20B RPL5 RPL33A RPL36B TEF1 RPL11A       73        593

 

 

 

MIPS Protein Complexes

Category          p-value In Category from Cluster          k          f

cytoplasmic ribosomal large subunit       1e-14   RPL23A RPL19A RPL21A RPL31A RPL13A RPL41B RPL35B RPL41A RPL35A RPL12B RPL27B RPL37B RPL12A RPL23B RPL22B RPL2A RPL30 RPL24A RPL28 RPL26B RPL42B RPL2B RPL16A RPL40A RPL39 RPL14A RPL17A RPL26A RPL6B RPL6A RPL13B RPL20A RPL16B RPP2A RPL25 RPL33B RPL20B RPL5 RPL33A RPL36B RPL11A             41        81

Cytoplasmic ribosomes 1e-14   RPL23A RPL19A RPS6B RPS9B RPL21A RPL31A RPL13A RPS16B RPL41B RPL35B RPL41A RPL35A RPS13 RPL12B RPS18A RPL27B RPL37B RPL12A RPS24A RPL23B RPL22B RPL2A RPL30 RPL24A RPL28 RPS2 RPS26A RPL26B RPS23A RPS27B RPL42B RPS4B RPL2B RPL16A RPL40A RPS21B RPL39 RPS22A RPS14B RPL14A RPL17A RPS0B RPS30A RPS25B RPL26A RPS29A RPL6B RPS17A RPS18B RPS1B RPL6A RPL13B RPS16A RPL20A RPL16B RPS7B RPS19B RPP2A RPS15 RPL25 RPS7A RPL33B RPS10A RPL20B RPL5 RPL33A RPL36B RPL11A           68        138

cytoplasmic ribosomal small subunit       1e-14   RPS6B RPS9B RPS16B RPS13 RPS18A RPS24A RPS2 RPS26A RPS23A RPS27B RPS4B RPS21B RPS22A RPS14B RPS0B RPS30A RPS25B RPS29A RPS17A RPS18B RPS1B RPS16A RPS7B RPS19B RPS15 RPS7A RPS10A    27        57

Translation complexes   1e-14   RPL23A RPL19A RPS6B RPS9B RPL21A RPL31A RPL13A RPS16B RPL41B RPL35B RPL41A RPL35A RPS13 RPL12B RPS18A RPL27B RPL37B RPL12A RPS24A RPL23B RPL22B RPL2A RPL30 RPL24A RPL28 RPS2 RPS26A RPL26B RPS23A RPS27B RPL42B RPS4B RPL2B RPL16A RPL40A RPS21B RPL39 RPS22A RPS14B RPL14A RPL17A RPS0B RPS30A RPS25B RPL26A RPS29A RPL6B RPS17A RPS18B RPS1B RPL6A RPL13B RPS16A RPL20A RPL16B RPS7B RPS19B RPP2A RPS15 RPL25 RPS7A RPL33B RPS10A RPL20B RPL5 RPL33A RPL36B TEF1 RPL11A 69        240

 

 

 

MIPS Protein Classes

Category          p-value In Category from Cluster          k          f

 

 

 

GO Molecular Function

Category          p-value In Category from Cluster          k          f

structural constituent of ribosome [GO:0003735]          1e-14   RPL23A RPL19A RPS6B RPS9B RPL21A RPL31A RPL13A RPS16B RPL41B RPL35B RPL41A RPL35A RPS13 RPL12B RPS18A RPL27B RPL37B RPL12A RPS24A RPL23B RPL22B RPL2A RPL30 RPL24A RPL28 RPS2 RPS26A RPL26B RPS23A RPS27B RPL42B RPS4B RPL2B RPL16A RPL40A RPS21B RPL39 RPS22A RPS14B RPL14A RPL17A RPS0B RPS30A RPS25B RPL26A RPS29A RPL6B RPS17A YML025C RPS18B RPS1B RPL6A RPL13B RPS16A RPL20A RPL16B RPS7B RPS19B RPP2A RPS15 RPL25 RPS7A RPL33B RPS10A RPL20B RPL5 RPL33A RPL36B RPL11A          69        206

structural molecule [GO:0005198]        1e-14   RPL23A RPL19A RPS6B RPS9B RPL21A RPL31A RPL13A RPS16B RPL41B RPL35B RPL41A RPL35A RPS13 RPL12B RPS18A RPL27B RPL37B RPL12A RPS24A RPL23B RPL22B RPL2A RPL30 RPL24A RPL28 RPS2 RPS26A RPL26B RPS23A RPS27B RPL42B RPS4B RPL2B RPL16A RPL40A RPS21B RPL39 RPS22A RPS14B RPL14A RPL17A RPS0B RPS30A RPS25B RPL26A RPS29A RPL6B RPS17A YML025C RPS18B RPS1B RPL6A RPL13B RPS16A RPL20A RPL16B RPS7B RPS19B RPP2A RPS15 RPL25 RPS7A RPL33B RPS10A RPL20B RPL5 RPL33A RPL36B RPL11A           69        310

 

 

 

GO Biological Process

Category          p-value In Category from Cluster          k          f

protein biosynthesis [GO:0006412]       1e-14   RPL23A RPL19A RPS6B RPS9B RPL21A RPL31A RPL13A RPS16B RPL41B RPL35B RPL41A PPH22 RPL35A RPS13 RPL12B RPS18A RPL27B RPL37B RPL12A RPS24A RPL23B FRS2 RPL22B RPL2A RPL30 RPL24A RPL28 RPS2 RPS26A RPL26B RPS23A RPS27B RPL42B RPS4B RPL2B RPL16A RPL40A RPS21B RPL39 RPS22A RPS14B RPL14A RPL17A RPS0B RPS30A RPS25B RPL26A RPS29A RPL6B RPS17A YML025C RPS18B RPS1B RPL6A RPL13B RPS16A RPL20A RPL16B RPS7B RPS19B RPP2A RPS15 RPL25 RPS7A RPL33B RPS10A RPL20B RPL5 RPL33A RPL36B TEF1 RPL11A             72        415

macromolecule biosynthesis [GO:0009059]      1e-14   RPL23A RPL19A RPS6B RPS9B RPL21A RPL31A RPL13A RPS16B RPL41B RPL35B RPL41A PPH22 RPL35A RPS13 RPL12B RPS18A RPL27B RPL37B RPL12A RPS24A RPL23B FRS2 RPL22B RPL2A RPL30 RPL24A RPL28 RPS2 RPS26A RPL26B RPS23A RPS27B RPL42B CHS7 RPS4B RPL2B RPL16A RPL40A RPS21B RPL39 RPS22A RPS14B RPL14A RPL17A RPS0B RPS30A RPS25B RPL26A RPS29A RPL6B RPS17A YML025C RPS18B RPS1B RPL6A RPL13B RPS16A RPL20A RPL16B RPS7B RPS19B RPP2A RPS15 RPL25 RPS7A RPL33B RPS10A RPL20B RPL5 RPL33A RPL36B TEF1 RPL11A          73            422

biosynthesis [GO:0009058]      1.24345e-14    RPL23A RPL19A RPS6B RPS9B RPL21A RPL31A RPL13A RPS16B RPL41B RPL35B RPL41A PPH22 RPL35A RPS13 RPL12B RPS18A RPL27B RPL37B RPL12A RPS24A RPL23B FRS2 RPL22B RPL2A RPL30 RPL24A RPL28 RPS2 RPS26A RPL26B RPS23A RPS27B RPL42B CHS7 RPS4B RPL2B RPL16A RPL40A SIP4 LCB3 RPS21B RPL39 RPS22A RPS14B RPL14A RPL17A RPS0B RPS30A RPS25B RPL26A RPS29A RPL6B RPS17A YML025C RPS18B RPS1B RPL6A ERG5 RPL13B RPS16A RPL20A RPL16B RPS7B RPS19B RPP2A RPS15 RPL25 RPS7A RPL33B RPS10A CPA1 RPL20B RPL5 RPL33A RPL36B TEF1 RPL11A             77        731

protein metabolism [GO:0019538]        2.77556e-14    PIM1 RPL23A RPL19A RPS6B RPS9B RPL21A RPL31A RPL13A RPS16B RPL41B RPL35B RPL41A PPH22 RPL35A RPS13 RPL12B RPS18A RPL27B RPL37B GEA2 RPL12A YPT31 RPS24A RPL23B FRS2 RPL22B RPL2A RPL30 RPL24A RPL28 VPS73 RPS2 MON1 RPS26A RPL26B RPS23A RPS27B RPL42B CHS7 RPS4B MNL1 RPL2B RPL16A RPL40A MLP2 RPS21B RPL39 RPS22A RPS14B SFT1 RPL14A RPL17A UBI4 RPS0B RPS30A RPS25B RPL26A RPS29A RPL6B RPS17A YML025C RPS18B RPS1B RPL6A RPL13B RPS16A RPL20A RPL16B RPS7B RPS19B RPP2A RPS15 CVT19 RPL25 YGK3 RPS7A RPL33B RPS10A RPL20B RPL5 RPL33A RPL36B TEF1 RPL11A PRE2   85        1168

metabolism [GO:0008152]       4.54969e-13    POP5 PIM1 RPL23A RPL19A RPS6B NTC20 RPS9B RPL21A RPL31A RPL13A RPS16B RPL41B RPL35B RPL41A PPH22 RPL35A RPS13 RPL12B UTP6 RPS18A RPL27B RPL37B GEA2 RPL12A YPT31 FIR1 RPS24A SLX8 RPL23B GAT1 FRS2 RPL22B RPL2A RPL30 RPL24A RPL28 VPS73 RPS2 MON1 RPS26A RPL26B RPS23A RPS27B RPL42B CHS7 RPS4B MNL1 RPL2B RPL16A RPL40A MLP2 SIP4 DPB11 LCB3 RPS21B RPL39 RPS22A RPS14B SFT1 RPL14A RPL17A UBI4 PDC1 RPS0B RPS30A RPS25B RPL26A RPS29A RPL6B RPS17A YML025C RPS18B RPS1B RPL6A ERG5 RPL13B RPS16A RPL20A RPL16B RPS7B RPS19B RPP2A RPS15 GPD2 CVT19 RPL25 YGK3 PFK27 RKI1 RPS7A RPL33B RPS10A CPA1 RPL20B SWI1 RPL5 RPL33A RPL36B TEF1 RPL11A PRE2            101      2693

cell growth and/or maintenance [GO:0008151] 7.33306e-11    POP5 PIM1 RPL23A RPL19A AAC3 RPS6B NTC20 RPS9B RPL21A RPL31A RPL13A RPS16B RPL41B RPL35B RPL41A PPH22 RPL35A RPS13 RPL12B UTP6 RPS18A UGO1 RPL27B RPL37B GEA2 RPL12A YPT31 FIR1 RPS24A SLX8 RPL23B GAT1 FRS2 RPL22B RPL2A RPL30 RPL24A RPL28 VPS73 RPS2 MON1 RPS26A RPL26B RPS23A RPS27B ECM12 HXT5 RPL42B CHS7 RPS4B MNL1 RPL2B RPL16A RPL40A MLP2 SIP4 DPB11 LCB3 RPS21B RPL39 RPS22A RPS14B APS2 PTK2 SFT1 RPL14A RPL17A UBI4 PDC1 RPS0B RPS30A RPS25B RPL26A RPS29A BDF1 VMA6 RPL6B RPS17A YML025C RPS18B RPS1B TEM1 RPL6A ERG5 RPL13B RPS16A RPL20A RPL16B RPS7B MEP2 RPS19B RPP2A RPS15 DDR2 GPD2 MAM3 CVT19 RPL25 YGK3 PFK27 RKI1 RPS7A RPL33B RPS10A CPA1 RPL20B SWI1 RPL5 RPL33A RPL36B APL4 CSR2 TEF1 RPL11A PRE2 115      3657

ribosomal subunit assembly [GO:0042257]       4.1268e-09      RPL12B RPL12A RPS14B RPS0B RPL6B RPS17A YML025C RPL6A RPL25 RPL5 RPL11A     11        48

ribosome assembly [GO:0042255]       6.57264e-09    RPL12B RPL12A RPS14B RPS0B RPL6B RPS17A YML025C RPL6A RPL25 RPL5 RPL11A            11        50

ribosomal large subunit assembly and maintenance [GO:0000027]         6.08124e-07    RPL12B RPL12A RPL6B YML025C RPL6A RPL25 RPL5 RPL11A     8          35

ribosome biogenesis and assembly [GO:0042254]        1.26167e-05    POP5 RPL12B UTP6 RPL12A RPL30 RPS14B RPS0B RPL6B RPS17A YML025C RPL6A RPL25 RPL5 RPL11A 14        165

 

 

 

GO Cellular Component

Category          p-value In Category from Cluster          k          f

cytosolic large ribosomal subunit (sensu Eukarya) [GO:0005842]          1e-14   RPL23A RPL19A RPL21A RPL31A RPL13A RPL41B RPL35B RPL41A RPL35A RPL12B RPL27B RPL37B RPL12A RPL23B RPL22B RPL2A RPL30 RPL24A RPL28 RPL26B RPL42B RPL2B RPL16A RPL40A RPL39 RPL14A RPL17A RPL26A RPL6B RPL6A RPL13B RPL20A RPL16B RPP2A RPL25 RPL33B RPL20B RPL5 RPL33A RPL36B RPL11A      41        83

cytosolic ribosome (sensu Eukarya) [GO:0005830]       1e-14   RPL23A RPL19A RPS6B RPS9B RPL21A RPL31A RPL13A RPS16B RPL41B RPL35B RPL41A RPL35A RPS13 RPL12B RPS18A RPL27B RPL37B RPL12A RPS24A RPL23B RPL22B RPL2A RPL30 RPL24A RPL28 RPS2 RPS26A RPL26B RPS23A RPS27B RPL42B RPS4B RPL2B RPL16A RPL40A RPS21B RPL39 RPS22A RPS14B RPL14A RPL17A RPS0B RPS30A RPS25B RPL26A RPS29A RPL6B RPS17A RPS18B RPS1B RPL6A RPL13B RPS16A RPL20A RPL16B RPS7B RPS19B RPP2A RPS15 RPL25 RPS7A RPL33B RPS10A RPL20B RPL5 RPL33A RPL36B RPL11A           68        151

cytosolic small ribosomal subunit (sensu Eukarya) [GO:0005843]          1e-14   RPS6B RPS9B RPS16B RPS13 RPS18A RPS24A RPS2 RPS26A RPS23A RPS27B RPS4B RPS21B RPS22A RPS14B RPS0B RPS30A RPS25B RPS29A RPS17A RPS18B RPS1B RPS16A RPS7B RPS19B RPS15 RPS7A RPS10A          27        61

eukaryotic 48S initiation complex [GO:0016283]          1e-14   RPS6B RPS9B RPS16B RPS13 RPS18A RPS24A RPS2 RPS26A RPS23A RPS27B RPS4B RPS21B RPS22A RPS14B RPS0B RPS30A RPS25B RPS29A RPS17A RPS18B RPS1B RPS16A RPS7B RPS19B RPS15 RPS7A RPS10A   27        61

eukaryotic 43S pre-initiation complex [GO:0016282]    1e-14   RPS6B RPS9B RPS16B RPS13 RPS18A RPS24A RPS2 RPS26A RPS23A RPS27B RPS4B RPS21B RPS22A RPS14B RPS0B RPS30A RPS25B RPS29A RPS17A RPS18B RPS1B RPS16A RPS7B RPS19B RPS15 RPS7A RPS10A   27        67

large ribosomal subunit [GO:0015934]  1e-14   RPL23A RPL19A RPL21A RPL31A RPL13A RPL41B RPL35B RPL41A RPL35A RPL12B RPL27B RPL37B RPL12A RPL23B RPL22B RPL2A RPL30 RPL24A RPL28 RPL26B RPL42B RPL2B RPL16A RPL40A RPL39 RPL14A RPL17A RPL26A RPL6B YML025C RPL6A RPL13B RPL20A RPL16B RPP2A RPL25 RPL33B RPL20B RPL5 RPL33A RPL36B RPL11A           42        122

small ribosomal subunit [GO:0015935] 1e-14   RPS6B RPS9B RPS16B RPS13 RPS18A RPS24A RPS2 RPS26A RPS23A RPS27B RPS4B RPS21B RPS22A RPS14B RPS0B RPS30A RPS25B RPS29A RPS17A RPS18B RPS1B RPS16A RPS7B RPS19B RPS15 RPS7A RPS10A    27        88

ribosome [GO:0005840]          1e-14   RPL23A RPL19A RPS6B RPS9B RPL21A RPL31A RPL13A RPS16B RPL41B RPL35B RPL41A RPL35A RPS13 RPL12B RPS18A RPL27B RPL37B RPL12A RPS24A RPL23B RPL22B RPL2A RPL30 RPL24A RPL28 RPS2 RPS26A RPL26B RPS23A RPS27B RPL42B RPS4B RPL2B RPL16A RPL40A RPS21B RPL39 RPS22A RPS14B RPL14A RPL17A RPS0B RPS30A RPS25B RPL26A RPS29A RPL6B RPS17A YML025C RPS18B RPS1B RPL6A RPL13B RPS16A RPL20A RPL16B RPS7B RPS19B RPP2A RPS15 RPL25 RPS7A RPL33B RPS10A RPL20B RPL5 RPL33A RPL36B TEF1 RPL11A             70        258

cytosol [GO:0005829] 1e-14   RPL23A RPL19A RPS6B RPS9B RPL21A RPL31A RPL13A RPS16B RPL41B RPL35B RPL41A RPL35A RPS13 RPL12B RPS18A RPL27B RPL37B RPL12A RPS24A RPL23B RPL22B RPL2A RPL30 RPL24A RPL28 RPS2 RPS26A RPL26B RPS23A RPS27B RPL42B RPS4B RPL2B RPL16A RPL40A RPS21B RPL39 RPS22A RPS14B RPL14A RPL17A RPS0B RPS30A RPS25B RPL26A RPS29A RPL6B RPS17A RPS18B RPS1B RPL6A RPL13B RPS16A RPL20A RPL16B RPS7B RPS19B RPP2A RPS15 GPD2 RPL25 RPS7A RPL33B RPS10A CPA1 RPL20B RPL5 RPL33A RPL36B RPL11A PRE2   71        310

ribonucleoprotein complex [GO:0030529]        1e-14   POP5 RPL23A RPL19A RPS6B NTC20 RPS9B RPL21A RPL31A RPL13A RPS16B RPL41B RPL35B RPL41A RPL35A RPS13 RPL12B UTP6 RPS18A RPL27B RPL37B RPL12A RPS24A RPL23B RPL22B RPL2A RPL30 RPL24A RPL28 RPS2 RPS26A RPL26B RPS23A RPS27B RPL42B RPS4B RPL2B RPL16A RPL40A RPS21B RPL39 RPS22A RPS14B RPL14A RPL17A RPS0B RPS30A RPS25B RPL26A RPS29A RPL6B RPS17A YML025C RPS18B RPS1B RPL6A RPL13B RPS16A RPL20A RPL16B RPS7B RPS19B RPP2A RPS15 RPL25 RPS7A RPL33B RPS10A RPL20B RPL5 RPL33A RPL36B TEF1 RPL11A             73        380

cytoplasm [GO:0005737]         1.52212e-13    PIM1 RPL23A RPL19A AAC3 RPS6B RPS9B RPL21A RPL31A RPL13A RPS16B RPL41B RPL35B RPL41A RPL35A RPS13 RPL12B RPS18A UGO1 RPL27B RPL37B GEA2 RPL12A RPS24A RPL23B FRS2 RPL22B RPL2A RPL30 RPL24A RPL28 RPS2 RPS26A RPL26B RPS23A RPS27B YHR033W RPL42B CHS7 RPS4B MNL1 RPL2B RPL16A RPL40A LCB3 RPS21B RPL39 RPS22A RPS14B APS2 SFT1 RPL14A RPL17A UBI4 RPS0B RPS30A RPS25B RPL26A RPS29A VMA6 RPL6B RPS17A YML025C RPS18B RPS1B TEM1 RPL6A ERG5 RPL13B RPS16A RPL20A RPL16B RPS7B RPS19B RPP2A RPS15 GPD2 CVT19 RPL25 PFK27 RPS7A RPL33B RPS10A CPA1 RPL20B RPL5 RPL33A RPL36B APL4 TEF1 RPL11A PRE2            91        1810

intracellular [GO:0005622]       5.96267e-12    POP5 PIM1 RPL23A RPL19A AAC3 RPS6B NTC20 RPS9B RPL21A RPL31A RPL13A RPS16B RPL41B RPL35B RPL41A RPL35A RPS13 RPL12B UTP6 RPS18A UGO1 RPL27B RPL37B GEA2 RPL12A RPS24A SLX8 RPL23B GAT1 FRS2 RPL22B RPL2A RPL30 RPL24A RPL28 RPS2 RPS26A RPL26B RPS23A RPS27B YHR033W HXT5 RPL42B CHS7 RPS4B MNL1 RPL2B RPL16A RPL40A MLP2 SIP4 DPB11 LCB3 RPS21B RPL39 RPS22A RPS14B APS2 SFT1 RPL14A RPL17A UBI4 RPS0B RPS30A RPS25B RPL26A RPS29A BDF1 VMA6 RPL6B RPS17A YML025C RPS18B RPS1B TEM1 RPL6A ERG5 RPL13B RPS16A RPL20A RPL16B RPS7B MEP2 RPS19B RPP2A RPS15 GPD2 CVT19 RPL25 PFK27 RPS7A RPL33B RPS10A CPA1 RPL20B SWI1 RPL5 RPL33A RPL36B APL4 TEF1 RPL11A PRE2           103      2921

cell [GO:0005623]       5.23029e-10    POP5 PIM1 RPL23A RPL19A AAC3 RPS6B NTC20 RPS9B RPL21A RPL31A RPL13A RPS16B RPL41B RPL35B RPL41A RPL35A RPS13 RPL12B UTP6 RPS18A UGO1 RPL27B RPL37B GEA2 RPL12A RPS24A SLX8 RPL23B GAT1 FRS2 RPL22B RPL2A RPL30 RPL24A RPL28 RPS2 RPS26A RPL26B RPS23A RPS27B YHR033W HXT5 RPL42B CHS7 RPS4B MNL1 RPL2B RPL16A RPL40A MLP2 SIP4 DPB11 LCB3 RPS21B RPL39 RPS22A RPS14B APS2 SFT1 RPL14A RPL17A UBI4 RPS0B RPS30A RPS25B RPL26A RPS29A BDF1 VMA6 RPL6B RPS17A YML025C RPS18B RPS1B TEM1 RPL6A ERG5 RPL13B RPS16A RPL20A RPL16B RPS7B MEP2 RPS19B RPP2A RPS15 GPD2 CVT19 RPL25 PFK27 RPS7A RPL33B RPS10A CPA1 RPL20B SWI1 RPL5 RPL33A RPL36B APL4 TEF1 RPL11A PRE2           103      3106

 

 

 

SMART Domains

Category          p-value In Category from Cluster          k          f

 

 

 

PFam-A Domains

Category          p-value In Category from Cluster          k          f

PF00467 (KOW)        3.24978e-06    RPL27B RPL26B RPS4B RPL14A RPL26A 5          12

 

 

 

Yeast Two Hybrid - Uetz

Category          p-value In Category from Cluster          k          f

 

 

 

Yeast Two Hybrid - Ito (core)

Category          p-value In Category from Cluster          k          f

 

 

 

Yeast Two Hybrid - Ito (full)

Category          p-value In Category from Cluster          k          f

 

 

 

Synthetic Genetic Array Analysis

Category          p-value In Category from Cluster          k          f

YDR162C (NBP2)      0.00259511     MON1 RPS23A RPL16A RPS18B     4          27

 

 

 

MDS Proteomics Complexes

Category          p-value In Category from Cluster          k          f

 

 

 

Cellzome Complexes

Category          p-value In Category from Cluster          k          f

YBR031W (RPL4A)   1e-14   RPL13A RPL12B RPL27B RPL28 RPL2B RPS14B RPL17A RPL6A RPL13B RPL20A RPL16B RPL25 RPL20B RPL33A RPL36B   15        39

 

 

 

Proteome Localization--Observed

Category          p-value In Category from Cluster          k          f

 

 

 

Proteome Localization--Predicted+Observed

Category          p-value In Category from Cluster          k          f

cyt        1.20046e-07    FUN19 RPL23A AAC3 RPS6B RPS9B RPL21A RPL31A RXT3 RPL13A RPS16B YDL133W RPL35B RPL41A YDL186W PPH22 RPL35A RPS13 RPL12B UTP6 RPS18A UGO1 RPL27B RPL37B GEA2 YEL023C RPL12A RPS24A SLX8 RPL23B FRS2 RPL30 RPL24A RPL28 RPS2 MON1 RPS26A YGR033C RPL26B YGR117C RPS23A RPS27B YHR033W HXT5 RPL42B CHS7 RPS4B MNL1 RPL2B RPL16A RPL40A SIP4 RPS21B RPL39 RPS22A RPS14B RPL14A RPL17A UBI4 PDC1 RPS0B RPS25B RPL26A YLR387C RPS29A VMA6 RPL6B RPS17A RPS18B RPS1B RPL6A RPL13B RPS16A RPL20A RPL16B RPS7B MEP2 YNL144C RPS19B RPP2A RPS15 YOL109W RPL25 YGK3 PFK27 RKI1 RPS7A YOR179C RPL33B YOR292C RPS10A CPA1 RPL20B SCP1 YPL017C RPL5 RPL33A CSR2 TEF1 RPL11A PRE2           100      3210

 

 

 

Deletions Consortium (Essentiality, Morphology)

Category          p-value In Category from Cluster          k          f

 

 

 

Yeast Fitness Data

Category          p-value In Category from Cluster          k          f

Slow Growers  2.23476e-06    RPL19A RPS6B RPS9B RPL21A RPL31A RPL35A RPL12B RPS18A RPS24A SLX8 RPL23B RPS23A RPS27B RPS4B RPS21B RPL39 RPL14A PDC1 YLR047C BDF1 VMA6 RPL6B RPS17A RPS1B RPL6A RPL13B RPS16A RPL16B RPS19B RPS7A RPS10A YPL017C      32        617

 

 

 

Published Complexes

Category          p-value In Category from Cluster          k          f

Andersen et al. (2002) - Curr Bio 12:1-            2.08803e-09    RPS6B RPS9B RPL31A RPS13 RPL12B RPL27B RPL28 RPL26B RPL2B RPL16A RPL17A UBI4 RPL6B RPS18B RPS1B RPL13B RPS16A RPL25 RPL5            19            165

Harnicharnpai et al. (2001) - Mol Cell 8:505-   0.00609451     RPS2 RPS22A RPS15 RPL5 4          34

 

(go back to top)


Rap1-PBMandLeeChIP-2SD.FunSpec.txt

 Input Cluster (n=107)

YAL033W       POP5

YAL034C        FUN19

YBL022C        PIM1

YBR181C        RPS6B

YBR188C        NTC20

YBR189W       RPS9B

YDL075W       RPL31A

YDL076C        RXT3

YDL082W       RPL13A

YDL083C        RPS16B

YDL133C-A   RPL41B

YDL133W

YDL136W       RPL35B

YDL184C        RPL41A

YDL186W

YDL188C        PPH22

YDL191W       RPL35A

YDR418W      RPL12B

YDR449C       UTP6

YDR450W      RPS18A

YDR470C       UGO1

YDR471W      RPL27B

YDR500C       RPL37B

YDR501W      PLM2

YEL022W       GEA2

YEL023C

YEL054C        RPL12A

YER074W       RPS24A

YER116C        SLX8

YER117W       RPL23B

YFR031C-A    RPL2A

YGL030W       RPL30

YGL031C        RPL24A

YGL103W       RPL28

YGL104C        VPS73

YGL123W       RPS2

YGL124C        MON1

YGL189C        RPS26A

YGR033C

YGR034W      RPL26B

YGR117C

YGR118W      RPS23A

YHR021C       RPS27B

YHR021W-A  ECM12

YHR033W

YHR096C       HXT5

YHR141C       RPL42B

YHR142W      CHS7

YHR203C       RPS4B

YHR204W      MNL1

YIL018W        RPL2B

YIL148W        RPL40A

YIL149C         MLP2

YJL089W        SIP4

YJL090C         DPB11

YJL134W        LCB3

YJL136C         RPS21B

YJL189W        RPL39

YJL190C         RPS22A

YJL191W        RPS14B

YJL192C

YJR058C         APS2

YJR059W        PTK2

YKL006C-A   SFT1

YKL006W      RPL14A

YKL180W      RPL17A

YLL039C        UBI4

YLR044C        PDC1

YLR047C

YLR048W       RPS0B

YLR333C        RPS25B

YLR387C

YLR388W       RPS29A

YLR399C        BDF1

YLR447C        VMA6

YLR448W       RPL6B

YML024W      RPS17A

YML025C

YML026C       RPS18B

YML073C       RPL6A

YMR015C       ERG5

YMR142C       RPL13B

YMR143W      RPS16A

YMR242C       RPL20A

YNL069C       RPL16B

YNL302C       RPS19B

YOL039W      RPP2A

YOL040C       RPS15

YOL059W      GPD2

YOL060C       MAM3

YOL109W

YOL127W      RPL25

YOL128C       YGK3

YOL136C       PFK27

YOR095C       RKI1

YOR096W      RPS7A

YOR292C

YOR293W      RPS10A

YOR312C       RPL20B

YOR338W

YOR365C

YOR367W      SCP1

YPL131W       RPL5

YPL143W       RPL33A

YPR080W       TEF1

YPR102C        RPL11A

YPR103W       PRE2

 

Genes Not Found:

 

SNR17B

SNR34

TE%28UUC%29L

YGL188C-A

YMR242W-A

MIPS Functional Classification

Category          p-value In Category from Cluster          k          f

ribosome biogenesis      1e-14   RPS6B RPS9B RPL31A RPL13A RPS16B RPL41B RPL35B RPL41A RPL35A RPL12B RPS18A RPL27B RPL37B RPL12A RPS24A RPL23B RPL2A RPL30 RPL24A RPL28 RPS2 RPS26A RPL26B RPS23A RPS27B RPL42B RPS4B RPL2B RPL40A RPS21B RPL39 RPS22A RPS14B RPL14A RPL17A RPS0B RPS25B RPS29A RPL6B RPS17A YML025C RPS18B RPL6A RPL13B RPS16A RPL20A RPL16B RPS19B RPP2A RPS15 RPL25 RPS7A RPS10A RPL20B RPL5 RPL33A RPL11A   57        215

PROTEIN SYNTHESIS          1e-14   RPS6B RPS9B RPL31A RPL13A RPS16B RPL41B RPL35B RPL41A RPL35A RPL12B RPS18A RPL27B RPL37B RPL12A RPS24A RPL23B RPL2A RPL30 RPL24A RPL28 RPS2 RPS26A RPL26B RPS23A RPS27B RPL42B RPS4B RPL2B RPL40A RPS21B RPL39 RPS22A RPS14B RPL14A RPL17A UBI4 RPS0B RPS25B RPS29A RPL6B RPS17A YML025C RPS18B RPL6A RPL13B RPS16A RPL20A RPL16B RPS19B RPP2A RPS15 RPL25 RPS7A RPS10A RPL20B RPL5 RPL33A TEF1 RPL11A   59        359

cytoplasm         1.4988e-14      RPS6B RPS9B RPL31A RPL13A RPS16B RPL41B RPL35B RPL41A RPL35A RPL12B RPS18A RPL27B RPL37B RPL12A RPS24A RPL23B RPL30 RPL24A RPL28 RPS2 RPS26A RPL26B RPS23A RPS27B RPL42B RPS4B RPL2B RPL40A RPS21B RPL39 RPS22A RPS14B RPL14A RPL17A UBI4 PDC1 RPS0B RPS25B RPS29A RPL6B RPS17A RPS18B RPL6A RPL13B RPS16A RPL20A RPL16B RPS19B RPP2A RPS15 RPL25 RKI1 RPS7A RPS10A RPL20B RPL5 RPL33A TEF1 RPL11A       59        554

SUBCELLULAR LOCALISATION   4.69291e-13    POP5 PIM1 RPS6B RPS9B RPL31A RPL13A RPS16B RPL41B RPL35B RPL41A RPL35A RPL12B RPS18A RPL27B RPL37B GEA2 RPL12A RPS24A RPL23B RPL30 RPL24A RPL28 RPS2 RPS26A RPL26B RPS23A RPS27B HXT5 RPL42B CHS7 RPS4B RPL2B RPL40A MLP2 SIP4 DPB11 RPS21B RPL39 RPS22A RPS14B APS2 SFT1 RPL14A RPL17A UBI4 PDC1 RPS0B RPS25B RPS29A BDF1 VMA6 RPL6B RPS17A YML025C RPS18B RPL6A ERG5 RPL13B RPS16A RPL20A RPL16B RPS19B RPP2A RPS15 GPD2 RPL25 RKI1 RPS7A RPS10A RPL20B RPL5 RPL33A TEF1 RPL11A PRE2           75            2256

 

 

 

MIPS Phenotypes

Category          p-value In Category from Cluster          k          f

 

 

 

MIPS Subcellular Localization

Category          p-value In Category from Cluster          k          f

cytoplasm         1.14353e-14    RPS6B RPS9B RPL31A RPL13A RPS16B RPL41B RPL35B RPL41A RPL35A RPL12B RPS18A RPL27B RPL37B RPL12A RPS24A RPL23B RPL30 RPL24A RPL28 RPS2 RPS26A RPL26B RPS23A RPS27B RPL42B RPS4B RPL2B RPL40A RPS21B RPL39 RPS22A RPS14B RPL14A RPL17A UBI4 PDC1 RPS0B RPS25B RPS29A RPL6B RPS17A RPS18B RPL6A RPL13B RPS16A RPL20A RPL16B RPS19B RPP2A RPS15 RPL25 RKI1 RPS7A RPS10A RPL20B RPL5 RPL33A TEF1 RPL11A       59        593

 

 

 

MIPS Protein Complexes

Category          p-value In Category from Cluster          k          f

cytoplasmic ribosomal large subunit       1e-14   RPL31A RPL13A RPL41B RPL35B RPL41A RPL35A RPL12B RPL27B RPL37B RPL12A RPL23B RPL2A RPL30 RPL24A RPL28 RPL26B RPL42B RPL2B RPL40A RPL39 RPL14A RPL17A RPL6B RPL6A RPL13B RPL20A RPL16B RPP2A RPL25 RPL20B RPL5 RPL33A RPL11A    33            81

Cytoplasmic ribosomes 1e-14   RPS6B RPS9B RPL31A RPL13A RPS16B RPL41B RPL35B RPL41A RPL35A RPL12B RPS18A RPL27B RPL37B RPL12A RPS24A RPL23B RPL2A RPL30 RPL24A RPL28 RPS2 RPS26A RPL26B RPS23A RPS27B RPL42B RPS4B RPL2B RPL40A RPS21B RPL39 RPS22A RPS14B RPL14A RPL17A RPS0B RPS25B RPS29A RPL6B RPS17A RPS18B RPL6A RPL13B RPS16A RPL20A RPL16B RPS19B RPP2A RPS15 RPL25 RPS7A RPS10A RPL20B RPL5 RPL33A RPL11A    56        138

cytoplasmic ribosomal small subunit       1e-14   RPS6B RPS9B RPS16B RPS18A RPS24A RPS2 RPS26A RPS23A RPS27B RPS4B RPS21B RPS22A RPS14B RPS0B RPS25B RPS29A RPS17A RPS18B RPS16A RPS19B RPS15 RPS7A RPS10A          23        57

Translation complexes   1e-14   RPS6B RPS9B RPL31A RPL13A RPS16B RPL41B RPL35B RPL41A RPL35A RPL12B RPS18A RPL27B RPL37B RPL12A RPS24A RPL23B RPL2A RPL30 RPL24A RPL28 RPS2 RPS26A RPL26B RPS23A RPS27B RPL42B RPS4B RPL2B RPL40A RPS21B RPL39 RPS22A RPS14B RPL14A RPL17A RPS0B RPS25B RPS29A RPL6B RPS17A RPS18B RPL6A RPL13B RPS16A RPL20A RPL16B RPS19B RPP2A RPS15 RPL25 RPS7A RPS10A RPL20B RPL5 RPL33A TEF1 RPL11A      57        240

 

 

 

MIPS Protein Classes

Category          p-value In Category from Cluster          k          f

 

 

 

GO Molecular Function

Category          p-value In Category from Cluster          k          f

structural constituent of ribosome [GO:0003735]          1e-14   RPS6B RPS9B RPL31A RPL13A RPS16B RPL41B RPL35B RPL41A RPL35A RPL12B RPS18A RPL27B RPL37B RPL12A RPS24A RPL23B RPL2A RPL30 RPL24A RPL28 RPS2 RPS26A RPL26B RPS23A RPS27B RPL42B RPS4B RPL2B RPL40A RPS21B RPL39 RPS22A RPS14B RPL14A RPL17A RPS0B RPS25B RPS29A RPL6B RPS17A YML025C RPS18B RPL6A RPL13B RPS16A RPL20A RPL16B RPS19B RPP2A RPS15 RPL25 RPS7A RPS10A RPL20B RPL5 RPL33A RPL11A       57        206

structural molecule [GO:0005198]        1e-14   RPS6B RPS9B RPL31A RPL13A RPS16B RPL41B RPL35B RPL41A RPL35A RPL12B RPS18A RPL27B RPL37B RPL12A RPS24A RPL23B RPL2A RPL30 RPL24A RPL28 RPS2 RPS26A RPL26B RPS23A RPS27B RPL42B RPS4B RPL2B RPL40A RPS21B RPL39 RPS22A RPS14B RPL14A RPL17A RPS0B RPS25B RPS29A RPL6B RPS17A YML025C RPS18B RPL6A RPL13B RPS16A RPL20A RPL16B RPS19B RPP2A RPS15 RPL25 RPS7A RPS10A RPL20B RPL5 RPL33A RPL11A            57        310

 

 

 

GO Biological Process

Category          p-value In Category from Cluster          k          f

macromolecule biosynthesis [GO:0009059]      1e-14   RPS6B RPS9B RPL31A RPL13A RPS16B RPL41B RPL35B RPL41A PPH22 RPL35A RPL12B RPS18A RPL27B RPL37B RPL12A RPS24A RPL23B RPL2A RPL30 RPL24A RPL28 RPS2 RPS26A RPL26B RPS23A RPS27B RPL42B CHS7 RPS4B RPL2B RPL40A RPS21B RPL39 RPS22A RPS14B RPL14A RPL17A RPS0B RPS25B RPS29A RPL6B RPS17A YML025C RPS18B RPL6A RPL13B RPS16A RPL20A RPL16B RPS19B RPP2A RPS15 RPL25 RPS7A RPS10A RPL20B RPL5 RPL33A TEF1 RPL11A         60            422

protein biosynthesis [GO:0006412]       1e-14   RPS6B RPS9B RPL31A RPL13A RPS16B RPL41B RPL35B RPL41A PPH22 RPL35A RPL12B RPS18A RPL27B RPL37B RPL12A RPS24A RPL23B RPL2A RPL30 RPL24A RPL28 RPS2 RPS26A RPL26B RPS23A RPS27B RPL42B RPS4B RPL2B RPL40A RPS21B RPL39 RPS22A RPS14B RPL14A RPL17A RPS0B RPS25B RPS29A RPL6B RPS17A YML025C RPS18B RPL6A RPL13B RPS16A RPL20A RPL16B RPS19B RPP2A RPS15 RPL25 RPS7A RPS10A RPL20B RPL5 RPL33A TEF1 RPL11A            59        415

biosynthesis [GO:0009058]      1e-14   RPS6B RPS9B RPL31A RPL13A RPS16B RPL41B RPL35B RPL41A PPH22 RPL35A RPL12B RPS18A RPL27B RPL37B RPL12A RPS24A RPL23B RPL2A RPL30 RPL24A RPL28 RPS2 RPS26A RPL26B RPS23A RPS27B RPL42B CHS7 RPS4B RPL2B RPL40A SIP4 LCB3 RPS21B RPL39 RPS22A RPS14B RPL14A RPL17A RPS0B RPS25B RPS29A RPL6B RPS17A YML025C RPS18B RPL6A ERG5 RPL13B RPS16A RPL20A RPL16B RPS19B RPP2A RPS15 RPL25 RPS7A RPS10A RPL20B RPL5 RPL33A TEF1 RPL11A             63        731

protein metabolism [GO:0019538]        1e-14   PIM1 RPS6B RPS9B RPL31A RPL13A RPS16B RPL41B RPL35B RPL41A PPH22 RPL35A RPL12B RPS18A RPL27B RPL37B GEA2 RPL12A RPS24A RPL23B RPL2A RPL30 RPL24A RPL28 VPS73 RPS2 MON1 RPS26A RPL26B RPS23A RPS27B RPL42B CHS7 RPS4B MNL1 RPL2B RPL40A MLP2 RPS21B RPL39 RPS22A RPS14B SFT1 RPL14A RPL17A UBI4 RPS0B RPS25B RPS29A RPL6B RPS17A YML025C RPS18B RPL6A RPL13B RPS16A RPL20A RPL16B RPS19B RPP2A RPS15 RPL25 YGK3 RPS7A RPS10A RPL20B RPL5 RPL33A TEF1 RPL11A PRE2        70        1168

metabolism [GO:0008152]       8.00249e-13    POP5 PIM1 RPS6B NTC20 RPS9B RPL31A RPL13A RPS16B RPL41B RPL35B RPL41A PPH22 RPL35A RPL12B UTP6 RPS18A RPL27B RPL37B GEA2 RPL12A RPS24A SLX8 RPL23B RPL2A RPL30 RPL24A RPL28 VPS73 RPS2 MON1 RPS26A RPL26B RPS23A RPS27B RPL42B CHS7 RPS4B MNL1 RPL2B RPL40A MLP2 SIP4 DPB11 LCB3 RPS21B RPL39 RPS22A RPS14B SFT1 RPL14A RPL17A UBI4 PDC1 RPS0B RPS25B RPS29A RPL6B RPS17A YML025C RPS18B RPL6A ERG5 RPL13B RPS16A RPL20A RPL16B RPS19B RPP2A RPS15 GPD2 RPL25 YGK3 PFK27 RKI1 RPS7A RPS10A RPL20B RPL5 RPL33A TEF1 RPL11A PRE2 82        2693

ribosomal subunit assembly [GO:0042257]       2.84875e-10    RPL12B RPL12A RPS14B RPS0B RPL6B RPS17A YML025C RPL6A RPL25 RPL5 RPL11A     11        48

ribosome assembly [GO:0042255]       4.57769e-10    RPL12B RPL12A RPS14B RPS0B RPL6B RPS17A YML025C RPL6A RPL25 RPL5 RPL11A            11        50

cell growth and/or maintenance [GO:0008151] 7.29423e-09    POP5 PIM1 RPS6B NTC20 RPS9B RPL31A RPL13A RPS16B RPL41B RPL35B RPL41A PPH22 RPL35A RPL12B UTP6 RPS18A UGO1 RPL27B RPL37B GEA2 RPL12A RPS24A SLX8 RPL23B RPL2A RPL30 RPL24A RPL28 VPS73 RPS2 MON1 RPS26A RPL26B RPS23A RPS27B ECM12 HXT5 RPL42B CHS7 RPS4B MNL1 RPL2B RPL40A MLP2 SIP4 DPB11 LCB3 RPS21B RPL39 RPS22A RPS14B APS2 PTK2 SFT1 RPL14A RPL17A UBI4 PDC1 RPS0B RPS25B RPS29A BDF1 VMA6 RPL6B RPS17A YML025C RPS18B RPL6A ERG5 RPL13B RPS16A RPL20A RPL16B RPS19B RPP2A RPS15 GPD2 MAM3 RPL25 YGK3 PFK27 RKI1 RPS7A RPS10A RPL20B RPL5 RPL33A TEF1 RPL11A PRE2         90            3657

ribosomal large subunit assembly and maintenance [GO:0000027]         8.91076e-08    RPL12B RPL12A RPL6B YML025C RPL6A RPL25 RPL5 RPL11A     8          35

ribosome biogenesis and assembly [GO:0042254]        6.43627e-07    POP5 RPL12B UTP6 RPL12A RPL30 RPS14B RPS0B RPL6B RPS17A YML025C RPL6A RPL25 RPL5 RPL11A 14        165

 

 

 

GO Cellular Component

Category          p-value In Category from Cluster          k          f

cytosolic large ribosomal subunit (sensu Eukarya) [GO:0005842]          1e-14   RPL31A RPL13A RPL41B RPL35B RPL41A RPL35A RPL12B RPL27B RPL37B RPL12A RPL23B RPL2A RPL30 RPL24A RPL28 RPL26B RPL42B RPL2B RPL40A RPL39 RPL14A RPL17A RPL6B RPL6A RPL13B RPL20A RPL16B RPP2A RPL25 RPL20B RPL5 RPL33A RPL11A        33        83

cytosolic small ribosomal subunit (sensu Eukarya) [GO:0005843]          1e-14   RPS6B RPS9B RPS16B RPS18A RPS24A RPS2 RPS26A RPS23A RPS27B RPS4B RPS21B RPS22A RPS14B RPS0B RPS25B RPS29A RPS17A RPS18B RPS16A RPS19B RPS15 RPS7A RPS10A 23        61

eukaryotic 48S initiation complex [GO:0016283]          1e-14   RPS6B RPS9B RPS16B RPS18A RPS24A RPS2 RPS26A RPS23A RPS27B RPS4B RPS21B RPS22A RPS14B RPS0B RPS25B RPS29A RPS17A RPS18B RPS16A RPS19B RPS15 RPS7A RPS10A       23        61

cytosolic ribosome (sensu Eukarya) [GO:0005830]       1e-14   RPS6B RPS9B RPL31A RPL13A RPS16B RPL41B RPL35B RPL41A RPL35A RPL12B RPS18A RPL27B RPL37B RPL12A RPS24A RPL23B RPL2A RPL30 RPL24A RPL28 RPS2 RPS26A RPL26B RPS23A RPS27B RPL42B RPS4B RPL2B RPL40A RPS21B RPL39 RPS22A RPS14B RPL14A RPL17A RPS0B RPS25B RPS29A RPL6B RPS17A RPS18B RPL6A RPL13B RPS16A RPL20A RPL16B RPS19B RPP2A RPS15 RPL25 RPS7A RPS10A RPL20B RPL5 RPL33A RPL11A          56        151

eukaryotic 43S pre-initiation complex [GO:0016282]    1e-14   RPS6B RPS9B RPS16B RPS18A RPS24A RPS2 RPS26A RPS23A RPS27B RPS4B RPS21B RPS22A RPS14B RPS0B RPS25B RPS29A RPS17A RPS18B RPS16A RPS19B RPS15 RPS7A RPS10A       23        67

large ribosomal subunit [GO:0015934]  1e-14   RPL31A RPL13A RPL41B RPL35B RPL41A RPL35A RPL12B RPL27B RPL37B RPL12A RPL23B RPL2A RPL30 RPL24A RPL28 RPL26B RPL42B RPL2B RPL40A RPL39 RPL14A RPL17A RPL6B YML025C RPL6A RPL13B RPL20A RPL16B RPP2A RPL25 RPL20B RPL5 RPL33A RPL11A          34        122

small ribosomal subunit [GO:0015935] 1e-14   RPS6B RPS9B RPS16B RPS18A RPS24A RPS2 RPS26A RPS23A RPS27B RPS4B RPS21B RPS22A RPS14B RPS0B RPS25B RPS29A RPS17A RPS18B RPS16A RPS19B RPS15 RPS7A RPS10A          23        88

ribosome [GO:0005840]          1e-14   RPS6B RPS9B RPL31A RPL13A RPS16B RPL41B RPL35B RPL41A RPL35A RPL12B RPS18A RPL27B RPL37B RPL12A RPS24A RPL23B RPL2A RPL30 RPL24A RPL28 RPS2 RPS26A RPL26B RPS23A RPS27B RPL42B RPS4B RPL2B RPL40A RPS21B RPL39 RPS22A RPS14B RPL14A RPL17A RPS0B RPS25B RPS29A RPL6B RPS17A YML025C RPS18B RPL6A RPL13B RPS16A RPL20A RPL16B RPS19B RPP2A RPS15 RPL25 RPS7A RPS10A RPL20B RPL5 RPL33A TEF1 RPL11A     58        258

cytosol [GO:0005829] 1e-14   RPS6B RPS9B RPL31A RPL13A RPS16B RPL41B RPL35B RPL41A RPL35A RPL12B RPS18A RPL27B RPL37B RPL12A RPS24A RPL23B RPL2A RPL30 RPL24A RPL28 RPS2 RPS26A RPL26B RPS23A RPS27B RPL42B RPS4B RPL2B RPL40A RPS21B RPL39 RPS22A RPS14B RPL14A RPL17A RPS0B RPS25B RPS29A RPL6B RPS17A RPS18B RPL6A RPL13B RPS16A RPL20A RPL16B RPS19B RPP2A RPS15 GPD2 RPL25 RPS7A RPS10A RPL20B RPL5 RPL33A RPL11A PRE2       58        310

ribonucleoprotein complex [GO:0030529]        1e-14   POP5 RPS6B NTC20 RPS9B RPL31A RPL13A RPS16B RPL41B RPL35B RPL41A RPL35A RPL12B UTP6 RPS18A RPL27B RPL37B RPL12A RPS24A RPL23B RPL2A RPL30 RPL24A RPL28 RPS2 RPS26A RPL26B RPS23A RPS27B RPL42B RPS4B RPL2B RPL40A RPS21B RPL39 RPS22A RPS14B RPL14A RPL17A RPS0B RPS25B RPS29A RPL6B RPS17A YML025C RPS18B RPL6A RPL13B RPS16A RPL20A RPL16B RPS19B RPP2A RPS15 RPL25 RPS7A RPS10A RPL20B RPL5 RPL33A TEF1 RPL11A             61        380

cytoplasm [GO:0005737]         1e-14   PIM1 RPS6B RPS9B RPL31A RPL13A RPS16B RPL41B RPL35B RPL41A RPL35A RPL12B RPS18A UGO1 RPL27B RPL37B GEA2 RPL12A RPS24A RPL23B RPL2A RPL30 RPL24A RPL28 RPS2 RPS26A RPL26B RPS23A RPS27B YHR033W RPL42B CHS7 RPS4B MNL1 RPL2B RPL40A LCB3 RPS21B RPL39 RPS22A RPS14B APS2 SFT1 RPL14A RPL17A UBI4 RPS0B RPS25B RPS29A VMA6 RPL6B RPS17A YML025C RPS18B RPL6A ERG5 RPL13B RPS16A RPL20A RPL16B RPS19B RPP2A RPS15 GPD2 RPL25 PFK27 RPS7A RPS10A RPL20B RPL5 RPL33A TEF1 RPL11A PRE2       73        1810

intracellular [GO:0005622]       1.60858e-10    POP5 PIM1 RPS6B NTC20 RPS9B RPL31A RPL13A RPS16B RPL41B RPL35B RPL41A RPL35A RPL12B UTP6 RPS18A UGO1 RPL27B RPL37B GEA2 RPL12A RPS24A SLX8 RPL23B RPL2A RPL30 RPL24A RPL28 RPS2 RPS26A RPL26B RPS23A RPS27B YHR033W HXT5 RPL42B CHS7 RPS4B MNL1 RPL2B RPL40A MLP2 SIP4 DPB11 LCB3 RPS21B RPL39 RPS22A RPS14B APS2 SFT1 RPL14A RPL17A UBI4 RPS0B RPS25B RPS29A BDF1 VMA6 RPL6B RPS17A YML025C RPS18B RPL6A ERG5 RPL13B RPS16A RPL20A RPL16B RPS19B RPP2A RPS15 GPD2 RPL25 PFK27 RPS7A RPS10A RPL20B RPL5 RPL33A TEF1 RPL11A PRE2 82        2921

cell [GO:0005623]       6.64659e-09    POP5 PIM1 RPS6B NTC20 RPS9B RPL31A RPL13A RPS16B RPL41B RPL35B RPL41A RPL35A RPL12B UTP6 RPS18A UGO1 RPL27B RPL37B GEA2 RPL12A RPS24A SLX8 RPL23B RPL2A RPL30 RPL24A RPL28 RPS2 RPS26A RPL26B RPS23A RPS27B YHR033W HXT5 RPL42B CHS7 RPS4B MNL1 RPL2B RPL40A MLP2 SIP4 DPB11 LCB3 RPS21B RPL39 RPS22A RPS14B APS2 SFT1 RPL14A RPL17A UBI4 RPS0B RPS25B RPS29A BDF1 VMA6 RPL6B RPS17A YML025C RPS18B RPL6A ERG5 RPL13B RPS16A RPL20A RPL16B RPS19B RPP2A RPS15 GPD2 RPL25 PFK27 RPS7A RPS10A RPL20B RPL5 RPL33A TEF1 RPL11A PRE2            82        3106

 

 

 

SMART Domains

Category          p-value In Category from Cluster          k          f

 

 

 

PFam-A Domains

Category          p-value In Category from Cluster          k          f

PF00467 (KOW)        3.5789e-05      RPL27B RPL26B RPS4B RPL14A     4          12

 

 

 

Yeast Two Hybrid - Uetz

Category          p-value In Category from Cluster          k          f

 

 

 

Yeast Two Hybrid - Ito (core)

Category          p-value In Category from Cluster          k          f

 

 

 

Yeast Two Hybrid - Ito (full)

Category          p-value In Category from Cluster          k          f

 

 

 

Synthetic Genetic Array Analysis

Category          p-value In Category from Cluster          k          f

 

 

 

MDS Proteomics Complexes

Category          p-value In Category from Cluster          k          f

 

 

 

Cellzome Complexes

Category          p-value In Category from Cluster          k          f

YBR031W (RPL4A)   1e-14   RPL13A RPL12B RPL27B RPL28 RPL2B RPS14B RPL17A RPL6A RPL13B RPL20A RPL16B RPL25 RPL20B RPL33A     14        39

 

 

 

Proteome Localization--Observed

Category          p-value In Category from Cluster          k          f

 

 

 

Proteome Localization--Predicted+Observed

Category          p-value In Category from Cluster          k          f

cyt        3.98621e-09    FUN19 RPS6B RPS9B RPL31A RXT3 RPL13A RPS16B YDL133W RPL35B RPL41A YDL186W PPH22 RPL35A RPL12B UTP6 RPS18A UGO1 RPL27B RPL37B GEA2 YEL023C RPL12A RPS24A SLX8 RPL23B RPL30 RPL24A RPL28 RPS2 MON1 RPS26A YGR033C RPL26B YGR117C RPS23A RPS27B YHR033W HXT5 RPL42B CHS7 RPS4B MNL1 RPL2B RPL40A SIP4 RPS21B RPL39 RPS22A RPS14B RPL14A RPL17A UBI4 PDC1 RPS0B RPS25B YLR387C RPS29A VMA6 RPL6B RPS17A RPS18B RPL6A RPL13B RPS16A RPL20A RPL16B RPS19B RPP2A RPS15 YOL109W RPL25 YGK3 PFK27 RKI1 RPS7A YOR292C RPS10A RPL20B SCP1 RPL5 RPL33A TEF1 RPL11A PRE2          84        3210

 

 

 

Deletions Consortium (Essentiality, Morphology)

Category          p-value In Category from Cluster          k          f

 

 

 

Yeast Fitness Data

Category          p-value In Category from Cluster          k          f

Slow Growers  8.6875e-07      RPS6B RPS9B RPL31A RPL35A RPL12B RPS18A RPS24A SLX8 RPL23B RPS23A RPS27B RPS4B RPS21B RPL39 RPL14A PDC1 YLR047C BDF1 VMA6 RPL6B RPS17A RPL6A RPL13B RPS16A RPL16B RPS19B RPS7A RPS10A     28        617

 

 

 

Published Complexes

Category          p-value In Category from Cluster          k          f

Andersen et al. (2002) - Curr Bio 12:1-            1.40157e-08    RPS6B RPS9B RPL31A RPL12B RPL27B RPL28 RPL26B RPL2B RPL17A UBI4 RPL6B RPS18B RPL13B RPS16A RPL25 RPL5    16        165

Harnicharnpai et al. (2001) - Mol Cell 8:505-   0.00251154     RPS2 RPS22A RPS15 RPL5 4          34

 

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Rap1-PBMandLeeChIP-exact.FunSpec.txt

 Input Cluster (n=11)

YBR188C        NTC20

YBR189W       RPS9B

YDL136W       RPL35B

YDR500C       RPL37B

YDR501W      PLM2

YGL030W       RPL30

YGL031C        RPL24A

YOL059W      GPD2

YOL060C       MAM3

YOR338W

YPR080W       TEF1

 

Genes Not Found:

 

MIPS Functional Classification

Category          p-value In Category from Cluster          k          f

PROTEIN SYNTHESIS          1.22545e-05    RPS9B RPL35B RPL37B RPL30 RPL24A TEF1       6          359

ribosome biogenesis      1.77075e-05    RPS9B RPL35B RPL37B RPL30 RPL24A     5          215

cytoplasm         0.000145813   RPS9B RPL35B RPL37B RPL30 RPL24A TEF1       6          554

 

 

 

MIPS Phenotypes

Category          p-value In Category from Cluster          k          f

 

 

 

MIPS Subcellular Localization

Category          p-value In Category from Cluster          k          f

cytoplasm         0.000213485   RPS9B RPL35B RPL37B RPL30 RPL24A TEF1       6          593

 

 

 

MIPS Protein Complexes

Category          p-value In Category from Cluster          k          f

Translation complexes   1.16578e-06    RPS9B RPL35B RPL37B RPL30 RPL24A TEF1       6          240

Cytoplasmic ribosomes 2.00044e-06    RPS9B RPL35B RPL37B RPL30 RPL24A     5          138

cytoplasmic ribosomal large subunit       7.9793e-06      RPL35B RPL37B RPL30 RPL24A     4          81

 

 

 

MIPS Protein Classes

Category          p-value In Category from Cluster          k          f

 

 

 

GO Molecular Function

Category          p-value In Category from Cluster          k          f

structural constituent of ribosome [GO:0003735]          1.43748e-05    RPS9B RPL35B RPL37B RPL30 RPL24A     5            206

 

 

 

GO Biological Process

Category          p-value In Category from Cluster          k          f

protein biosynthesis [GO:0006412]       2.82493e-05    RPS9B RPL35B RPL37B RPL30 RPL24A TEF1       6          415

macromolecule biosynthesis [GO:0009059]      3.1093e-05      RPS9B RPL35B RPL37B RPL30 RPL24A TEF1       6            422

 

 

 

GO Cellular Component

Category          p-value In Category from Cluster          k          f

ribonucleoprotein complex [GO:0030529]        7.62057e-07    NTC20 RPS9B RPL35B RPL37B RPL30 RPL24A TEF1             7          380

ribosome [GO:0005840]          1.7843e-06      RPS9B RPL35B RPL37B RPL30 RPL24A TEF1       6          258

cytosolic ribosome (sensu Eukarya) [GO:0005830]       3.12464e-06    RPS9B RPL35B RPL37B RPL30 RPL24A     5            151

cytosol [GO:0005829] 5.22628e-06    RPS9B RPL35B RPL37B RPL30 RPL24A GPD2      6          310

cytosolic large ribosomal subunit (sensu Eukarya) [GO:0005842]          8.79736e-06    RPL35B RPL37B RPL30 RPL24A             4          83

large ribosomal subunit [GO:0015934]  4.05943e-05    RPL35B RPL37B RPL30 RPL24A     4          122

 

 

 

SMART Domains

Category          p-value In Category from Cluster          k          f

 

 

 

PFam-A Domains

Category          p-value In Category from Cluster          k          f

 

 

 

Yeast Two Hybrid - Uetz

Category          p-value In Category from Cluster          k          f

 

 

 

Yeast Two Hybrid - Ito (core)

Category          p-value In Category from Cluster          k          f

 

 

 

Yeast Two Hybrid - Ito (full)

Category          p-value In Category from Cluster          k          f

 

 

 

Synthetic Genetic Array Analysis

Category          p-value In Category from Cluster          k          f

 

 

 

MDS Proteomics Complexes

Category          p-value In Category from Cluster          k          f

 

 

 

Cellzome Complexes

Category          p-value In Category from Cluster          k          f

 

 

 

Proteome Localization--Observed

Category          p-value In Category from Cluster          k          f

 

 

 

Proteome Localization--Predicted+Observed

Category          p-value In Category from Cluster          k          f

 

 

 

Deletions Consortium (Essentiality, Morphology)

Category          p-value In Category from Cluster          k          f

 

 

 

Yeast Fitness Data

Category          p-value In Category from Cluster          k          f

 

 

 

Published Complexes

Category          p-value In Category from Cluster          k          f

 

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Rap1-PBMandnotLeeChIP-alldata.FunSpec.txt

 Input Cluster (n=263)

YBL029C-A

YBL029W

YBL049W

YBL060W

YBL061C        SKT5

YBL069W       AST1

YBL071W-A   KTI11

YBL072C        RPS8A

YBR052C

YBR060C        ORC2

YBR117C        TKL2

YBR118W       TEF2

YBR149W       ARA1

YBR179C        FZO1

YBR180W       DTR1

YBR196C        PGI1

YBR204C

YBR205W       KTR3

YBR295W       PCA1

YCL024W       KCC4

YCL025C        AGP1

YCL030C        HIS4

YCL036W       GFD2

YCL037C        SRO9

YDL022W       GPD1

YDL055C        PSA1

YDL060W       TSR1

YDL061C        RPS29B

YDL130W       RPP1B

YDL168W       SFA1

YDL169C        UGX2

YDL229W       SSB1

YDL235C        YPD1

YDR050C       TPI1

YDR070C

YDR079C-A

YDR080W      VPS41

YDR109C

YDR110W      FOB1

YDR119W

YDR249C

YDR251W      PAM1

YDR258C       HSP78

YDR264C       AKR1

YDR265W      PEX10

YDR275W

YDR276C       PMP3

YDR300C       PRO1

YDR301W      CFT1

YDR324C       UTP4

YDR325W      YCG1

YDR393W      SHE9

YDR408C       ADE8

YDR409W      SIZ1

YDR447C       RPS17B

YDR448W      ADA2

YEL007W

YEL009C        GCN4

YEL020W-A   TIM9

YER033C        ZRG8

YER034W

YER045C        ACA1

YER046W       SPO73

YER047C        SAP1

YER056C-A    RPL34A

YER066W

YER101C        AST2

YER102W       RPS8B

YER130C

YER131W       RPS26B

YER158C

YER168C        CCA1

YER169W       RPH1

YFL023W       BUD27

YFL024C        EPL1

YFL051C

YFR032C

YFR032C-A    RPL29

YGL071W       RCS1

YGL073W       HSF1

YGL075C        MPS2

YGL083W       SCY1

YGL084C        GUP1

YGL115W       SNF4

YGL135W       RPL1B

YGL136C        MRM2

YGL147C        RPL9A

YGL258W       VEL1

YGR027C       RPS25A

YGR032W      GSC2

YGR052W

YGR085C       RPL11B

YGR180C       RNR4

YGR192C       TDH3

YGR213C       RTA1

YGR214W      RPS0A

YGR233C       PHO81

YGR234W      YHB1

YHL001W       RPL14B

YHL033C        RPL8A

YHL036W       MUP3

YHL038C        CBP2

YHR122W

YHR193C       EGD2

YHR194W      MDM31

YIL001W

YIL002C         INP51

YJL049W

YJL062W        LAS21

YJL062W-A

YJL063C         MRPL8

YJL076W        NET1

YJL077C         ICS3

YJL091C

YJL148W        RPA34

YJR073C         OPI3

YJR074W        MOG1

YJR083C

YJR084W        CSN12

YJR123W        RPS5

YJR134C         SGM1

YJR139C         HOM6

YJR145C         RPS4A

YJR147W        HMS2

YKL009W      MRT4

YKL010C       UFD4

YKL015W      PUT3

YKL016C       ATP7

YKL019W      RAM2

YKL020C       SPT23

YKL033W

YKL081W      TEF4

YKL082C

YKL096W      CWP1

YKL150W      MCR1

YKL151C

YKL156W      RPS27A

YKL175W      ZRT3

YKL176C       LST4

YKL178C       STE3

YKL182W      FAS1

YKR057W      RPS21A

YKR092C       SRP40

YKR093W      PTR2

YKR094C       RPL40B

YKR095W      MLP1

YKR102W      FLO10

YLL051C        FRE6

YLR003C

YLR004C

YLR005W       SSL1

YLR023C

YLR061W       RPL22A

YLR074C        BUD20

YLR075W       RPL10

YLR103C        CDC45

YLR104W

YLR166C        SEC10

YLR167W       RPS31

YLR208W       SEC13

YLR213C        CRR1

YLR214W       FRE1

YLR249W       YEF3

YLR254C

YLR256W       HAP1

YLR286C        CTS1

YLR312C

YLR312W-A   MRPL15

YLR325C        RPL38

YLR326W

YLR390W-A   CCW14

YLR406C        RPL31B

YLR407W

YLR413W

YLR437C

YLR438W       CAR2

YLR441C        RPS1A

YLR452C        SST2

YML010W      SPT5

YML011C

YMR013C       SEC59

YMR013W-A

YMR014W      BUD22

YMR026C       PEX12

YMR027W      HRT2

YMR087W

YMR092C       AIP1

YMR093W      UTP15

YMR095C       SNO1

YMR096W      SNZ1

YMR116C       ASC1

YMR127C       SAS2

YMR128W      ECM16

YMR144W

YMR194W      RPL36A

YMR205C       PFK2

YMR206W

YMR229C       RRP5

YMR230W      RPS10B

YMR231W      PEP5

YMR243C       ZRC1

YMR244W

YMR251W

YMR265C

YMR266W      RSN1

YNL010W

YNL011C

YNL067W      RPL9B

YNL068C       FKH2

YNL101W

YNL154C       YCK2

YNL186W      UBP10

YNL216W      RAP1

YNL253W

YNL254C

YNL288W      CAF40

YNR069C

YNR070W      PDR18

YOL103W      ITR2

YOL120C       RPL18A

YOL121C       RPS19A

YOL161C

YOR032C       HMS1

YOR043W      WHI2

YOR056C       NOB1

YOR057W      SGT1

YOR093C

YOR094W      ARF3

YOR103C       OST2

YOR104W      PIN2

YOR113W      AZF1

YOR124C       UBP2

YOR161C

YOR267C       HRK1

YOR269W      PAC1

YOR340C       RPA43

YOR341W      RPA190

YOR354C       MSC6

YOR355W      GDS1

YOR359W      VTS1

YOR369C       RPS12

YPL036W       PMA2

YPL037C        EGD1

YPL054W       LEE1

YPL055C        LGE1

YPL075W       GCR1

YPL081W       RPS9A

YPL082C        MOT1

YPL090C        RPS6A

YPL162C

YPL198W       RPL7B

YPL199C

YPL220W       RPL1A

YPL229W

YPR042C        PUF2

YPR043W       RPL43A

YPR057W       BRR1

YPR105C        COG4

YPR106W       ISR1

YPR110C        RPC40

YPR111W       DBF20

YPR135W       CTF4

YPR161C        SGV1

 

Genes Not Found:

 

LSR1

SNR128

SNR190

SNR38

SNR40

SNR62

SNR72

SNR73

SNR74

SNR75

SNR76

SNR77

SNR78

TK%28UUU%29D

TS%28UGA%29E

YBL071C-B

YBR196C-A

YBR196C-B

YFR032C-B

YGR027W-A

YGR027W-B

YLR264C-A

YLR406C-A

YLR412C-A

YMR230W-A

YNL067W-B

YOR032W-A

YOR161C-C

MIPS Functional Classification

Category          p-value In Category from Cluster          k          f

ribosome biogenesis      1e-14   RPS8A RPS29B RPP1B RPS17B RPL34A RPS8B RPS26B RPL29 RPL1B RPL9A RPS25A RPL11B RPS0A RPL14B RPL8A MRPL8 RPS5 RPS4A MRT4 RPS27A RPS21A RPL40B RPL22A RPL10 RPS31 MRPL15 RPL38 RPL31B RPS1A ASC1 RPL36A RPS10B RPL9B RPL18A RPS19A RPS12 RPS9A RPS6A RPL7B RPL1A RPL43A         41        215

PROTEIN SYNTHESIS          9.39582e-13    RPS8A TEF2 RPS29B RPP1B SSB1 RPS17B RPL34A RPS8B RPS26B RPL29 RPL1B RPL9A RPS25A RPL11B RPS0A RPL14B RPL8A MRPL8 RPS5 RPS4A MRT4 TEF4 RPS27A RPS21A RPL40B SSL1 RPL22A RPL10 RPS31 YEF3 MRPL15 RPL38 RPL31B RPS1A ASC1 RPL36A RPS10B RPL9B RAP1 RPL18A RPS19A RPS12 RPS9A RPS6A RPL7B RPL1A RPL43A   47        359

cytoplasm         6.42519e-12    RPS8A TKL2 TEF2 PGI1 GPD1 RPS29B RPP1B SSB1 TPI1 FOB1 PRO1 ADE8 RPS17B RPL34A RPS8B RPS26B CCA1 RPL29 RPL1B RPL9A RPS25A RPL11B TDH3 RPS0A YHB1 RPL14B RPL8A EGD2 RPS5 RPS4A UFD4 RAM2 TEF4 RPS27A FAS1 RPS21A RPL40B RPL10 SEC10 RPS31 YEF3 RPL38 RPL31B CAR2 RPS1A ASC1 RPL36A PFK2 RPS10B RPL9B RPL18A RPS19A UBP2 RPS12 RPS9A RPS6A RPL7B RPL1A RPL43A        59        554

SUBCELLULAR LOCALISATION   5.83226e-05    RPS8A ORC2 TKL2 TEF2 FZO1 PGI1 YBR204C KCC4 AGP1 GPD1 RPS29B RPP1B SSB1 TPI1 VPS41 FOB1 HSP78 PEX10 PRO1 CFT1 ADE8 RPS17B ADA2 GCN4 TIM9 SAP1 RPL34A RPS8B RPS26B CCA1 YFL051C RPL29 RCS1 HSF1 MPS2 SNF4 RPL1B RPL9A RPS25A GSC2 RPL11B RNR4 TDH3 RPS0A YHB1 RPL14B RPL8A MUP3 CBP2 EGD2 LAS21 MRPL8 RPA34 OPI3 RPS5 RPS4A UFD4 PUT3 ATP7 RAM2 SPT23 TEF4 CWP1 MCR1 RPS27A STE3 FAS1 RPS21A SRP40 PTR2 RPL40B MLP1 FLO10 RPL10 CDC45 SEC10 RPS31 SEC13 FRE1 YEF3 HAP1 CTS1 MRPL15 RPL38 RPL31B CAR2 RPS1A SST2 SPT5 SEC59 PEX12 AIP1 ASC1 ECM16 RPL36A PFK2 RRP5 RPS10B PEP5 ZRC1 RPL9B FKH2 YCK2 RAP1 ITR2 RPL18A RPS19A OST2 AZF1 UBP2 RPA43 RPA190 RPS12 PMA2 EGD1 GCR1 RPS9A MOT1 RPS6A RPL7B RPL1A RPL43A BRR1 RPC40 CTF4           125      2256

 

 

 

MIPS Phenotypes

Category          p-value In Category from Cluster          k          f

 

 

 

MIPS Subcellular Localization

Category          p-value In Category from Cluster          k          f

cytoplasm         3.65863e-12    RPS8A TKL2 TEF2 PGI1 SRO9 GPD1 RPS29B RPP1B SSB1 TPI1 FOB1 PRO1 ADE8 RPS17B RPL34A RPS8B RPS26B CCA1 RPL29 RPL1B RPL9A RPS25A RPL11B TDH3 RPS0A YHB1 RPL14B RPL8A EGD2 RPS5 RPS4A UFD4 RAM2 TEF4 RPS27A FAS1 RPS21A RPL40B RPL22A RPL10 SEC10 RPS31 YEF3 RPL38 RPL31B CAR2 RPS1A ASC1 RPL36A PFK2 RPS10B RPL9B RPL18A RPS19A UBP2 RPS12 EGD1 RPS9A RPS6A RPL7B RPL1A RPL43A         62        593

 

 

 

MIPS Protein Complexes

Category          p-value In Category from Cluster          k          f

Cytoplasmic ribosomes 1e-14   RPS8A RPS29B RPP1B RPS17B RPL34A RPS8B RPS26B RPL29 RPL1B RPL9A RPS25A RPL11B RPS0A RPL14B RPL8A RPS5 RPS4A RPS27A RPS21A RPL40B RPL22A RPL10 RPS31 RPL38 RPL31B RPS1A ASC1 RPL36A RPS10B RPL9B RPL18A RPS19A RPS12 RPS9A RPS6A RPL7B RPL1A RPL43A             38        138

Translation complexes   1e-14   RPS8A TEF2 RPS29B RPP1B RPS17B RPL34A RPS8B RPS26B RPL29 RPL1B RPL9A RPS25A RPL11B RPS0A RPL14B RPL8A MRPL8 RPS5 RPS4A TEF4 RPS27A RPS21A RPL40B RPL22A RPL10 RPS31 YEF3 MRPL15 RPL38 RPL31B RPS1A ASC1 RPL36A RPS10B RPL9B RPL18A RPS19A RPS12 RPS9A RPS6A RPL7B RPL1A RPL43A        43        240

cytoplasmic ribosomal small subunit       5.39235e-13    RPS8A RPS29B RPS17B RPS8B RPS26B RPS25A RPS0A RPS5 RPS4A RPS27A RPS21A RPS31 RPS1A ASC1 RPS10B RPS19A RPS12 RPS9A RPS6A   19        57

cytoplasmic ribosomal large subunit       5.22868e-10    RPP1B RPL34A RPL29 RPL1B RPL9A RPL11B RPL14B RPL8A RPL40B RPL22A RPL10 RPL38 RPL31B RPL36A RPL9B RPL18A RPL7B RPL1A RPL43A       19        81

 

 

 

MIPS Protein Classes

Category          p-value In Category from Cluster          k          f

 

 

 

GO Molecular Function

Category          p-value In Category from Cluster          k          f

structural constituent of ribosome [GO:0003735]          1e-14   RPS8A RPS29B RPP1B RPS17B RPL34A RPS8B RPS26B RPL29 RPL1B RPL9A RPS25A RPL11B RPS0A RPL14B RPL8A MRPL8 RPS5 RPS4A RPS27A RPS21A RPL40B RPL22A RPL10 RPS31 MRPL15 RPL38 RPL31B RPS1A RPL36A RPS10B RPL9B RPL18A RPS19A RPS12 RPS9A RPS6A RPL7B RPL1A RPL43A        39        206

structural molecule [GO:0005198]        5.75484e-12    RPS8A RPS29B RPP1B RPS17B RPL34A RPS8B RPS26B RPL29 MPS2 RPL1B RPL9A RPS25A RPL11B RPS0A RPL14B RPL8A MRPL8 RPS5 RPS4A CWP1 RPS27A RPS21A RPL40B RPL22A RPL10 RPS31 MRPL15 RPL38 CCW14 RPL31B RPS1A RPL36A RPS10B RPL9B RPL18A RPS19A RPS12 RPS9A RPS6A RPL7B RPL1A RPL43A 42        310

 

 

 

GO Biological Process

Category          p-value In Category from Cluster          k          f

macromolecule biosynthesis [GO:0009059]      1.53433e-13    SKT5 RPS8A TEF2 KTR3 SRO9 PSA1 RPS29B RPP1B SSB1 RPS17B RPL34A RPS8B RPS26B CCA1 RPL29 RPL1B RPL9A RPS25A RPL11B RPS0A RPL14B RPL8A EGD2 LAS21 MRPL8 RPS5 RPS4A TEF4 RPS27A RPS21A RPL40B RPL22A RPL10 RPS31 YEF3 MRPL15 RPL38 RPL31B RPS1A SEC59 RPL36A RPS10B RPL9B RPL18A RPS19A OST2 RPS12 EGD1 RPS9A RPS6A RPL7B RPL1A RPL43A         53        422

protein biosynthesis [GO:0006412]       2.86438e-13    RPS8A TEF2 KTR3 SRO9 PSA1 RPS29B RPP1B SSB1 RPS17B RPL34A RPS8B RPS26B CCA1 RPL29 RPL1B RPL9A RPS25A RPL11B RPS0A RPL14B RPL8A EGD2 LAS21 MRPL8 RPS5 RPS4A TEF4 RPS27A RPS21A RPL40B RPL22A RPL10 RPS31 YEF3 MRPL15 RPL38 RPL31B RPS1A SEC59 RPL36A RPS10B RPL9B RPL18A RPS19A OST2 RPS12 EGD1 RPS9A RPS6A RPL7B RPL1A RPL43A          52        415

biosynthesis [GO:0009058]      1.27426e-09    SKT5 RPS8A TEF2 PGI1 KTR3 HIS4 SRO9 PSA1 RPS29B RPP1B SSB1 TPI1 PRO1 ADE8 RPS17B GCN4 RPL34A RPS8B RPS26B CCA1 RPL29 RPL1B RPL9A RPS25A GSC2 RPL11B TDH3 RPS0A RPL14B RPL8A EGD2 INP51 LAS21 MRPL8 OPI3 RPS5 RPS4A TEF4 MCR1 RPS27A FAS1 RPS21A RPL40B RPL22A RPL10 RPS31 YEF3 MRPL15 RPL38 RPL31B RPS1A SEC59 RPL36A RPS10B RPL9B RPL18A RPS19A OST2 RPS12 EGD1 RPS9A RPS6A RPL7B RPL1A RPL43A    65        731

 

 

 

GO Cellular Component

Category          p-value In Category from Cluster          k          f

cytosolic ribosome (sensu Eukarya) [GO:0005830]       1e-14   RPS8A RPS29B RPP1B RPS17B RPL34A RPS8B RPS26B RPL29 RPL1B RPL9A RPS25A RPL11B RPS0A RPL14B RPL8A RPS5 RPS4A RPS27A RPS21A RPL40B RPL22A RPL10 RPS31 RPL38 RPL31B RPS1A RPL36A RPS10B RPL9B RPL18A RPS19A RPS12 RPS9A RPS6A RPL7B RPL1A RPL43A         37        151

ribosome [GO:0005840]          1e-14   RPS8A TEF2 SRO9 RPS29B RPP1B SSB1 RPS17B RPL34A RPS8B RPS26B RPL29 RPL1B RPL9A RPS25A RPL11B RPS0A RPL14B RPL8A MRPL8 RPS5 RPS4A TEF4 RPS27A RPS21A RPL40B RPL22A RPL10 RPS31 YEF3 MRPL15 RPL38 RPL31B RPS1A RPL36A RPS10B RPL9B RPL18A RPS19A RPS12 RPS9A RPS6A RPL7B RPL1A RPL43A     44        258

cytosol [GO:0005829] 3.16636e-13    RPS8A PGI1 RPS29B RPP1B TPI1 RPS17B RPL34A RPS8B RPS26B RPL29 RPL1B RPL9A RPS25A RPL11B TDH3 RPS0A RPL14B RPL8A RPS5 RPS4A RPS27A FAS1 RPS21A RPL40B RPL22A RPL10 RPS31 RPL38 RPL31B RPS1A RPL36A PFK2 RPS10B RPL9B RPL18A RPS19A NOB1 VTS1 RPS12 RPS9A RPS6A RPL7B RPL1A RPL43A        44        310

ribonucleoprotein complex [GO:0030529]        4.96381e-13    RPS8A TEF2 SRO9 RPS29B RPP1B SSB1 UTP4 RPS17B RPL34A RPS8B RPS26B RPL29 RPL1B RPL9A RPS25A RPL11B RPS0A RPL14B RPL8A MRPL8 RPS5 RPS4A TEF4 RPS27A RPS21A RPL40B RPL22A RPL10 RPS31 YEF3 MRPL15 RPL38 RPL31B RPS1A UTP15 ECM16 RPL36A RRP5 RPS10B RPL9B RPL18A RPS19A RPS12 RPS9A RPS6A RPL7B RPL1A RPL43A BRR1             49        380

eukaryotic 48S initiation complex [GO:0016283]          2.36998e-11    RPS8A RPS29B RPS17B RPS8B RPS26B RPS25A RPS0A RPS5 RPS4A RPS27A RPS21A RPS31 RPS1A RPS10B RPS19A RPS12 RPS9A RPS6A          18            61

cytosolic small ribosomal subunit (sensu Eukarya) [GO:0005843]          2.36998e-11    RPS8A RPS29B RPS17B RPS8B RPS26B RPS25A RPS0A RPS5 RPS4A RPS27A RPS21A RPS31 RPS1A RPS10B RPS19A RPS12 RPS9A RPS6A             18        61

eukaryotic 43S pre-initiation complex [GO:0016282]    1.34763e-10    RPS8A RPS29B RPS17B RPS8B RPS26B RPS25A RPS0A RPS5 RPS4A RPS27A RPS21A RPS31 RPS1A RPS10B RPS19A RPS12 RPS9A RPS6A          18            67

cytosolic large ribosomal subunit (sensu Eukarya) [GO:0005842]          8.18159e-10    RPP1B RPL34A RPL29 RPL1B RPL9A RPL11B RPL14B RPL8A RPL40B RPL22A RPL10 RPL38 RPL31B RPL36A RPL9B RPL18A RPL7B RPL1A RPL43A          19        83

small ribosomal subunit [GO:0015935] 1.56966e-08    RPS8A RPS29B RPS17B RPS8B RPS26B RPS25A RPS0A RPS5 RPS4A RPS27A RPS21A RPS31 RPS1A RPS10B RPS19A RPS12 RPS9A RPS6A             18        88

large ribosomal subunit [GO:0015934]  2.47044e-08    RPP1B RPL34A RPL29 RPL1B RPL9A RPL11B RPL14B RPL8A MRPL8 RPL40B RPL22A RPL10 MRPL15 RPL38 RPL31B RPL36A RPL9B RPL18A RPL7B RPL1A RPL43A          21        122

 

 

 

SMART Domains

Category          p-value In Category from Cluster          k          f

 

 

 

PFam-A Domains

Category          p-value In Category from Cluster          k          f

 

 

 

Yeast Two Hybrid - Uetz

Category          p-value In Category from Cluster          k          f

 

 

 

Yeast Two Hybrid - Ito (core)

Category          p-value In Category from Cluster          k          f

 

 

 

Yeast Two Hybrid - Ito (full)

Category          p-value In Category from Cluster          k          f

 

 

 

Synthetic Genetic Array Analysis

Category          p-value In Category from Cluster          k          f

 

 

 

MDS Proteomics Complexes

Category          p-value In Category from Cluster          k          f

 

 

 

Cellzome Complexes

Category          p-value In Category from Cluster          k          f

 

 

 

Proteome Localization--Observed

Category          p-value In Category from Cluster          k          f

 

 

 

Proteome Localization--Predicted+Observed

Category          p-value In Category from Cluster          k          f

nuc       0.0123971       ORC2 KCC4 GFD2 YPD1 YDR249C PAM1 PEX10 CFT1 UTP4 YCG1 SHE9 SIZ1 ADA2 GCN4 ACA1 SAP1 YER130C RPH1 EPL1 RCS1 HSF1 MPS2 SCY1 SNF4 MRM2 RNR4 NET1 YJL091C RPA34 MOG1 CSN12 SGM1 HMS2 MRT4 PUT3 YKL033W LST4 SRP40 MLP1 SSL1 YLR023C BUD20 CDC45 SEC10 HAP1 YLR407W SST2 SPT5 BUD22 AIP1 UTP15 SAS2 ECM16 YMR144W RRP5 FKH2 UBP10 RAP1 YNL254C YOL161C HMS1 NOB1 AZF1 RPA43 RPA190 MSC6 GDS1 EGD1 LGE1 GCR1 MOT1 BRR1 ISR1 RPC40 CTF4 SGV1    76        1435

 

 

 

Deletions Consortium (Essentiality, Morphology)

Category          p-value In Category from Cluster          k          f

 

 

 

Yeast Fitness Data

Category          p-value In Category from Cluster          k          f

 

 

 

Published Complexes

Category          p-value In Category from Cluster          k          f

Andersen et al. (2002) - Curr Bio 12:1-            0.0037549       RPS8B RPL1B RPL11B RPS0A RPL14B RPS5 RPS4A MRT4 SRP40 RPL22A RRP5 RPL9B RPA190 RPS12 RPC40         15        165

 

(go back to top)


Rap1-PBMandnotLeeChIP-2SD.FunSpec.txt

Input Cluster (n=152)

YBL029C-A

YBL029W

YBL049W

YBL060W

YBL061C        SKT5

YBL069W       AST1

YBL071W-A   KTI11

YBL072C        RPS8A

YBR060C        ORC2

YBR117C        TKL2

YBR118W       TEF2

YBR179C        FZO1

YBR180W       DTR1

YCL024W       KCC4

YCL025C        AGP1

YCL030C        HIS4

YCL036W       GFD2

YCL037C        SRO9

YDL022W       GPD1

YDL060W       TSR1

YDL061C        RPS29B

YDL130W       RPP1B

YDL229W       SSB1

YDR070C

YDR109C

YDR110W      FOB1

YDR249C

YDR251W      PAM1

YDR276C       PMP3

YDR300C       PRO1

YDR301W      CFT1

YDR393W      SHE9

YDR408C       ADE8

YDR409W      SIZ1

YDR447C       RPS17B

YDR448W      ADA2

YEL007W

YEL009C        GCN4

YER033C        ZRG8

YER034W

YER047C        SAP1

YER056C-A    RPL34A

YER101C        AST2

YER102W       RPS8B

YER168C        CCA1

YER169W       RPH1

YFL023W       BUD27

YFL024C        EPL1

YGL073W       HSF1

YGL075C        MPS2

YGL083W       SCY1

YGL084C        GUP1

YGL115W       SNF4

YGL147C        RPL9A

YGR027C       RPS25A

YGR085C       RPL11B

YGR192C       TDH3

YGR233C       PHO81

YGR234W      YHB1

YHL001W       RPL14B

YHL033C        RPL8A

YHL036W       MUP3

YHL038C        CBP2

YHR122W

YIL001W

YIL002C         INP51

YJL049W

YJR073C         OPI3

YJR074W        MOG1

YJR123W        RPS5

YJR139C         HOM6

YKL015W      PUT3

YKL016C       ATP7

YKL081W      TEF4

YKL082C

YKL150W      MCR1

YKL151C

YKL156W      RPS27A

YKL178C       STE3

YKL182W      FAS1

YKR057W      RPS21A

YKR094C       RPL40B

YKR095W      MLP1

YLR003C

YLR004C

YLR005W       SSL1

YLR023C

YLR061W       RPL22A

YLR074C        BUD20

YLR075W       RPL10

YLR208W       SEC13

YLR249W       YEF3

YLR286C        CTS1

YLR325C        RPL38

YLR326W

YLR390W-A   CCW14

YLR406C        RPL31B

YLR407W

YLR413W

YLR437C

YLR438W       CAR2

YLR452C        SST2

YMR013C       SEC59

YMR013W-A

YMR014W      BUD22

YMR026C       PEX12

YMR027W      HRT2

YMR092C       AIP1

YMR093W      UTP15

YMR116C       ASC1

YMR144W

YMR194W      RPL36A

YMR205C       PFK2

YMR206W

YMR229C       RRP5

YMR230W      RPS10B

YMR231W      PEP5

YMR243C       ZRC1

YMR244W

YNL010W

YNL011C

YNL101W

YNL154C       YCK2

YNL186W      UBP10

YNL216W      RAP1

YNL253W

YNL254C

YOL121C       RPS19A

YOR032C       HMS1

YOR043W      WHI2

YOR056C       NOB1

YOR057W      SGT1

YOR103C       OST2

YOR104W      PIN2

YOR113W      AZF1

YOR124C       UBP2

YOR340C       RPA43

YOR341W      RPA190

YOR369C       RPS12

YPL075W       GCR1

YPL081W       RPS9A

YPL082C        MOT1

YPL090C        RPS6A

YPL198W       RPL7B

YPL199C

YPL220W       RPL1A

YPR057W       BRR1

YPR105C        COG4

YPR106W       ISR1

YPR110C        RPC40

YPR111W       DBF20

YPR161C        SGV1

 

Genes Not Found:

 

SNR38

SNR62

SNR72

SNR73

SNR74

SNR75

SNR76

SNR77

SNR78

YBL071C-B

YGR027W-A

YGR027W-B

YLR264C-A

YLR406C-A

YLR412C-A

YMR230W-A

YOR032W-A

MIPS Functional Classification

Category          p-value In Category from Cluster          k          f

ribosome biogenesis      1.20792e-13    RPS8A RPS29B RPP1B RPS17B RPL34A RPS8B RPL9A RPS25A RPL11B RPL14B RPL8A RPS5 RPS27A RPS21A RPL40B RPL22A RPL10 RPL38 RPL31B ASC1 RPL36A RPS10B RPS19A RPS12 RPS9A RPS6A RPL7B RPL1A        28        215

cytoplasm         1.7053e-12      RPS8A TKL2 TEF2 GPD1 RPS29B RPP1B SSB1 FOB1 PRO1 ADE8 RPS17B RPL34A RPS8B CCA1 RPL9A RPS25A RPL11B TDH3 YHB1 RPL14B RPL8A RPS5 TEF4 RPS27A FAS1 RPS21A RPL40B RPL10 YEF3 RPL38 RPL31B CAR2 ASC1 RPL36A PFK2 RPS10B RPS19A UBP2 RPS12 RPS9A RPS6A RPL7B RPL1A          43        554

PROTEIN SYNTHESIS          2.56173e-12    RPS8A TEF2 RPS29B RPP1B SSB1 RPS17B RPL34A RPS8B RPL9A RPS25A RPL11B RPL14B RPL8A RPS5 TEF4 RPS27A RPS21A RPL40B SSL1 RPL22A RPL10 YEF3 RPL38 RPL31B ASC1 RPL36A RPS10B RAP1 RPS19A RPS12 RPS9A RPS6A RPL7B RPL1A   34        359

SUBCELLULAR LOCALISATION   7.87989e-06    RPS8A ORC2 TKL2 TEF2 FZO1 KCC4 AGP1 GPD1 RPS29B RPP1B SSB1 FOB1 PRO1 CFT1 ADE8 RPS17B ADA2 GCN4 SAP1 RPL34A RPS8B CCA1 HSF1 MPS2 SNF4 RPL9A RPS25A RPL11B TDH3 YHB1 RPL14B RPL8A MUP3 CBP2 OPI3 RPS5 PUT3 ATP7 TEF4 MCR1 RPS27A STE3 FAS1 RPS21A RPL40B MLP1 RPL10 SEC13 YEF3 CTS1 RPL38 RPL31B CAR2 SST2 SEC59 PEX12 AIP1 ASC1 RPL36A PFK2 RRP5 RPS10B PEP5 ZRC1 YCK2 RAP1 RPS19A OST2 AZF1 UBP2 RPA43 RPA190 RPS12 GCR1 RPS9A MOT1 RPS6A RPL7B RPL1A BRR1 RPC40          81        2256

 

 

 

MIPS Phenotypes

Category          p-value In Category from Cluster          k          f

 

 

 

MIPS Subcellular Localization

Category          p-value In Category from Cluster          k          f

cytoplasm         9.76219e-13    RPS8A TKL2 TEF2 SRO9 GPD1 RPS29B RPP1B SSB1 FOB1 PRO1 ADE8 RPS17B RPL34A RPS8B CCA1 RPL9A RPS25A RPL11B TDH3 YHB1 RPL14B RPL8A RPS5 TEF4 RPS27A FAS1 RPS21A RPL40B RPL22A RPL10 YEF3 RPL38 RPL31B CAR2 ASC1 RPL36A PFK2 RPS10B RPS19A UBP2 RPS12 RPS9A RPS6A RPL7B RPL1A          45        593

 

 

 

MIPS Protein Complexes

Category          p-value In Category from Cluster          k          f

Cytoplasmic ribosomes 1e-14   RPS8A RPS29B RPP1B RPS17B RPL34A RPS8B RPL9A RPS25A RPL11B RPL14B RPL8A RPS5 RPS27A RPS21A RPL40B RPL22A RPL10 RPL38 RPL31B ASC1 RPL36A RPS10B RPS19A RPS12 RPS9A RPS6A RPL7B RPL1A          28        138

Translation complexes   1e-14   RPS8A TEF2 RPS29B RPP1B RPS17B RPL34A RPS8B RPL9A RPS25A RPL11B RPL14B RPL8A RPS5 TEF4 RPS27A RPS21A RPL40B RPL22A RPL10 YEF3 RPL38 RPL31B ASC1 RPL36A RPS10B RPS19A RPS12 RPS9A RPS6A RPL7B RPL1A     31        240

cytoplasmic ribosomal small subunit       4.19103e-11    RPS8A RPS29B RPS17B RPS8B RPS25A RPS5 RPS27A RPS21A ASC1 RPS10B RPS19A RPS12 RPS9A RPS6A     14        57

cytoplasmic ribosomal large subunit       6.01797e-09    RPP1B RPL34A RPL9A RPL11B RPL14B RPL8A RPL40B RPL22A RPL10 RPL38 RPL31B RPL36A RPL7B RPL1A    14        81

 

 

 

MIPS Protein Classes

Category          p-value In Category from Cluster          k          f

 

 

 

GO Molecular Function

Category          p-value In Category from Cluster          k          f

structural constituent of ribosome [GO:0003735]          2.9321e-13      RPS8A RPS29B RPP1B RPS17B RPL34A RPS8B RPL9A RPS25A RPL11B RPL14B RPL8A RPS5 RPS27A RPS21A RPL40B RPL22A RPL10 RPL38 RPL31B RPL36A RPS10B RPS19A RPS12 RPS9A RPS6A RPL7B RPL1A            27        206

structural molecule [GO:0005198]        1.86152e-10    RPS8A RPS29B RPP1B RPS17B RPL34A RPS8B MPS2 RPL9A RPS25A RPL11B RPL14B RPL8A RPS5 RPS27A RPS21A RPL40B RPL22A RPL10 RPL38 CCW14 RPL31B RPL36A RPS10B RPS19A RPS12 RPS9A RPS6A RPL7B RPL1A            29        310

 

 

 

GO Biological Process

Category          p-value In Category from Cluster          k          f

macromolecule biosynthesis [GO:0009059]      1.14632e-11    SKT5 RPS8A TEF2 SRO9 RPS29B RPP1B SSB1 RPS17B RPL34A RPS8B CCA1 RPL9A RPS25A RPL11B RPL14B RPL8A RPS5 TEF4 RPS27A RPS21A RPL40B RPL22A RPL10 YEF3 RPL38 RPL31B SEC59 RPL36A RPS10B RPS19A OST2 RPS12 RPS9A RPS6A RPL7B RPL1A            36        422

protein biosynthesis [GO:0006412]       3.28239e-11    RPS8A TEF2 SRO9 RPS29B RPP1B SSB1 RPS17B RPL34A RPS8B CCA1 RPL9A RPS25A RPL11B RPL14B RPL8A RPS5 TEF4 RPS27A RPS21A RPL40B RPL22A RPL10 YEF3 RPL38 RPL31B SEC59 RPL36A RPS10B RPS19A OST2 RPS12 RPS9A RPS6A RPL7B RPL1A   35        415

biosynthesis [GO:0009058]      1.25535e-09    SKT5 RPS8A TEF2 HIS4 SRO9 RPS29B RPP1B SSB1 PRO1 ADE8 RPS17B GCN4 RPL34A RPS8B CCA1 RPL9A RPS25A RPL11B TDH3 RPL14B RPL8A INP51 OPI3 RPS5 TEF4 MCR1 RPS27A FAS1 RPS21A RPL40B RPL22A RPL10 YEF3 RPL38 RPL31B SEC59 RPL36A RPS10B RPS19A OST2 RPS12 RPS9A RPS6A RPL7B RPL1A            45        731

protein metabolism [GO:0019538]        6.65751e-06    AST1 RPS8A TEF2 KCC4 SRO9 RPS29B RPP1B SSB1 SIZ1 RPS17B ADA2 RPL34A RPS8B CCA1 EPL1 RPL9A RPS25A RPL11B RPL14B RPL8A MOG1 RPS5 TEF4 RPS27A RPS21A RPL40B MLP1 RPL22A RPL10 SEC13 YEF3 RPL38 RPL31B SEC59 RPL36A RPS10B PEP5 YCK2 UBP10 RPS19A NOB1 OST2 UBP2 RPS12 RPS9A RPS6A RPL7B RPL1A COG4 DBF20 SGV1            51            1168

 

 

 

GO Cellular Component

Category          p-value In Category from Cluster          k          f

cytosolic ribosome (sensu Eukarya) [GO:0005830]       1e-14   RPS8A RPS29B RPP1B RPS17B RPL34A RPS8B RPL9A RPS25A RPL11B RPL14B RPL8A RPS5 RPS27A RPS21A RPL40B RPL22A RPL10 RPL38 RPL31B RPL36A RPS10B RPS19A RPS12 RPS9A RPS6A RPL7B RPL1A 27        151

ribosome [GO:0005840]          1.25455e-14    RPS8A TEF2 SRO9 RPS29B RPP1B SSB1 RPS17B RPL34A RPS8B RPL9A RPS25A RPL11B RPL14B RPL8A RPS5 TEF4 RPS27A RPS21A RPL40B RPL22A RPL10 YEF3 RPL38 RPL31B RPL36A RPS10B RPS19A RPS12 RPS9A RPS6A RPL7B RPL1A            32        258

ribonucleoprotein complex [GO:0030529]        2.57983e-12    RPS8A TEF2 SRO9 RPS29B RPP1B SSB1 RPS17B RPL34A RPS8B RPL9A RPS25A RPL11B RPL14B RPL8A RPS5 TEF4 RPS27A RPS21A RPL40B RPL22A RPL10 YEF3 RPL38 RPL31B UTP15 RPL36A RRP5 RPS10B RPS19A RPS12 RPS9A RPS6A RPL7B RPL1A BRR1     35            380

cytosol [GO:0005829] 6.80378e-12    RPS8A RPS29B RPP1B RPS17B RPL34A RPS8B RPL9A RPS25A RPL11B TDH3 RPL14B RPL8A RPS5 RPS27A FAS1 RPS21A RPL40B RPL22A RPL10 RPL38 RPL31B RPL36A PFK2 RPS10B RPS19A NOB1 RPS12 RPS9A RPS6A RPL7B RPL1A      31        310

eukaryotic 48S initiation complex [GO:0016283]          1.44737e-09    RPS8A RPS29B RPS17B RPS8B RPS25A RPS5 RPS27A RPS21A RPS10B RPS19A RPS12 RPS9A RPS6A             13        61

cytosolic small ribosomal subunit (sensu Eukarya) [GO:0005843]          1.44737e-09    RPS8A RPS29B RPS17B RPS8B RPS25A RPS5 RPS27A RPS21A RPS10B RPS19A RPS12 RPS9A RPS6A            13        61

eukaryotic 43S pre-initiation complex [GO:0016282]    4.93382e-09    RPS8A RPS29B RPS17B RPS8B RPS25A RPS5 RPS27A RPS21A RPS10B RPS19A RPS12 RPS9A RPS6A             13        67

cytosolic large ribosomal subunit (sensu Eukarya) [GO:0005842]          8.37237e-09    RPP1B RPL34A RPL9A RPL11B RPL14B RPL8A RPL40B RPL22A RPL10 RPL38 RPL31B RPL36A RPL7B RPL1A          14        83

small ribosomal subunit [GO:0015935] 1.50549e-07    RPS8A RPS29B RPS17B RPS8B RPS25A RPS5 RPS27A RPS21A RPS10B RPS19A RPS12 RPS9A RPS6A    13        88

large ribosomal subunit [GO:0015934]  1.19843e-06    RPP1B RPL34A RPL9A RPL11B RPL14B RPL8A RPL40B RPL22A RPL10 RPL38 RPL31B RPL36A RPL7B RPL1A    14        122

cell [GO:0005623]       7.31579e-06    SKT5 AST1 RPS8A ORC2 TEF2 FZO1 KCC4 AGP1 HIS4 SRO9 GPD1 TSR1 RPS29B RPP1B SSB1 FOB1 PMP3 CFT1 SHE9 SIZ1 RPS17B ADA2 GCN4 RPL34A AST2 RPS8B CCA1 RPH1 EPL1 HSF1 MPS2 GUP1 SNF4 RPL9A RPS25A RPL11B TDH3 RPL14B RPL8A MUP3 CBP2 INP51 OPI3 MOG1 RPS5 PUT3 ATP7 TEF4 MCR1 RPS27A STE3 FAS1 RPS21A RPL40B MLP1 SSL1 RPL22A BUD20 RPL10 SEC13 YEF3 CTS1 RPL38 RPL31B YLR437C CAR2 SST2 SEC59 BUD22 PEX12 AIP1 UTP15 ASC1 YMR144W RPL36A PFK2 RRP5 RPS10B PEP5 ZRC1 YCK2 UBP10 RAP1 RPS19A NOB1 SGT1 OST2 AZF1 UBP2 RPA43 RPA190 RPS12 GCR1 RPS9A MOT1 RPS6A RPL7B RPL1A BRR1 COG4 RPC40 SGV1            102      3106

intracellular [GO:0005622]       4.86092e-05    SKT5 RPS8A ORC2 TEF2 FZO1 AGP1 SRO9 GPD1 TSR1 RPS29B RPP1B SSB1 FOB1 PMP3 CFT1 SHE9 SIZ1 RPS17B ADA2 GCN4 RPL34A AST2 RPS8B CCA1 RPH1 EPL1 HSF1 MPS2 SNF4 RPL9A RPS25A RPL11B TDH3 RPL14B RPL8A CBP2 OPI3 MOG1 RPS5 PUT3 ATP7 TEF4 MCR1 RPS27A STE3 FAS1 RPS21A RPL40B MLP1 SSL1 RPL22A BUD20 RPL10 SEC13 YEF3 CTS1 RPL38 RPL31B YLR437C CAR2 SST2 BUD22 PEX12 AIP1 UTP15 ASC1 YMR144W RPL36A PFK2 RRP5 RPS10B PEP5 ZRC1 YCK2 UBP10 RAP1 RPS19A NOB1 SGT1 OST2 AZF1 UBP2 RPA43 RPA190 RPS12 GCR1 RPS9A MOT1 RPS6A RPL7B RPL1A BRR1 COG4 RPC40 SGV1 95        2921

 

 

 

SMART Domains

Category          p-value In Category from Cluster          k          f

 

 

 

PFam-A Domains

Category          p-value In Category from Cluster          k          f

 

 

 

Yeast Two Hybrid - Uetz

Category          p-value In Category from Cluster          k          f

 

 

 

Yeast Two Hybrid - Ito (core)

Category          p-value In Category from Cluster          k          f

 

 

 

Yeast Two Hybrid - Ito (full)

Category          p-value In Category from Cluster          k          f

 

 

 

Synthetic Genetic Array Analysis

Category          p-value In Category from Cluster          k          f

 

 

 

MDS Proteomics Complexes

Category          p-value In Category from Cluster          k          f

 

 

 

Cellzome Complexes

Category          p-value In Category from Cluster          k          f

 

 

 

Proteome Localization--Observed

Category          p-value In Category from Cluster          k          f

 

 

 

Proteome Localization--Predicted+Observed

Category          p-value In Category from Cluster          k          f

 

 

 

Deletions Consortium (Essentiality, Morphology)

Category          p-value In Category from Cluster          k          f

 

 

 

Yeast Fitness Data

Category          p-value In Category from Cluster          k          f

 

 

 

Published Complexes

Category          p-value In Category from Cluster          k          f

 

(go back to top)


Rap1-PBMandnotLeeChIP-exact.FunSpec.txt

 Input Cluster (n=12)

YBL049W

YCL030C        HIS4

YER047C        SAP1

YJR073C         OPI3

YJR074W        MOG1

YKR057W      RPS21A

YMR013W-A

YMR014W      BUD22

YMR116C       ASC1

YNL216W      RAP1

YOR032C       HMS1

YOR124C       UBP2

 

Genes Not Found:

 

SNR72

SNR73

SNR74

SNR75

YOR032W-A

MIPS Functional Classification

Category          p-value In Category from Cluster          k          f

 

 

 

MIPS Phenotypes

Category          p-value In Category from Cluster          k          f

 

 

 

MIPS Subcellular Localization

Category          p-value In Category from Cluster          k          f

 

 

 

MIPS Protein Complexes

Category          p-value In Category from Cluster          k          f

 

 

 

MIPS Protein Classes

Category          p-value In Category from Cluster          k          f

 

 

 

GO Molecular Function

Category          p-value In Category from Cluster          k          f

 

 

 

GO Biological Process

Category          p-value In Category from Cluster          k          f

 

 

 

GO Cellular Component

Category          p-value In Category from Cluster          k          f

 

 

 

SMART Domains

Category          p-value In Category from Cluster          k          f

 

 

 

PFam-A Domains

Category          p-value In Category from Cluster          k          f

 

 

 

Yeast Two Hybrid - Uetz

Category          p-value In Category from Cluster          k          f

 

 

 

Yeast Two Hybrid - Ito (core)

Category          p-value In Category from Cluster          k          f

 

 

 

Yeast Two Hybrid - Ito (full)

Category          p-value In Category from Cluster          k          f

 

 

 

Synthetic Genetic Array Analysis

Category          p-value In Category from Cluster          k          f

 

 

 

MDS Proteomics Complexes

Category          p-value In Category from Cluster          k          f

 

 

 

Cellzome Complexes

Category          p-value In Category from Cluster          k          f

 

 

 

Proteome Localization--Observed

Category          p-value In Category from Cluster          k          f

 

 

 

Proteome Localization--Predicted+Observed

Category          p-value In Category from Cluster          k          f

 

 

 

Deletions Consortium (Essentiality, Morphology)

Category          p-value In Category from Cluster          k          f

 

 

 

Yeast Fitness Data

Category          p-value In Category from Cluster          k          f

 

 

 

Published Complexes

Category          p-value In Category from Cluster          k          f

 

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Rap1-LeeChIPandnotPBM-alldata.FunSpec.txt

 Input Cluster (n=20)

YCR024C-A   PMP1

YDR025W      RPS11A

YDR100W

YDR312W      SSF2

YEL075C

YIL121W

YJL177W        RPL17B

YJL178C

YKL062W      MSN4

YKL063C

YNL162W      RPL42A

YNL162W-A

YNL163C       RIA1

YNL329C       PEX6

YOR342C

YOR344C       TYE7

YPL144W

YPL145C        KES1

YPR131C        NAT3

YPR132W       RPS23B

 

Genes Not Found:

 

TP%28UGG%29O3

YCR024C-B

YOR343W-A

YOR343W-B

MIPS Functional Classification

Category          p-value In Category from Cluster          k          f

 

 

 

MIPS Phenotypes

Category          p-value In Category from Cluster          k          f

paromomycin sensitivity            0.000201275   RPS11A RPS23B        2          7

 

 

 

MIPS Subcellular Localization

Category          p-value In Category from Cluster          k          f

 

 

 

MIPS Protein Complexes

Category          p-value In Category from Cluster          k          f

 

 

 

MIPS Protein Classes

Category          p-value In Category from Cluster          k          f

 

 

 

GO Molecular Function

Category          p-value In Category from Cluster          k          f

 

 

 

GO Biological Process

Category          p-value In Category from Cluster          k          f

 

 

 

GO Cellular Component

Category          p-value In Category from Cluster          k          f

 

 

 

SMART Domains

Category          p-value In Category from Cluster          k          f

 

 

 

PFam-A Domains

Category          p-value In Category from Cluster          k          f

 

 

 

Yeast Two Hybrid - Uetz

Category          p-value In Category from Cluster          k          f

 

 

 

Yeast Two Hybrid - Ito (core)

Category          p-value In Category from Cluster          k          f

 

 

 

Yeast Two Hybrid - Ito (full)

Category          p-value In Category from Cluster          k          f

 

 

 

Synthetic Genetic Array Analysis

Category          p-value In Category from Cluster          k          f

 

 

 

MDS Proteomics Complexes

Category          p-value In Category from Cluster          k          f

 

 

 

Cellzome Complexes

Category          p-value In Category from Cluster          k          f

 

 

 

Proteome Localization--Observed

Category          p-value In Category from Cluster          k          f

 

 

 

Proteome Localization--Predicted+Observed

Category          p-value In Category from Cluster          k          f

 

 

 

Deletions Consortium (Essentiality, Morphology)

Category          p-value In Category from Cluster          k          f

 

 

 

Yeast Fitness Data

Category          p-value In Category from Cluster          k          f

 

 

 

Published Complexes

Category          p-value In Category from Cluster          k          f

 

(go back to top)


Rap1-LeeChIPandnotPBM-2SD.FunSpec.txt

 Input Cluster (n=8)

YJL177W        RPL17B

YJL178C

YNL162W      RPL42A

YNL162W-A

YNL163C       RIA1

YOR344C       TYE7

YPL144W

YPL145C        KES1

 

Genes Not Found:

 

TP%28UGG%29O3

MIPS Functional Classification

Category          p-value In Category from Cluster          k          f

 

 

 

MIPS Phenotypes

Category          p-value In Category from Cluster          k          f

 

 

 

MIPS Subcellular Localization

Category          p-value In Category from Cluster          k          f

 

 

 

MIPS Protein Complexes

Category          p-value In Category from Cluster          k          f

 

 

 

MIPS Protein Classes

Category          p-value In Category from Cluster          k          f

 

 

 

GO Molecular Function

Category          p-value In Category from Cluster          k          f

 

 

 

GO Biological Process

Category          p-value In Category from Cluster          k          f

 

 

 

GO Cellular Component

Category          p-value In Category from Cluster          k          f

 

 

 

SMART Domains

Category          p-value In Category from Cluster          k          f

 

 

 

PFam-A Domains

Category          p-value In Category from Cluster          k          f

 

 

 

Yeast Two Hybrid - Uetz

Category          p-value In Category from Cluster          k          f

 

 

 

Yeast Two Hybrid - Ito (core)

Category          p-value In Category from Cluster          k          f

 

 

 

Yeast Two Hybrid - Ito (full)

Category          p-value In Category from Cluster          k          f

 

 

 

Synthetic Genetic Array Analysis

Category          p-value In Category from Cluster          k          f

 

 

 

MDS Proteomics Complexes

Category          p-value In Category from Cluster          k          f

 

 

 

Cellzome Complexes

Category          p-value In Category from Cluster          k          f

 

 

 

Proteome Localization--Observed

Category          p-value In Category from Cluster          k          f

 

 

 

Proteome Localization--Predicted+Observed

Category          p-value In Category from Cluster          k          f

 

 

 

Deletions Consortium (Essentiality, Morphology)

Category          p-value In Category from Cluster          k          f

 

 

 

Yeast Fitness Data

Category          p-value In Category from Cluster          k          f

 

 

 

Published Complexes

Category          p-value In Category from Cluster          k          f

 

(go back to top)


Rap1-LeeChIPandnotPBM-exact.FunSpec.txt

 Input Cluster (n=2)

YPL144W

YPL145C        KES1

 

Genes Not Found:

 

MIPS Functional Classification

Category          p-value In Category from Cluster          k          f

 

 

 

MIPS Phenotypes

Category          p-value In Category from Cluster          k          f

 

 

 

MIPS Subcellular Localization

Category          p-value In Category from Cluster          k          f

 

 

 

MIPS Protein Complexes

Category          p-value In Category from Cluster          k          f

 

 

 

MIPS Protein Classes

Category          p-value In Category from Cluster          k          f

 

 

 

GO Molecular Function

Category          p-value In Category from Cluster          k          f

 

 

 

GO Biological Process

Category          p-value In Category from Cluster          k          f

 

 

 

GO Cellular Component

Category          p-value In Category from Cluster          k          f

 

 

 

SMART Domains

Category          p-value In Category from Cluster          k          f

 

 

 

PFam-A Domains

Category          p-value In Category from Cluster          k          f

 

 

 

Yeast Two Hybrid - Uetz

Category          p-value In Category from Cluster          k          f

 

 

 

Yeast Two Hybrid - Ito (core)

Category          p-value In Category from Cluster          k          f

 

 

 

Yeast Two Hybrid - Ito (full)

Category          p-value In Category from Cluster          k          f

 

 

 

Synthetic Genetic Array Analysis

Category          p-value In Category from Cluster          k          f

 

 

 

MDS Proteomics Complexes

Category          p-value In Category from Cluster          k          f

 

 

 

Cellzome Complexes

Category          p-value In Category from Cluster          k          f

 

 

 

Proteome Localization--Observed

Category          p-value In Category from Cluster          k          f

 

 

 

Proteome Localization--Predicted+Observed

Category          p-value In Category from Cluster          k          f

 

 

 

Deletions Consortium (Essentiality, Morphology)

Category          p-value In Category from Cluster          k          f

 

 

 

Yeast Fitness Data

Category          p-value In Category from Cluster          k          f

 

 

 

Published Complexes

Category          p-value In Category from Cluster          k          f

 

(go back to top)


Rap1-LiebChIP-alldata.FunSpec.txt

Input Cluster (n=422)

YAL033W       POP5

YAL034C        FUN19

YAL038W       CDC19

YAL039C        CYC3

YAL051W       OAF1

YBL020W       RFT1

YBL021C        HAP3

YBL022C        PIM1

YBL027W       RPL19B

YBL028C

YBL029C-A

YBL029W

YBL060W

YBL061C        SKT5

YBL069W       AST1

YBL071W-A   KTI11

YBL072C        RPS8A

YBL074C        AAR2

YBL081W

YBL082C        RHK1

YBL087C        RPL23A

YBL092W       RPL32

YBL093C        ROX3

YBL108C-A

YBL111C

YBR046C        ZTA1

YBR047W

YBR048W       RPS11B

YBR084C-A   RPL19A

YBR085W       AAC3

YBR117C        TKL2

YBR118W       TEF2

YBR179C        FZO1

YBR180W       DTR1

YBR181C        RPS6B

YBR188C        NTC20

YBR189W       RPS9B

YBR191W       RPL21A

YCL024W       KCC4

YCL025C        AGP1

YCL030C        HIS4

YCL036W       GFD2

YCL037C        SRO9

YCR024C-A   PMP1

YCR031C       RPS14A

YCR095C

YCR096C       HMRA2

YCR097W      HMRA1

YDL021W       GPM2

YDL022W       GPD1

YDL035C        GPR1

YDL055C        PSA1

YDL060W       TSR1

YDL061C        RPS29B

YDL075W       RPL31A

YDL076C        RXT3

YDL082W       RPL13A

YDL083C        RPS16B

YDL130W       RPP1B

YDL130W-A  STF1

YDL133C-A   RPL41B

YDL133W

YDL136W       RPL35B

YDL168W       SFA1

YDL169C        UGX2

YDL184C        RPL41A

YDL186W

YDL188C        PPH22

YDL191W       RPL35A

YDL229W       SSB1

YDR025W      RPS11A

YDR036C

YDR037W      KRS1

YDR040C       ENA1

YDR041W      RSM10

YDR042C

YDR063W

YDR064W      RPS13

YDR186C

YDR188W      CCT6

YDR276C       PMP3

YDR300C       PRO1

YDR301W      CFT1

YDR324C       UTP4

YDR325W      YCG1

YDR393W      SHE9

YDR408C       ADE8

YDR409W      SIZ1

YDR447C       RPS17B

YDR448W      ADA2

YDR449C       UTP6

YDR450W      RPS18A

YDR470C       UGO1

YDR471W      RPL27B

YDR500C       RPL37B

YDR501W      PLM2

YDR541C

YDR542W

YDR545W      YRF1-1

YEL007W

YEL009C        GCN4

YEL022W       GEA2

YEL023C

YEL034W       HYP2

YEL035C        UTR5

YEL036C        ANP1

YEL054C        RPL12A

YEL056W       HAT2

YEL057C

YEL072W       RMD6

YEL073C

YEL075C

YER031C        YPT31

YER032W       FIR1

YER033C        ZRG8

YER034W

YER045C        ACA1

YER046W       SPO73

YER056C-A    RPL34A

YER074W       RPS24A

YER101C        AST2

YER102W       RPS8B

YER116C        SLX8

YER117W       RPL23B

YER130C

YER131W       RPS26B

YER168C        CCA1

YER169W       RPH1

YER189W

YER190W       YRF1-2

YFL014W       HSP12

YFL016C        MDJ1

YFL021W       GAT1

YFL022C        FRS2

YFL023W       BUD27

YFL024C        EPL1

YFL034C-A    RPL22B

YFL034W

YFL051C

YFR017C

YFR031C-A    RPL2A

YGL030W       RPL30

YGL031C        RPL24A

YGL071W       RCS1

YGL073W       HSF1

YGL075C        MPS2

YGL076C        RPL7A

YGL083W       SCY1

YGL084C        GUP1

YGL103W       RPL28

YGL104C        VPS73

YGL115W       SNF4

YGL123W       RPS2

YGL124C        MON1

YGL135W       RPL1B

YGL136C        MRM2

YGL141W       HUL5

YGL142C        GPI10

YGL189C        RPS26A

YGL258W       VEL1

YGL258W-A

YGL263W       COS12

YGR027C       RPS25A

YGR033C

YGR034W      RPL26B

YGR084C       MRP13

YGR085C       RPL11B

YGR117C

YGR118W      RPS23A

YGR148C       RPL24B

YGR149W

YGR159C       NSR1

YGR180C       RNR4

YGR192C       TDH3

YGR213C       RTA1

YGR214W      RPS0A

YGR258C       RAD2

YGR260W      TNA1

YGR283C

YHL001W       RPL14B

YHL015W       RPS20

YHL016C        DUR3

YHL033C        RPL8A

YHL044W

YHL046C

YHR009C

YHR010W      RPL27A

YHR021C       RPS27B

YHR021W-A  ECM12

YHR033W

YHR091C       MSR1

YHR096C       HXT5

YHR122W

YHR203C       RPS4B

YHR204W      MNL1

YHR218W

YIL018W        RPL2B

YIL052C         RPL34B

YIL053W        RHR2

YIL055C

YIL121W

YIL133C         RPL16A

YIL148W        RPL40A

YIL149C         MLP2

YIR016W

YJL026W        RNR2

YJL027C

YJL029C         VPS53

YJL049W

YJL089W        SIP4

YJL090C         DPB11

YJL133W        MRS3

YJL134W        LCB3

YJL136C         RPS21B

YJL177W        RPL17B

YJL178C

YJL189W        RPL39

YJL190C         RPS22A

YJL191W        RPS14B

YJL192C

YJR058C         APS2

YJR059W        PTK2

YJR094C         IME1

YJR094W-A   RPL43B

YJR123W        RPS5

YJR132W        NMD5

YJR134C         SGM1

YJR139C         HOM6

YJR145C         RPS4A

YJR147W        HMS2

YKL006C-A   SFT1

YKL006W      RPL14A

YKL039W      PTM1

YKL040C       NFU1

YKL156W      RPS27A

YKL175W      ZRT3

YKL176C       LST4

YKL178C       STE3

YKL180W      RPL17A

YKL224C

YKR057W      RPS21A

YKR092C       SRP40

YKR093W      PTR2

YKR094C       RPL40B

YKR095W      MLP1

YKR102W      FLO10

YLL039C        UBI4

YLL043W       FPS1

YLL045C        RPL8B

YLL064C

YLL066C

YLR044C        PDC1

YLR047C

YLR048W       RPS0B

YLR061W       RPL22A

YLR074C        BUD20

YLR075W       RPL10

YLR103C        CDC45

YLR104W

YLR166C        SEC10

YLR167W       RPS31

YLR183C        TOS4

YLR185W       RPL37A

YLR254C

YLR256W       HAP1

YLR286C        CTS1

YLR287C

YLR287C-A    RPS30A

YLR310C        CDC25

YLR333C        RPS25B

YLR335W       NUP2

YLR337C        VRP1

YLR340W       RPP0

YLR344W       RPL26A

YLR368W       MDM30

YLR387C

YLR388W       RPS29A

YLR389C        STE23

YLR390W       ECM19

YLR390W-A   CCW14

YLR399C        BDF1

YLR401C

YLR403W       SFP1

YLR437C

YLR438W       CAR2

YLR441C        RPS1A

YLR447C        VMA6

YLR448W       RPL6B

YLR460C

YLR461W       PAU4

YLR462W

YML024W      RPS17A

YML025C

YML026C       RPS18B

YML063W      RPS1B

YML064C       TEM1

YML073C       RPL6A

YML088W      UFO1

YML091C       RPM2

YMR013C       SEC59

YMR013W-A

YMR014W      BUD22

YMR015C       ERG5

YMR081C       ISF1

YMR083W      ADH3

YMR099C

YMR100W      MUB1

YMR116C       ASC1

YMR142C       RPL13B

YMR143W      RPS16A

YMR144W

YMR194W      RPL36A

YMR224C       MRE11

YMR229C       RRP5

YMR230W      RPS10B

YMR231W      PEP5

YMR242C       RPL20A

YMR243C       ZRC1

YMR244W

YMR265C

YMR266W      RSN1

YMR325W

YNL010W

YNL011C

YNL066W      SUN4

YNL067W      RPL9B

YNL068C       FKH2

YNL069C       RPL16B

YNL096C       RPS7B

YNL101W

YNL154C       YCK2

YNL162W      RPL42A

YNL162W-A

YNL163C       RIA1

YNL178W      RPS3

YNL180C       RHO5

YNL190W

YNL201C       PSY2

YNL216W      RAP1

YNL253W

YNL254C

YNL288W      CAF40

YNL302C       RPS19B

YNL329C       PEX6

YNL336W      COS1

YNL339C       YRF1-6

YNR069C

YNR070W      PDR18

YOL039W      RPP2A

YOL040C       RPS15

YOL059W      GPD2

YOL060C       MAM3

YOL082W      CVT19

YOL084W      PHM7

YOL086C       ADH1

YOL109W

YOL121C       RPS19A

YOL127W      RPL25

YOL128C       YGK3

YOL136C       PFK27

YOR043W      WHI2

YOR056C       NOB1

YOR057W      SGT1

YOR095C       RKI1

YOR096W      RPS7A

YOR100C       CRC1

YOR101W      RAS1

YOR124C       UBP2

YOR161C

YOR179C

YOR234C       RPL33B

YOR236W      DFR1

YOR292C

YOR293W      RPS10A

YOR302W

YOR303W      CPA1

YOR312C       RPL20B

YOR340C       RPA43

YOR341W      RPA190

YOR342C

YOR344C       TYE7

YOR354C       MSC6

YOR355W      GDS1

YOR359W      VTS1

YOR365C

YOR367W      SCP1

YOR369C       RPS12

YOR387C

YPL016W       SWI1

YPL017C

YPL079W       RPL21B

YPL081W       RPS9A

YPL082C        MOT1

YPL090C        RPS6A

YPL095C

YPL131W       RPL5

YPL144W

YPL145C        KES1

YPL162C

YPL189W       GUP2

YPL190C        NAB3

YPL198W       RPL7B

YPL199C

YPL220W       RPL1A

YPL226W       NEW1

YPL227C        ALG5

YPL249C-A    RPL36B

YPR029C        APL4

YPR030W       CSR2

YPR042C        PUF2

YPR043W       RPL43A

YPR080W       TEF1

YPR102C        RPL11A

YPR103W       PRE2

YPR105C        COG4

YPR106W       ISR1

YPR110C        RPC40

YPR111W       DBF20

YPR131C        NAT3

YPR132W       RPS23B

YPR161C        SGV1

YPR202W

 

Genes Not Found:

 

LSR1

SNR17A

SNR34

SNR39B

SNR40

SNR47

SNR62

SNR72

SNR73

SNR74

SNR75

SNR76

SNR77

SNR78

TE%28UUC%29L

TK%28UUU%29D

TL%28UAA%29B1

TM%28CAU%29J1

TP%28AGG%29C

TP%28UGG%29O3

TR%28CCG%29L

TT%28AGU%29C

YBL071C-B

YCR024C-B

YER188C-A

YGL188C-A

YGR027W-A

YGR027W-B

YHL015W-A

YJL133C-A

YLR264C-A

YMR230W-A

YMR242W-A

YNL024C-A

YNL067W-B

YOR161C-C

YOR343W-A

YOR343W-B

YPL189C-A

MIPS Functional Classification

Category          p-value In Category from Cluster          k          f

ribosome biogenesis      1e-14   RPL19B RPS8A RPL23A RPL32 RPS11B RPL19A RPS6B RPS9B RPL21A RPS14A RPS29B RPL31A RPL13A RPS16B RPP1B RPL41B RPL35B RPL41A RPL35A RPS11A RSM10 RPS13 RPS17B RPS18A RPL27B RPL37B RPL12A RPL34A RPS24A RPS8B RPL23B RPS26B RPL22B RPL2A RPL30 RPL24A RPL7A RPL28 RPS2 RPL1B RPS26A RPS25A RPL26B MRP13 RPL11B RPS23A RPL24B RPS0A RPL14B RPS20 RPL8A RPL27A RPS27B RPS4B RPL2B RPL34B RPL16A RPL40A RPS21B RPL17B RPL39 RPS22A RPS14B RPL43B RPS5 RPS4A RPL14A RPS27A RPL17A RPS21A RPL40B RPL8B RPS0B RPL22A RPL10 RPS31 RPL37A RPS30A RPS25B RPP0 RPL26A RPS29A RPS1A RPL6B RPS17A YML025C RPS18B RPS1B RPL6A ASC1 RPL13B RPS16A RPL36A RPS10B RPL20A RPL9B RPL16B RPS7B RPL42A RPS3 RPS19B RPP2A RPS15 RPS19A RPL25 RPS7A RPL33B RPS10A RPL20B RPS12 RPL21B RPS9A RPS6A RPL5 RPL7B RPL1A RPL36B RPL43A RPL11A RPS23B     120      215

SUBCELLULAR LOCALISATION   1e-14   POP5 CDC19 CYC3 OAF1 RFT1 HAP3 PIM1 RPL19B RPS8A AAR2 RHK1 RPL23A RPL32 ROX3 RPS11B RPL19A AAC3 TKL2 TEF2 FZO1 RPS6B RPS9B RPL21A KCC4 AGP1 PMP1 RPS14A HMRA2 HMRA1 GPD1 GPR1 RPS29B RPL31A RPL13A RPS16B RPP1B STF1 RPL41B RPL35B RPL41A RPL35A SSB1 RPS11A KRS1 ENA1 RPS13 CCT6 PRO1 CFT1 ADE8 RPS17B ADA2 RPS18A RPL27B RPL37B GCN4 GEA2 HYP2 ANP1 RPL12A HAT2 YPT31 RPL34A RPS24A RPS8B RPL23B RPS26B CCA1 MDJ1 GAT1 FRS2 YFL051C RPL30 RPL24A RCS1 HSF1 MPS2 RPL7A RPL28 SNF4 RPS2 RPL1B RPS26A RPS25A RPL26B MRP13 RPL11B RPS23A RPL24B NSR1 RNR4 TDH3 RPS0A RAD2 RPL14B RPS20 DUR3 RPL8A RPL27A RPS27B MSR1 HXT5 RPS4B RPL2B RPL34B RPL16A RPL40A MLP2 RNR2 VPS53 SIP4 DPB11 MRS3 RPS21B RPL17B RPL39 RPS22A RPS14B APS2 IME1 RPL43B RPS5 RPS4A SFT1 RPL14A RPS27A STE3 RPL17A RPS21A SRP40 PTR2 RPL40B MLP1 FLO10 UBI4 RPL8B PDC1 RPS0B RPL10 CDC45 SEC10 RPS31 RPL37A HAP1 CTS1 RPS30A CDC25 RPS25B NUP2 VRP1 RPP0 RPL26A RPS29A BDF1 SFP1 CAR2 RPS1A VMA6 RPL6B RPS17A YML025C RPS18B RPS1B RPL6A RPM2 SEC59 ERG5 ADH3 ASC1 RPL13B RPS16A RPL36A MRE11 RRP5 RPS10B PEP5 RPL20A ZRC1 SUN4 RPL9B FKH2 RPL16B RPS7B YCK2 RPL42A RPS3 RAP1 RPS19B PEX6 RPP2A RPS15 GPD2 ADH1 RPS19A RPL25 RKI1 RPS7A RAS1 UBP2 DFR1 RPS10A YOR302W CPA1 RPL20B RPA43 RPA190 TYE7 RPS12 SWI1 RPL21B RPS9A MOT1 RPS6A RPL5 KES1 NAB3 RPL7B RPL1A ALG5 RPL36B RPL43A TEF1 RPL11A PRE2 RPC40 RPS23B          226            2256

PROTEIN SYNTHESIS          2.9865e-14      RPL19B RPS8A RPL23A RPL32 RPS11B RPL19A TEF2 RPS6B RPS9B RPL21A RPS14A RPS29B RPL31A RPL13A RPS16B RPP1B RPL41B RPL35B RPL41A RPL35A SSB1 RPS11A KRS1 RSM10 RPS13 RPS17B RPS18A RPL27B RPL37B HYP2 RPL12A RPL34A RPS24A RPS8B RPL23B RPS26B FRS2 RPL22B RPL2A RPL30 RPL24A RPL7A RPL28 RPS2 RPL1B RPS26A RPS25A RPL26B MRP13 RPL11B RPS23A RPL24B RPS0A RPL14B RPS20 RPL8A RPL27A RPS27B MSR1 RPS4B RPL2B RPL34B RPL16A RPL40A RPS21B RPL17B RPL39 RPS22A RPS14B RPL43B RPS5 RPS4A RPL14A RPS27A RPL17A RPS21A RPL40B UBI4 RPL8B RPS0B RPL22A RPL10 RPS31 RPL37A RPS30A RPS25B RPP0 RPL26A RPS29A RPS1A RPL6B RPS17A YML025C RPS18B RPS1B RPL6A ASC1 RPL13B RPS16A RPL36A RPS10B RPL20A RPL9B RPL16B RPS7B RPL42A RIA1 RPS3 RAP1 RPS19B RPP2A RPS15 RPS19A RPL25 RPS7A RPL33B RPS10A YOR302W RPL20B RPS12 RPL21B RPS9A RPS6A RPL5 RPL7B RPL1A NEW1 RPL36B RPL43A TEF1 RPL11A RPS23B       132      359

cytoplasm         5.66214e-14    CDC19 RPL19B RPS8A RPL23A RPL32 RPS11B RPL19A TKL2 TEF2 RPS6B RPS9B RPL21A RPS14A GPD1 RPS29B RPL31A RPL13A RPS16B RPP1B RPL41B RPL35B RPL41A RPL35A SSB1 RPS11A KRS1 RPS13 CCT6 PRO1 ADE8 RPS17B RPS18A RPL27B RPL37B HYP2 RPL12A HAT2 RPL34A RPS24A RPS8B RPL23B RPS26B CCA1 FRS2 RPL30 RPL24A RPL7A RPL28 RPS2 RPL1B RPS26A RPS25A RPL26B RPL11B RPS23A RPL24B TDH3 RPS0A RPL14B RPS20 RPL8A RPL27A RPS27B RPS4B RPL2B RPL34B RPL16A RPL40A RNR2 RPS21B RPL17B RPL39 RPS22A RPS14B RPL43B RPS5 RPS4A RPL14A RPS27A RPL17A RPS21A RPL40B UBI4 RPL8B PDC1 RPS0B RPL10 SEC10 RPS31 RPL37A RPS30A RPS25B RPP0 RPL26A RPS29A CAR2 RPS1A RPL6B RPS17A RPS18B RPS1B RPL6A ASC1 RPL13B RPS16A RPL36A RPS10B RPL20A RPL9B RPL16B RPS7B RPL42A RPS3 RPS19B PEX6 RPP2A RPS15 ADH1 RPS19A RPL25 RKI1 RPS7A RAS1 UBP2 DFR1 RPS10A YOR302W CPA1 RPL20B RPS12 RPL21B RPS9A RPS6A RPL5 KES1 RPL7B RPL1A RPL36B RPL43A TEF1 RPL11A RPS23B     142      554

 

 

 

MIPS Phenotypes

Category          p-value In Category from Cluster          k          f

 

 

 

MIPS Subcellular Localization

Category          p-value In Category from Cluster          k          f

cytoplasm         4.92939e-14    CDC19 RPL19B RPS8A RPL23A RPL32 RPS11B RPL19A TKL2 TEF2 RPS6B RPS9B RPL21A SRO9 RPS14A GPD1 RPS29B RPL31A RPL13A RPS16B RPP1B RPL41B RPL35B RPL41A RPL35A SSB1 RPS11A KRS1 RPS13 CCT6 PRO1 ADE8 RPS17B RPS18A RPL27B RPL37B HYP2 RPL12A HAT2 RPL34A RPS24A RPS8B RPL23B RPS26B CCA1 FRS2 RPL30 RPL24A RPL7A RPL28 RPS2 RPL1B RPS26A RPS25A RPL26B RPL11B RPS23A RPL24B TDH3 RPS0A RPL14B RPS20 RPL8A RPL27A RPS27B RPS4B RPL2B RPL34B RPL16A RPL40A RNR2 RPS21B RPL17B RPL39 RPS22A RPS14B RPL43B RPS5 RPS4A RPL14A RPS27A RPL17A RPS21A RPL40B UBI4 RPL8B PDC1 RPS0B RPL22A RPL10 SEC10 RPS31 RPL37A RPS30A RPS25B RPP0 RPL26A RPS29A CAR2 RPS1A RPL6B RPS17A RPS18B RPS1B RPL6A ASC1 RPL13B RPS16A RPL36A RPS10B RPL20A RPL9B RPL16B RPS7B RPL42A RPS3 RPS19B PEX6 RPP2A RPS15 ADH1 RPS19A RPL25 RKI1 RPS7A UBP2 RPL33B DFR1 RPS10A YOR302W CPA1 RPL20B RPS12 RPL21B RPS9A RPS6A RPL5 KES1 RPL7B RPL1A RPL36B RPL43A TEF1 RPL11A RPS23B      144      593

 

 

 

MIPS Protein Complexes

Category          p-value In Category from Cluster          k          f

cytoplasmic ribosomal small subunit       1e-14   RPS8A RPS11B RPS6B RPS9B RPS14A RPS29B RPS16B RPS11A RPS13 RPS17B RPS18A RPS24A RPS8B RPS26B RPS2 RPS26A RPS25A RPS23A RPS0A RPS20 RPS27B RPS4B RPS21B RPS22A RPS14B RPS5 RPS4A RPS27A RPS21A RPS0B RPS31 RPS30A RPS25B RPS29A RPS1A RPS17A RPS18B RPS1B ASC1 RPS16A RPS10B RPS7B RPS3 RPS19B RPS15 RPS19A RPS7A RPS10A RPS12 RPS9A RPS6A RPS23B         52        57

Cytoplasmic ribosomes 1e-14   RPL19B RPS8A RPL23A RPL32 RPS11B RPL19A RPS6B RPS9B RPL21A RPS14A RPS29B RPL31A RPL13A RPS16B RPP1B RPL41B RPL35B RPL41A RPL35A RPS11A RPS13 RPS17B RPS18A RPL27B RPL37B RPL12A RPL34A RPS24A RPS8B RPL23B RPS26B RPL22B RPL2A RPL30 RPL24A RPL7A RPL28 RPS2 RPL1B RPS26A RPS25A RPL26B RPL11B RPS23A RPL24B RPS0A RPL14B RPS20 RPL8A RPL27A RPS27B RPS4B RPL2B RPL34B RPL16A RPL40A RPS21B RPL17B RPL39 RPS22A RPS14B RPL43B RPS5 RPS4A RPL14A RPS27A RPL17A RPS21A RPL40B RPL8B RPS0B RPL22A RPL10 RPS31 RPL37A RPS30A RPS25B RPP0 RPL26A RPS29A RPS1A RPL6B RPS17A RPS18B RPS1B RPL6A ASC1 RPL13B RPS16A RPL36A RPS10B RPL20A RPL9B RPL16B RPS7B RPL42A RPS3 RPS19B RPP2A RPS15 RPS19A RPL25 RPS7A RPL33B RPS10A RPL20B RPS12 RPL21B RPS9A RPS6A RPL5 RPL7B RPL1A RPL36B RPL43A RPL11A RPS23B        117      138

cytoplasmic ribosomal large subunit       1e-14   RPL19B RPL23A RPL32 RPL19A RPL21A RPL31A RPL13A RPP1B RPL41B RPL35B RPL41A RPL35A RPL27B RPL37B RPL12A RPL34A RPL23B RPL22B RPL2A RPL30 RPL24A RPL7A RPL28 RPL1B RPL26B RPL11B RPL24B RPL14B RPL8A RPL27A RPL2B RPL34B RPL16A RPL40A RPL17B RPL39 RPL43B RPL14A RPL17A RPL40B RPL8B RPL22A RPL10 RPL37A RPP0 RPL26A RPL6B RPL6A RPL13B RPL36A RPL20A RPL9B RPL16B RPL42A RPP2A RPL25 RPL33B RPL20B RPL21B RPL5 RPL7B RPL1A RPL36B RPL43A RPL11A    65        81

Translation complexes   1.95399e-14    RPL19B RPS8A RPL23A RPL32 RPS11B RPL19A TEF2 RPS6B RPS9B RPL21A RPS14A RPS29B RPL31A RPL13A RPS16B RPP1B RPL41B RPL35B RPL41A RPL35A RPS11A RPS13 RPS17B RPS18A RPL27B RPL37B HYP2 RPL12A RPL34A RPS24A RPS8B RPL23B RPS26B RPL22B RPL2A RPL30 RPL24A RPL7A RPL28 RPS2 RPL1B RPS26A RPS25A RPL26B MRP13 RPL11B RPS23A RPL24B RPS0A RPL14B RPS20 RPL8A RPL27A RPS27B RPS4B RPL2B RPL34B RPL16A RPL40A RPS21B RPL17B RPL39 RPS22A RPS14B RPL43B RPS5 RPS4A RPL14A RPS27A RPL17A RPS21A RPL40B RPL8B RPS0B RPL22A RPL10 RPS31 RPL37A RPS30A RPS25B RPP0 RPL26A RPS29A RPS1A RPL6B RPS17A RPS18B RPS1B RPL6A ASC1 RPL13B RPS16A RPL36A RPS10B RPL20A RPL9B RPL16B RPS7B RPL42A RPS3 RPS19B RPP2A RPS15 RPS19A RPL25 RPS7A RPL33B RPS10A RPL20B RPS12 RPL21B RPS9A RPS6A RPL5 RPL7B RPL1A RPL36B RPL43A TEF1 RPL11A RPS23B       121      240

 

 

 

MIPS Protein Classes

Category          p-value In Category from Cluster          k          f

 

 

 

GO Molecular Function

Category          p-value In Category from Cluster          k          f

structural constituent of ribosome [GO:0003735]          1e-14   RPL19B RPS8A RPL23A RPL32 RPS11B RPL19A RPS6B RPS9B RPL21A RPS14A RPS29B RPL31A RPL13A RPS16B RPP1B RPL41B RPL35B RPL41A RPL35A RPS11A RSM10 RPS13 RPS17B RPS18A RPL27B RPL37B RPL12A RPL34A RPS24A RPS8B RPL23B RPS26B RPL22B RPL2A RPL30 RPL24A RPL7A RPL28 RPS2 RPL1B RPS26A RPS25A RPL26B MRP13 RPL11B RPS23A RPL24B RPS0A RPL14B RPS20 RPL8A RPL27A RPS27B RPS4B RPL2B RPL34B RPL16A RPL40A RPS21B RPL17B RPL39 RPS22A RPS14B RPL43B RPS5 RPS4A RPL14A RPS27A RPL17A RPS21A RPL40B RPL8B RPS0B RPL22A RPL10 RPS31 RPL37A RPS30A RPS25B RPP0 RPL26A RPS29A RPS1A RPL6B RPS17A YML025C RPS18B RPS1B RPL6A RPL13B RPS16A RPL36A RPS10B RPL20A RPL9B RPL16B RPS7B RPL42A RPS3 RPS19B RPP2A RPS15 RPS19A RPL25 RPS7A RPL33B RPS10A RPL20B RPS12 RPL21B RPS9A RPS6A RPL5 RPL7B RPL1A RPL36B RPL43A RPL11A RPS23B   119      206

structural molecule [GO:0005198]        2.58682e-14    RPL19B RPS8A RPL23A RPL32 RPS11B RPL19A RPS6B RPS9B RPL21A RPS14A RPS29B RPL31A RPL13A RPS16B RPP1B RPL41B RPL35B RPL41A RPL35A RPS11A RSM10 RPS13 RPS17B RPS18A RPL27B RPL37B RPL12A RPL34A RPS24A RPS8B RPL23B RPS26B RPL22B RPL2A RPL30 RPL24A MPS2 RPL7A RPL28 RPS2 RPL1B RPS26A RPS25A RPL26B MRP13 RPL11B RPS23A RPL24B RPS0A RPL14B RPS20 RPL8A RPL27A RPS27B RPS4B RPL2B RPL34B RPL16A RPL40A RPS21B RPL17B RPL39 RPS22A RPS14B RPL43B RPS5 RPS4A RPL14A RPS27A RPL17A RPS21A RPL40B RPL8B RPS0B RPL22A RPL10 RPS31 RPL37A RPS30A RPS25B NUP2 RPP0 RPL26A RPS29A CCW14 RPS1A RPL6B RPS17A YML025C RPS18B RPS1B RPL6A RPL13B RPS16A RPL36A RPS10B RPL20A RPL9B RPL16B RPS7B RPL42A RPS3 RPS19B RPP2A RPS15 RPS19A RPL25 RPS7A RPL33B RPS10A RPL20B RPS12 RPL21B RPS9A RPS6A RPL5 RPL7B RPL1A RPL36B RPL43A RPL11A RPS23B   122      310

 

 

 

GO Biological Process

Category          p-value In Category from Cluster          k          f

protein metabolism [GO:0019538]        1.58762e-14    CYC3 RFT1 PIM1 RPL19B AST1 RPS8A RHK1 RPL23A RPL32 RPS11B RPL19A TEF2 RPS6B RPS9B RPL21A KCC4 SRO9 RPS14A PSA1 RPS29B RPL31A RPL13A RPS16B RPP1B RPL41B RPL35B RPL41A PPH22 RPL35A SSB1 RPS11A KRS1 RSM10 RPS13 CCT6 SIZ1 RPS17B ADA2 RPS18A RPL27B RPL37B GEA2 HYP2 ANP1 RPL12A YPT31 RPL34A RPS24A RPS8B RPL23B RPS26B CCA1 MDJ1 FRS2 EPL1 RPL22B RPL2A RPL30 RPL24A RPL7A RPL28 VPS73 RPS2 MON1 RPL1B HUL5 GPI10 RPS26A RPS25A RPL26B MRP13 RPL11B RPS23A RPL24B RPS0A RPL14B RPS20 RPL8A RPL27A RPS27B MSR1 RPS4B MNL1 RPL2B RPL34B RPL16A RPL40A MLP2 VPS53 RPS21B RPL17B RPL39 RPS22A RPS14B RPL43B RPS5 NMD5 RPS4A SFT1 RPL14A RPS27A LST4 RPL17A RPS21A RPL40B MLP1 UBI4 RPL8B RPS0B RPL22A RPL10 SEC10 RPS31 RPL37A RPS30A RPS25B NUP2 RPP0 RPL26A RPS29A STE23 RPS1A RPL6B RPS17A YML025C RPS18B RPS1B RPL6A UFO1 RPM2 SEC59 RPL13B RPS16A RPL36A RPS10B PEP5 RPL20A RPL9B RPL16B RPS7B YCK2 RPL42A RPS3 RPS19B RPP2A RPS15 CVT19 RPS19A RPL25 YGK3 NOB1 RPS7A UBP2 RPL33B RPS10A RPL20B VTS1 RPS12 RPL21B RPS9A RPS6A RPL5 RPL7B RPL1A ALG5 RPL36B RPL43A TEF1 RPL11A PRE2 COG4 DBF20 NAT3 RPS23B SGV1           175            1168

protein biosynthesis [GO:0006412]       2.9643e-14      RFT1 RPL19B RPS8A RHK1 RPL23A RPL32 RPS11B RPL19A TEF2 RPS6B RPS9B RPL21A SRO9 RPS14A PSA1 RPS29B RPL31A RPL13A RPS16B RPP1B RPL41B RPL35B RPL41A PPH22 RPL35A SSB1 RPS11A KRS1 RSM10 RPS13 RPS17B RPS18A RPL27B RPL37B HYP2 ANP1 RPL12A RPL34A RPS24A RPS8B RPL23B RPS26B CCA1 FRS2 RPL22B RPL2A RPL30 RPL24A RPL7A RPL28 RPS2 RPL1B GPI10 RPS26A RPS25A RPL26B MRP13 RPL11B RPS23A RPL24B RPS0A RPL14B RPS20 RPL8A RPL27A RPS27B MSR1 RPS4B RPL2B RPL34B RPL16A RPL40A RPS21B RPL17B RPL39 RPS22A RPS14B RPL43B RPS5 RPS4A RPL14A RPS27A RPL17A RPS21A RPL40B RPL8B RPS0B RPL22A RPL10 RPS31 RPL37A RPS30A RPS25B RPP0 RPL26A RPS29A RPS1A RPL6B RPS17A YML025C RPS18B RPS1B RPL6A RPM2 SEC59 RPL13B RPS16A RPL36A RPS10B RPL20A RPL9B RPL16B RPS7B RPL42A RPS3 RPS19B RPP2A RPS15 RPS19A RPL25 RPS7A RPL33B RPS10A RPL20B RPS12 RPL21B RPS9A RPS6A RPL5 RPL7B RPL1A ALG5 RPL36B RPL43A TEF1 RPL11A RPS23B     137      415

macromolecule biosynthesis [GO:0009059]      3.08642e-14    RFT1 RPL19B SKT5 RPS8A RHK1 RPL23A RPL32 RPS11B RPL19A TEF2 RPS6B RPS9B RPL21A SRO9 RPS14A PSA1 RPS29B RPL31A RPL13A RPS16B RPP1B RPL41B RPL35B RPL41A PPH22 RPL35A SSB1 RPS11A KRS1 RSM10 RPS13 RPS17B RPS18A RPL27B RPL37B HYP2 ANP1 RPL12A RPL34A RPS24A RPS8B RPL23B RPS26B CCA1 FRS2 RPL22B RPL2A RPL30 RPL24A RPL7A RPL28 RPS2 RPL1B GPI10 RPS26A RPS25A RPL26B MRP13 RPL11B RPS23A RPL24B RPS0A RPL14B RPS20 RPL8A RPL27A RPS27B MSR1 RPS4B RPL2B RPL34B RPL16A RPL40A RPS21B RPL17B RPL39 RPS22A RPS14B RPL43B RPS5 RPS4A RPL14A RPS27A RPL17A RPS21A RPL40B RPL8B RPS0B RPL22A RPL10 RPS31 RPL37A RPS30A RPS25B RPP0 RPL26A RPS29A RPS1A RPL6B RPS17A YML025C RPS18B RPS1B RPL6A RPM2 SEC59 RPL13B RPS16A RPL36A RPS10B RPL20A RPL9B RPL16B RPS7B RPL42A RPS3 RPS19B RPP2A RPS15 RPS19A RPL25 RPS7A RPL33B RPS10A RPL20B RPS12 RPL21B RPS9A RPS6A RPL5 RPL7B RPL1A ALG5 RPL36B RPL43A TEF1 RPL11A RPS23B      138      422

biosynthesis [GO:0009058]      1.03917e-13    RFT1 RPL19B SKT5 RPS8A RHK1 RPL23A RPL32 RPS11B RPL19A TEF2 RPS6B RPS9B RPL21A HIS4 SRO9 RPS14A GPM2 PSA1 RPS29B RPL31A RPL13A RPS16B RPP1B RPL41B RPL35B RPL41A PPH22 RPL35A SSB1 RPS11A KRS1 RSM10 RPS13 PRO1 ADE8 RPS17B RPS18A RPL27B RPL37B GCN4 HYP2 ANP1 RPL12A RPL34A RPS24A RPS8B RPL23B RPS26B CCA1 FRS2 RPL22B RPL2A RPL30 RPL24A RPL7A RPL28 RPS2 RPL1B GPI10 RPS26A RPS25A RPL26B MRP13 RPL11B RPS23A RPL24B TDH3 RPS0A RPL14B RPS20 RPL8A RPL27A RPS27B MSR1 RPS4B RPL2B RPL34B RHR2 RPL16A RPL40A SIP4 LCB3 RPS21B RPL17B RPL39 RPS22A RPS14B RPL43B RPS5 RPS4A RPL14A RPS27A RPL17A RPS21A RPL40B RPL8B RPS0B RPL22A RPL10 RPS31 RPL37A RPS30A RPS25B RPP0 RPL26A RPS29A RPS1A RPL6B RPS17A YML025C RPS18B RPS1B RPL6A RPM2 SEC59 ERG5 RPL13B RPS16A RPL36A RPS10B RPL20A RPL9B RPL16B RPS7B RPL42A RPS3 RPS19B RPP2A RPS15 RPS19A RPL25 RPS7A RPL33B RPS10A CPA1 RPL20B RPS12 RPL21B RPS9A RPS6A RPL5 KES1 RPL7B RPL1A ALG5 RPL36B RPL43A TEF1 RPL11A RPS23B        150      731

metabolism [GO:0008152]       5.17053e-12    POP5 CDC19 CYC3 OAF1 RFT1 HAP3 PIM1 RPL19B SKT5 AST1 RPS8A AAR2 RHK1 RPL23A RPL32 ROX3 RPS11B RPL19A TKL2 TEF2 RPS6B NTC20 RPS9B RPL21A KCC4 HIS4 SRO9 RPS14A HMRA2 HMRA1 GPM2 PSA1 RPS29B RPL31A RPL13A RPS16B RPP1B RPL41B RPL35B SFA1 RPL41A PPH22 RPL35A SSB1 RPS11A KRS1 RSM10 RPS13 CCT6 PRO1 CFT1 UTP4 ADE8 SIZ1 RPS17B ADA2 UTP6 RPS18A RPL27B RPL37B GCN4 GEA2 HYP2 ANP1 RPL12A HAT2 YPT31 FIR1 ACA1 RPL34A RPS24A RPS8B SLX8 RPL23B RPS26B CCA1 RPH1 HSP12 MDJ1 GAT1 FRS2 EPL1 RPL22B RPL2A RPL30 RPL24A RCS1 RPL7A GUP1 RPL28 VPS73 SNF4 RPS2 MON1 RPL1B MRM2 HUL5 GPI10 RPS26A RPS25A RPL26B MRP13 RPL11B RPS23A RPL24B NSR1 RNR4 TDH3 RPS0A RAD2 RPL14B RPS20 RPL8A RPL27A RPS27B MSR1 RPS4B MNL1 RPL2B RPL34B RHR2 RPL16A RPL40A MLP2 RNR2 VPS53 SIP4 DPB11 MRS3 LCB3 RPS21B RPL17B RPL39 RPS22A RPS14B RPL43B RPS5 NMD5 HOM6 RPS4A SFT1 RPL14A RPS27A LST4 RPL17A RPS21A RPL40B MLP1 UBI4 RPL8B PDC1 RPS0B RPL22A RPL10 CDC45 SEC10 RPS31 RPL37A HAP1 RPS30A RPS25B NUP2 RPP0 RPL26A RPS29A STE23 YLR401C CAR2 RPS1A RPL6B RPS17A YML025C RPS18B RPS1B RPL6A UFO1 RPM2 SEC59 ERG5 ISF1 ADH3 RPL13B RPS16A RPL36A MRE11 RRP5 RPS10B PEP5 RPL20A ZRC1 RPL9B FKH2 RPL16B RPS7B YCK2 RPL42A RPS3 RAP1 CAF40 RPS19B RPP2A RPS15 GPD2 CVT19 ADH1 RPS19A RPL25 YGK3 PFK27 NOB1 RKI1 RPS7A CRC1 UBP2 RPL33B DFR1 RPS10A CPA1 RPL20B RPA43 RPA190 TYE7 MSC6 GDS1 VTS1 RPS12 SWI1 RPL21B RPS9A MOT1 RPS6A RPL5 KES1 NAB3 RPL7B RPL1A ALG5 RPL36B PUF2 RPL43A TEF1 RPL11A PRE2 COG4 RPC40 DBF20 NAT3 RPS23B SGV1            249      2693

ribosomal subunit assembly [GO:0042257]       6.82432e-12    RPS11B RPS14A RPS11A RPS17B RPL12A RPL11B NSR1 RPS0A RPS14B RPS0B RPL10 RPS31 RPP0 RPL6B RPS17A YML025C RPL6A RPL25 RPL5 RPL11A 20            48

ribosome assembly [GO:0042255]       1.69389e-11    RPS11B RPS14A RPS11A RPS17B RPL12A RPL11B NSR1 RPS0A RPS14B RPS0B RPL10 RPS31 RPP0 RPL6B RPS17A YML025C RPL6A RPL25 RPL5 RPL11A            20            50

ribosomal small subunit assembly and maintenance [GO:0000028]         4.1206e-10      RPS11B RPS14A RPS11A RPS17B NSR1 RPS0A RPS14B RPS0B RPS31 RPS17A     10        13

cell growth and/or maintenance [GO:0008151] 1.13437e-09    POP5 CDC19 CYC3 OAF1 RFT1 HAP3 PIM1 RPL19B SKT5 AST1 KTI11 RPS8A AAR2 RHK1 RPL23A RPL32 ROX3 RPS11B RPL19A AAC3 TKL2 TEF2 FZO1 RPS6B NTC20 RPS9B RPL21A KCC4 AGP1 HIS4 SRO9 PMP1 RPS14A HMRA2 HMRA1 GPM2 GPD1 GPR1 PSA1 TSR1 RPS29B RPL31A RPL13A RPS16B RPP1B STF1 RPL41B RPL35B SFA1 RPL41A PPH22 RPL35A SSB1 RPS11A YDR036C KRS1 ENA1 RSM10 RPS13 CCT6 PMP3 PRO1 CFT1 UTP4 YCG1 SHE9 ADE8 SIZ1 RPS17B ADA2 UTP6 RPS18A UGO1 RPL27B RPL37B GCN4 GEA2 HYP2 ANP1 RPL12A HAT2 YPT31 FIR1 ACA1 SPO73 RPL34A RPS24A RPS8B SLX8 RPL23B RPS26B CCA1 RPH1 HSP12 MDJ1 GAT1 FRS2 BUD27 EPL1 RPL22B RPL2A RPL30 RPL24A RCS1 HSF1 MPS2 RPL7A GUP1 RPL28 VPS73 SNF4 RPS2 MON1 RPL1B MRM2 HUL5 GPI10 RPS26A RPS25A RPL26B MRP13 RPL11B RPS23A RPL24B NSR1 RNR4 TDH3 RPS0A RAD2 TNA1 RPL14B RPS20 DUR3 RPL8A RPL27A RPS27B ECM12 MSR1 HXT5 RPS4B MNL1 RPL2B RPL34B RHR2 RPL16A RPL40A MLP2 RNR2 VPS53 SIP4 DPB11 MRS3 LCB3 RPS21B RPL17B RPL39 RPS22A RPS14B APS2 PTK2 IME1 RPL43B RPS5 NMD5 HOM6 RPS4A HMS2 SFT1 RPL14A NFU1 RPS27A ZRT3 LST4 STE3 RPL17A RPS21A SRP40 PTR2 RPL40B MLP1 UBI4 FPS1 RPL8B PDC1 RPS0B RPL22A BUD20 RPL10 CDC45 SEC10 RPS31 RPL37A HAP1 CTS1 RPS30A CDC25 RPS25B NUP2 VRP1 RPP0 RPL26A MDM30 RPS29A STE23 ECM19 CCW14 BDF1 YLR401C SFP1 CAR2 RPS1A VMA6 RPL6B RPS17A YML025C RPS18B RPS1B TEM1 RPL6A UFO1 RPM2 SEC59 BUD22 ERG5 ISF1 ADH3 MUB1 RPL13B RPS16A RPL36A MRE11 RRP5 RPS10B PEP5 RPL20A ZRC1 SUN4 RPL9B FKH2 RPL16B RPS7B YCK2 RPL42A RIA1 RPS3 RAP1 CAF40 RPS19B PEX6 RPP2A RPS15 GPD2 MAM3 CVT19 ADH1 RPS19A RPL25 YGK3 PFK27 WHI2 NOB1 SGT1 RKI1 RPS7A CRC1 RAS1 UBP2 RPL33B DFR1 RPS10A CPA1 RPL20B RPA43 RPA190 TYE7 MSC6 GDS1 VTS1 RPS12 SWI1 RPL21B RPS9A MOT1 RPS6A RPL5 KES1 NAB3 RPL7B RPL1A ALG5 RPL36B APL4 CSR2 PUF2 RPL43A TEF1 RPL11A PRE2 COG4 RPC40 DBF20 NAT3 RPS23B SGV1 304            3657

regulation of translational fidelity [GO:0006450]            5.99103e-09    RPS11B RPS9B RPS11A RPS2 RPS23A RPS9A RPS23B           7          7

ribosome biogenesis and assembly [GO:0042254]        1.22363e-05    POP5 RPS11B RPS14A TSR1 RPS11A UTP4 RPS17B UTP6 RPL12A RPL30 RPL11B NSR1 RPS0A RPS14B RPS0B RPL10 RPS31 RPP0 RPL6B RPS17A YML025C RPL6A RRP5 RIA1 RPL25 RPL5 RPL11A          27        165

 

 

 

GO Cellular Component

Category          p-value In Category from Cluster          k          f

eukaryotic 48S initiation complex [GO:0016283]          1e-14   RPS8A RPS11B RPS6B RPS9B RPS14A RPS29B RPS16B RPS11A RPS13 RPS17B RPS18A RPS24A RPS8B RPS26B RPS2 RPS26A RPS25A RPS23A RPS0A RPS20 RPS27B RPS4B RPS21B RPS22A RPS14B RPS5 RPS4A RPS27A RPS21A RPS0B RPS31 RPS30A RPS25B RPS29A RPS1A RPS17A RPS18B RPS1B RPS16A RPS10B RPS7B RPS3 RPS19B RPS15 RPS19A RPS7A RPS10A RPS12 RPS9A RPS6A RPS23B      51        61

cytosolic small ribosomal subunit (sensu Eukarya) [GO:0005843]          1e-14   RPS8A RPS11B RPS6B RPS9B RPS14A RPS29B RPS16B RPS11A RPS13 RPS17B RPS18A RPS24A RPS8B RPS26B RPS2 RPS26A RPS25A RPS23A RPS0A RPS20 RPS27B RPS4B RPS21B RPS22A RPS14B RPS5 RPS4A RPS27A RPS21A RPS0B RPS31 RPS30A RPS25B RPS29A RPS1A RPS17A RPS18B RPS1B RPS16A RPS10B RPS7B RPS3 RPS19B RPS15 RPS19A RPS7A RPS10A RPS12 RPS9A RPS6A RPS23B      51        61

cytosolic large ribosomal subunit (sensu Eukarya) [GO:0005842]          1e-14   RPL19B RPL23A RPL32 RPL19A RPL21A RPL31A RPL13A RPP1B RPL41B RPL35B RPL41A RPL35A RPL27B RPL37B RPL12A RPL34A RPL23B RPL22B RPL2A RPL30 RPL24A RPL7A RPL28 RPL1B RPL26B RPL11B RPL24B RPL14B RPL8A RPL27A RPL2B RPL34B RPL16A RPL40A RPL17B RPL39 RPL43B RPL14A RPL17A RPL40B RPL8B RPL22A RPL10 RPL37A RPP0 RPL26A RPL6B RPL6A RPL13B RPL36A RPL20A RPL9B RPL16B RPL42A RPP2A RPL25 RPL33B RPL20B RPL21B RPL5 RPL7B RPL1A RPL36B RPL43A RPL11A          65        83

cytosolic ribosome (sensu Eukarya) [GO:0005830]       1e-14   RPL19B RPS8A RPL23A RPL32 RPS11B RPL19A RPS6B RPS9B RPL21A RPS14A RPS29B RPL31A RPL13A RPS16B RPP1B RPL41B RPL35B RPL41A RPL35A RPS11A RPS13 RPS17B RPS18A RPL27B RPL37B RPL12A RPL34A RPS24A RPS8B RPL23B RPS26B RPL22B RPL2A RPL30 RPL24A RPL7A RPL28 RPS2 RPL1B RPS26A RPS25A RPL26B RPL11B RPS23A RPL24B RPS0A RPL14B RPS20 RPL8A RPL27A RPS27B RPS4B RPL2B RPL34B RPL16A RPL40A RPS21B RPL17B RPL39 RPS22A RPS14B RPL43B RPS5 RPS4A RPL14A RPS27A RPL17A RPS21A RPL40B RPL8B RPS0B RPL22A RPL10 RPS31 RPL37A RPS30A RPS25B RPP0 RPL26A RPS29A RPS1A RPL6B RPS17A RPS18B RPS1B RPL6A RPL13B RPS16A RPL36A RPS10B RPL20A RPL9B RPL16B RPS7B RPL42A RPS3 RPS19B RPP2A RPS15 RPS19A RPL25 RPS7A RPL33B RPS10A RPL20B RPS12 RPL21B RPS9A RPS6A RPL5 RPL7B RPL1A RPL36B RPL43A RPL11A RPS23B     116      151

eukaryotic 43S pre-initiation complex [GO:0016282]    1e-14   RPS8A RPS11B RPS6B RPS9B RPS14A RPS29B RPS16B RPS11A RPS13 RPS17B RPS18A RPS24A RPS8B RPS26B RPS2 RPS26A RPS25A RPS23A RPS0A RPS20 RPS27B RPS4B RPS21B RPS22A RPS14B RPS5 RPS4A RPS27A RPS21A RPS0B RPS31 RPS30A RPS25B RPS29A RPS1A RPS17A RPS18B RPS1B RPS16A RPS10B RPS7B RPS3 RPS19B RPS15 RPS19A RPS7A RPS10A RPS12 RPS9A RPS6A RPS23B      51        67

small ribosomal subunit [GO:0015935] 1e-14   RPS8A RPS11B RPS6B RPS9B RPS14A RPS29B RPS16B RPS11A RSM10 RPS13 RPS17B RPS18A RPS24A RPS8B RPS26B RPS2 RPS26A RPS25A MRP13 RPS23A RPS0A RPS20 RPS27B RPS4B RPS21B RPS22A RPS14B RPS5 RPS4A RPS27A RPS21A RPS0B RPS31 RPS30A RPS25B RPS29A RPS1A RPS17A RPS18B RPS1B RPS16A RPS10B RPS7B RPS3 RPS19B RPS15 RPS19A RPS7A RPS10A RPS12 RPS9A RPS6A RPS23B      53        88

large ribosomal subunit [GO:0015934]  1e-14   RPL19B RPL23A RPL32 RPL19A RPL21A RPL31A RPL13A RPP1B RPL41B RPL35B RPL41A RPL35A RPL27B RPL37B RPL12A RPL34A RPL23B RPL22B RPL2A RPL30 RPL24A RPL7A RPL28 RPL1B RPL26B RPL11B RPL24B RPL14B RPL8A RPL27A RPL2B RPL34B RPL16A RPL40A RPL17B RPL39 RPL43B RPL14A RPL17A RPL40B RPL8B RPL22A RPL10 RPL37A RPP0 RPL26A RPL6B YML025C RPL6A RPL13B RPL36A RPL20A RPL9B RPL16B RPL42A RPP2A RPL25 RPL33B RPL20B RPL21B RPL5 RPL7B RPL1A RPL36B RPL43A RPL11A      66        122

ribosome [GO:0005840]          2.14273e-14    RPL19B RPS8A RPL23A RPL32 RPS11B RPL19A TEF2 RPS6B RPS9B RPL21A SRO9 RPS14A RPS29B RPL31A RPL13A RPS16B RPP1B RPL41B RPL35B RPL41A RPL35A SSB1 RPS11A RSM10 RPS13 RPS17B RPS18A RPL27B RPL37B HYP2 RPL12A RPL34A RPS24A RPS8B RPL23B RPS26B RPL22B RPL2A RPL30 RPL24A RPL7A RPL28 RPS2 RPL1B RPS26A RPS25A RPL26B MRP13 RPL11B RPS23A RPL24B RPS0A RPL14B RPS20 RPL8A RPL27A RPS27B RPS4B RPL2B RPL34B RPL16A RPL40A RPS21B RPL17B RPL39 RPS22A RPS14B RPL43B RPS5 RPS4A RPL14A RPS27A RPL17A RPS21A RPL40B RPL8B RPS0B RPL22A RPL10 RPS31 RPL37A RPS30A RPS25B RPP0 RPL26A RPS29A RPS1A RPL6B RPS17A YML025C RPS18B RPS1B RPL6A RPL13B RPS16A RPL36A RPS10B RPL20A RPL9B RPL16B RPS7B RPL42A RPS3 RPS19B RPP2A RPS15 RPS19A RPL25 RPS7A RPL33B RPS10A RPL20B RPS12 RPL21B RPS9A RPS6A RPL5 RPL7B RPL1A RPL36B RPL43A TEF1 RPL11A RPS23B     124      258

cytosol [GO:0005829] 2.58682e-14    CDC19 RPL19B RPS8A RPL23A RPL32 RPS11B RPL19A RPS6B RPS9B RPL21A RPS14A GPM2 RPS29B RPL31A RPL13A RPS16B RPP1B RPL41B RPL35B RPL41A RPL35A RPS11A RPS13 RPS17B RPS18A RPL27B RPL37B RPL12A RPL34A RPS24A RPS8B RPL23B RPS26B RPL22B RPL2A RPL30 RPL24A RPL7A RPL28 RPS2 RPL1B RPS26A RPS25A RPL26B RPL11B RPS23A RPL24B TDH3 RPS0A RPL14B RPS20 RPL8A RPL27A RPS27B RPS4B RPL2B RPL34B RPL16A RPL40A RNR2 RPS21B RPL17B RPL39 RPS22A RPS14B RPL43B RPS5 RPS4A RPL14A RPS27A RPL17A RPS21A RPL40B RPL8B RPS0B RPL22A RPL10 RPS31 RPL37A RPS30A RPS25B RPP0 RPL26A RPS29A RPS1A RPL6B RPS17A RPS18B RPS1B RPL6A RPL13B RPS16A RPL36A RPS10B RPL20A RPL9B RPL16B RPS7B RPL42A RPS3 RPS19B RPP2A RPS15 GPD2 ADH1 RPS19A RPL25 NOB1 RPS7A RPL33B DFR1 RPS10A CPA1 RPL20B VTS1 RPS12 RPL21B RPS9A RPS6A RPL5 RPL7B RPL1A RPL36B RPL43A RPL11A PRE2 RPS23B             127      310

ribonucleoprotein complex [GO:0030529]        3.0087e-14      POP5 RPL19B RPS8A RPL23A RPL32 RPS11B RPL19A TEF2 RPS6B NTC20 RPS9B RPL21A SRO9 RPS14A RPS29B RPL31A RPL13A RPS16B RPP1B RPL41B RPL35B RPL41A RPL35A SSB1 RPS11A RSM10 RPS13 UTP4 RPS17B UTP6 RPS18A RPL27B RPL37B HYP2 RPL12A RPL34A RPS24A RPS8B RPL23B RPS26B RPL22B RPL2A RPL30 RPL24A RPL7A RPL28 RPS2 RPL1B RPS26A RPS25A RPL26B MRP13 RPL11B RPS23A RPL24B RPS0A RPL14B RPS20 RPL8A RPL27A RPS27B RPS4B RPL2B RPL34B RPL16A RPL40A RPS21B RPL17B RPL39 RPS22A RPS14B RPL43B RPS5 RPS4A RPL14A RPS27A RPL17A RPS21A RPL40B RPL8B RPS0B RPL22A RPL10 RPS31 RPL37A RPS30A RPS25B RPP0 RPL26A RPS29A RPS1A RPL6B RPS17A YML025C RPS18B RPS1B RPL6A RPL13B RPS16A RPL36A RRP5 RPS10B RPL20A RPL9B RPL16B RPS7B RPL42A RPS3 RPS19B RPP2A RPS15 RPS19A RPL25 RPS7A RPL33B RPS10A RPL20B RPS12 RPL21B RPS9A RPS6A RPL5 RPL7B RPL1A RPL36B RPL43A TEF1 RPL11A RPS23B        129      380

cytoplasm [GO:0005737]         1.32228e-13    CDC19 CYC3 RFT1 PIM1 RPL19B SKT5 RPS8A RHK1 RPL23A RPL32 RPS11B RPL19A AAC3 TEF2 FZO1 RPS6B RPS9B RPL21A SRO9 RPS14A GPM2 GPD1 PSA1 RPS29B RPL31A RPL13A RPS16B RPP1B STF1 RPL41B RPL35B RPL41A RPL35A SSB1 RPS11A KRS1 RSM10 RPS13 CCT6 SHE9 RPS17B RPS18A UGO1 RPL27B RPL37B GEA2 HYP2 ANP1 RPL12A HAT2 RPL34A RPS24A AST2 RPS8B RPL23B RPS26B CCA1 MDJ1 FRS2 RPL22B RPL2A RPL30 RPL24A RCS1 MPS2 RPL7A RPL28 SNF4 RPS2 RPL1B MRM2 RPS26A RPS25A RPL26B MRP13 RPL11B RPS23A RPL24B TDH3 RPS0A RPL14B RPS20 RPL8A YHR009C RPL27A RPS27B YHR033W MSR1 RPS4B MNL1 RPL2B RPL34B RPL16A RPL40A RNR2 VPS53 MRS3 LCB3 RPS21B RPL17B RPL39 RPS22A RPS14B APS2 RPL43B RPS5 NMD5 RPS4A SFT1 RPL14A NFU1 RPS27A ZRT3 LST4 RPL17A RPS21A RPL40B UBI4 FPS1 RPL8B RPS0B RPL22A RPL10 SEC10 RPS31 RPL37A CTS1 RPS30A CDC25 RPS25B VRP1 RPP0 RPL26A RPS29A YLR437C CAR2 RPS1A VMA6 RPL6B RPS17A YML025C RPS18B RPS1B TEM1 RPL6A RPM2 ERG5 ADH3 ASC1 RPL13B RPS16A RPL36A RPS10B PEP5 RPL20A ZRC1 SUN4 RPL9B RPL16B RPS7B RPL42A RIA1 RPS3 RPS19B PEX6 RPP2A RPS15 GPD2 CVT19 ADH1 RPS19A RPL25 PFK27 NOB1 RPS7A CRC1 UBP2 RPL33B DFR1 RPS10A CPA1 RPL20B VTS1 RPS12 RPL21B RPS9A RPS6A RPL5 RPL7B RPL1A ALG5 RPL36B APL4 RPL43A TEF1 RPL11A PRE2 COG4 RPS23B           199      1810

intracellular [GO:0005622]       5.50133e-11    POP5 CDC19 CYC3 OAF1 RFT1 HAP3 PIM1 RPL19B SKT5 RPS8A RHK1 RPL23A RPL32 ROX3 RPS11B RPL19A AAC3 TEF2 FZO1 RPS6B NTC20 RPS9B RPL21A AGP1 SRO9 RPS14A HMRA1 GPM2 GPD1 GPR1 PSA1 TSR1 RPS29B RPL31A RPL13A RPS16B RPP1B STF1 RPL41B RPL35B RPL41A RPL35A SSB1 RPS11A KRS1 ENA1 RSM10 RPS13 CCT6 PMP3 CFT1 UTP4 YCG1 SHE9 SIZ1 RPS17B ADA2 UTP6 RPS18A UGO1 RPL27B RPL37B GCN4 GEA2 HYP2 ANP1 RPL12A HAT2 ACA1 RPL34A RPS24A AST2 RPS8B SLX8 RPL23B RPS26B CCA1 RPH1 MDJ1 GAT1 FRS2 EPL1 RPL22B RPL2A RPL30 RPL24A RCS1 HSF1 MPS2 RPL7A RPL28 SNF4 RPS2 RPL1B MRM2 RPS26A RPS25A RPL26B MRP13 RPL11B RPS23A RPL24B NSR1 RNR4 TDH3 RPS0A RAD2 TNA1 RPL14B RPS20 DUR3 RPL8A YHR009C RPL27A RPS27B YHR033W MSR1 HXT5 RPS4B MNL1 RPL2B RPL34B RPL16A RPL40A MLP2 RNR2 VPS53 SIP4 DPB11 MRS3 LCB3 RPS21B RPL17B RPL39 RPS22A RPS14B APS2 IME1 RPL43B RPS5 NMD5 RPS4A SFT1 RPL14A NFU1 RPS27A ZRT3 LST4 STE3 RPL17A RPS21A SRP40 PTR2 RPL40B MLP1 UBI4 FPS1 RPL8B RPS0B RPL22A BUD20 RPL10 CDC45 SEC10 RPS31 RPL37A HAP1 CTS1 RPS30A CDC25 RPS25B NUP2 VRP1 RPP0 RPL26A RPS29A BDF1 SFP1 YLR437C CAR2 RPS1A VMA6 RPL6B RPS17A YML025C RPS18B RPS1B TEM1 RPL6A RPM2 BUD22 ERG5 ADH3 ASC1 RPL13B RPS16A YMR144W RPL36A MRE11 RRP5 RPS10B PEP5 RPL20A ZRC1 SUN4 RPL9B FKH2 RPL16B RPS7B YCK2 RPL42A RIA1 RPS3 RAP1 CAF40 RPS19B PEX6 RPP2A RPS15 GPD2 CVT19 ADH1 RPS19A RPL25 PFK27 NOB1 SGT1 RPS7A CRC1 RAS1 UBP2 RPL33B DFR1 RPS10A CPA1 RPL20B RPA43 RPA190 TYE7 VTS1 RPS12 SWI1 RPL21B RPS9A MOT1 RPS6A RPL5 NAB3 RPL7B RPL1A ALG5 RPL36B APL4 RPL43A TEF1 RPL11A PRE2 COG4 RPC40 RPS23B SGV1            261      2921

cell [GO:0005623]       2.47054e-10    POP5 CDC19 CYC3 OAF1 RFT1 HAP3 PIM1 RPL19B SKT5 AST1 RPS8A RHK1 RPL23A RPL32 ROX3 RPS11B RPL19A AAC3 TEF2 FZO1 RPS6B NTC20 RPS9B RPL21A KCC4 AGP1 HIS4 SRO9 PMP1 RPS14A HMRA1 GPM2 GPD1 GPR1 PSA1 TSR1 RPS29B RPL31A RPL13A RPS16B RPP1B STF1 RPL41B RPL35B RPL41A RPL35A SSB1 RPS11A KRS1 ENA1 RSM10 RPS13 CCT6 PMP3 CFT1 UTP4 YCG1 SHE9 SIZ1 RPS17B ADA2 UTP6 RPS18A UGO1 RPL27B RPL37B GCN4 GEA2 HYP2 ANP1 RPL12A HAT2 ACA1 RPL34A RPS24A AST2 RPS8B SLX8 RPL23B RPS26B CCA1 RPH1 MDJ1 GAT1 FRS2 EPL1 RPL22B RPL2A RPL30 RPL24A RCS1 HSF1 MPS2 RPL7A GUP1 RPL28 SNF4 RPS2 RPL1B MRM2 GPI10 RPS26A RPS25A RPL26B MRP13 RPL11B RPS23A RPL24B NSR1 RNR4 TDH3 RTA1 RPS0A RAD2 TNA1 RPL14B RPS20 DUR3 RPL8A YHR009C RPL27A RPS27B YHR033W MSR1 HXT5 RPS4B MNL1 RPL2B RPL34B RPL16A RPL40A MLP2 RNR2 VPS53 SIP4 DPB11 MRS3 LCB3 RPS21B RPL17B RPL39 RPS22A RPS14B APS2 IME1 RPL43B RPS5 NMD5 RPS4A SFT1 RPL14A NFU1 RPS27A ZRT3 LST4 STE3 RPL17A RPS21A SRP40 PTR2 RPL40B MLP1 UBI4 FPS1 RPL8B RPS0B RPL22A BUD20 RPL10 CDC45 SEC10 RPS31 RPL37A HAP1 CTS1 RPS30A CDC25 RPS25B NUP2 VRP1 RPP0 RPL26A RPS29A STE23 BDF1 SFP1 YLR437C CAR2 RPS1A VMA6 RPL6B RPS17A YML025C RPS18B RPS1B TEM1 RPL6A RPM2 SEC59 BUD22 ERG5 ADH3 ASC1 RPL13B RPS16A YMR144W RPL36A MRE11 RRP5 RPS10B PEP5 RPL20A ZRC1 SUN4 RPL9B FKH2 RPL16B RPS7B YCK2 RPL42A RIA1 RPS3 RAP1 CAF40 RPS19B PEX6 RPP2A RPS15 GPD2 CVT19 ADH1 RPS19A RPL25 PFK27 NOB1 SGT1 RPS7A CRC1 RAS1 UBP2 RPL33B DFR1 RPS10A CPA1 RPL20B RPA43 RPA190 TYE7 VTS1 RPS12 SWI1 RPL21B RPS9A MOT1 RPS6A RPL5 GUP2 NAB3 RPL7B RPL1A ALG5 RPL36B APL4 RPL43A TEF1 RPL11A PRE2 COG4 RPC40 RPS23B SGV1          271      3106

 

 

 

SMART Domains

Category          p-value In Category from Cluster          k          f

 

 

 

PFam-A Domains

Category          p-value In Category from Cluster          k          f

PF00467 (KOW)        4.81011e-09    RPL27B HYP2 RPL26B RPL14B RPL27A RPS4B RPS4A RPL14A RPL26A             9          12

 

 

 

Yeast Two Hybrid - Uetz

Category          p-value In Category from Cluster          k          f

 

 

 

Yeast Two Hybrid - Ito (core)

Category          p-value In Category from Cluster          k          f

 

 

 

Yeast Two Hybrid - Ito (full)

Category          p-value In Category from Cluster          k          f

 

 

 

Synthetic Genetic Array Analysis

Category          p-value In Category from Cluster          k          f

 

 

 

MDS Proteomics Complexes

Category          p-value In Category from Cluster          k          f

YPL022W (RAD1)      9.90968e-05    GPD1 UTP4 YHR033W UBI4 MDM30 CAR2 GPD2           7          18

 

 

 

Cellzome Complexes

Category          p-value In Category from Cluster          k          f

YBR031W (RPL4A)   1e-14   RPL13A RPL27B RPL7A RPL28 RPL11B RPL27A RPL2B RPS14B RPL17A RPL8B RPL10 RPP0 RPL6A RPL13B RPL20A RPL16B RPS3 RPL25 RPL20B RPL7B RPL36B   21        39

 

 

 

Proteome Localization--Observed

Category          p-value In Category from Cluster          k          f

cyto      0.000218432   FUN19 CDC19 OAF1 RPL19B YBL029C-A RPS8A RPL19A TEF2 RPS6B AGP1 HIS4 PMP1 GPM2 GPD1 PSA1 RPL31A RPL13A SFA1 RPL41A PPH22 SSB1 KRS1 YDR186C PRO1 RPS17B RPS18A YEL007W GEA2 HYP2 UTR5 HAT2 ZRG8 YER034W AST2 RPL23B RPS26B YRF1-2 HSP12 FRS2 BUD27 RPL22B YFR017C RPL24A SNF4 RPS2 RPL1B RPS26A RPL26B RPL11B YGR117C RPS23A RPL24B TDH3 RPS20 RPL8A YHR009C YHR033W RPL34B RHR2 RPL16A YIR016W RNR2 YJL027C VPS53 YJL049W MRS3 RPS22A RPS5 HOM6 RPS4A SFT1 RPL14A RPS27A RPL17A UBI4 PDC1 RPL22A RPL10 RPS31 RPL37A YLR287C RPS30A VRP1 RPP0 RPL26A YLR437C CAR2 YLR460C ISF1 YMR099C ASC1 RPS16A YNL010W YNL011C RPL9B RPL16B RPS7B RIA1 RPS3 RPS15 MAM3 PHM7 ADH1 YOL109W RPL25 YGK3 PFK27 WHI2 VTS1 RPS9A RPL5 RPL7B YPL199C CSR2 PUF2 TEF1 RPL11A NAT3 RPS23B             119            1324

 

 

 

Proteome Localization--Predicted+Observed

Category          p-value In Category from Cluster          k          f

cyt        3.49499e-06    FUN19 CDC19 CYC3 OAF1 RPL19B YBL029W YBL060W SKT5 AST1 RPS8A RPL23A RPL32 ZTA1 YBR047W RPS11B AAC3 TKL2 TEF2 FZO1 DTR1 RPS6B RPS9B RPL21A AGP1 HIS4 SRO9 RPS14A GPM2 GPD1 GPR1 PSA1 TSR1 RPS29B RPL31A RXT3 RPL13A RPS16B RPP1B YDL133W RPL35B SFA1 UGX2 RPL41A YDL186W PPH22 RPL35A SSB1 RPS11A KRS1 ENA1 YDR042C YDR063W RPS13 YDR186C CCT6 PMP3 PRO1 ADE8 RPS17B UTP6 RPS18A UGO1 RPL27B RPL37B YDR541C YRF1-1 YEL007W GEA2 YEL023C HYP2 UTR5 RPL12A HAT2 YEL057C RMD6 YEL075C ZRG8 YER034W SPO73 RPS24A AST2 RPS8B SLX8 RPL23B RPS26B YER189W YRF1-2 HSP12 FRS2 BUD27 YFR017C RPL30 RPL24A RPL7A RPL28 RPS2 MON1 RPL1B HUL5 RPS26A COS12 RPS25A YGR033C RPL26B RPL11B YGR117C RPS23A RPL24B TDH3 RPS0A TNA1 RPL14B RPS20 DUR3 RPL8A YHL044W YHR009C RPL27A RPS27B YHR033W HXT5 YHR122W RPS4B MNL1 RPL2B RPL34B RHR2 YIL055C YIL121W RPL16A RPL40A YIR016W RNR2 YJL027C VPS53 YJL049W SIP4 MRS3 RPS21B RPL17B YJL178C RPL39 RPS22A RPS14B RPS5 NMD5 HOM6 RPS4A RPL14A RPS27A RPL17A RPS21A PTR2 RPL40B UBI4 FPS1 RPL8B PDC1 RPS0B RPL22A RPL10 RPS31 RPL37A YLR254C YLR287C RPS25B RPP0 RPL26A MDM30 YLR387C RPS29A STE23 YLR401C YLR437C CAR2 RPS1A VMA6 RPL6B YLR460C RPS17A RPS18B RPS1B RPL6A UFO1 ISF1 YMR099C MUB1 ASC1 RPL13B RPS16A RPL36A RPS10B PEP5 RPL20A YMR265C YNL010W YNL011C RPL9B RPL16B RPS7B YNL101W YCK2 RPL42A RIA1 RPS3 PSY2 CAF40 RPS19B PEX6 YRF1-6 PDR18 RPP2A RPS15 ADH1 YOL109W RPS19A RPL25 YGK3 PFK27 WHI2 SGT1 RKI1 RPS7A CRC1 UBP2 YOR161C YOR179C RPL33B DFR1 YOR292C RPS10A CPA1 RPL20B YOR342C TYE7 VTS1 SCP1 RPS12 YPL017C RPL21B RPS9A RPS6A YPL095C RPL5 KES1 YPL162C RPL7B YPL199C RPL1A NEW1 CSR2 PUF2 RPL43A TEF1 RPL11A PRE2 COG4 DBF20 NAT3 RPS23B YPR202W    261      3210

 

 

 

Deletions Consortium (Essentiality, Morphology)

Category          p-value In Category from Cluster          k          f

Morphology - Clumpy  0.00381356     PIM1 ROX3 SRO9 ANP1 GUP1 CTS1 VRP1           7          31

 

 

 

Yeast Fitness Data

Category          p-value In Category from Cluster          k          f

Slow Growers  1.03795e-05    RPL19B ROX3 RPS11B RPL19A FZO1 RPS6B RPS9B RPL21A RPS29B RPL31A RPL35A RPS11A PMP3 PRO1 RPS18A ANP1 RPL34A RPS24A SLX8 RPL23B MDJ1 BUD27 RCS1 RPL7A GUP1 SNF4 RPL1B RPS23A NSR1 RNR4 RPL27A RPS27B RPS4B VPS53 RPS21B RPL39 RPS4A RPL14A SRP40 PDC1 YLR047C RPL22A BUD20 RPL37A VRP1 BDF1 SFP1 VMA6 RPL6B RPS17A RPS1B RPL6A BUD22 ASC1 RPL13B RPS16A MRE11 RSN1 RPL16B RPS19B ADH1 RPS19A RPS7A RPS10A YPL017C RPS6A RPL43A NAT3 RPS23B        69        617

 

 

 

Published Complexes

Category          p-value In Category from Cluster          k          f

Andersen et al. (2002) - Curr Bio 12:1-            3.32228e-11    RPS6B RPS9B RPL31A RPS11A RPS13 RPL27B HYP2 RPS8B RPL7A RPL28 RPL1B RPL26B RPL11B RPS0A RPL14B RPL2B RPL16A RPS5 RPS4A RPL17A SRP40 UBI4 RPL8B RPL22A RPP0 RPL6B RPS18B RPS1B RPL13B RPS16A RRP5 RPL9B RPL25 RPA190 RPS12 RPL5 RPC40             37        165

Harnicharnpai et al. (2001) - Mol Cell 8:505-   0.00151368     SSB1 RPS2 TDH3 RPS22A RPL10 RPS3 RPS15 RPL5             8          34

 

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Rap1-LiebChIP-2SD.FunSpec.txt

 Input Cluster (n=254)

YAL033W       POP5

YAL034C        FUN19

YBL022C        PIM1

YBL027W       RPL19B

YBL028C

YBL029C-A

YBL029W

YBL060W

YBL061C        SKT5

YBL069W       AST1

YBL071W-A   KTI11

YBL072C        RPS8A

YBL081W

YBL082C        RHK1

YBL092W       RPL32

YBL093C        ROX3

YBR048W       RPS11B

YBR117C        TKL2

YBR118W       TEF2

YBR179C        FZO1

YBR180W       DTR1

YBR181C        RPS6B

YBR188C        NTC20

YBR189W       RPS9B

YCL024W       KCC4

YCL025C        AGP1

YCL030C        HIS4

YCL036W       GFD2

YCL037C        SRO9

YDL022W       GPD1

YDL060W       TSR1

YDL061C        RPS29B

YDL075W       RPL31A

YDL076C        RXT3

YDL082W       RPL13A

YDL083C        RPS16B

YDL130W       RPP1B

YDL133C-A   RPL41B

YDL133W

YDL136W       RPL35B

YDL184C        RPL41A

YDL186W

YDL188C        PPH22

YDL191W       RPL35A

YDL229W       SSB1

YDR036C

YDR037W      KRS1

YDR042C

YDR186C

YDR188W      CCT6

YDR276C       PMP3

YDR300C       PRO1

YDR301W      CFT1

YDR393W      SHE9

YDR408C       ADE8

YDR409W      SIZ1

YDR447C       RPS17B

YDR448W      ADA2

YDR449C       UTP6

YDR450W      RPS18A

YDR470C       UGO1

YDR471W      RPL27B

YDR500C       RPL37B

YDR501W      PLM2

YEL007W

YEL009C        GCN4

YEL022W       GEA2

YEL023C

YEL054C        RPL12A

YEL056W       HAT2

YEL057C

YER033C        ZRG8

YER034W

YER056C-A    RPL34A

YER074W       RPS24A

YER101C        AST2

YER102W       RPS8B

YER116C        SLX8

YER117W       RPL23B

YER168C        CCA1

YER169W       RPH1

YFL023W       BUD27

YFL024C        EPL1

YFR017C

YFR031C-A    RPL2A

YGL030W       RPL30

YGL031C        RPL24A

YGL073W       HSF1

YGL075C        MPS2

YGL076C        RPL7A

YGL083W       SCY1

YGL084C        GUP1

YGL103W       RPL28

YGL104C        VPS73

YGL115W       SNF4

YGL123W       RPS2

YGL124C        MON1

YGL189C        RPS26A

YGR027C       RPS25A

YGR033C

YGR034W      RPL26B

YGR085C       RPL11B

YGR117C

YGR118W      RPS23A

YGR148C       RPL24B

YGR149W

YGR159C       NSR1

YGR192C       TDH3

YGR258C       RAD2

YGR260W      TNA1

YHL001W       RPL14B

YHL015W       RPS20

YHL016C        DUR3

YHL033C        RPL8A

YHR009C

YHR010W      RPL27A

YHR021C       RPS27B

YHR021W-A  ECM12

YHR033W

YHR096C       HXT5

YHR122W

YHR203C       RPS4B

YHR204W      MNL1

YIL018W        RPL2B

YIL052C         RPL34B

YIL053W        RHR2

YIL055C

YIL148W        RPL40A

YIL149C         MLP2

YJL049W

YJL089W        SIP4

YJL090C         DPB11

YJL133W        MRS3

YJL134W        LCB3

YJL136C         RPS21B

YJL177W        RPL17B

YJL178C

YJL189W        RPL39

YJL190C         RPS22A

YJL191W        RPS14B

YJL192C

YJR058C         APS2

YJR059W        PTK2

YJR094C         IME1

YJR094W-A   RPL43B

YJR123W        RPS5

YJR139C         HOM6

YKL006C-A   SFT1

YKL006W      RPL14A

YKL156W      RPS27A

YKL178C       STE3

YKL180W      RPL17A

YKR057W      RPS21A

YKR094C       RPL40B

YKR095W      MLP1

YLL039C        UBI4

YLR044C        PDC1

YLR047C

YLR048W       RPS0B

YLR061W       RPL22A

YLR074C        BUD20

YLR075W       RPL10

YLR286C        CTS1

YLR333C        RPS25B

YLR387C

YLR388W       RPS29A

YLR390W-A   CCW14

YLR437C

YLR438W       CAR2

YLR447C        VMA6

YLR448W       RPL6B

YML024W      RPS17A

YML025C

YML026C       RPS18B

YML073C       RPL6A

YMR013C       SEC59

YMR013W-A

YMR014W      BUD22

YMR015C       ERG5

YMR099C

YMR100W      MUB1

YMR116C       ASC1

YMR142C       RPL13B

YMR143W      RPS16A

YMR144W

YMR194W      RPL36A

YMR229C       RRP5

YMR230W      RPS10B

YMR231W      PEP5

YMR242C       RPL20A

YMR243C       ZRC1

YMR244W

YNL010W

YNL011C

YNL069C       RPL16B

YNL101W

YNL154C       YCK2

YNL162W      RPL42A

YNL162W-A

YNL163C       RIA1

YNL178W      RPS3

YNL180C       RHO5

YNL190W

YNL216W      RAP1

YNL253W

YNL254C

YNL302C       RPS19B

YOL039W      RPP2A

YOL040C       RPS15

YOL059W      GPD2

YOL060C       MAM3

YOL109W

YOL121C       RPS19A

YOL127W      RPL25

YOL128C       YGK3

YOL136C       PFK27

YOR043W      WHI2

YOR056C       NOB1

YOR057W      SGT1

YOR095C       RKI1

YOR096W      RPS7A

YOR100C       CRC1

YOR101W      RAS1

YOR124C       UBP2

YOR292C

YOR293W      RPS10A

YOR312C       RPL20B

YOR340C       RPA43

YOR341W      RPA190

YOR344C       TYE7

YOR365C

YOR367W      SCP1

YOR369C       RPS12

YPL081W       RPS9A

YPL082C        MOT1

YPL090C        RPS6A

YPL131W       RPL5

YPL144W

YPL145C        KES1

YPL189W       GUP2

YPL190C        NAB3

YPL198W       RPL7B

YPL199C

YPL220W       RPL1A

YPL226W       NEW1

YPL227C        ALG5

YPR080W       TEF1

YPR102C        RPL11A

YPR103W       PRE2

YPR105C        COG4

YPR106W       ISR1

YPR110C        RPC40

YPR111W       DBF20

YPR161C        SGV1

 

Genes Not Found:

 

SNR34

SNR39B

SNR47

SNR62

SNR72

SNR73

SNR74

SNR75

SNR76

SNR77

SNR78

TE%28UUC%29L

TP%28UGG%29O3

YBL071C-B

YGL188C-A

YGR027W-A

YGR027W-B

YHL015W-A

YJL133C-A

YLR264C-A

YMR230W-A

YMR242W-A

YPL189C-A

MIPS Functional Classification

Category          p-value In Category from Cluster          k          f

ribosome biogenesis      1e-14   RPL19B RPS8A RPL32 RPS11B RPS6B RPS9B RPS29B RPL31A RPL13A RPS16B RPP1B RPL41B RPL35B RPL41A RPL35A RPS17B RPS18A RPL27B RPL37B RPL12A RPL34A RPS24A RPS8B RPL23B RPL2A RPL30 RPL24A RPL7A RPL28 RPS2 RPS26A RPS25A RPL26B RPL11B RPS23A RPL24B RPL14B RPS20 RPL8A RPL27A RPS27B RPS4B RPL2B RPL34B RPL40A RPS21B RPL17B RPL39 RPS22A RPS14B RPL43B RPS5 RPL14A RPS27A RPL17A RPS21A RPL40B RPS0B RPL22A RPL10 RPS25B RPS29A RPL6B RPS17A YML025C RPS18B RPL6A ASC1 RPL13B RPS16A RPL36A RPS10B RPL20A RPL16B RPL42A RPS3 RPS19B RPP2A RPS15 RPS19A RPL25 RPS7A RPS10A RPL20B RPS12 RPS9A RPS6A RPL5 RPL7B RPL1A RPL11A          91        215

PROTEIN SYNTHESIS          1e-14   RPL19B RPS8A RPL32 RPS11B TEF2 RPS6B RPS9B RPS29B RPL31A RPL13A RPS16B RPP1B RPL41B RPL35B RPL41A RPL35A SSB1 KRS1 RPS17B RPS18A RPL27B RPL37B RPL12A RPL34A RPS24A RPS8B RPL23B RPL2A RPL30 RPL24A RPL7A RPL28 RPS2 RPS26A RPS25A RPL26B RPL11B RPS23A RPL24B RPL14B RPS20 RPL8A RPL27A RPS27B RPS4B RPL2B RPL34B RPL40A RPS21B RPL17B RPL39 RPS22A RPS14B RPL43B RPS5 RPL14A RPS27A RPL17A RPS21A RPL40B UBI4 RPS0B RPL22A RPL10 RPS25B RPS29A RPL6B RPS17A YML025C RPS18B RPL6A ASC1 RPL13B RPS16A RPL36A RPS10B RPL20A RPL16B RPL42A RIA1 RPS3 RAP1 RPS19B RPP2A RPS15 RPS19A RPL25 RPS7A RPS10A RPL20B RPS12 RPS9A RPS6A RPL5 RPL7B RPL1A NEW1 TEF1 RPL11A       99        359

cytoplasm         1.17684e-14    RPL19B RPS8A RPL32 RPS11B TKL2 TEF2 RPS6B RPS9B GPD1 RPS29B RPL31A RPL13A RPS16B RPP1B RPL41B RPL35B RPL41A RPL35A SSB1 KRS1 CCT6 PRO1 ADE8 RPS17B RPS18A RPL27B RPL37B RPL12A HAT2 RPL34A RPS24A RPS8B RPL23B CCA1 RPL30 RPL24A RPL7A RPL28 RPS2 RPS26A RPS25A RPL26B RPL11B RPS23A RPL24B TDH3 RPL14B RPS20 RPL8A RPL27A RPS27B RPS4B RPL2B RPL34B RPL40A RPS21B RPL17B RPL39 RPS22A RPS14B RPL43B RPS5 RPL14A RPS27A RPL17A RPS21A RPL40B UBI4 PDC1 RPS0B RPL10 RPS25B RPS29A CAR2 RPL6B RPS17A RPS18B RPL6A ASC1 RPL13B RPS16A RPL36A RPS10B RPL20A RPL16B RPL42A RPS3 RPS19B RPP2A RPS15 RPS19A RPL25 RKI1 RPS7A RAS1 UBP2 RPS10A RPL20B RPS12 RPS9A RPS6A RPL5 KES1 RPL7B RPL1A TEF1 RPL11A             107      554

SUBCELLULAR LOCALISATION   2.58016e-13    POP5 PIM1 RPL19B RPS8A RHK1 RPL32 ROX3 RPS11B TKL2 TEF2 FZO1 RPS6B RPS9B KCC4 AGP1 GPD1 RPS29B RPL31A RPL13A RPS16B RPP1B RPL41B RPL35B RPL41A RPL35A SSB1 KRS1 CCT6 PRO1 CFT1 ADE8 RPS17B ADA2 RPS18A RPL27B RPL37B GCN4 GEA2 RPL12A HAT2 RPL34A RPS24A RPS8B RPL23B CCA1 RPL30 RPL24A HSF1 MPS2 RPL7A RPL28 SNF4 RPS2 RPS26A RPS25A RPL26B RPL11B RPS23A RPL24B NSR1 TDH3 RAD2 RPL14B RPS20 DUR3 RPL8A RPL27A RPS27B HXT5 RPS4B RPL2B RPL34B RPL40A MLP2 SIP4 DPB11 MRS3 RPS21B RPL17B RPL39 RPS22A RPS14B APS2 IME1 RPL43B RPS5 SFT1 RPL14A RPS27A STE3 RPL17A RPS21A RPL40B MLP1 UBI4 PDC1 RPS0B RPL10 CTS1 RPS25B RPS29A CAR2 VMA6 RPL6B RPS17A YML025C RPS18B RPL6A SEC59 ERG5 ASC1 RPL13B RPS16A RPL36A RRP5 RPS10B PEP5 RPL20A ZRC1 RPL16B YCK2 RPL42A RPS3 RAP1 RPS19B RPP2A RPS15 GPD2 RPS19A RPL25 RKI1 RPS7A RAS1 UBP2 RPS10A RPL20B RPA43 RPA190 TYE7 RPS12 RPS9A MOT1 RPS6A RPL5 KES1 NAB3 RPL7B RPL1A ALG5 TEF1 RPL11A PRE2 RPC40            153      2256

 

 

 

MIPS Phenotypes

Category          p-value In Category from Cluster          k          f

 

 

 

MIPS Subcellular Localization

Category          p-value In Category from Cluster          k          f

cytoplasm         2.18714e-14    RPL19B RPS8A RPL32 RPS11B TKL2 TEF2 RPS6B RPS9B SRO9 GPD1 RPS29B RPL31A RPL13A RPS16B RPP1B RPL41B RPL35B RPL41A RPL35A SSB1 KRS1 CCT6 PRO1 ADE8 RPS17B RPS18A RPL27B RPL37B RPL12A HAT2 RPL34A RPS24A RPS8B RPL23B CCA1 RPL30 RPL24A RPL7A RPL28 RPS2 RPS26A RPS25A RPL26B RPL11B RPS23A RPL24B TDH3 RPL14B RPS20 RPL8A RPL27A RPS27B RPS4B RPL2B RPL34B RPL40A RPS21B RPL17B RPL39 RPS22A RPS14B RPL43B RPS5 RPL14A RPS27A RPL17A RPS21A RPL40B UBI4 PDC1 RPS0B RPL22A RPL10 RPS25B RPS29A CAR2 RPL6B RPS17A RPS18B RPL6A ASC1 RPL13B RPS16A RPL36A RPS10B RPL20A RPL16B RPL42A RPS3 RPS19B RPP2A RPS15 RPS19A RPL25 RKI1 RPS7A UBP2 RPS10A RPL20B RPS12 RPS9A RPS6A RPL5 KES1 RPL7B RPL1A TEF1 RPL11A             108      593

 

 

 

MIPS Protein Complexes

Category          p-value In Category from Cluster          k          f

cytoplasmic ribosomal small subunit       1e-14   RPS8A RPS11B RPS6B RPS9B RPS29B RPS16B RPS17B RPS18A RPS24A RPS8B RPS2 RPS26A RPS25A RPS23A RPS20 RPS27B RPS4B RPS21B RPS22A RPS14B RPS5 RPS27A RPS21A RPS0B RPS25B RPS29A RPS17A RPS18B ASC1 RPS16A RPS10B RPS3 RPS19B RPS15 RPS19A RPS7A RPS10A RPS12 RPS9A RPS6A     40        57

Cytoplasmic ribosomes 1e-14   RPL19B RPS8A RPL32 RPS11B RPS6B RPS9B RPS29B RPL31A RPL13A RPS16B RPP1B RPL41B RPL35B RPL41A RPL35A RPS17B RPS18A RPL27B RPL37B RPL12A RPL34A RPS24A RPS8B RPL23B RPL2A RPL30 RPL24A RPL7A RPL28 RPS2 RPS26A RPS25A RPL26B RPL11B RPS23A RPL24B RPL14B RPS20 RPL8A RPL27A RPS27B RPS4B RPL2B RPL34B RPL40A RPS21B RPL17B RPL39 RPS22A RPS14B RPL43B RPS5 RPL14A RPS27A RPL17A RPS21A RPL40B RPS0B RPL22A RPL10 RPS25B RPS29A RPL6B RPS17A RPS18B RPL6A ASC1 RPL13B RPS16A RPL36A RPS10B RPL20A RPL16B RPL42A RPS3 RPS19B RPP2A RPS15 RPS19A RPL25 RPS7A RPS10A RPL20B RPS12 RPS9A RPS6A RPL5 RPL7B RPL1A RPL11A          90        138

cytoplasmic ribosomal large subunit       1e-14   RPL19B RPL32 RPL31A RPL13A RPP1B RPL41B RPL35B RPL41A RPL35A RPL27B RPL37B RPL12A RPL34A RPL23B RPL2A RPL30 RPL24A RPL7A RPL28 RPL26B RPL11B RPL24B RPL14B RPL8A RPL27A RPL2B RPL34B RPL40A RPL17B RPL39 RPL43B RPL14A RPL17A RPL40B RPL22A RPL10 RPL6B RPL6A RPL13B RPL36A RPL20A RPL16B RPL42A RPP2A RPL25 RPL20B RPL5 RPL7B RPL1A RPL11A          50        81

Translation complexes   1e-14   RPL19B RPS8A RPL32 RPS11B TEF2 RPS6B RPS9B RPS29B RPL31A RPL13A RPS16B RPP1B RPL41B RPL35B RPL41A RPL35A RPS17B RPS18A RPL27B RPL37B RPL12A RPL34A RPS24A RPS8B RPL23B RPL2A RPL30 RPL24A RPL7A RPL28 RPS2 RPS26A RPS25A RPL26B RPL11B RPS23A RPL24B RPL14B RPS20 RPL8A RPL27A RPS27B RPS4B RPL2B RPL34B RPL40A RPS21B RPL17B RPL39 RPS22A RPS14B RPL43B RPS5 RPL14A RPS27A RPL17A RPS21A RPL40B RPS0B RPL22A RPL10 RPS25B RPS29A RPL6B RPS17A RPS18B RPL6A ASC1 RPL13B RPS16A RPL36A RPS10B RPL20A RPL16B RPL42A RPS3 RPS19B RPP2A RPS15 RPS19A RPL25 RPS7A RPS10A RPL20B RPS12 RPS9A RPS6A RPL5 RPL7B RPL1A TEF1 RPL11A            92        240

 

 

 

MIPS Protein Classes

Category          p-value In Category from Cluster          k          f

 

 

 

GO Molecular Function

Category          p-value In Category from Cluster          k          f

structural constituent of ribosome [GO:0003735]          1e-14   RPL19B RPS8A RPL32 RPS11B RPS6B RPS9B RPS29B RPL31A RPL13A RPS16B RPP1B RPL41B RPL35B RPL41A RPL35A RPS17B RPS18A RPL27B RPL37B RPL12A RPL34A RPS24A RPS8B RPL23B RPL2A RPL30 RPL24A RPL7A RPL28 RPS2 RPS26A RPS25A RPL26B RPL11B RPS23A RPL24B RPL14B RPS20 RPL8A RPL27A RPS27B RPS4B RPL2B RPL34B RPL40A RPS21B RPL17B RPL39 RPS22A RPS14B RPL43B RPS5 RPL14A RPS27A RPL17A RPS21A RPL40B RPS0B RPL22A RPL10 RPS25B RPS29A RPL6B RPS17A YML025C RPS18B RPL6A RPL13B RPS16A RPL36A RPS10B RPL20A RPL16B RPL42A RPS3 RPS19B RPP2A RPS15 RPS19A RPL25 RPS7A RPS10A RPL20B RPS12 RPS9A RPS6A RPL5 RPL7B RPL1A RPL11A          90        206

structural molecule [GO:0005198]        1e-14   RPL19B RPS8A RPL32 RPS11B RPS6B RPS9B RPS29B RPL31A RPL13A RPS16B RPP1B RPL41B RPL35B RPL41A RPL35A RPS17B RPS18A RPL27B RPL37B RPL12A RPL34A RPS24A RPS8B RPL23B RPL2A RPL30 RPL24A MPS2 RPL7A RPL28 RPS2 RPS26A RPS25A RPL26B RPL11B RPS23A RPL24B RPL14B RPS20 RPL8A RPL27A RPS27B RPS4B RPL2B RPL34B RPL40A RPS21B RPL17B RPL39 RPS22A RPS14B RPL43B RPS5 RPL14A RPS27A RPL17A RPS21A RPL40B RPS0B RPL22A RPL10 RPS25B RPS29A CCW14 RPL6B RPS17A YML025C RPS18B RPL6A RPL13B RPS16A RPL36A RPS10B RPL20A RPL16B RPL42A RPS3 RPS19B RPP2A RPS15 RPS19A RPL25 RPS7A RPS10A RPL20B RPS12 RPS9A RPS6A RPL5 RPL7B RPL1A RPL11A          92        310

 

 

 

GO Biological Process

Category          p-value In Category from Cluster          k          f

protein biosynthesis [GO:0006412]       1e-14   RPL19B RPS8A RHK1 RPL32 RPS11B TEF2 RPS6B RPS9B SRO9 RPS29B RPL31A RPL13A RPS16B RPP1B RPL41B RPL35B RPL41A PPH22 RPL35A SSB1 KRS1 RPS17B RPS18A RPL27B RPL37B RPL12A RPL34A RPS24A RPS8B RPL23B CCA1 RPL2A RPL30 RPL24A RPL7A RPL28 RPS2 RPS26A RPS25A RPL26B RPL11B RPS23A RPL24B RPL14B RPS20 RPL8A RPL27A RPS27B RPS4B RPL2B RPL34B RPL40A RPS21B RPL17B RPL39 RPS22A RPS14B RPL43B RPS5 RPL14A RPS27A RPL17A RPS21A RPL40B RPS0B RPL22A RPL10 RPS25B RPS29A RPL6B RPS17A YML025C RPS18B RPL6A SEC59 RPL13B RPS16A RPL36A RPS10B RPL20A RPL16B RPL42A RPS3 RPS19B RPP2A RPS15 RPS19A RPL25 RPS7A RPS10A RPL20B RPS12 RPS9A RPS6A RPL5 RPL7B RPL1A ALG5 TEF1 RPL11A       100      415

macromolecule biosynthesis [GO:0009059]      1.03251e-14    RPL19B SKT5 RPS8A RHK1 RPL32 RPS11B TEF2 RPS6B RPS9B SRO9 RPS29B RPL31A RPL13A RPS16B RPP1B RPL41B RPL35B RPL41A PPH22 RPL35A SSB1 KRS1 RPS17B RPS18A RPL27B RPL37B RPL12A RPL34A RPS24A RPS8B RPL23B CCA1 RPL2A RPL30 RPL24A RPL7A RPL28 RPS2 RPS26A RPS25A RPL26B RPL11B RPS23A RPL24B RPL14B RPS20 RPL8A RPL27A RPS27B RPS4B RPL2B RPL34B RPL40A RPS21B RPL17B RPL39 RPS22A RPS14B RPL43B RPS5 RPL14A RPS27A RPL17A RPS21A RPL40B RPS0B RPL22A RPL10 RPS25B RPS29A RPL6B RPS17A YML025C RPS18B RPL6A SEC59 RPL13B RPS16A RPL36A RPS10B RPL20A RPL16B RPL42A RPS3 RPS19B RPP2A RPS15 RPS19A RPL25 RPS7A RPS10A RPL20B RPS12 RPS9A RPS6A RPL5 RPL7B RPL1A ALG5 TEF1 RPL11A          101      422

protein metabolism [GO:0019538]        2.04281e-14    PIM1 RPL19B AST1 RPS8A RHK1 RPL32 RPS11B TEF2 RPS6B RPS9B KCC4 SRO9 RPS29B RPL31A RPL13A RPS16B RPP1B RPL41B RPL35B RPL41A PPH22 RPL35A SSB1 KRS1 CCT6 SIZ1 RPS17B ADA2 RPS18A RPL27B RPL37B GEA2 RPL12A RPL34A RPS24A RPS8B RPL23B CCA1 EPL1 RPL2A RPL30 RPL24A RPL7A RPL28 VPS73 RPS2 MON1 RPS26A RPS25A RPL26B RPL11B RPS23A RPL24B RPL14B RPS20 RPL8A RPL27A RPS27B RPS4B MNL1 RPL2B RPL34B RPL40A MLP2 RPS21B RPL17B RPL39 RPS22A RPS14B RPL43B RPS5 SFT1 RPL14A RPS27A RPL17A RPS21A RPL40B MLP1 UBI4 RPS0B RPL22A RPL10 RPS25B RPS29A RPL6B RPS17A YML025C RPS18B RPL6A SEC59 RPL13B RPS16A RPL36A RPS10B PEP5 RPL20A RPL16B YCK2 RPL42A RPS3 RPS19B RPP2A RPS15 RPS19A RPL25 YGK3 NOB1 RPS7A UBP2 RPS10A RPL20B RPS12 RPS9A RPS6A RPL5 RPL7B RPL1A ALG5 TEF1 RPL11A PRE2 COG4 DBF20 SGV1     124      1168

biosynthesis [GO:0009058]      4.21885e-14    RPL19B SKT5 RPS8A RHK1 RPL32 RPS11B TEF2 RPS6B RPS9B HIS4 SRO9 RPS29B RPL31A RPL13A RPS16B RPP1B RPL41B RPL35B RPL41A PPH22 RPL35A SSB1 KRS1 PRO1 ADE8 RPS17B RPS18A RPL27B RPL37B GCN4 RPL12A RPL34A RPS24A RPS8B RPL23B CCA1 RPL2A RPL30 RPL24A RPL7A RPL28 RPS2 RPS26A RPS25A RPL26B RPL11B RPS23A RPL24B TDH3 RPL14B RPS20 RPL8A RPL27A RPS27B RPS4B RPL2B RPL34B RHR2 RPL40A SIP4 LCB3 RPS21B RPL17B RPL39 RPS22A RPS14B RPL43B RPS5 RPL14A RPS27A RPL17A RPS21A RPL40B RPS0B RPL22A RPL10 RPS25B RPS29A RPL6B RPS17A YML025C RPS18B RPL6A SEC59 ERG5 RPL13B RPS16A RPL36A RPS10B RPL20A RPL16B RPL42A RPS3 RPS19B RPP2A RPS15 RPS19A RPL25 RPS7A RPS10A RPL20B RPS12 RPS9A RPS6A RPL5 KES1 RPL7B RPL1A ALG5 TEF1 RPL11A 111      731

metabolism [GO:0008152]       4.1489e-13      POP5 PIM1 RPL19B SKT5 AST1 RPS8A RHK1 RPL32 ROX3 RPS11B TKL2 TEF2 RPS6B NTC20 RPS9B KCC4 HIS4 SRO9 RPS29B RPL31A RPL13A RPS16B RPP1B RPL41B RPL35B RPL41A PPH22 RPL35A SSB1 KRS1 CCT6 PRO1 CFT1 ADE8 SIZ1 RPS17B ADA2 UTP6 RPS18A RPL27B RPL37B GCN4 GEA2 RPL12A HAT2 RPL34A RPS24A RPS8B SLX8 RPL23B CCA1 RPH1 EPL1 RPL2A RPL30 RPL24A RPL7A GUP1 RPL28 VPS73 SNF4 RPS2 MON1 RPS26A RPS25A RPL26B RPL11B RPS23A RPL24B NSR1 TDH3 RAD2 RPL14B RPS20 RPL8A RPL27A RPS27B RPS4B MNL1 RPL2B RPL34B RHR2 RPL40A MLP2 SIP4 DPB11 MRS3 LCB3 RPS21B RPL17B RPL39 RPS22A RPS14B RPL43B RPS5 HOM6 SFT1 RPL14A RPS27A RPL17A RPS21A RPL40B MLP1 UBI4 PDC1 RPS0B RPL22A RPL10 RPS25B RPS29A CAR2 RPL6B RPS17A YML025C RPS18B RPL6A SEC59 ERG5 RPL13B RPS16A RPL36A RRP5 RPS10B PEP5 RPL20A ZRC1 RPL16B YCK2 RPL42A RPS3 RAP1 RPS19B RPP2A RPS15 GPD2 RPS19A RPL25 YGK3 PFK27 NOB1 RKI1 RPS7A CRC1 UBP2 RPS10A RPL20B RPA43 RPA190 TYE7 RPS12 RPS9A MOT1 RPS6A RPL5 KES1 NAB3 RPL7B RPL1A ALG5 TEF1 RPL11A PRE2 COG4 RPC40 DBF20 SGV1       166            2693

cell growth and/or maintenance [GO:0008151] 4.0955e-11      POP5 PIM1 RPL19B SKT5 AST1 KTI11 RPS8A RHK1 RPL32 ROX3 RPS11B TKL2 TEF2 FZO1 RPS6B NTC20 RPS9B KCC4 AGP1 HIS4 SRO9 GPD1 TSR1 RPS29B RPL31A RPL13A RPS16B RPP1B RPL41B RPL35B RPL41A PPH22 RPL35A SSB1 YDR036C KRS1 CCT6 PMP3 PRO1 CFT1 SHE9 ADE8 SIZ1 RPS17B ADA2 UTP6 RPS18A UGO1 RPL27B RPL37B GCN4 GEA2 RPL12A HAT2 RPL34A RPS24A RPS8B SLX8 RPL23B CCA1 RPH1 BUD27 EPL1 RPL2A RPL30 RPL24A HSF1 MPS2 RPL7A GUP1 RPL28 VPS73 SNF4 RPS2 MON1 RPS26A RPS25A RPL26B RPL11B RPS23A RPL24B NSR1 TDH3 RAD2 TNA1 RPL14B RPS20 DUR3 RPL8A RPL27A RPS27B ECM12 HXT5 RPS4B MNL1 RPL2B RPL34B RHR2 RPL40A MLP2 SIP4 DPB11 MRS3 LCB3 RPS21B RPL17B RPL39 RPS22A RPS14B APS2 PTK2 IME1 RPL43B RPS5 HOM6 SFT1 RPL14A RPS27A STE3 RPL17A RPS21A RPL40B MLP1 UBI4 PDC1 RPS0B RPL22A BUD20 RPL10 CTS1 RPS25B RPS29A CCW14 CAR2 VMA6 RPL6B RPS17A YML025C RPS18B RPL6A SEC59 BUD22 ERG5 MUB1 RPL13B RPS16A RPL36A RRP5 RPS10B PEP5 RPL20A ZRC1 RPL16B YCK2 RPL42A RIA1 RPS3 RAP1 RPS19B RPP2A RPS15 GPD2 MAM3 RPS19A RPL25 YGK3 PFK27 WHI2 NOB1 SGT1 RKI1 RPS7A CRC1 RAS1 UBP2 RPS10A RPL20B RPA43 RPA190 TYE7 RPS12 RPS9A MOT1 RPS6A RPL5 KES1 NAB3 RPL7B RPL1A ALG5 TEF1 RPL11A PRE2 COG4 RPC40 DBF20 SGV1       197            3657

ribosomal subunit assembly [GO:0042257]       2.8611e-10      RPS11B RPS17B RPL12A RPL11B NSR1 RPS14B RPS0B RPL10 RPL6B RPS17A YML025C RPL6A RPL25 RPL5 RPL11A 15        48

ribosome assembly [GO:0042255]       5.47591e-10    RPS11B RPS17B RPL12A RPL11B NSR1 RPS14B RPS0B RPL10 RPL6B RPS17A YML025C RPL6A RPL25 RPL5 RPL11A 15        50

regulation of translational fidelity [GO:0006450]            2.06693e-06    RPS11B RPS9B RPS2 RPS23A RPS9A         5            7

ribosome biogenesis and assembly [GO:0042254]        2.58566e-06    POP5 RPS11B TSR1 RPS17B UTP6 RPL12A RPL30 RPL11B NSR1 RPS14B RPS0B RPL10 RPL6B RPS17A YML025C RPL6A RRP5 RIA1 RPL25 RPL5 RPL11A          21        165

ribosomal small subunit assembly and maintenance [GO:0000028]         5.64354e-06    RPS11B RPS17B NSR1 RPS14B RPS0B RPS17A          6          13

ribosomal large subunit assembly and maintenance [GO:0000027]         7.16595e-06    RPL12A RPL11B RPL10 RPL6B YML025C RPL6A RPL25 RPL5 RPL11A     9          35

 

 

 

GO Cellular Component

Category          p-value In Category from Cluster          k          f

cytosolic small ribosomal subunit (sensu Eukarya) [GO:0005843]          1e-14   RPS8A RPS11B RPS6B RPS9B RPS29B RPS16B RPS17B RPS18A RPS24A RPS8B RPS2 RPS26A RPS25A RPS23A RPS20 RPS27B RPS4B RPS21B RPS22A RPS14B RPS5 RPS27A RPS21A RPS0B RPS25B RPS29A RPS17A RPS18B RPS16A RPS10B RPS3 RPS19B RPS15 RPS19A RPS7A RPS10A RPS12 RPS9A RPS6A   39        61

eukaryotic 48S initiation complex [GO:0016283]          1e-14   RPS8A RPS11B RPS6B RPS9B RPS29B RPS16B RPS17B RPS18A RPS24A RPS8B RPS2 RPS26A RPS25A RPS23A RPS20 RPS27B RPS4B RPS21B RPS22A RPS14B RPS5 RPS27A RPS21A RPS0B RPS25B RPS29A RPS17A RPS18B RPS16A RPS10B RPS3 RPS19B RPS15 RPS19A RPS7A RPS10A RPS12 RPS9A RPS6A     39        61

cytosolic large ribosomal subunit (sensu Eukarya) [GO:0005842]          1e-14   RPL19B RPL32 RPL31A RPL13A RPP1B RPL41B RPL35B RPL41A RPL35A RPL27B RPL37B RPL12A RPL34A RPL23B RPL2A RPL30 RPL24A RPL7A RPL28 RPL26B RPL11B RPL24B RPL14B RPL8A RPL27A RPL2B RPL34B RPL40A RPL17B RPL39 RPL43B RPL14A RPL17A RPL40B RPL22A RPL10 RPL6B RPL6A RPL13B RPL36A RPL20A RPL16B RPL42A RPP2A RPL25 RPL20B RPL5 RPL7B RPL1A RPL11A        50        83

cytosolic ribosome (sensu Eukarya) [GO:0005830]       1e-14   RPL19B RPS8A RPL32 RPS11B RPS6B RPS9B RPS29B RPL31A RPL13A RPS16B RPP1B RPL41B RPL35B RPL41A RPL35A RPS17B RPS18A RPL27B RPL37B RPL12A RPL34A RPS24A RPS8B RPL23B RPL2A RPL30 RPL24A RPL7A RPL28 RPS2 RPS26A RPS25A RPL26B RPL11B RPS23A RPL24B RPL14B RPS20 RPL8A RPL27A RPS27B RPS4B RPL2B RPL34B RPL40A RPS21B RPL17B RPL39 RPS22A RPS14B RPL43B RPS5 RPL14A RPS27A RPL17A RPS21A RPL40B RPS0B RPL22A RPL10 RPS25B RPS29A RPL6B RPS17A RPS18B RPL6A RPL13B RPS16A RPL36A RPS10B RPL20A RPL16B RPL42A RPS3 RPS19B RPP2A RPS15 RPS19A RPL25 RPS7A RPS10A RPL20B RPS12 RPS9A RPS6A RPL5 RPL7B RPL1A RPL11A           89        151

eukaryotic 43S pre-initiation complex [GO:0016282]    1e-14   RPS8A RPS11B RPS6B RPS9B RPS29B RPS16B RPS17B RPS18A RPS24A RPS8B RPS2 RPS26A RPS25A RPS23A RPS20 RPS27B RPS4B RPS21B RPS22A RPS14B RPS5 RPS27A RPS21A RPS0B RPS25B RPS29A RPS17A RPS18B RPS16A RPS10B RPS3 RPS19B RPS15 RPS19A RPS7A RPS10A RPS12 RPS9A RPS6A     39        67

small ribosomal subunit [GO:0015935] 1e-14   RPS8A RPS11B RPS6B RPS9B RPS29B RPS16B RPS17B RPS18A RPS24A RPS8B RPS2 RPS26A RPS25A RPS23A RPS20 RPS27B RPS4B RPS21B RPS22A RPS14B RPS5 RPS27A RPS21A RPS0B RPS25B RPS29A RPS17A RPS18B RPS16A RPS10B RPS3 RPS19B RPS15 RPS19A RPS7A RPS10A RPS12 RPS9A RPS6A        39        88

large ribosomal subunit [GO:0015934]  1e-14   RPL19B RPL32 RPL31A RPL13A RPP1B RPL41B RPL35B RPL41A RPL35A RPL27B RPL37B RPL12A RPL34A RPL23B RPL2A RPL30 RPL24A RPL7A RPL28 RPL26B RPL11B RPL24B RPL14B RPL8A RPL27A RPL2B RPL34B RPL40A RPL17B RPL39 RPL43B RPL14A RPL17A RPL40B RPL22A RPL10 RPL6B YML025C RPL6A RPL13B RPL36A RPL20A RPL16B RPL42A RPP2A RPL25 RPL20B RPL5 RPL7B RPL1A RPL11A           51        122

ribosome [GO:0005840]          1e-14   RPL19B RPS8A RPL32 RPS11B TEF2 RPS6B RPS9B SRO9 RPS29B RPL31A RPL13A RPS16B RPP1B RPL41B RPL35B RPL41A RPL35A SSB1 RPS17B RPS18A RPL27B RPL37B RPL12A RPL34A RPS24A RPS8B RPL23B RPL2A RPL30 RPL24A RPL7A RPL28 RPS2 RPS26A RPS25A RPL26B RPL11B RPS23A RPL24B RPL14B RPS20 RPL8A RPL27A RPS27B RPS4B RPL2B RPL34B RPL40A RPS21B RPL17B RPL39 RPS22A RPS14B RPL43B RPS5 RPL14A RPS27A RPL17A RPS21A RPL40B RPS0B RPL22A RPL10 RPS25B RPS29A RPL6B RPS17A YML025C RPS18B RPL6A RPL13B RPS16A RPL36A RPS10B RPL20A RPL16B RPL42A RPS3 RPS19B RPP2A RPS15 RPS19A RPL25 RPS7A RPS10A RPL20B RPS12 RPS9A RPS6A RPL5 RPL7B RPL1A TEF1 RPL11A             94        258

cytosol [GO:0005829] 1e-14   RPL19B RPS8A RPL32 RPS11B RPS6B RPS9B RPS29B RPL31A RPL13A RPS16B RPP1B RPL41B RPL35B RPL41A RPL35A RPS17B RPS18A RPL27B RPL37B RPL12A RPL34A RPS24A RPS8B RPL23B RPL2A RPL30 RPL24A RPL7A RPL28 RPS2 RPS26A RPS25A RPL26B RPL11B RPS23A RPL24B TDH3 RPL14B RPS20 RPL8A RPL27A RPS27B RPS4B RPL2B RPL34B RPL40A RPS21B RPL17B RPL39 RPS22A RPS14B RPL43B RPS5 RPL14A RPS27A RPL17A RPS21A RPL40B RPS0B RPL22A RPL10 RPS25B RPS29A RPL6B RPS17A RPS18B RPL6A RPL13B RPS16A RPL36A RPS10B RPL20A RPL16B RPL42A RPS3 RPS19B RPP2A RPS15 GPD2 RPS19A RPL25 NOB1 RPS7A RPS10A RPL20B RPS12 RPS9A RPS6A RPL5 RPL7B RPL1A RPL11A PRE2            93        310

ribonucleoprotein complex [GO:0030529]        1e-14   POP5 RPL19B RPS8A RPL32 RPS11B TEF2 RPS6B NTC20 RPS9B SRO9 RPS29B RPL31A RPL13A RPS16B RPP1B RPL41B RPL35B RPL41A RPL35A SSB1 RPS17B UTP6 RPS18A RPL27B RPL37B RPL12A RPL34A RPS24A RPS8B RPL23B RPL2A RPL30 RPL24A RPL7A RPL28 RPS2 RPS26A RPS25A RPL26B RPL11B RPS23A RPL24B RPL14B RPS20 RPL8A RPL27A RPS27B RPS4B RPL2B RPL34B RPL40A RPS21B RPL17B RPL39 RPS22A RPS14B RPL43B RPS5 RPL14A RPS27A RPL17A RPS21A RPL40B RPS0B RPL22A RPL10 RPS25B RPS29A RPL6B RPS17A YML025C RPS18B RPL6A RPL13B RPS16A RPL36A RRP5 RPS10B RPL20A RPL16B RPL42A RPS3 RPS19B RPP2A RPS15 RPS19A RPL25 RPS7A RPS10A RPL20B RPS12 RPS9A RPS6A RPL5 RPL7B RPL1A TEF1 RPL11A       98        380

cytoplasm [GO:0005737]         1.97065e-13    PIM1 RPL19B SKT5 RPS8A RHK1 RPL32 RPS11B TEF2 FZO1 RPS6B RPS9B SRO9 GPD1 RPS29B RPL31A RPL13A RPS16B RPP1B RPL41B RPL35B RPL41A RPL35A SSB1 KRS1 CCT6 SHE9 RPS17B RPS18A UGO1 RPL27B RPL37B GEA2 RPL12A HAT2 RPL34A RPS24A AST2 RPS8B RPL23B CCA1 RPL2A RPL30 RPL24A MPS2 RPL7A RPL28 SNF4 RPS2 RPS26A RPS25A RPL26B RPL11B RPS23A RPL24B TDH3 RPL14B RPS20 RPL8A YHR009C RPL27A RPS27B YHR033W RPS4B MNL1 RPL2B RPL34B RPL40A MRS3 LCB3 RPS21B RPL17B RPL39 RPS22A RPS14B APS2 RPL43B RPS5 SFT1 RPL14A RPS27A RPL17A RPS21A RPL40B UBI4 RPS0B RPL22A RPL10 CTS1 RPS25B RPS29A YLR437C CAR2 VMA6 RPL6B RPS17A YML025C RPS18B RPL6A ERG5 ASC1 RPL13B RPS16A RPL36A RPS10B PEP5 RPL20A ZRC1 RPL16B RPL42A RIA1 RPS3 RPS19B RPP2A RPS15 GPD2 RPS19A RPL25 PFK27 NOB1 RPS7A CRC1 UBP2 RPS10A RPL20B RPS12 RPS9A RPS6A RPL5 RPL7B RPL1A ALG5 TEF1 RPL11A PRE2 COG4             135      1810

intracellular [GO:0005622]       3.43503e-13    POP5 PIM1 RPL19B SKT5 RPS8A RHK1 RPL32 ROX3 RPS11B TEF2 FZO1 RPS6B NTC20 RPS9B AGP1 SRO9 GPD1 TSR1 RPS29B RPL31A RPL13A RPS16B RPP1B RPL41B RPL35B RPL41A RPL35A SSB1 KRS1 CCT6 PMP3 CFT1 SHE9 SIZ1 RPS17B ADA2 UTP6 RPS18A UGO1 RPL27B RPL37B GCN4 GEA2 RPL12A HAT2 RPL34A RPS24A AST2 RPS8B SLX8 RPL23B CCA1 RPH1 EPL1 RPL2A RPL30 RPL24A HSF1 MPS2 RPL7A RPL28 SNF4 RPS2 RPS26A RPS25A RPL26B RPL11B RPS23A RPL24B NSR1 TDH3 RAD2 TNA1 RPL14B RPS20 DUR3 RPL8A YHR009C RPL27A RPS27B YHR033W HXT5 RPS4B MNL1 RPL2B RPL34B RPL40A MLP2 SIP4 DPB11 MRS3 LCB3 RPS21B RPL17B RPL39 RPS22A RPS14B APS2 IME1 RPL43B RPS5 SFT1 RPL14A RPS27A STE3 RPL17A RPS21A RPL40B MLP1 UBI4 RPS0B RPL22A BUD20 RPL10 CTS1 RPS25B RPS29A YLR437C CAR2 VMA6 RPL6B RPS17A YML025C RPS18B RPL6A BUD22 ERG5 ASC1 RPL13B RPS16A YMR144W RPL36A RRP5 RPS10B PEP5 RPL20A ZRC1 RPL16B YCK2 RPL42A RIA1 RPS3 RAP1 RPS19B RPP2A RPS15 GPD2 RPS19A RPL25 PFK27 NOB1 SGT1 RPS7A CRC1 RAS1 UBP2 RPS10A RPL20B RPA43 RPA190 TYE7 RPS12 RPS9A MOT1 RPS6A RPL5 NAB3 RPL7B RPL1A ALG5 TEF1 RPL11A PRE2 COG4 RPC40 SGV1    176      2921

cell [GO:0005623]       5.79647e-13    POP5 PIM1 RPL19B SKT5 AST1 RPS8A RHK1 RPL32 ROX3 RPS11B TEF2 FZO1 RPS6B NTC20 RPS9B KCC4 AGP1 HIS4 SRO9 GPD1 TSR1 RPS29B RPL31A RPL13A RPS16B RPP1B RPL41B RPL35B RPL41A RPL35A SSB1 KRS1 CCT6 PMP3 CFT1 SHE9 SIZ1 RPS17B ADA2 UTP6 RPS18A UGO1 RPL27B RPL37B GCN4 GEA2 RPL12A HAT2 RPL34A RPS24A AST2 RPS8B SLX8 RPL23B CCA1 RPH1 EPL1 RPL2A RPL30 RPL24A HSF1 MPS2 RPL7A GUP1 RPL28 SNF4 RPS2 RPS26A RPS25A RPL26B RPL11B RPS23A RPL24B NSR1 TDH3 RAD2 TNA1 RPL14B RPS20 DUR3 RPL8A YHR009C RPL27A RPS27B YHR033W HXT5 RPS4B MNL1 RPL2B RPL34B RPL40A MLP2 SIP4 DPB11 MRS3 LCB3 RPS21B RPL17B RPL39 RPS22A RPS14B APS2 IME1 RPL43B RPS5 SFT1 RPL14A RPS27A STE3 RPL17A RPS21A RPL40B MLP1 UBI4 RPS0B RPL22A BUD20 RPL10 CTS1 RPS25B RPS29A YLR437C CAR2 VMA6 RPL6B RPS17A YML025C RPS18B RPL6A SEC59 BUD22 ERG5 ASC1 RPL13B RPS16A YMR144W RPL36A RRP5 RPS10B PEP5 RPL20A ZRC1 RPL16B YCK2 RPL42A RIA1 RPS3 RAP1 RPS19B RPP2A RPS15 GPD2 RPS19A RPL25 PFK27 NOB1 SGT1 RPS7A CRC1 RAS1 UBP2 RPS10A RPL20B RPA43 RPA190 TYE7 RPS12 RPS9A MOT1 RPS6A RPL5 GUP2 NAB3 RPL7B RPL1A ALG5 TEF1 RPL11A PRE2 COG4 RPC40 SGV1       182      3106

 

 

 

SMART Domains

Category          p-value In Category from Cluster          k          f

 

 

 

PFam-A Domains

Category          p-value In Category from Cluster          k          f

PF00467 (KOW)        3.14523e-06    RPL27B RPL26B RPL14B RPL27A RPS4B RPL14A            6          12

 

 

 

Yeast Two Hybrid - Uetz

Category          p-value In Category from Cluster          k          f

 

 

 

Yeast Two Hybrid - Ito (core)

Category          p-value In Category from Cluster          k          f

 

 

 

Yeast Two Hybrid - Ito (full)

Category          p-value In Category from Cluster          k          f

 

 

 

Synthetic Genetic Array Analysis

Category          p-value In Category from Cluster          k          f

 

 

 

MDS Proteomics Complexes

Category          p-value In Category from Cluster          k          f

 

 

 

Cellzome Complexes

Category          p-value In Category from Cluster          k          f

YBR031W (RPL4A)   1e-14   RPL13A RPL27B RPL7A RPL28 RPL11B RPL27A RPL2B RPS14B RPL17A RPL10 RPL6A RPL13B RPL20A RPL16B RPS3 RPL25 RPL20B RPL7B    18        39

 

 

 

Proteome Localization--Observed

Category          p-value In Category from Cluster          k          f

cyto      5.18271e-05    FUN19 RPL19B YBL029C-A RPS8A TEF2 RPS6B AGP1 HIS4 GPD1 RPL31A RPL13A RPL41A PPH22 SSB1 KRS1 YDR186C PRO1 RPS17B RPS18A YEL007W GEA2 HAT2 ZRG8 YER034W AST2 RPL23B BUD27 YFR017C RPL24A SNF4 RPS2 RPS26A RPL26B RPL11B YGR117C RPS23A RPL24B TDH3 RPS20 RPL8A YHR009C YHR033W RPL34B RHR2 YJL049W MRS3 RPS22A RPS5 HOM6 SFT1 RPL14A RPS27A RPL17A UBI4 PDC1 RPL22A RPL10 YLR437C CAR2 YMR099C ASC1 RPS16A YNL010W YNL011C RPL16B RIA1 RPS3 RPS15 MAM3 YOL109W RPL25 YGK3 PFK27 WHI2 RPS9A RPL5 RPL7B YPL199C TEF1 RPL11A          80        1324

 

 

 

Proteome Localization--Predicted+Observed

Category          p-value In Category from Cluster          k          f

cyt        4.14196e-09    FUN19 RPL19B YBL029W YBL060W SKT5 AST1 RPS8A RPL32 RPS11B TKL2 TEF2 FZO1 DTR1 RPS6B RPS9B AGP1 HIS4 SRO9 GPD1 TSR1 RPS29B RPL31A RXT3 RPL13A RPS16B RPP1B YDL133W RPL35B RPL41A YDL186W PPH22 RPL35A SSB1 KRS1 YDR042C YDR186C CCT6 PMP3 PRO1 ADE8 RPS17B UTP6 RPS18A UGO1 RPL27B RPL37B YEL007W GEA2 YEL023C RPL12A HAT2 YEL057C ZRG8 YER034W RPS24A AST2 RPS8B SLX8 RPL23B BUD27 YFR017C RPL30 RPL24A RPL7A RPL28 RPS2 MON1 RPS26A RPS25A YGR033C RPL26B RPL11B YGR117C RPS23A RPL24B TDH3 TNA1 RPL14B RPS20 DUR3 RPL8A YHR009C RPL27A RPS27B YHR033W HXT5 YHR122W RPS4B MNL1 RPL2B RPL34B RHR2 YIL055C RPL40A YJL049W SIP4 MRS3 RPS21B RPL17B YJL178C RPL39 RPS22A RPS14B RPS5 HOM6 RPL14A RPS27A RPL17A RPS21A RPL40B UBI4 PDC1 RPS0B RPL22A RPL10 RPS25B YLR387C RPS29A YLR437C CAR2 VMA6 RPL6B RPS17A RPS18B RPL6A YMR099C MUB1 ASC1 RPL13B RPS16A RPL36A RPS10B PEP5 RPL20A YNL010W YNL011C RPL16B YNL101W YCK2 RPL42A RIA1 RPS3 RPS19B RPP2A RPS15 YOL109W RPS19A RPL25 YGK3 PFK27 WHI2 SGT1 RKI1 RPS7A CRC1 UBP2 YOR292C RPS10A RPL20B TYE7 SCP1 RPS12 RPS9A RPS6A RPL5 KES1 RPL7B YPL199C RPL1A NEW1 TEF1 RPL11A PRE2 COG4 DBF20             175      3210

 

 

 

Deletions Consortium (Essentiality, Morphology)

Category          p-value In Category from Cluster          k          f

 

 

 

Yeast Fitness Data

Category          p-value In Category from Cluster          k          f

Slow Growers  2.62838e-05    RPL19B ROX3 RPS11B FZO1 RPS6B RPS9B RPS29B RPL31A RPL35A PMP3 PRO1 RPS18A RPL34A RPS24A SLX8 RPL23B BUD27 RPL7A GUP1 SNF4 RPS23A NSR1 RPL27A RPS27B RPS4B RPS21B RPL39 RPL14A PDC1 YLR047C RPL22A BUD20 VMA6 RPL6B RPS17A RPL6A BUD22 ASC1 RPL13B RPS16A RPL16B RPS19B RPS19A RPS7A RPS10A RPS6A        46        617

 

 

 

Published Complexes

Category          p-value In Category from Cluster          k          f

Andersen et al. (2002) - Curr Bio 12:1-            7.97305e-09    RPS6B RPS9B RPL31A RPL27B RPS8B RPL7A RPL28 RPL26B RPL11B RPL14B RPL2B RPS5 RPL17A UBI4 RPL22A RPL6B RPS18B RPL13B RPS16A RRP5 RPL25 RPA190 RPS12 RPL5 RPC40            25        165

Harnicharnpai et al. (2001) - Mol Cell 8:505-   4.73113e-05    SSB1 RPS2 TDH3 RPS22A RPL10 RPS3 RPS15 RPL5             8          34

 

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Rap1-LiebChIP-exact.FunSpec.txt

 Input Cluster (n=23)

YBR188C        NTC20

YBR189W       RPS9B

YCL030C        HIS4

YDL136W       RPL35B

YDR186C

YDR188W      CCT6

YDR500C       RPL37B

YDR501W      PLM2

YGL030W       RPL30

YGL031C        RPL24A

YGR258C       RAD2

YGR260W      TNA1

YKR057W      RPS21A

YMR013W-A

YMR014W      BUD22

YMR116C       ASC1

YNL216W      RAP1

YOL059W      GPD2

YOL060C       MAM3

YOR124C       UBP2

YPL144W

YPL145C        KES1

YPR080W       TEF1

 

Genes Not Found:

 

SNR72

SNR73

SNR74

SNR75

MIPS Functional Classification

Category          p-value In Category from Cluster          k          f

cytoplasm         1.17895e-06    RPS9B RPL35B CCT6 RPL37B RPL30 RPL24A RPS21A ASC1 UBP2 KES1 TEF1             11        554

PROTEIN SYNTHESIS          2.39924e-06    RPS9B RPL35B RPL37B RPL30 RPL24A RPS21A ASC1 RAP1 TEF1             9          359

ribosome biogenesis      7.78433e-06    RPS9B RPL35B RPL37B RPL30 RPL24A RPS21A ASC1   7          215

 

 

 

MIPS Phenotypes

Category          p-value In Category from Cluster          k          f

 

 

 

MIPS Subcellular Localization

Category          p-value In Category from Cluster          k          f

cytoplasm         2.32882e-06    RPS9B RPL35B CCT6 RPL37B RPL30 RPL24A RPS21A ASC1 UBP2 KES1 TEF1             11        593

 

 

 

MIPS Protein Complexes

Category          p-value In Category from Cluster          k          f

Cytoplasmic ribosomes 3.93754e-07    RPS9B RPL35B RPL37B RPL30 RPL24A RPS21A ASC1   7          138

Translation complexes   1.22639e-06    RPS9B RPL35B RPL37B RPL30 RPL24A RPS21A ASC1 TEF1      8          240

 

 

 

MIPS Protein Classes

Category          p-value In Category from Cluster          k          f

 

 

 

GO Molecular Function

Category          p-value In Category from Cluster          k          f

 

 

 

GO Biological Process

Category          p-value In Category from Cluster          k          f

 

 

 

GO Cellular Component

Category          p-value In Category from Cluster          k          f

cytosolic ribosome (sensu Eukarya) [GO:0005830]       1.27432e-05    RPS9B RPL35B RPL37B RPL30 RPL24A RPS21A          6          151

ribosome [GO:0005840]          2.5696e-05      RPS9B RPL35B RPL37B RPL30 RPL24A RPS21A TEF1    7          258

ribonucleoprotein complex [GO:0030529]        3.71444e-05    NTC20 RPS9B RPL35B RPL37B RPL30 RPL24A RPS21A TEF1             8          380

cytosol [GO:0005829] 8.35672e-05    RPS9B RPL35B RPL37B RPL30 RPL24A RPS21A GPD2   7          310

 

 

 

SMART Domains

Category          p-value In Category from Cluster          k          f

 

 

 

PFam-A Domains

Category          p-value In Category from Cluster          k          f

 

 

 

Yeast Two Hybrid - Uetz

Category          p-value In Category from Cluster          k          f

 

 

 

Yeast Two Hybrid - Ito (core)

Category          p-value In Category from Cluster          k          f

 

 

 

Yeast Two Hybrid - Ito (full)

Category          p-value In Category from Cluster          k          f

 

 

 

Synthetic Genetic Array Analysis

Category          p-value In Category from Cluster          k          f

 

 

 

MDS Proteomics Complexes

Category          p-value In Category from Cluster          k          f

 

 

 

Cellzome Complexes

Category          p-value In Category from Cluster          k          f

 

 

 

Proteome Localization--Observed

Category          p-value In Category from Cluster          k          f

 

 

 

Proteome Localization--Predicted+Observed

Category          p-value In Category from Cluster          k          f

 

 

 

Deletions Consortium (Essentiality, Morphology)

Category          p-value In Category from Cluster          k          f

 

 

 

Yeast Fitness Data

Category          p-value In Category from Cluster          k          f

 

 

 

Published Complexes

Category          p-value In Category from Cluster          k          f

 

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Rap1-PBMandLiebChIP-alldata.FunSpec.txt

Input Cluster (n=283)

YAL033W       POP5

YAL034C        FUN19

YAL051W       OAF1

YBL022C        PIM1

YBL027W       RPL19B

YBL028C

YBL029C-A

YBL029W

YBL060W

YBL061C        SKT5

YBL069W       AST1

YBL071W-A   KTI11

YBL072C        RPS8A

YBL087C        RPL23A

YBR048W       RPS11B

YBR084C-A   RPL19A

YBR085W       AAC3

YBR117C        TKL2

YBR118W       TEF2

YBR179C        FZO1

YBR180W       DTR1

YBR181C        RPS6B

YBR188C        NTC20

YBR189W       RPS9B

YBR191W       RPL21A

YCL024W       KCC4

YCL025C        AGP1

YCL030C        HIS4

YCL036W       GFD2

YCL037C        SRO9

YDL022W       GPD1

YDL055C        PSA1

YDL060W       TSR1

YDL061C        RPS29B

YDL075W       RPL31A

YDL076C        RXT3

YDL082W       RPL13A

YDL083C        RPS16B

YDL130W       RPP1B

YDL133C-A   RPL41B

YDL133W

YDL136W       RPL35B

YDL168W       SFA1

YDL169C        UGX2

YDL184C        RPL41A

YDL186W

YDL188C        PPH22

YDL191W       RPL35A

YDL229W       SSB1

YDR036C

YDR037W      KRS1

YDR064W      RPS13

YDR276C       PMP3

YDR300C       PRO1

YDR301W      CFT1

YDR324C       UTP4

YDR325W      YCG1

YDR393W      SHE9

YDR408C       ADE8

YDR409W      SIZ1

YDR447C       RPS17B

YDR448W      ADA2

YDR449C       UTP6

YDR450W      RPS18A

YDR470C       UGO1

YDR471W      RPL27B

YDR500C       RPL37B

YDR501W      PLM2

YEL007W

YEL009C        GCN4

YEL022W       GEA2

YEL023C

YEL054C        RPL12A

YER031C        YPT31

YER032W       FIR1

YER033C        ZRG8

YER034W

YER045C        ACA1

YER046W       SPO73

YER056C-A    RPL34A

YER074W       RPS24A

YER101C        AST2

YER102W       RPS8B

YER116C        SLX8

YER117W       RPL23B

YER130C

YER131W       RPS26B

YER168C        CCA1

YER169W       RPH1

YFL021W       GAT1

YFL022C        FRS2

YFL023W       BUD27

YFL024C        EPL1

YFL034C-A    RPL22B

YFL034W

YFL051C

YFR031C-A    RPL2A

YGL030W       RPL30

YGL031C        RPL24A

YGL071W       RCS1

YGL073W       HSF1

YGL075C        MPS2

YGL083W       SCY1

YGL084C        GUP1

YGL103W       RPL28

YGL104C        VPS73

YGL115W       SNF4

YGL123W       RPS2

YGL124C        MON1

YGL135W       RPL1B

YGL136C        MRM2

YGL189C        RPS26A

YGL258W       VEL1

YGR027C       RPS25A

YGR033C

YGR034W      RPL26B

YGR085C       RPL11B

YGR117C

YGR118W      RPS23A

YGR180C       RNR4

YGR192C       TDH3

YGR213C       RTA1

YGR214W      RPS0A

YHL001W       RPL14B

YHL033C        RPL8A

YHR021C       RPS27B

YHR021W-A  ECM12

YHR033W

YHR096C       HXT5

YHR122W

YHR203C       RPS4B

YHR204W      MNL1

YIL018W        RPL2B

YIL053W        RHR2

YIL055C

YIL133C         RPL16A

YIL148W        RPL40A

YIL149C         MLP2

YJL049W

YJL089W        SIP4

YJL090C         DPB11

YJL134W        LCB3

YJL136C         RPS21B

YJL189W        RPL39

YJL190C         RPS22A

YJL191W        RPS14B

YJL192C

YJR058C         APS2

YJR059W        PTK2

YJR123W        RPS5

YJR134C         SGM1

YJR139C         HOM6

YJR145C         RPS4A

YJR147W        HMS2

YKL006C-A   SFT1

YKL006W      RPL14A

YKL156W      RPS27A

YKL175W      ZRT3

YKL176C       LST4

YKL178C       STE3

YKL180W      RPL17A

YKR057W      RPS21A

YKR092C       SRP40

YKR093W      PTR2

YKR094C       RPL40B

YKR095W      MLP1

YKR102W      FLO10

YLL039C        UBI4

YLR044C        PDC1

YLR047C

YLR048W       RPS0B

YLR061W       RPL22A

YLR074C        BUD20

YLR075W       RPL10

YLR103C        CDC45

YLR104W

YLR166C        SEC10

YLR167W       RPS31

YLR254C

YLR256W       HAP1

YLR286C        CTS1

YLR287C-A    RPS30A

YLR333C        RPS25B

YLR344W       RPL26A

YLR387C

YLR388W       RPS29A

YLR390W-A   CCW14

YLR437C

YLR438W       CAR2

YLR441C        RPS1A

YLR447C        VMA6

YLR448W       RPL6B

YML024W      RPS17A

YML025C

YML026C       RPS18B

YML063W      RPS1B

YML064C       TEM1

YML073C       RPL6A

YMR013C       SEC59

YMR013W-A

YMR014W      BUD22

YMR015C       ERG5

YMR116C       ASC1

YMR142C       RPL13B

YMR143W      RPS16A

YMR144W

YMR194W      RPL36A

YMR229C       RRP5

YMR230W      RPS10B

YMR231W      PEP5

YMR242C       RPL20A

YMR243C       ZRC1

YMR244W

YMR265C

YMR266W      RSN1

YNL010W

YNL011C

YNL067W      RPL9B

YNL068C       FKH2

YNL069C       RPL16B

YNL096C       RPS7B

YNL101W

YNL154C       YCK2

YNL216W      RAP1

YNL253W

YNL254C

YNL288W      CAF40

YNL302C       RPS19B

YOL039W      RPP2A

YOL040C       RPS15

YOL059W      GPD2

YOL060C       MAM3

YOL082W      CVT19

YOL109W

YOL121C       RPS19A

YOL127W      RPL25

YOL128C       YGK3

YOL136C       PFK27

YOR043W      WHI2

YOR056C       NOB1

YOR057W      SGT1

YOR095C       RKI1

YOR096W      RPS7A

YOR124C       UBP2

YOR161C

YOR179C

YOR234C       RPL33B

YOR292C

YOR293W      RPS10A

YOR302W

YOR303W      CPA1

YOR312C       RPL20B

YOR340C       RPA43

YOR341W      RPA190

YOR354C       MSC6

YOR355W      GDS1

YOR359W      VTS1

YOR365C

YOR367W      SCP1

YOR369C       RPS12

YPL016W       SWI1

YPL017C

YPL081W       RPS9A

YPL082C        MOT1

YPL090C        RPS6A

YPL131W       RPL5

YPL162C

YPL198W       RPL7B

YPL199C

YPL220W       RPL1A

YPL249C-A    RPL36B

YPR029C        APL4

YPR030W       CSR2

YPR042C        PUF2

YPR043W       RPL43A

YPR080W       TEF1

YPR102C        RPL11A

YPR103W       PRE2

YPR105C        COG4

YPR106W       ISR1

YPR110C        RPC40

YPR111W       DBF20

YPR161C        SGV1

 

Genes Not Found:

 

 

LSR1

SNR17A

SNR34

SNR40

SNR62

SNR72

SNR73

SNR74

SNR75

SNR76

SNR77

SNR78

TE%28UUC%29L

TK%28UUU%29D

TP%28AGG%29C

YBL071C-B

YGL188C-A

YGR027W-A

YGR027W-B

YLR264C-A

YMR230W-A

YMR242W-A

YNL067W-B

YOR161C-C

MIPS Functional Classification

Category          p-value In Category from Cluster          k          f

ribosome biogenesis      1e-14   RPL19B RPS8A RPL23A RPS11B RPL19A RPS6B RPS9B RPL21A RPS29B RPL31A RPL13A RPS16B RPP1B RPL41B RPL35B RPL41A RPL35A RPS13 RPS17B RPS18A RPL27B RPL37B RPL12A RPL34A RPS24A RPS8B RPL23B RPS26B RPL22B RPL2A RPL30 RPL24A RPL28 RPS2 RPL1B RPS26A RPS25A RPL26B RPL11B RPS23A RPS0A RPL14B RPL8A RPS27B RPS4B RPL2B RPL16A RPL40A RPS21B RPL39 RPS22A RPS14B RPS5 RPS4A RPL14A RPS27A RPL17A RPS21A RPL40B RPS0B RPL22A RPL10 RPS31 RPS30A RPS25B RPL26A RPS29A RPS1A RPL6B RPS17A YML025C RPS18B RPS1B RPL6A ASC1 RPL13B RPS16A RPL36A RPS10B RPL20A RPL9B RPL16B RPS7B RPS19B RPP2A RPS15 RPS19A RPL25 RPS7A RPL33B RPS10A RPL20B RPS12 RPS9A RPS6A RPL5 RPL7B RPL1A RPL36B RPL43A RPL11A             101      215

PROTEIN SYNTHESIS          1e-14   RPL19B RPS8A RPL23A RPS11B RPL19A TEF2 RPS6B RPS9B RPL21A RPS29B RPL31A RPL13A RPS16B RPP1B RPL41B RPL35B RPL41A RPL35A SSB1 KRS1 RPS13 RPS17B RPS18A RPL27B RPL37B RPL12A RPL34A RPS24A RPS8B RPL23B RPS26B FRS2 RPL22B RPL2A RPL30 RPL24A RPL28 RPS2 RPL1B RPS26A RPS25A RPL26B RPL11B RPS23A RPS0A RPL14B RPL8A RPS27B RPS4B RPL2B RPL16A RPL40A RPS21B RPL39 RPS22A RPS14B RPS5 RPS4A RPL14A RPS27A RPL17A RPS21A RPL40B UBI4 RPS0B RPL22A RPL10 RPS31 RPS30A RPS25B RPL26A RPS29A RPS1A RPL6B RPS17A YML025C RPS18B RPS1B RPL6A ASC1 RPL13B RPS16A RPL36A RPS10B RPL20A RPL9B RPL16B RPS7B RAP1 RPS19B RPP2A RPS15 RPS19A RPL25 RPS7A RPL33B RPS10A YOR302W RPL20B RPS12 RPS9A RPS6A RPL5 RPL7B RPL1A RPL36B RPL43A TEF1 RPL11A       109      359

cytoplasm         1e-14   RPL19B RPS8A RPL23A RPS11B RPL19A TKL2 TEF2 RPS6B RPS9B RPL21A GPD1 RPS29B RPL31A RPL13A RPS16B RPP1B RPL41B RPL35B RPL41A RPL35A SSB1 KRS1 RPS13 PRO1 ADE8 RPS17B RPS18A RPL27B RPL37B RPL12A RPL34A RPS24A RPS8B RPL23B RPS26B CCA1 FRS2 RPL30 RPL24A RPL28 RPS2 RPL1B RPS26A RPS25A RPL26B RPL11B RPS23A TDH3 RPS0A RPL14B RPL8A RPS27B RPS4B RPL2B RPL16A RPL40A RPS21B RPL39 RPS22A RPS14B RPS5 RPS4A RPL14A RPS27A RPL17A RPS21A RPL40B UBI4 PDC1 RPS0B RPL10 SEC10 RPS31 RPS30A RPS25B RPL26A RPS29A CAR2 RPS1A RPL6B RPS17A RPS18B RPS1B RPL6A ASC1 RPL13B RPS16A RPL36A RPS10B RPL20A RPL9B RPL16B RPS7B RPS19B RPP2A RPS15 RPS19A RPL25 RKI1 RPS7A UBP2 RPS10A YOR302W CPA1 RPL20B RPS12 RPS9A RPS6A RPL5 RPL7B RPL1A RPL36B RPL43A TEF1 RPL11A       115      554

SUBCELLULAR LOCALISATION   2.31593e-13    POP5 OAF1 PIM1 RPL19B RPS8A RPL23A RPS11B RPL19A AAC3 TKL2 TEF2 FZO1 RPS6B RPS9B RPL21A KCC4 AGP1 GPD1 RPS29B RPL31A RPL13A RPS16B RPP1B RPL41B RPL35B RPL41A RPL35A SSB1 KRS1 RPS13 PRO1 CFT1 ADE8 RPS17B ADA2 RPS18A RPL27B RPL37B GCN4 GEA2 RPL12A YPT31 RPL34A RPS24A RPS8B RPL23B RPS26B CCA1 GAT1 FRS2 YFL051C RPL30 RPL24A RCS1 HSF1 MPS2 RPL28 SNF4 RPS2 RPL1B RPS26A RPS25A RPL26B RPL11B RPS23A RNR4 TDH3 RPS0A RPL14B RPL8A RPS27B HXT5 RPS4B RPL2B RPL16A RPL40A MLP2 SIP4 DPB11 RPS21B RPL39 RPS22A RPS14B APS2 RPS5 RPS4A SFT1 RPL14A RPS27A STE3 RPL17A RPS21A SRP40 PTR2 RPL40B MLP1 FLO10 UBI4 PDC1 RPS0B RPL10 CDC45 SEC10 RPS31 HAP1 CTS1 RPS30A RPS25B RPL26A RPS29A CAR2 RPS1A VMA6 RPL6B RPS17A YML025C RPS18B RPS1B RPL6A SEC59 ERG5 ASC1 RPL13B RPS16A RPL36A RRP5 RPS10B PEP5 RPL20A ZRC1 RPL9B FKH2 RPL16B RPS7B YCK2 RAP1 RPS19B RPP2A RPS15 GPD2 RPS19A RPL25 RKI1 RPS7A UBP2 RPS10A YOR302W CPA1 RPL20B RPA43 RPA190 RPS12 SWI1 RPS9A MOT1 RPS6A RPL5 RPL7B RPL1A RPL36B RPL43A TEF1 RPL11A PRE2 RPC40          165            2256

 

 

 

MIPS Phenotypes

Category          p-value In Category from Cluster          k          f

 

 

 

MIPS Subcellular Localization

Category          p-value In Category from Cluster          k          f

cytoplasm         1e-14   RPL19B RPS8A RPL23A RPS11B RPL19A TKL2 TEF2 RPS6B RPS9B RPL21A SRO9 GPD1 RPS29B RPL31A RPL13A RPS16B RPP1B RPL41B RPL35B RPL41A RPL35A SSB1 KRS1 RPS13 PRO1 ADE8 RPS17B RPS18A RPL27B RPL37B RPL12A RPL34A RPS24A RPS8B RPL23B RPS26B CCA1 FRS2 RPL30 RPL24A RPL28 RPS2 RPL1B RPS26A RPS25A RPL26B RPL11B RPS23A TDH3 RPS0A RPL14B RPL8A RPS27B RPS4B RPL2B RPL16A RPL40A RPS21B RPL39 RPS22A RPS14B RPS5 RPS4A RPL14A RPS27A RPL17A RPS21A RPL40B UBI4 PDC1 RPS0B RPL22A RPL10 SEC10 RPS31 RPS30A RPS25B RPL26A RPS29A CAR2 RPS1A RPL6B RPS17A RPS18B RPS1B RPL6A ASC1 RPL13B RPS16A RPL36A RPS10B RPL20A RPL9B RPL16B RPS7B RPS19B RPP2A RPS15 RPS19A RPL25 RKI1 RPS7A UBP2 RPL33B RPS10A YOR302W CPA1 RPL20B RPS12 RPS9A RPS6A RPL5 RPL7B RPL1A RPL36B RPL43A TEF1 RPL11A    118      593

 

 

 

MIPS Protein Complexes

Category          p-value In Category from Cluster          k          f

cytoplasmic ribosomal small subunit       1e-14   RPS8A RPS11B RPS6B RPS9B RPS29B RPS16B RPS13 RPS17B RPS18A RPS24A RPS8B RPS26B RPS2 RPS26A RPS25A RPS23A RPS0A RPS27B RPS4B RPS21B RPS22A RPS14B RPS5 RPS4A RPS27A RPS21A RPS0B RPS31 RPS30A RPS25B RPS29A RPS1A RPS17A RPS18B RPS1B ASC1 RPS16A RPS10B RPS7B RPS19B RPS15 RPS19A RPS7A RPS10A RPS12 RPS9A RPS6A          47            57

Cytoplasmic ribosomes 1e-14   RPL19B RPS8A RPL23A RPS11B RPL19A RPS6B RPS9B RPL21A RPS29B RPL31A RPL13A RPS16B RPP1B RPL41B RPL35B RPL41A RPL35A RPS13 RPS17B RPS18A RPL27B RPL37B RPL12A RPL34A RPS24A RPS8B RPL23B RPS26B RPL22B RPL2A RPL30 RPL24A RPL28 RPS2 RPL1B RPS26A RPS25A RPL26B RPL11B RPS23A RPS0A RPL14B RPL8A RPS27B RPS4B RPL2B RPL16A RPL40A RPS21B RPL39 RPS22A RPS14B RPS5 RPS4A RPL14A RPS27A RPL17A RPS21A RPL40B RPS0B RPL22A RPL10 RPS31 RPS30A RPS25B RPL26A RPS29A RPS1A RPL6B RPS17A RPS18B RPS1B RPL6A ASC1 RPL13B RPS16A RPL36A RPS10B RPL20A RPL9B RPL16B RPS7B RPS19B RPP2A RPS15 RPS19A RPL25 RPS7A RPL33B RPS10A RPL20B RPS12 RPS9A RPS6A RPL5 RPL7B RPL1A RPL36B RPL43A RPL11A         100      138

cytoplasmic ribosomal large subunit       1e-14   RPL19B RPL23A RPL19A RPL21A RPL31A RPL13A RPP1B RPL41B RPL35B RPL41A RPL35A RPL27B RPL37B RPL12A RPL34A RPL23B RPL22B RPL2A RPL30 RPL24A RPL28 RPL1B RPL26B RPL11B RPL14B RPL8A RPL2B RPL16A RPL40A RPL39 RPL14A RPL17A RPL40B RPL22A RPL10 RPL26A RPL6B RPL6A RPL13B RPL36A RPL20A RPL9B RPL16B RPP2A RPL25 RPL33B RPL20B RPL5 RPL7B RPL1A RPL36B RPL43A RPL11A    53        81

Translation complexes   1e-14   RPL19B RPS8A RPL23A RPS11B RPL19A TEF2 RPS6B RPS9B RPL21A RPS29B RPL31A RPL13A RPS16B RPP1B RPL41B RPL35B RPL41A RPL35A RPS13 RPS17B RPS18A RPL27B RPL37B RPL12A RPL34A RPS24A RPS8B RPL23B RPS26B RPL22B RPL2A RPL30 RPL24A RPL28 RPS2 RPL1B RPS26A RPS25A RPL26B RPL11B RPS23A RPS0A RPL14B RPL8A RPS27B RPS4B RPL2B RPL16A RPL40A RPS21B RPL39 RPS22A RPS14B RPS5 RPS4A RPL14A RPS27A RPL17A RPS21A RPL40B RPS0B RPL22A RPL10 RPS31 RPS30A RPS25B RPL26A RPS29A RPS1A RPL6B RPS17A RPS18B RPS1B RPL6A ASC1 RPL13B RPS16A RPL36A RPS10B RPL20A RPL9B RPL16B RPS7B RPS19B RPP2A RPS15 RPS19A RPL25 RPS7A RPL33B RPS10A RPL20B RPS12 RPS9A RPS6A RPL5 RPL7B RPL1A RPL36B RPL43A TEF1 RPL11A           102            240

 

 

 

MIPS Protein Classes

Category          p-value In Category from Cluster          k          f

Ubiquitin           5.68422e-05    RPL40A RPL40B UBI4 RPS31          4          6

 

 

 

GO Molecular Function

Category          p-value In Category from Cluster          k          f

structural constituent of ribosome [GO:0003735]          1e-14   RPL19B RPS8A RPL23A RPS11B RPL19A RPS6B RPS9B RPL21A RPS29B RPL31A RPL13A RPS16B RPP1B RPL41B RPL35B RPL41A RPL35A RPS13 RPS17B RPS18A RPL27B RPL37B RPL12A RPL34A RPS24A RPS8B RPL23B RPS26B RPL22B RPL2A RPL30 RPL24A RPL28 RPS2 RPL1B RPS26A RPS25A RPL26B RPL11B RPS23A RPS0A RPL14B RPL8A RPS27B RPS4B RPL2B RPL16A RPL40A RPS21B RPL39 RPS22A RPS14B RPS5 RPS4A RPL14A RPS27A RPL17A RPS21A RPL40B RPS0B RPL22A RPL10 RPS31 RPS30A RPS25B RPL26A RPS29A RPS1A RPL6B RPS17A YML025C RPS18B RPS1B RPL6A RPL13B RPS16A RPL36A RPS10B RPL20A RPL9B RPL16B RPS7B RPS19B RPP2A RPS15 RPS19A RPL25 RPS7A RPL33B RPS10A RPL20B RPS12 RPS9A RPS6A RPL5 RPL7B RPL1A RPL36B RPL43A RPL11A          100      206

structural molecule [GO:0005198]        1e-14   RPL19B RPS8A RPL23A RPS11B RPL19A RPS6B RPS9B RPL21A RPS29B RPL31A RPL13A RPS16B RPP1B RPL41B RPL35B RPL41A RPL35A RPS13 RPS17B RPS18A RPL27B RPL37B RPL12A RPL34A RPS24A RPS8B RPL23B RPS26B RPL22B RPL2A RPL30 RPL24A MPS2 RPL28 RPS2 RPL1B RPS26A RPS25A RPL26B RPL11B RPS23A RPS0A RPL14B RPL8A RPS27B RPS4B RPL2B RPL16A RPL40A RPS21B RPL39 RPS22A RPS14B RPS5 RPS4A RPL14A RPS27A RPL17A RPS21A RPL40B RPS0B RPL22A RPL10 RPS31 RPS30A RPS25B RPL26A RPS29A CCW14 RPS1A RPL6B RPS17A YML025C RPS18B RPS1B RPL6A RPL13B RPS16A RPL36A RPS10B RPL20A RPL9B RPL16B RPS7B RPS19B RPP2A RPS15 RPS19A RPL25 RPS7A RPL33B RPS10A RPL20B RPS12 RPS9A RPS6A RPL5 RPL7B RPL1A RPL36B RPL43A RPL11A          102      310

 

 

 

GO Biological Process

Category          p-value In Category from Cluster          k          f

protein biosynthesis [GO:0006412]       1e-14   RPL19B RPS8A RPL23A RPS11B RPL19A TEF2 RPS6B RPS9B RPL21A SRO9 PSA1 RPS29B RPL31A RPL13A RPS16B RPP1B RPL41B RPL35B RPL41A PPH22 RPL35A SSB1 KRS1 RPS13 RPS17B RPS18A RPL27B RPL37B RPL12A RPL34A RPS24A RPS8B RPL23B RPS26B CCA1 FRS2 RPL22B RPL2A RPL30 RPL24A RPL28 RPS2 RPL1B RPS26A RPS25A RPL26B RPL11B RPS23A RPS0A RPL14B RPL8A RPS27B RPS4B RPL2B RPL16A RPL40A RPS21B RPL39 RPS22A RPS14B RPS5 RPS4A RPL14A RPS27A RPL17A RPS21A RPL40B RPS0B RPL22A RPL10 RPS31 RPS30A RPS25B RPL26A RPS29A RPS1A RPL6B RPS17A YML025C RPS18B RPS1B RPL6A SEC59 RPL13B RPS16A RPL36A RPS10B RPL20A RPL9B RPL16B RPS7B RPS19B RPP2A RPS15 RPS19A RPL25 RPS7A RPL33B RPS10A RPL20B RPS12 RPS9A RPS6A RPL5 RPL7B RPL1A RPL36B RPL43A TEF1 RPL11A       110      415

macromolecule biosynthesis [GO:0009059]      1e-14   RPL19B SKT5 RPS8A RPL23A RPS11B RPL19A TEF2 RPS6B RPS9B RPL21A SRO9 PSA1 RPS29B RPL31A RPL13A RPS16B RPP1B RPL41B RPL35B RPL41A PPH22 RPL35A SSB1 KRS1 RPS13 RPS17B RPS18A RPL27B RPL37B RPL12A RPL34A RPS24A RPS8B RPL23B RPS26B CCA1 FRS2 RPL22B RPL2A RPL30 RPL24A RPL28 RPS2 RPL1B RPS26A RPS25A RPL26B RPL11B RPS23A RPS0A RPL14B RPL8A RPS27B RPS4B RPL2B RPL16A RPL40A RPS21B RPL39 RPS22A RPS14B RPS5 RPS4A RPL14A RPS27A RPL17A RPS21A RPL40B RPS0B RPL22A RPL10 RPS31 RPS30A RPS25B RPL26A RPS29A RPS1A RPL6B RPS17A YML025C RPS18B RPS1B RPL6A SEC59 RPL13B RPS16A RPL36A RPS10B RPL20A RPL9B RPL16B RPS7B RPS19B RPP2A RPS15 RPS19A RPL25 RPS7A RPL33B RPS10A RPL20B RPS12 RPS9A RPS6A RPL5 RPL7B RPL1A RPL36B RPL43A TEF1 RPL11A    111      422

biosynthesis [GO:0009058]      1e-14   RPL19B SKT5 RPS8A RPL23A RPS11B RPL19A TEF2 RPS6B RPS9B RPL21A HIS4 SRO9 PSA1 RPS29B RPL31A RPL13A RPS16B RPP1B RPL41B RPL35B RPL41A PPH22 RPL35A SSB1 KRS1 RPS13 PRO1 ADE8 RPS17B RPS18A RPL27B RPL37B GCN4 RPL12A RPL34A RPS24A RPS8B RPL23B RPS26B CCA1 FRS2 RPL22B RPL2A RPL30 RPL24A RPL28 RPS2 RPL1B RPS26A RPS25A RPL26B RPL11B RPS23A TDH3 RPS0A RPL14B RPL8A RPS27B RPS4B RPL2B RHR2 RPL16A RPL40A SIP4 LCB3 RPS21B RPL39 RPS22A RPS14B RPS5 RPS4A RPL14A RPS27A RPL17A RPS21A RPL40B RPS0B RPL22A RPL10 RPS31 RPS30A RPS25B RPL26A RPS29A RPS1A RPL6B RPS17A YML025C RPS18B RPS1B RPL6A SEC59 ERG5 RPL13B RPS16A RPL36A RPS10B RPL20A RPL9B RPL16B RPS7B RPS19B RPP2A RPS15 RPS19A RPL25 RPS7A RPL33B RPS10A CPA1 RPL20B RPS12 RPS9A RPS6A RPL5 RPL7B RPL1A RPL36B RPL43A TEF1 RPL11A          121      731

protein metabolism [GO:0019538]        1e-14   PIM1 RPL19B AST1 RPS8A RPL23A RPS11B RPL19A TEF2 RPS6B RPS9B RPL21A KCC4 SRO9 PSA1 RPS29B RPL31A RPL13A RPS16B RPP1B RPL41B RPL35B RPL41A PPH22 RPL35A SSB1 KRS1 RPS13 SIZ1 RPS17B ADA2 RPS18A RPL27B RPL37B GEA2 RPL12A YPT31 RPL34A RPS24A RPS8B RPL23B RPS26B CCA1 FRS2 EPL1 RPL22B RPL2A RPL30 RPL24A RPL28 VPS73 RPS2 MON1 RPL1B RPS26A RPS25A RPL26B RPL11B RPS23A RPS0A RPL14B RPL8A RPS27B RPS4B MNL1 RPL2B RPL16A RPL40A MLP2 RPS21B RPL39 RPS22A RPS14B RPS5 RPS4A SFT1 RPL14A RPS27A LST4 RPL17A RPS21A RPL40B MLP1 UBI4 RPS0B RPL22A RPL10 SEC10 RPS31 RPS30A RPS25B RPL26A RPS29A RPS1A RPL6B RPS17A YML025C RPS18B RPS1B RPL6A SEC59 RPL13B RPS16A RPL36A RPS10B PEP5 RPL20A RPL9B RPL16B RPS7B YCK2 RPS19B RPP2A RPS15 CVT19 RPS19A RPL25 YGK3 NOB1 RPS7A UBP2 RPL33B RPS10A RPL20B VTS1 RPS12 RPS9A RPS6A RPL5 RPL7B RPL1A RPL36B RPL43A TEF1 RPL11A PRE2 COG4 DBF20 SGV1    138      1168

cell growth and/or maintenance [GO:0008151] 1.71974e-13    POP5 OAF1 PIM1 RPL19B SKT5 AST1 KTI11 RPS8A RPL23A RPS11B RPL19A AAC3 TKL2 TEF2 FZO1 RPS6B NTC20 RPS9B RPL21A KCC4 AGP1 HIS4 SRO9 GPD1 PSA1 TSR1 RPS29B RPL31A RPL13A RPS16B RPP1B RPL41B RPL35B SFA1 RPL41A PPH22 RPL35A SSB1 YDR036C KRS1 RPS13 PMP3 PRO1 CFT1 UTP4 YCG1 SHE9 ADE8 SIZ1 RPS17B ADA2 UTP6 RPS18A UGO1 RPL27B RPL37B GCN4 GEA2 RPL12A YPT31 FIR1 ACA1 SPO73 RPL34A RPS24A RPS8B SLX8 RPL23B RPS26B CCA1 RPH1 GAT1 FRS2 BUD27 EPL1 RPL22B RPL2A RPL30 RPL24A RCS1 HSF1 MPS2 GUP1 RPL28 VPS73 SNF4 RPS2 MON1 RPL1B MRM2 RPS26A RPS25A RPL26B RPL11B RPS23A RNR4 TDH3 RPS0A RPL14B RPL8A RPS27B ECM12 HXT5 RPS4B MNL1 RPL2B RHR2 RPL16A RPL40A MLP2 SIP4 DPB11 LCB3 RPS21B RPL39 RPS22A RPS14B APS2 PTK2 RPS5 HOM6 RPS4A HMS2 SFT1 RPL14A RPS27A ZRT3 LST4 STE3 RPL17A RPS21A SRP40 PTR2 RPL40B MLP1 UBI4 PDC1 RPS0B RPL22A BUD20 RPL10 CDC45 SEC10 RPS31 HAP1 CTS1 RPS30A RPS25B RPL26A RPS29A CCW14 CAR2 RPS1A VMA6 RPL6B RPS17A YML025C RPS18B RPS1B TEM1 RPL6A SEC59 BUD22 ERG5 RPL13B RPS16A RPL36A RRP5 RPS10B PEP5 RPL20A ZRC1 RPL9B FKH2 RPL16B RPS7B YCK2 RAP1 CAF40 RPS19B RPP2A RPS15 GPD2 MAM3 CVT19 RPS19A RPL25 YGK3 PFK27 WHI2 NOB1 SGT1 RKI1 RPS7A UBP2 RPL33B RPS10A CPA1 RPL20B RPA43 RPA190 MSC6 GDS1 VTS1 RPS12 SWI1 RPS9A MOT1 RPS6A RPL5 RPL7B RPL1A RPL36B APL4 CSR2 PUF2 RPL43A TEF1 RPL11A PRE2 COG4 RPC40 DBF20 SGV1             224      3657

metabolism [GO:0008152]       3.1164e-13      POP5 OAF1 PIM1 RPL19B SKT5 AST1 RPS8A RPL23A RPS11B RPL19A TKL2 TEF2 RPS6B NTC20 RPS9B RPL21A KCC4 HIS4 SRO9 PSA1 RPS29B RPL31A RPL13A RPS16B RPP1B RPL41B RPL35B SFA1 RPL41A PPH22 RPL35A SSB1 KRS1 RPS13 PRO1 CFT1 UTP4 ADE8 SIZ1 RPS17B ADA2 UTP6 RPS18A RPL27B RPL37B GCN4 GEA2 RPL12A YPT31 FIR1 ACA1 RPL34A RPS24A RPS8B SLX8 RPL23B RPS26B CCA1 RPH1 GAT1 FRS2 EPL1 RPL22B RPL2A RPL30 RPL24A RCS1 GUP1 RPL28 VPS73 SNF4 RPS2 MON1 RPL1B MRM2 RPS26A RPS25A RPL26B RPL11B RPS23A RNR4 TDH3 RPS0A RPL14B RPL8A RPS27B RPS4B MNL1 RPL2B RHR2 RPL16A RPL40A MLP2 SIP4 DPB11 LCB3 RPS21B RPL39 RPS22A RPS14B RPS5 HOM6 RPS4A SFT1 RPL14A RPS27A LST4 RPL17A RPS21A RPL40B MLP1 UBI4 PDC1 RPS0B RPL22A RPL10 CDC45 SEC10 RPS31 HAP1 RPS30A RPS25B RPL26A RPS29A CAR2 RPS1A RPL6B RPS17A YML025C RPS18B RPS1B RPL6A SEC59 ERG5 RPL13B RPS16A RPL36A RRP5 RPS10B PEP5 RPL20A ZRC1 RPL9B FKH2 RPL16B RPS7B YCK2 RAP1 CAF40 RPS19B RPP2A RPS15 GPD2 CVT19 RPS19A RPL25 YGK3 PFK27 NOB1 RKI1 RPS7A UBP2 RPL33B RPS10A CPA1 RPL20B RPA43 RPA190 MSC6 GDS1 VTS1 RPS12 SWI1 RPS9A MOT1 RPS6A RPL5 RPL7B RPL1A RPL36B PUF2 RPL43A TEF1 RPL11A PRE2 COG4 RPC40 DBF20 SGV1   189      2693

ribosomal subunit assembly [GO:0042257]       1.20013e-10    RPS11B RPS17B RPL12A RPL11B RPS0A RPS14B RPS0B RPL10 RPS31 RPL6B RPS17A YML025C RPL6A RPL25 RPL5 RPL11A 16        48

ribosome assembly [GO:0042255]       2.41422e-10    RPS11B RPS17B RPL12A RPL11B RPS0A RPS14B RPS0B RPL10 RPS31 RPL6B RPS17A YML025C RPL6A RPL25 RPL5 RPL11A 16        50

ribosomal small subunit assembly and maintenance [GO:0000028]         4.8328e-07      RPS11B RPS17B RPS0A RPS14B RPS0B RPS31 RPS17A       7          13

regulation of translational fidelity [GO:0006450]            3.53501e-06    RPS11B RPS9B RPS2 RPS23A RPS9A         5            7

ribosome biogenesis and assembly [GO:0042254]        4.06803e-06    POP5 RPS11B TSR1 UTP4 RPS17B UTP6 RPL12A RPL30 RPL11B RPS0A RPS14B RPS0B RPL10 RPS31 RPL6B RPS17A YML025C RPL6A RRP5 RPL25 RPL5 RPL11A            22        165

ribosomal large subunit assembly and maintenance [GO:0000027]         1.72115e-05    RPL12A RPL11B RPL10 RPL6B YML025C RPL6A RPL25 RPL5 RPL11A     9          35

 

 

 

GO Cellular Component

Category          p-value In Category from Cluster          k          f

eukaryotic 48S initiation complex [GO:0016283]          1e-14   RPS8A RPS11B RPS6B RPS9B RPS29B RPS16B RPS13 RPS17B RPS18A RPS24A RPS8B RPS26B RPS2 RPS26A RPS25A RPS23A RPS0A RPS27B RPS4B RPS21B RPS22A RPS14B RPS5 RPS4A RPS27A RPS21A RPS0B RPS31 RPS30A RPS25B RPS29A RPS1A RPS17A RPS18B RPS1B RPS16A RPS10B RPS7B RPS19B RPS15 RPS19A RPS7A RPS10A RPS12 RPS9A RPS6A            46        61

cytosolic small ribosomal subunit (sensu Eukarya) [GO:0005843]          1e-14   RPS8A RPS11B RPS6B RPS9B RPS29B RPS16B RPS13 RPS17B RPS18A RPS24A RPS8B RPS26B RPS2 RPS26A RPS25A RPS23A RPS0A RPS27B RPS4B RPS21B RPS22A RPS14B RPS5 RPS4A RPS27A RPS21A RPS0B RPS31 RPS30A RPS25B RPS29A RPS1A RPS17A RPS18B RPS1B RPS16A RPS10B RPS7B RPS19B RPS15 RPS19A RPS7A RPS10A RPS12 RPS9A RPS6A            46        61

eukaryotic 43S pre-initiation complex [GO:0016282]    1e-14   RPS8A RPS11B RPS6B RPS9B RPS29B RPS16B RPS13 RPS17B RPS18A RPS24A RPS8B RPS26B RPS2 RPS26A RPS25A RPS23A RPS0A RPS27B RPS4B RPS21B RPS22A RPS14B RPS5 RPS4A RPS27A RPS21A RPS0B RPS31 RPS30A RPS25B RPS29A RPS1A RPS17A RPS18B RPS1B RPS16A RPS10B RPS7B RPS19B RPS15 RPS19A RPS7A RPS10A RPS12 RPS9A RPS6A            46        67

cytosolic ribosome (sensu Eukarya) [GO:0005830]       1e-14   RPL19B RPS8A RPL23A RPS11B RPL19A RPS6B RPS9B RPL21A RPS29B RPL31A RPL13A RPS16B RPP1B RPL41B RPL35B RPL41A RPL35A RPS13 RPS17B RPS18A RPL27B RPL37B RPL12A RPL34A RPS24A RPS8B RPL23B RPS26B RPL22B RPL2A RPL30 RPL24A RPL28 RPS2 RPL1B RPS26A RPS25A RPL26B RPL11B RPS23A RPS0A RPL14B RPL8A RPS27B RPS4B RPL2B RPL16A RPL40A RPS21B RPL39 RPS22A RPS14B RPS5 RPS4A RPL14A RPS27A RPL17A RPS21A RPL40B RPS0B RPL22A RPL10 RPS31 RPS30A RPS25B RPL26A RPS29A RPS1A RPL6B RPS17A RPS18B RPS1B RPL6A RPL13B RPS16A RPL36A RPS10B RPL20A RPL9B RPL16B RPS7B RPS19B RPP2A RPS15 RPS19A RPL25 RPS7A RPL33B RPS10A RPL20B RPS12 RPS9A RPS6A RPL5 RPL7B RPL1A RPL36B RPL43A RPL11A             99        151

cytosolic large ribosomal subunit (sensu Eukarya) [GO:0005842]          1e-14   RPL19B RPL23A RPL19A RPL21A RPL31A RPL13A RPP1B RPL41B RPL35B RPL41A RPL35A RPL27B RPL37B RPL12A RPL34A RPL23B RPL22B RPL2A RPL30 RPL24A RPL28 RPL1B RPL26B RPL11B RPL14B RPL8A RPL2B RPL16A RPL40A RPL39 RPL14A RPL17A RPL40B RPL22A RPL10 RPL26A RPL6B RPL6A RPL13B RPL36A RPL20A RPL9B RPL16B RPP2A RPL25 RPL33B RPL20B RPL5 RPL7B RPL1A RPL36B RPL43A RPL11A            53        83

small ribosomal subunit [GO:0015935] 1e-14   RPS8A RPS11B RPS6B RPS9B RPS29B RPS16B RPS13 RPS17B RPS18A RPS24A RPS8B RPS26B RPS2 RPS26A RPS25A RPS23A RPS0A RPS27B RPS4B RPS21B RPS22A RPS14B RPS5 RPS4A RPS27A RPS21A RPS0B RPS31 RPS30A RPS25B RPS29A RPS1A RPS17A RPS18B RPS1B RPS16A RPS10B RPS7B RPS19B RPS15 RPS19A RPS7A RPS10A RPS12 RPS9A RPS6A         46        88

large ribosomal subunit [GO:0015934]  1e-14   RPL19B RPL23A RPL19A RPL21A RPL31A RPL13A RPP1B RPL41B RPL35B RPL41A RPL35A RPL27B RPL37B RPL12A RPL34A RPL23B RPL22B RPL2A RPL30 RPL24A RPL28 RPL1B RPL26B RPL11B RPL14B RPL8A RPL2B RPL16A RPL40A RPL39 RPL14A RPL17A RPL40B RPL22A RPL10 RPL26A RPL6B YML025C RPL6A RPL13B RPL36A RPL20A RPL9B RPL16B RPP2A RPL25 RPL33B RPL20B RPL5 RPL7B RPL1A RPL36B RPL43A RPL11A   54        122

ribosome [GO:0005840]          1e-14   RPL19B RPS8A RPL23A RPS11B RPL19A TEF2 RPS6B RPS9B RPL21A SRO9 RPS29B RPL31A RPL13A RPS16B RPP1B RPL41B RPL35B RPL41A RPL35A SSB1 RPS13 RPS17B RPS18A RPL27B RPL37B RPL12A RPL34A RPS24A RPS8B RPL23B RPS26B RPL22B RPL2A RPL30 RPL24A RPL28 RPS2 RPL1B RPS26A RPS25A RPL26B RPL11B RPS23A RPS0A RPL14B RPL8A RPS27B RPS4B RPL2B RPL16A RPL40A RPS21B RPL39 RPS22A RPS14B RPS5 RPS4A RPL14A RPS27A RPL17A RPS21A RPL40B RPS0B RPL22A RPL10 RPS31 RPS30A RPS25B RPL26A RPS29A RPS1A RPL6B RPS17A YML025C RPS18B RPS1B RPL6A RPL13B RPS16A RPL36A RPS10B RPL20A RPL9B RPL16B RPS7B RPS19B RPP2A RPS15 RPS19A RPL25 RPS7A RPL33B RPS10A RPL20B RPS12 RPS9A RPS6A RPL5 RPL7B RPL1A RPL36B RPL43A TEF1 RPL11A             104      258

cytosol [GO:0005829] 1e-14   RPL19B RPS8A RPL23A RPS11B RPL19A RPS6B RPS9B RPL21A RPS29B RPL31A RPL13A RPS16B RPP1B RPL41B RPL35B RPL41A RPL35A RPS13 RPS17B RPS18A RPL27B RPL37B RPL12A RPL34A RPS24A RPS8B RPL23B RPS26B RPL22B RPL2A RPL30 RPL24A RPL28 RPS2 RPL1B RPS26A RPS25A RPL26B RPL11B RPS23A TDH3 RPS0A RPL14B RPL8A RPS27B RPS4B RPL2B RPL16A RPL40A RPS21B RPL39 RPS22A RPS14B RPS5 RPS4A RPL14A RPS27A RPL17A RPS21A RPL40B RPS0B RPL22A RPL10 RPS31 RPS30A RPS25B RPL26A RPS29A RPS1A RPL6B RPS17A RPS18B RPS1B RPL6A RPL13B RPS16A RPL36A RPS10B RPL20A RPL9B RPL16B RPS7B RPS19B RPP2A RPS15 GPD2 RPS19A RPL25 NOB1 RPS7A RPL33B RPS10A CPA1 RPL20B VTS1 RPS12 RPS9A RPS6A RPL5 RPL7B RPL1A RPL36B RPL43A RPL11A PRE2       105      310

ribonucleoprotein complex [GO:0030529]        1e-14   POP5 RPL19B RPS8A RPL23A RPS11B RPL19A TEF2 RPS6B NTC20 RPS9B RPL21A SRO9 RPS29B RPL31A RPL13A RPS16B RPP1B RPL41B RPL35B RPL41A RPL35A SSB1 RPS13 UTP4 RPS17B UTP6 RPS18A RPL27B RPL37B RPL12A RPL34A RPS24A RPS8B RPL23B RPS26B RPL22B RPL2A RPL30 RPL24A RPL28 RPS2 RPL1B RPS26A RPS25A RPL26B RPL11B RPS23A RPS0A RPL14B RPL8A RPS27B RPS4B RPL2B RPL16A RPL40A RPS21B RPL39 RPS22A RPS14B RPS5 RPS4A RPL14A RPS27A RPL17A RPS21A RPL40B RPS0B RPL22A RPL10 RPS31 RPS30A RPS25B RPL26A RPS29A RPS1A RPL6B RPS17A YML025C RPS18B RPS1B RPL6A RPL13B RPS16A RPL36A RRP5 RPS10B RPL20A RPL9B RPL16B RPS7B RPS19B RPP2A RPS15 RPS19A RPL25 RPS7A RPL33B RPS10A RPL20B RPS12 RPS9A RPS6A RPL5 RPL7B RPL1A RPL36B RPL43A TEF1 RPL11A       109      380

cell [GO:0005623]       1.00253e-13    POP5 OAF1 PIM1 RPL19B SKT5 AST1 RPS8A RPL23A RPS11B RPL19A AAC3 TEF2 FZO1 RPS6B NTC20 RPS9B RPL21A KCC4 AGP1 HIS4 SRO9 GPD1 PSA1 TSR1 RPS29B RPL31A RPL13A RPS16B RPP1B RPL41B RPL35B RPL41A RPL35A SSB1 KRS1 RPS13 PMP3 CFT1 UTP4 YCG1 SHE9 SIZ1 RPS17B ADA2 UTP6 RPS18A UGO1 RPL27B RPL37B GCN4 GEA2 RPL12A ACA1 RPL34A RPS24A AST2 RPS8B SLX8 RPL23B RPS26B CCA1 RPH1 GAT1 FRS2 EPL1 RPL22B RPL2A RPL30 RPL24A RCS1 HSF1 MPS2 GUP1 RPL28 SNF4 RPS2 RPL1B MRM2 RPS26A RPS25A RPL26B RPL11B RPS23A RNR4 TDH3 RTA1 RPS0A RPL14B RPL8A RPS27B YHR033W HXT5 RPS4B MNL1 RPL2B RPL16A RPL40A MLP2 SIP4 DPB11 LCB3 RPS21B RPL39 RPS22A RPS14B APS2 RPS5 RPS4A SFT1 RPL14A RPS27A ZRT3 LST4 STE3 RPL17A RPS21A SRP40 PTR2 RPL40B MLP1 UBI4 RPS0B RPL22A BUD20 RPL10 CDC45 SEC10 RPS31 HAP1 CTS1 RPS30A RPS25B RPL26A RPS29A YLR437C CAR2 RPS1A VMA6 RPL6B RPS17A YML025C RPS18B RPS1B TEM1 RPL6A SEC59 BUD22 ERG5 ASC1 RPL13B RPS16A YMR144W RPL36A RRP5 RPS10B PEP5 RPL20A ZRC1 RPL9B FKH2 RPL16B RPS7B YCK2 RAP1 CAF40 RPS19B RPP2A RPS15 GPD2 CVT19 RPS19A RPL25 PFK27 NOB1 SGT1 RPS7A UBP2 RPL33B RPS10A CPA1 RPL20B RPA43 RPA190 VTS1 RPS12 SWI1 RPS9A MOT1 RPS6A RPL5 RPL7B RPL1A RPL36B APL4 RPL43A TEF1 RPL11A PRE2 COG4 RPC40 SGV1             201            3106

intracellular [GO:0005622]       1.33893e-13    POP5 OAF1 PIM1 RPL19B SKT5 RPS8A RPL23A RPS11B RPL19A AAC3 TEF2 FZO1 RPS6B NTC20 RPS9B RPL21A AGP1 SRO9 GPD1 PSA1 TSR1 RPS29B RPL31A RPL13A RPS16B RPP1B RPL41B RPL35B RPL41A RPL35A SSB1 KRS1 RPS13 PMP3 CFT1 UTP4 YCG1 SHE9 SIZ1 RPS17B ADA2 UTP6 RPS18A UGO1 RPL27B RPL37B GCN4 GEA2 RPL12A ACA1 RPL34A RPS24A AST2 RPS8B SLX8 RPL23B RPS26B CCA1 RPH1 GAT1 FRS2 EPL1 RPL22B RPL2A RPL30 RPL24A RCS1 HSF1 MPS2 RPL28 SNF4 RPS2 RPL1B MRM2 RPS26A RPS25A RPL26B RPL11B RPS23A RNR4 TDH3 RPS0A RPL14B RPL8A RPS27B YHR033W HXT5 RPS4B MNL1 RPL2B RPL16A RPL40A MLP2 SIP4 DPB11 LCB3 RPS21B RPL39 RPS22A RPS14B APS2 RPS5 RPS4A SFT1 RPL14A RPS27A ZRT3 LST4 STE3 RPL17A RPS21A SRP40 PTR2 RPL40B MLP1 UBI4 RPS0B RPL22A BUD20 RPL10 CDC45 SEC10 RPS31 HAP1 CTS1 RPS30A RPS25B RPL26A RPS29A YLR437C CAR2 RPS1A VMA6 RPL6B RPS17A YML025C RPS18B RPS1B TEM1 RPL6A BUD22 ERG5 ASC1 RPL13B RPS16A YMR144W RPL36A RRP5 RPS10B PEP5 RPL20A ZRC1 RPL9B FKH2 RPL16B RPS7B YCK2 RAP1 CAF40 RPS19B RPP2A RPS15 GPD2 CVT19 RPS19A RPL25 PFK27 NOB1 SGT1 RPS7A UBP2 RPL33B RPS10A CPA1 RPL20B RPA43 RPA190 VTS1 RPS12 SWI1 RPS9A MOT1 RPS6A RPL5 RPL7B RPL1A RPL36B APL4 RPL43A TEF1 RPL11A PRE2 COG4 RPC40 SGV1             195      2921

cytoplasm [GO:0005737]         2.38032e-13    PIM1 RPL19B SKT5 RPS8A RPL23A RPS11B RPL19A AAC3 TEF2 FZO1 RPS6B RPS9B RPL21A SRO9 GPD1 PSA1 RPS29B RPL31A RPL13A RPS16B RPP1B RPL41B RPL35B RPL41A RPL35A SSB1 KRS1 RPS13 SHE9 RPS17B RPS18A UGO1 RPL27B RPL37B GEA2 RPL12A RPL34A RPS24A AST2 RPS8B RPL23B RPS26B CCA1 FRS2 RPL22B RPL2A RPL30 RPL24A RCS1 MPS2 RPL28 SNF4 RPS2 RPL1B MRM2 RPS26A RPS25A RPL26B RPL11B RPS23A TDH3 RPS0A RPL14B RPL8A RPS27B YHR033W RPS4B MNL1 RPL2B RPL16A RPL40A LCB3 RPS21B RPL39 RPS22A RPS14B APS2 RPS5 RPS4A SFT1 RPL14A RPS27A ZRT3 LST4 RPL17A RPS21A RPL40B UBI4 RPS0B RPL22A RPL10 SEC10 RPS31 CTS1 RPS30A RPS25B RPL26A RPS29A YLR437C CAR2 RPS1A VMA6 RPL6B RPS17A YML025C RPS18B RPS1B TEM1 RPL6A ERG5 ASC1 RPL13B RPS16A RPL36A RPS10B PEP5 RPL20A ZRC1 RPL9B RPL16B RPS7B RPS19B RPP2A RPS15 GPD2 CVT19 RPS19A RPL25 PFK27 NOB1 RPS7A UBP2 RPL33B RPS10A CPA1 RPL20B VTS1 RPS12 RPS9A RPS6A RPL5 RPL7B RPL1A RPL36B APL4 RPL43A TEF1 RPL11A PRE2 COG4             150      1810

 

 

 

SMART Domains

Category          p-value In Category from Cluster          k          f

 

 

 

PFam-A Domains

Category          p-value In Category from Cluster          k          f

PF00467 (KOW)        2.31979e-07    RPL27B RPL26B RPL14B RPS4B RPS4A RPL14A RPL26A           7          12

 

 

 

Yeast Two Hybrid - Uetz

Category          p-value In Category from Cluster          k          f

 

 

 

Yeast Two Hybrid - Ito (core)

Category          p-value In Category from Cluster          k          f

 

 

 

Yeast Two Hybrid - Ito (full)

Category          p-value In Category from Cluster          k          f

 

 

 

Synthetic Genetic Array Analysis

Category          p-value In Category from Cluster          k          f

 

 

 

MDS Proteomics Complexes

Category          p-value In Category from Cluster          k          f

YPL022W (RAD1)      9.42372e-05    GPD1 UTP4 YHR033W UBI4 CAR2 GPD2 6          18

 

 

 

Cellzome Complexes

Category          p-value In Category from Cluster          k          f

YBR031W (RPL4A)   2.90001e-12    RPL13A RPL27B RPL28 RPL11B RPL2B RPS14B RPL17A RPL10 RPL6A RPL13B RPL20A RPL16B RPL25 RPL20B RPL7B RPL36B            16        39

 

 

 

Proteome Localization--Observed

Category          p-value In Category from Cluster          k          f

cyto      6.60785e-05    FUN19 OAF1 RPL19B YBL029C-A RPS8A RPL19A TEF2 RPS6B AGP1 HIS4 GPD1 PSA1 RPL31A RPL13A SFA1 RPL41A PPH22 SSB1 KRS1 PRO1 RPS17B RPS18A YEL007W GEA2 ZRG8 YER034W AST2 RPL23B RPS26B FRS2 BUD27 RPL22B RPL24A SNF4 RPS2 RPL1B RPS26A RPL26B RPL11B YGR117C RPS23A TDH3 RPL8A YHR033W RHR2 RPL16A YJL049W RPS22A RPS5 HOM6 RPS4A SFT1 RPL14A RPS27A RPL17A UBI4 PDC1 RPL22A RPL10 RPS31 RPS30A RPL26A YLR437C CAR2 ASC1 RPS16A YNL010W YNL011C RPL9B RPL16B RPS7B RPS15 MAM3 YOL109W RPL25 YGK3 PFK27 WHI2 VTS1 RPS9A RPL5 RPL7B YPL199C CSR2 PUF2 TEF1 RPL11A            87        1324

 

 

 

Proteome Localization--Predicted+Observed

Category          p-value In Category from Cluster          k          f

cyt        2.0744e-06      FUN19 OAF1 RPL19B YBL029W YBL060W SKT5 AST1 RPS8A RPL23A RPS11B AAC3 TKL2 TEF2 FZO1 DTR1 RPS6B RPS9B RPL21A AGP1 HIS4 SRO9 GPD1 PSA1 TSR1 RPS29B RPL31A RXT3 RPL13A RPS16B RPP1B YDL133W RPL35B SFA1 UGX2 RPL41A YDL186W PPH22 RPL35A SSB1 KRS1 RPS13 PMP3 PRO1 ADE8 RPS17B UTP6 RPS18A UGO1 RPL27B RPL37B YEL007W GEA2 YEL023C RPL12A ZRG8 YER034W SPO73 RPS24A AST2 RPS8B SLX8 RPL23B RPS26B FRS2 BUD27 RPL30 RPL24A RPL28 RPS2 MON1 RPL1B RPS26A RPS25A YGR033C RPL26B RPL11B YGR117C RPS23A TDH3 RPS0A RPL14B RPL8A RPS27B YHR033W HXT5 YHR122W RPS4B MNL1 RPL2B RHR2 YIL055C RPL16A RPL40A YJL049W SIP4 RPS21B RPL39 RPS22A RPS14B RPS5 HOM6 RPS4A RPL14A RPS27A RPL17A RPS21A PTR2 RPL40B UBI4 PDC1 RPS0B RPL22A RPL10 RPS31 YLR254C RPS25B RPL26A YLR387C RPS29A YLR437C CAR2 RPS1A VMA6 RPL6B RPS17A RPS18B RPS1B RPL6A ASC1 RPL13B RPS16A RPL36A RPS10B PEP5 RPL20A YMR265C YNL010W YNL011C RPL9B RPL16B RPS7B YNL101W YCK2 CAF40 RPS19B RPP2A RPS15 YOL109W RPS19A RPL25 YGK3 PFK27 WHI2 SGT1 RKI1 RPS7A UBP2 YOR161C YOR179C RPL33B YOR292C RPS10A CPA1 RPL20B VTS1 SCP1 RPS12 YPL017C RPS9A RPS6A RPL5 YPL162C RPL7B YPL199C RPL1A CSR2 PUF2 RPL43A TEF1 RPL11A PRE2 COG4 DBF20         183      3210

 

 

 

Deletions Consortium (Essentiality, Morphology)

Category          p-value In Category from Cluster          k          f

 

 

 

Yeast Fitness Data

Category          p-value In Category from Cluster          k          f

Slow Growers  2.22806e-06    RPL19B RPS11B RPL19A FZO1 RPS6B RPS9B RPL21A RPS29B RPL31A RPL35A PMP3 PRO1 RPS18A RPL34A RPS24A SLX8 RPL23B BUD27 RCS1 GUP1 SNF4 RPL1B RPS23A RNR4 RPS27B RPS4B RPS21B RPL39 RPS4A RPL14A SRP40 PDC1 YLR047C RPL22A BUD20 VMA6 RPL6B RPS17A RPS1B RPL6A BUD22 ASC1 RPL13B RPS16A RSN1 RPL16B RPS19B RPS19A RPS7A RPS10A YPL017C RPS6A RPL43A          53        617

 

 

 

Published Complexes

Category          p-value In Category from Cluster          k          f

Andersen et al. (2002) - Curr Bio 12:1-            1.04639e-12    RPS6B RPS9B RPL31A RPS13 RPL27B RPS8B RPL28 RPL1B RPL26B RPL11B RPS0A RPL14B RPL2B RPL16A RPS5 RPS4A RPL17A SRP40 UBI4 RPL22A RPL6B RPS18B RPS1B RPL13B RPS16A RRP5 RPL9B RPL25 RPA190 RPS12 RPL5 RPC40     32        165

Harnicharnpai et al. (2001) - Mol Cell 8:505-   0.000668009   SSB1 RPS2 TDH3 RPS22A RPL10 RPS15 RPL5      7            34

 

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Rap1-PBMandLiebChIP-2SD.FunSpec.txt

 Input Cluster (n=211)

YAL033W       POP5

YAL034C        FUN19

YBL022C        PIM1

YBL027W       RPL19B

YBL028C

YBL029C-A

YBL029W

YBL060W

YBL061C        SKT5

YBL069W       AST1

YBL071W-A   KTI11

YBL072C        RPS8A

YBR048W       RPS11B

YBR117C        TKL2

YBR118W       TEF2

YBR179C        FZO1

YBR180W       DTR1

YBR181C        RPS6B

YBR188C        NTC20

YBR189W       RPS9B

YCL024W       KCC4

YCL025C        AGP1

YCL030C        HIS4

YCL036W       GFD2

YCL037C        SRO9

YDL022W       GPD1

YDL060W       TSR1

YDL061C        RPS29B

YDL075W       RPL31A

YDL076C        RXT3

YDL082W       RPL13A

YDL083C        RPS16B

YDL130W       RPP1B

YDL133C-A   RPL41B

YDL133W

YDL136W       RPL35B

YDL184C        RPL41A

YDL186W

YDL188C        PPH22

YDL191W       RPL35A

YDL229W       SSB1

YDR036C

YDR037W      KRS1

YDR276C       PMP3

YDR300C       PRO1

YDR301W      CFT1

YDR393W      SHE9

YDR408C       ADE8

YDR409W      SIZ1

YDR447C       RPS17B

YDR448W      ADA2

YDR449C       UTP6

YDR450W      RPS18A

YDR470C       UGO1

YDR471W      RPL27B

YDR500C       RPL37B

YDR501W      PLM2

YEL007W

YEL009C        GCN4

YEL022W       GEA2

YEL023C

YEL054C        RPL12A

YER033C        ZRG8

YER034W

YER056C-A    RPL34A

YER074W       RPS24A

YER101C        AST2

YER102W       RPS8B

YER116C        SLX8

YER117W       RPL23B

YER168C        CCA1

YER169W       RPH1

YFL023W       BUD27

YFL024C        EPL1

YFR031C-A    RPL2A

YGL030W       RPL30

YGL031C        RPL24A

YGL073W       HSF1

YGL075C        MPS2

YGL083W       SCY1

YGL084C        GUP1

YGL103W       RPL28

YGL104C        VPS73

YGL115W       SNF4

YGL123W       RPS2

YGL124C        MON1

YGL189C        RPS26A

YGR027C       RPS25A

YGR033C

YGR034W      RPL26B

YGR085C       RPL11B

YGR117C

YGR118W      RPS23A

YGR192C       TDH3

YHL001W       RPL14B

YHL033C        RPL8A

YHR021C       RPS27B

YHR021W-A  ECM12

YHR033W

YHR096C       HXT5

YHR122W

YHR203C       RPS4B

YHR204W      MNL1

YIL018W        RPL2B

YIL053W        RHR2

YIL055C

YIL148W        RPL40A

YIL149C         MLP2

YJL049W

YJL089W        SIP4

YJL090C         DPB11

YJL134W        LCB3

YJL136C         RPS21B

YJL189W        RPL39

YJL190C         RPS22A

YJL191W        RPS14B

YJL192C

YJR058C         APS2

YJR059W        PTK2

YJR123W        RPS5

YJR139C         HOM6

YKL006C-A   SFT1

YKL006W      RPL14A

YKL156W      RPS27A

YKL178C       STE3

YKL180W      RPL17A

YKR057W      RPS21A

YKR094C       RPL40B

YKR095W      MLP1

YLL039C        UBI4

YLR044C        PDC1

YLR047C

YLR048W       RPS0B

YLR061W       RPL22A

YLR074C        BUD20

YLR075W       RPL10

YLR286C        CTS1

YLR333C        RPS25B

YLR387C

YLR388W       RPS29A

YLR390W-A   CCW14

YLR437C

YLR438W       CAR2

YLR447C        VMA6

YLR448W       RPL6B

YML024W      RPS17A

YML025C

YML026C       RPS18B

YML073C       RPL6A

YMR013C       SEC59

YMR013W-A

YMR014W      BUD22

YMR015C       ERG5

YMR116C       ASC1

YMR142C       RPL13B

YMR143W      RPS16A

YMR144W

YMR194W      RPL36A

YMR229C       RRP5

YMR230W      RPS10B

YMR231W      PEP5

YMR242C       RPL20A

YMR243C       ZRC1

YMR244W

YNL010W

YNL011C

YNL069C       RPL16B

YNL101W

YNL154C       YCK2

YNL216W      RAP1

YNL253W

YNL254C

YNL302C       RPS19B

YOL039W      RPP2A

YOL040C       RPS15

YOL059W      GPD2

YOL060C       MAM3

YOL109W

YOL121C       RPS19A

YOL127W      RPL25

YOL128C       YGK3

YOL136C       PFK27

YOR043W      WHI2

YOR056C       NOB1

YOR057W      SGT1

YOR095C       RKI1

YOR096W      RPS7A

YOR124C       UBP2

YOR292C

YOR293W      RPS10A

YOR312C       RPL20B

YOR340C       RPA43

YOR341W      RPA190

YOR365C

YOR367W      SCP1

YOR369C       RPS12

YPL081W       RPS9A

YPL082C        MOT1

YPL090C        RPS6A

YPL131W       RPL5

YPL198W       RPL7B

YPL199C

YPL220W       RPL1A

YPR080W       TEF1

YPR102C        RPL11A

YPR103W       PRE2

YPR105C        COG4

YPR106W       ISR1

YPR110C        RPC40

YPR111W       DBF20

YPR161C        SGV1

 

Genes Not Found:

 

SNR34

SNR62

SNR72

SNR73

SNR74

SNR75

SNR76

SNR77

SNR78

TE%28UUC%29L

YBL071C-B

YGL188C-A

YGR027W-A

YGR027W-B

YLR264C-A

YMR230W-A

YMR242W-A

MIPS Functional Classification

Category          p-value In Category from Cluster          k          f

ribosome biogenesis      1e-14   RPL19B RPS8A RPS11B RPS6B RPS9B RPS29B RPL31A RPL13A RPS16B RPP1B RPL41B RPL35B RPL41A RPL35A RPS17B RPS18A RPL27B RPL37B RPL12A RPL34A RPS24A RPS8B RPL23B RPL2A RPL30 RPL24A RPL28 RPS2 RPS26A RPS25A RPL26B RPL11B RPS23A RPL14B RPL8A RPS27B RPS4B RPL2B RPL40A RPS21B RPL39 RPS22A RPS14B RPS5 RPL14A RPS27A RPL17A RPS21A RPL40B RPS0B RPL22A RPL10 RPS25B RPS29A RPL6B RPS17A YML025C RPS18B RPL6A ASC1 RPL13B RPS16A RPL36A RPS10B RPL20A RPL16B RPS19B RPP2A RPS15 RPS19A RPL25 RPS7A RPS10A RPL20B RPS12 RPS9A RPS6A RPL5 RPL7B RPL1A RPL11A          81        215

PROTEIN SYNTHESIS          1e-14   RPL19B RPS8A RPS11B TEF2 RPS6B RPS9B RPS29B RPL31A RPL13A RPS16B RPP1B RPL41B RPL35B RPL41A RPL35A SSB1 KRS1 RPS17B RPS18A RPL27B RPL37B RPL12A RPL34A RPS24A RPS8B RPL23B RPL2A RPL30 RPL24A RPL28 RPS2 RPS26A RPS25A RPL26B RPL11B RPS23A RPL14B RPL8A RPS27B RPS4B RPL2B RPL40A RPS21B RPL39 RPS22A RPS14B RPS5 RPL14A RPS27A RPL17A RPS21A RPL40B UBI4 RPS0B RPL22A RPL10 RPS25B RPS29A RPL6B RPS17A YML025C RPS18B RPL6A ASC1 RPL13B RPS16A RPL36A RPS10B RPL20A RPL16B RAP1 RPS19B RPP2A RPS15 RPS19A RPL25 RPS7A RPS10A RPL20B RPS12 RPS9A RPS6A RPL5 RPL7B RPL1A TEF1 RPL11A   87        359

SUBCELLULAR LOCALISATION   1e-14   POP5 PIM1 RPL19B RPS8A RPS11B TKL2 TEF2 FZO1 RPS6B RPS9B KCC4 AGP1 GPD1 RPS29B RPL31A RPL13A RPS16B RPP1B RPL41B RPL35B RPL41A RPL35A SSB1 KRS1 PRO1 CFT1 ADE8 RPS17B ADA2 RPS18A RPL27B RPL37B GCN4 GEA2 RPL12A RPL34A RPS24A RPS8B RPL23B CCA1 RPL30 RPL24A HSF1 MPS2 RPL28 SNF4 RPS2 RPS26A RPS25A RPL26B RPL11B RPS23A TDH3 RPL14B RPL8A RPS27B HXT5 RPS4B RPL2B RPL40A MLP2 SIP4 DPB11 RPS21B RPL39 RPS22A RPS14B APS2 RPS5 SFT1 RPL14A RPS27A STE3 RPL17A RPS21A RPL40B MLP1 UBI4 PDC1 RPS0B RPL10 CTS1 RPS25B RPS29A CAR2 VMA6 RPL6B RPS17A YML025C RPS18B RPL6A SEC59 ERG5 ASC1 RPL13B RPS16A RPL36A RRP5 RPS10B PEP5 RPL20A ZRC1 RPL16B YCK2 RAP1 RPS19B RPP2A RPS15 GPD2 RPS19A RPL25 RKI1 RPS7A UBP2 RPS10A RPL20B RPA43 RPA190 RPS12 RPS9A MOT1 RPS6A RPL5 RPL7B RPL1A TEF1 RPL11A PRE2 RPC40             129      2256

cytoplasm         2.18714e-14    RPL19B RPS8A RPS11B TKL2 TEF2 RPS6B RPS9B GPD1 RPS29B RPL31A RPL13A RPS16B RPP1B RPL41B RPL35B RPL41A RPL35A SSB1 KRS1 PRO1 ADE8 RPS17B RPS18A RPL27B RPL37B RPL12A RPL34A RPS24A RPS8B RPL23B CCA1 RPL30 RPL24A RPL28 RPS2 RPS26A RPS25A RPL26B RPL11B RPS23A TDH3 RPL14B RPL8A RPS27B RPS4B RPL2B RPL40A RPS21B RPL39 RPS22A RPS14B RPS5 RPL14A RPS27A RPL17A RPS21A RPL40B UBI4 PDC1 RPS0B RPL10 RPS25B RPS29A CAR2 RPL6B RPS17A RPS18B RPL6A ASC1 RPL13B RPS16A RPL36A RPS10B RPL20A RPL16B RPS19B RPP2A RPS15 RPS19A RPL25 RKI1 RPS7A UBP2 RPS10A RPL20B RPS12 RPS9A RPS6A RPL5 RPL7B RPL1A TEF1 RPL11A          93        554

 

 

 

MIPS Phenotypes

Category          p-value In Category from Cluster          k          f

 

 

 

MIPS Subcellular Localization

Category          p-value In Category from Cluster          k          f

cytoplasm         1.4877e-14      RPL19B RPS8A RPS11B TKL2 TEF2 RPS6B RPS9B SRO9 GPD1 RPS29B RPL31A RPL13A RPS16B RPP1B RPL41B RPL35B RPL41A RPL35A SSB1 KRS1 PRO1 ADE8 RPS17B RPS18A RPL27B RPL37B RPL12A RPL34A RPS24A RPS8B RPL23B CCA1 RPL30 RPL24A RPL28 RPS2 RPS26A RPS25A RPL26B RPL11B RPS23A TDH3 RPL14B RPL8A RPS27B RPS4B RPL2B RPL40A RPS21B RPL39 RPS22A RPS14B RPS5 RPL14A RPS27A RPL17A RPS21A RPL40B UBI4 PDC1 RPS0B RPL22A RPL10 RPS25B RPS29A CAR2 RPL6B RPS17A RPS18B RPL6A ASC1 RPL13B RPS16A RPL36A RPS10B RPL20A RPL16B RPS19B RPP2A RPS15 RPS19A RPL25 RKI1 RPS7A UBP2 RPS10A RPL20B RPS12 RPS9A RPS6A RPL5 RPL7B RPL1A TEF1 RPL11A             95        593

 

 

 

MIPS Protein Complexes

Category          p-value In Category from Cluster          k          f

cytoplasmic ribosomal small subunit       1e-14   RPS8A RPS11B RPS6B RPS9B RPS29B RPS16B RPS17B RPS18A RPS24A RPS8B RPS2 RPS26A RPS25A RPS23A RPS27B RPS4B RPS21B RPS22A RPS14B RPS5 RPS27A RPS21A RPS0B RPS25B RPS29A RPS17A RPS18B ASC1 RPS16A RPS10B RPS19B RPS15 RPS19A RPS7A RPS10A RPS12 RPS9A RPS6A         38        57

Cytoplasmic ribosomes 1e-14   RPL19B RPS8A RPS11B RPS6B RPS9B RPS29B RPL31A RPL13A RPS16B RPP1B RPL41B RPL35B RPL41A RPL35A RPS17B RPS18A RPL27B RPL37B RPL12A RPL34A RPS24A RPS8B RPL23B RPL2A RPL30 RPL24A RPL28 RPS2 RPS26A RPS25A RPL26B RPL11B RPS23A RPL14B RPL8A RPS27B RPS4B RPL2B RPL40A RPS21B RPL39 RPS22A RPS14B RPS5 RPL14A RPS27A RPL17A RPS21A RPL40B RPS0B RPL22A RPL10 RPS25B RPS29A RPL6B RPS17A RPS18B RPL6A ASC1 RPL13B RPS16A RPL36A RPS10B RPL20A RPL16B RPS19B RPP2A RPS15 RPS19A RPL25 RPS7A RPS10A RPL20B RPS12 RPS9A RPS6A RPL5 RPL7B RPL1A RPL11A          80        138

cytoplasmic ribosomal large subunit       1e-14   RPL19B RPL31A RPL13A RPP1B RPL41B RPL35B RPL41A RPL35A RPL27B RPL37B RPL12A RPL34A RPL23B RPL2A RPL30 RPL24A RPL28 RPL26B RPL11B RPL14B RPL8A RPL2B RPL40A RPL39 RPL14A RPL17A RPL40B RPL22A RPL10 RPL6B RPL6A RPL13B RPL36A RPL20A RPL16B RPP2A RPL25 RPL20B RPL5 RPL7B RPL1A RPL11A     42        81

Translation complexes   1e-14   RPL19B RPS8A RPS11B TEF2 RPS6B RPS9B RPS29B RPL31A RPL13A RPS16B RPP1B RPL41B RPL35B RPL41A RPL35A RPS17B RPS18A RPL27B RPL37B RPL12A RPL34A RPS24A RPS8B RPL23B RPL2A RPL30 RPL24A RPL28 RPS2 RPS26A RPS25A RPL26B RPL11B RPS23A RPL14B RPL8A RPS27B RPS4B RPL2B RPL40A RPS21B RPL39 RPS22A RPS14B RPS5 RPL14A RPS27A RPL17A RPS21A RPL40B RPS0B RPL22A RPL10 RPS25B RPS29A RPL6B RPS17A RPS18B RPL6A ASC1 RPL13B RPS16A RPL36A RPS10B RPL20A RPL16B RPS19B RPP2A RPS15 RPS19A RPL25 RPS7A RPS10A RPL20B RPS12 RPS9A RPS6A RPL5 RPL7B RPL1A TEF1 RPL11A            82        240

 

 

 

MIPS Protein Classes

Category          p-value In Category from Cluster          k          f

 

 

 

GO Molecular Function

Category          p-value In Category from Cluster          k          f

structural constituent of ribosome [GO:0003735]          1e-14   RPL19B RPS8A RPS11B RPS6B RPS9B RPS29B RPL31A RPL13A RPS16B RPP1B RPL41B RPL35B RPL41A RPL35A RPS17B RPS18A RPL27B RPL37B RPL12A RPL34A RPS24A RPS8B RPL23B RPL2A RPL30 RPL24A RPL28 RPS2 RPS26A RPS25A RPL26B RPL11B RPS23A RPL14B RPL8A RPS27B RPS4B RPL2B RPL40A RPS21B RPL39 RPS22A RPS14B RPS5 RPL14A RPS27A RPL17A RPS21A RPL40B RPS0B RPL22A RPL10 RPS25B RPS29A RPL6B RPS17A YML025C RPS18B RPL6A RPL13B RPS16A RPL36A RPS10B RPL20A RPL16B RPS19B RPP2A RPS15 RPS19A RPL25 RPS7A RPS10A RPL20B RPS12 RPS9A RPS6A RPL5 RPL7B RPL1A RPL11A    80        206

structural molecule [GO:0005198]        1e-14   RPL19B RPS8A RPS11B RPS6B RPS9B RPS29B RPL31A RPL13A RPS16B RPP1B RPL41B RPL35B RPL41A RPL35A RPS17B RPS18A RPL27B RPL37B RPL12A RPL34A RPS24A RPS8B RPL23B RPL2A RPL30 RPL24A MPS2 RPL28 RPS2 RPS26A RPS25A RPL26B RPL11B RPS23A RPL14B RPL8A RPS27B RPS4B RPL2B RPL40A RPS21B RPL39 RPS22A RPS14B RPS5 RPL14A RPS27A RPL17A RPS21A RPL40B RPS0B RPL22A RPL10 RPS25B RPS29A CCW14 RPL6B RPS17A YML025C RPS18B RPL6A RPL13B RPS16A RPL36A RPS10B RPL20A RPL16B RPS19B RPP2A RPS15 RPS19A RPL25 RPS7A RPS10A RPL20B RPS12 RPS9A RPS6A RPL5 RPL7B RPL1A RPL11A       82        310

 

 

 

GO Biological Process

Category          p-value In Category from Cluster          k          f

protein biosynthesis [GO:0006412]       1e-14   RPL19B RPS8A RPS11B TEF2 RPS6B RPS9B SRO9 RPS29B RPL31A RPL13A RPS16B RPP1B RPL41B RPL35B RPL41A PPH22 RPL35A SSB1 KRS1 RPS17B RPS18A RPL27B RPL37B RPL12A RPL34A RPS24A RPS8B RPL23B CCA1 RPL2A RPL30 RPL24A RPL28 RPS2 RPS26A RPS25A RPL26B RPL11B RPS23A RPL14B RPL8A RPS27B RPS4B RPL2B RPL40A RPS21B RPL39 RPS22A RPS14B RPS5 RPL14A RPS27A RPL17A RPS21A RPL40B RPS0B RPL22A RPL10 RPS25B RPS29A RPL6B RPS17A YML025C RPS18B RPL6A SEC59 RPL13B RPS16A RPL36A RPS10B RPL20A RPL16B RPS19B RPP2A RPS15 RPS19A RPL25 RPS7A RPS10A RPL20B RPS12 RPS9A RPS6A RPL5 RPL7B RPL1A TEF1 RPL11A   88            415

macromolecule biosynthesis [GO:0009059]      1e-14   RPL19B SKT5 RPS8A RPS11B TEF2 RPS6B RPS9B SRO9 RPS29B RPL31A RPL13A RPS16B RPP1B RPL41B RPL35B RPL41A PPH22 RPL35A SSB1 KRS1 RPS17B RPS18A RPL27B RPL37B RPL12A RPL34A RPS24A RPS8B RPL23B CCA1 RPL2A RPL30 RPL24A RPL28 RPS2 RPS26A RPS25A RPL26B RPL11B RPS23A RPL14B RPL8A RPS27B RPS4B RPL2B RPL40A RPS21B RPL39 RPS22A RPS14B RPS5 RPL14A RPS27A RPL17A RPS21A RPL40B RPS0B RPL22A RPL10 RPS25B RPS29A RPL6B RPS17A YML025C RPS18B RPL6A SEC59 RPL13B RPS16A RPL36A RPS10B RPL20A RPL16B RPS19B RPP2A RPS15 RPS19A RPL25 RPS7A RPS10A RPL20B RPS12 RPS9A RPS6A RPL5 RPL7B RPL1A TEF1 RPL11A          89        422

biosynthesis [GO:0009058]      1e-14   RPL19B SKT5 RPS8A RPS11B TEF2 RPS6B RPS9B HIS4 SRO9 RPS29B RPL31A RPL13A RPS16B RPP1B RPL41B RPL35B RPL41A PPH22 RPL35A SSB1 KRS1 PRO1 ADE8 RPS17B RPS18A RPL27B RPL37B GCN4 RPL12A RPL34A RPS24A RPS8B RPL23B CCA1 RPL2A RPL30 RPL24A RPL28 RPS2 RPS26A RPS25A RPL26B RPL11B RPS23A TDH3 RPL14B RPL8A RPS27B RPS4B RPL2B RHR2 RPL40A SIP4 LCB3 RPS21B RPL39 RPS22A RPS14B RPS5 RPL14A RPS27A RPL17A RPS21A RPL40B RPS0B RPL22A RPL10 RPS25B RPS29A RPL6B RPS17A YML025C RPS18B RPL6A SEC59 ERG5 RPL13B RPS16A RPL36A RPS10B RPL20A RPL16B RPS19B RPP2A RPS15 RPS19A RPL25 RPS7A RPS10A RPL20B RPS12 RPS9A RPS6A RPL5 RPL7B RPL1A TEF1 RPL11A            98        731

protein metabolism [GO:0019538]        1e-14   PIM1 RPL19B AST1 RPS8A RPS11B TEF2 RPS6B RPS9B KCC4 SRO9 RPS29B RPL31A RPL13A RPS16B RPP1B RPL41B RPL35B RPL41A PPH22 RPL35A SSB1 KRS1 SIZ1 RPS17B ADA2 RPS18A RPL27B RPL37B GEA2 RPL12A RPL34A RPS24A RPS8B RPL23B CCA1 EPL1 RPL2A RPL30 RPL24A RPL28 VPS73 RPS2 MON1 RPS26A RPS25A RPL26B RPL11B RPS23A RPL14B RPL8A RPS27B RPS4B MNL1 RPL2B RPL40A MLP2 RPS21B RPL39 RPS22A RPS14B RPS5 SFT1 RPL14A RPS27A RPL17A RPS21A RPL40B MLP1 UBI4 RPS0B RPL22A RPL10 RPS25B RPS29A RPL6B RPS17A YML025C RPS18B RPL6A SEC59 RPL13B RPS16A RPL36A RPS10B PEP5 RPL20A RPL16B YCK2 RPS19B RPP2A RPS15 RPS19A RPL25 YGK3 NOB1 RPS7A UBP2 RPS10A RPL20B RPS12 RPS9A RPS6A RPL5 RPL7B RPL1A TEF1 RPL11A PRE2 COG4 DBF20 SGV1 111      1168

metabolism [GO:0008152]       8.09353e-14    POP5 PIM1 RPL19B SKT5 AST1 RPS8A RPS11B TKL2 TEF2 RPS6B NTC20 RPS9B KCC4 HIS4 SRO9 RPS29B RPL31A RPL13A RPS16B RPP1B RPL41B RPL35B RPL41A PPH22 RPL35A SSB1 KRS1 PRO1 CFT1 ADE8 SIZ1 RPS17B ADA2 UTP6 RPS18A RPL27B RPL37B GCN4 GEA2 RPL12A RPL34A RPS24A RPS8B SLX8 RPL23B CCA1 RPH1 EPL1 RPL2A RPL30 RPL24A GUP1 RPL28 VPS73 SNF4 RPS2 MON1 RPS26A RPS25A RPL26B RPL11B RPS23A TDH3 RPL14B RPL8A RPS27B RPS4B MNL1 RPL2B RHR2 RPL40A MLP2 SIP4 DPB11 LCB3 RPS21B RPL39 RPS22A RPS14B RPS5 HOM6 SFT1 RPL14A RPS27A RPL17A RPS21A RPL40B MLP1 UBI4 PDC1 RPS0B RPL22A RPL10 RPS25B RPS29A CAR2 RPL6B RPS17A YML025C RPS18B RPL6A SEC59 ERG5 RPL13B RPS16A RPL36A RRP5 RPS10B PEP5 RPL20A ZRC1 RPL16B YCK2 RAP1 RPS19B RPP2A RPS15 GPD2 RPS19A RPL25 YGK3 PFK27 NOB1 RKI1 RPS7A UBP2 RPS10A RPL20B RPA43 RPA190 RPS12 RPS9A MOT1 RPS6A RPL5 RPL7B RPL1A TEF1 RPL11A PRE2 COG4 RPC40 DBF20 SGV1             144      2693

cell growth and/or maintenance [GO:0008151] 8.94895e-12    POP5 PIM1 RPL19B SKT5 AST1 KTI11 RPS8A RPS11B TKL2 TEF2 FZO1 RPS6B NTC20 RPS9B KCC4 AGP1 HIS4 SRO9 GPD1 TSR1 RPS29B RPL31A RPL13A RPS16B RPP1B RPL41B RPL35B RPL41A PPH22 RPL35A SSB1 YDR036C KRS1 PMP3 PRO1 CFT1 SHE9 ADE8 SIZ1 RPS17B ADA2 UTP6 RPS18A UGO1 RPL27B RPL37B GCN4 GEA2 RPL12A RPL34A RPS24A RPS8B SLX8 RPL23B CCA1 RPH1 BUD27 EPL1 RPL2A RPL30 RPL24A HSF1 MPS2 GUP1 RPL28 VPS73 SNF4 RPS2 MON1 RPS26A RPS25A RPL26B RPL11B RPS23A TDH3 RPL14B RPL8A RPS27B ECM12 HXT5 RPS4B MNL1 RPL2B RHR2 RPL40A MLP2 SIP4 DPB11 LCB3 RPS21B RPL39 RPS22A RPS14B APS2 PTK2 RPS5 HOM6 SFT1 RPL14A RPS27A STE3 RPL17A RPS21A RPL40B MLP1 UBI4 PDC1 RPS0B RPL22A BUD20 RPL10 CTS1 RPS25B RPS29A CCW14 CAR2 VMA6 RPL6B RPS17A YML025C RPS18B RPL6A SEC59 BUD22 ERG5 RPL13B RPS16A RPL36A RRP5 RPS10B PEP5 RPL20A ZRC1 RPL16B YCK2 RAP1 RPS19B RPP2A RPS15 GPD2 MAM3 RPS19A RPL25 YGK3 PFK27 WHI2 NOB1 SGT1 RKI1 RPS7A UBP2 RPS10A RPL20B RPA43 RPA190 RPS12 RPS9A MOT1 RPS6A RPL5 RPL7B RPL1A TEF1 RPL11A PRE2 COG4 RPC40 DBF20 SGV1 169      3657

ribosomal subunit assembly [GO:0042257]       2.74514e-10    RPS11B RPS17B RPL12A RPL11B RPS14B RPS0B RPL10 RPL6B RPS17A YML025C RPL6A RPL25 RPL5 RPL11A 14        48

ribosome assembly [GO:0042255]       5.02846e-10    RPS11B RPS17B RPL12A RPL11B RPS14B RPS0B RPL10 RPL6B RPS17A YML025C RPL6A RPL25 RPL5 RPL11A 14        50

regulation of translational fidelity [GO:0006450]            8.20654e-07    RPS11B RPS9B RPS2 RPS23A RPS9A         5            7

ribosomal large subunit assembly and maintenance [GO:0000027]         1.54549e-06    RPL12A RPL11B RPL10 RPL6B YML025C RPL6A RPL25 RPL5 RPL11A     9          35

ribosome biogenesis and assembly [GO:0042254]        2.28047e-06    POP5 RPS11B TSR1 RPS17B UTP6 RPL12A RPL30 RPL11B RPS14B RPS0B RPL10 RPL6B RPS17A YML025C RPL6A RRP5 RPL25 RPL5 RPL11A          19            165

 

 

 

GO Cellular Component

Category          p-value In Category from Cluster          k          f

eukaryotic 48S initiation complex [GO:0016283]          1e-14   RPS8A RPS11B RPS6B RPS9B RPS29B RPS16B RPS17B RPS18A RPS24A RPS8B RPS2 RPS26A RPS25A RPS23A RPS27B RPS4B RPS21B RPS22A RPS14B RPS5 RPS27A RPS21A RPS0B RPS25B RPS29A RPS17A RPS18B RPS16A RPS10B RPS19B RPS15 RPS19A RPS7A RPS10A RPS12 RPS9A RPS6A        37        61

cytosolic small ribosomal subunit (sensu Eukarya) [GO:0005843]          1e-14   RPS8A RPS11B RPS6B RPS9B RPS29B RPS16B RPS17B RPS18A RPS24A RPS8B RPS2 RPS26A RPS25A RPS23A RPS27B RPS4B RPS21B RPS22A RPS14B RPS5 RPS27A RPS21A RPS0B RPS25B RPS29A RPS17A RPS18B RPS16A RPS10B RPS19B RPS15 RPS19A RPS7A RPS10A RPS12 RPS9A RPS6A     37        61

eukaryotic 43S pre-initiation complex [GO:0016282]    1e-14   RPS8A RPS11B RPS6B RPS9B RPS29B RPS16B RPS17B RPS18A RPS24A RPS8B RPS2 RPS26A RPS25A RPS23A RPS27B RPS4B RPS21B RPS22A RPS14B RPS5 RPS27A RPS21A RPS0B RPS25B RPS29A RPS17A RPS18B RPS16A RPS10B RPS19B RPS15 RPS19A RPS7A RPS10A RPS12 RPS9A RPS6A        37        67

cytosolic ribosome (sensu Eukarya) [GO:0005830]       1e-14   RPL19B RPS8A RPS11B RPS6B RPS9B RPS29B RPL31A RPL13A RPS16B RPP1B RPL41B RPL35B RPL41A RPL35A RPS17B RPS18A RPL27B RPL37B RPL12A RPL34A RPS24A RPS8B RPL23B RPL2A RPL30 RPL24A RPL28 RPS2 RPS26A RPS25A RPL26B RPL11B RPS23A RPL14B RPL8A RPS27B RPS4B RPL2B RPL40A RPS21B RPL39 RPS22A RPS14B RPS5 RPL14A RPS27A RPL17A RPS21A RPL40B RPS0B RPL22A RPL10 RPS25B RPS29A RPL6B RPS17A RPS18B RPL6A RPL13B RPS16A RPL36A RPS10B RPL20A RPL16B RPS19B RPP2A RPS15 RPS19A RPL25 RPS7A RPS10A RPL20B RPS12 RPS9A RPS6A RPL5 RPL7B RPL1A RPL11A       79        151

cytosolic large ribosomal subunit (sensu Eukarya) [GO:0005842]          1e-14   RPL19B RPL31A RPL13A RPP1B RPL41B RPL35B RPL41A RPL35A RPL27B RPL37B RPL12A RPL34A RPL23B RPL2A RPL30 RPL24A RPL28 RPL26B RPL11B RPL14B RPL8A RPL2B RPL40A RPL39 RPL14A RPL17A RPL40B RPL22A RPL10 RPL6B RPL6A RPL13B RPL36A RPL20A RPL16B RPP2A RPL25 RPL20B RPL5 RPL7B RPL1A RPL11A         42        83

small ribosomal subunit [GO:0015935] 1e-14   RPS8A RPS11B RPS6B RPS9B RPS29B RPS16B RPS17B RPS18A RPS24A RPS8B RPS2 RPS26A RPS25A RPS23A RPS27B RPS4B RPS21B RPS22A RPS14B RPS5 RPS27A RPS21A RPS0B RPS25B RPS29A RPS17A RPS18B RPS16A RPS10B RPS19B RPS15 RPS19A RPS7A RPS10A RPS12 RPS9A RPS6A            37        88

large ribosomal subunit [GO:0015934]  1e-14   RPL19B RPL31A RPL13A RPP1B RPL41B RPL35B RPL41A RPL35A RPL27B RPL37B RPL12A RPL34A RPL23B RPL2A RPL30 RPL24A RPL28 RPL26B RPL11B RPL14B RPL8A RPL2B RPL40A RPL39 RPL14A RPL17A RPL40B RPL22A RPL10 RPL6B YML025C RPL6A RPL13B RPL36A RPL20A RPL16B RPP2A RPL25 RPL20B RPL5 RPL7B RPL1A RPL11A   43        122

ribosome [GO:0005840]          1e-14   RPL19B RPS8A RPS11B TEF2 RPS6B RPS9B SRO9 RPS29B RPL31A RPL13A RPS16B RPP1B RPL41B RPL35B RPL41A RPL35A SSB1 RPS17B RPS18A RPL27B RPL37B RPL12A RPL34A RPS24A RPS8B RPL23B RPL2A RPL30 RPL24A RPL28 RPS2 RPS26A RPS25A RPL26B RPL11B RPS23A RPL14B RPL8A RPS27B RPS4B RPL2B RPL40A RPS21B RPL39 RPS22A RPS14B RPS5 RPL14A RPS27A RPL17A RPS21A RPL40B RPS0B RPL22A RPL10 RPS25B RPS29A RPL6B RPS17A YML025C RPS18B RPL6A RPL13B RPS16A RPL36A RPS10B RPL20A RPL16B RPS19B RPP2A RPS15 RPS19A RPL25 RPS7A RPS10A RPL20B RPS12 RPS9A RPS6A RPL5 RPL7B RPL1A TEF1 RPL11A       84        258

cytosol [GO:0005829] 1e-14   RPL19B RPS8A RPS11B RPS6B RPS9B RPS29B RPL31A RPL13A RPS16B RPP1B RPL41B RPL35B RPL41A RPL35A RPS17B RPS18A RPL27B RPL37B RPL12A RPL34A RPS24A RPS8B RPL23B RPL2A RPL30 RPL24A RPL28 RPS2 RPS26A RPS25A RPL26B RPL11B RPS23A TDH3 RPL14B RPL8A RPS27B RPS4B RPL2B RPL40A RPS21B RPL39 RPS22A RPS14B RPS5 RPL14A RPS27A RPL17A RPS21A RPL40B RPS0B RPL22A RPL10 RPS25B RPS29A RPL6B RPS17A RPS18B RPL6A RPL13B RPS16A RPL36A RPS10B RPL20A RPL16B RPS19B RPP2A RPS15 GPD2 RPS19A RPL25 NOB1 RPS7A RPS10A RPL20B RPS12 RPS9A RPS6A RPL5 RPL7B RPL1A RPL11A PRE2            83        310

ribonucleoprotein complex [GO:0030529]        1e-14   POP5 RPL19B RPS8A RPS11B TEF2 RPS6B NTC20 RPS9B SRO9 RPS29B RPL31A RPL13A RPS16B RPP1B RPL41B RPL35B RPL41A RPL35A SSB1 RPS17B UTP6 RPS18A RPL27B RPL37B RPL12A RPL34A RPS24A RPS8B RPL23B RPL2A RPL30 RPL24A RPL28 RPS2 RPS26A RPS25A RPL26B RPL11B RPS23A RPL14B RPL8A RPS27B RPS4B RPL2B RPL40A RPS21B RPL39 RPS22A RPS14B RPS5 RPL14A RPS27A RPL17A RPS21A RPL40B RPS0B RPL22A RPL10 RPS25B RPS29A RPL6B RPS17A YML025C RPS18B RPL6A RPL13B RPS16A RPL36A RRP5 RPS10B RPL20A RPL16B RPS19B RPP2A RPS15 RPS19A RPL25 RPS7A RPS10A RPL20B RPS12 RPS9A RPS6A RPL5 RPL7B RPL1A TEF1 RPL11A          88        380

cytoplasm [GO:0005737]         1e-14   PIM1 RPL19B SKT5 RPS8A RPS11B TEF2 FZO1 RPS6B RPS9B SRO9 GPD1 RPS29B RPL31A RPL13A RPS16B RPP1B RPL41B RPL35B RPL41A RPL35A SSB1 KRS1 SHE9 RPS17B RPS18A UGO1 RPL27B RPL37B GEA2 RPL12A RPL34A RPS24A AST2 RPS8B RPL23B CCA1 RPL2A RPL30 RPL24A MPS2 RPL28 SNF4 RPS2 RPS26A RPS25A RPL26B RPL11B RPS23A TDH3 RPL14B RPL8A RPS27B YHR033W RPS4B MNL1 RPL2B RPL40A LCB3 RPS21B RPL39 RPS22A RPS14B APS2 RPS5 SFT1 RPL14A RPS27A RPL17A RPS21A RPL40B UBI4 RPS0B RPL22A RPL10 CTS1 RPS25B RPS29A YLR437C CAR2 VMA6 RPL6B RPS17A YML025C RPS18B RPL6A ERG5 ASC1 RPL13B RPS16A RPL36A RPS10B PEP5 RPL20A ZRC1 RPL16B RPS19B RPP2A RPS15 GPD2 RPS19A RPL25 PFK27 NOB1 RPS7A UBP2 RPS10A RPL20B RPS12 RPS9A RPS6A RPL5 RPL7B RPL1A TEF1 RPL11A PRE2 COG4 117      1810

intracellular [GO:0005622]       9.29146e-13    POP5 PIM1 RPL19B SKT5 RPS8A RPS11B TEF2 FZO1 RPS6B NTC20 RPS9B AGP1 SRO9 GPD1 TSR1 RPS29B RPL31A RPL13A RPS16B RPP1B RPL41B RPL35B RPL41A RPL35A SSB1 KRS1 PMP3 CFT1 SHE9 SIZ1 RPS17B ADA2 UTP6 RPS18A UGO1 RPL27B RPL37B GCN4 GEA2 RPL12A RPL34A RPS24A AST2 RPS8B SLX8 RPL23B CCA1 RPH1 EPL1 RPL2A RPL30 RPL24A HSF1 MPS2 RPL28 SNF4 RPS2 RPS26A RPS25A RPL26B RPL11B RPS23A TDH3 RPL14B RPL8A RPS27B YHR033W HXT5 RPS4B MNL1 RPL2B RPL40A MLP2 SIP4 DPB11 LCB3 RPS21B RPL39 RPS22A RPS14B APS2 RPS5 SFT1 RPL14A RPS27A STE3 RPL17A RPS21A RPL40B MLP1 UBI4 RPS0B RPL22A BUD20 RPL10 CTS1 RPS25B RPS29A YLR437C CAR2 VMA6 RPL6B RPS17A YML025C RPS18B RPL6A BUD22 ERG5 ASC1 RPL13B RPS16A YMR144W RPL36A RRP5 RPS10B PEP5 RPL20A ZRC1 RPL16B YCK2 RAP1 RPS19B RPP2A RPS15 GPD2 RPS19A RPL25 PFK27 NOB1 SGT1 RPS7A UBP2 RPS10A RPL20B RPA43 RPA190 RPS12 RPS9A MOT1 RPS6A RPL5 RPL7B RPL1A TEF1 RPL11A PRE2 COG4 RPC40 SGV1    149      2921

cell [GO:0005623]       1.76958e-12    POP5 PIM1 RPL19B SKT5 AST1 RPS8A RPS11B TEF2 FZO1 RPS6B NTC20 RPS9B KCC4 AGP1 HIS4 SRO9 GPD1 TSR1 RPS29B RPL31A RPL13A RPS16B RPP1B RPL41B RPL35B RPL41A RPL35A SSB1 KRS1 PMP3 CFT1 SHE9 SIZ1 RPS17B ADA2 UTP6 RPS18A UGO1 RPL27B RPL37B GCN4 GEA2 RPL12A RPL34A RPS24A AST2 RPS8B SLX8 RPL23B CCA1 RPH1 EPL1 RPL2A RPL30 RPL24A HSF1 MPS2 GUP1 RPL28 SNF4 RPS2 RPS26A RPS25A RPL26B RPL11B RPS23A TDH3 RPL14B RPL8A RPS27B YHR033W HXT5 RPS4B MNL1 RPL2B RPL40A MLP2 SIP4 DPB11 LCB3 RPS21B RPL39 RPS22A RPS14B APS2 RPS5 SFT1 RPL14A RPS27A STE3 RPL17A RPS21A RPL40B MLP1 UBI4 RPS0B RPL22A BUD20 RPL10 CTS1 RPS25B RPS29A YLR437C CAR2 VMA6 RPL6B RPS17A YML025C RPS18B RPL6A SEC59 BUD22 ERG5 ASC1 RPL13B RPS16A YMR144W RPL36A RRP5 RPS10B PEP5 RPL20A ZRC1 RPL16B YCK2 RAP1 RPS19B RPP2A RPS15 GPD2 RPS19A RPL25 PFK27 NOB1 SGT1 RPS7A UBP2 RPS10A RPL20B RPA43 RPA190 RPS12 RPS9A MOT1 RPS6A RPL5 RPL7B RPL1A TEF1 RPL11A PRE2 COG4 RPC40 SGV1 154      3106

 

 

 

SMART Domains

Category          p-value In Category from Cluster          k          f

 

 

 

PFam-A Domains

Category          p-value In Category from Cluster          k          f

PF00467 (KOW)        2.69446e-05    RPL27B RPL26B RPL14B RPS4B RPL14A 5          12

 

 

 

Yeast Two Hybrid - Uetz

Category          p-value In Category from Cluster          k          f

 

 

 

Yeast Two Hybrid - Ito (core)

Category          p-value In Category from Cluster          k          f

 

 

 

Yeast Two Hybrid - Ito (full)

Category          p-value In Category from Cluster          k          f

 

 

 

Synthetic Genetic Array Analysis

Category          p-value In Category from Cluster          k          f

 

 

 

MDS Proteomics Complexes

Category          p-value In Category from Cluster          k          f

 

 

 

Cellzome Complexes

Category          p-value In Category from Cluster          k          f

YBR031W (RPL4A)   6.01519e-13    RPL13A RPL27B RPL28 RPL11B RPL2B RPS14B RPL17A RPL10 RPL6A RPL13B RPL20A RPL16B RPL25 RPL20B RPL7B 15        39

 

 

 

Proteome Localization--Observed

Category          p-value In Category from Cluster          k          f

cyto      4.58339e-05    FUN19 RPL19B YBL029C-A RPS8A TEF2 RPS6B AGP1 HIS4 GPD1 RPL31A RPL13A RPL41A PPH22 SSB1 KRS1 PRO1 RPS17B RPS18A YEL007W GEA2 ZRG8 YER034W AST2 RPL23B BUD27 RPL24A SNF4 RPS2 RPS26A RPL26B RPL11B YGR117C RPS23A TDH3 RPL8A YHR033W RHR2 YJL049W RPS22A RPS5 HOM6 SFT1 RPL14A RPS27A RPL17A UBI4 PDC1 RPL22A RPL10 YLR437C CAR2 ASC1 RPS16A YNL010W YNL011C RPL16B RPS15 MAM3 YOL109W RPL25 YGK3 PFK27 WHI2 RPS9A RPL5 RPL7B YPL199C TEF1 RPL11A       69        1324

 

 

 

Proteome Localization--Predicted+Observed

Category          p-value In Category from Cluster          k          f

cyt        1.0468e-08      FUN19 RPL19B YBL029W YBL060W SKT5 AST1 RPS8A RPS11B TKL2 TEF2 FZO1 DTR1 RPS6B RPS9B AGP1 HIS4 SRO9 GPD1 TSR1 RPS29B RPL31A RXT3 RPL13A RPS16B RPP1B YDL133W RPL35B RPL41A YDL186W PPH22 RPL35A SSB1 KRS1 PMP3 PRO1 ADE8 RPS17B UTP6 RPS18A UGO1 RPL27B RPL37B YEL007W GEA2 YEL023C RPL12A ZRG8 YER034W RPS24A AST2 RPS8B SLX8 RPL23B BUD27 RPL30 RPL24A RPL28 RPS2 MON1 RPS26A RPS25A YGR033C RPL26B RPL11B YGR117C RPS23A TDH3 RPL14B RPL8A RPS27B YHR033W HXT5 YHR122W RPS4B MNL1 RPL2B RHR2 YIL055C RPL40A YJL049W SIP4 RPS21B RPL39 RPS22A RPS14B RPS5 HOM6 RPL14A RPS27A RPL17A RPS21A RPL40B UBI4 PDC1 RPS0B RPL22A RPL10 RPS25B YLR387C RPS29A YLR437C CAR2 VMA6 RPL6B RPS17A RPS18B RPL6A ASC1 RPL13B RPS16A RPL36A RPS10B PEP5 RPL20A YNL010W YNL011C RPL16B YNL101W YCK2 RPS19B RPP2A RPS15 YOL109W RPS19A RPL25 YGK3 PFK27 WHI2 SGT1 RKI1 RPS7A UBP2 YOR292C RPS10A RPL20B SCP1 RPS12 RPS9A RPS6A RPL5 RPL7B YPL199C RPL1A TEF1 RPL11A PRE2 COG4 DBF20             148      3210

 

 

 

Deletions Consortium (Essentiality, Morphology)

Category          p-value In Category from Cluster          k          f

 

 

 

Yeast Fitness Data

Category          p-value In Category from Cluster          k          f

Slow Growers  5.43024e-06    RPL19B RPS11B FZO1 RPS6B RPS9B RPS29B RPL31A RPL35A PMP3 PRO1 RPS18A RPL34A RPS24A SLX8 RPL23B BUD27 GUP1 SNF4 RPS23A RPS27B RPS4B RPS21B RPL39 RPL14A PDC1 YLR047C RPL22A BUD20 VMA6 RPL6B RPS17A RPL6A BUD22 ASC1 RPL13B RPS16A RPL16B RPS19B RPS19A RPS7A RPS10A RPS6A    42        617

 

 

 

Published Complexes

Category          p-value In Category from Cluster          k          f

Andersen et al. (2002) - Curr Bio 12:1-            8.8276e-10      RPS6B RPS9B RPL31A RPL27B RPS8B RPL28 RPL26B RPL11B RPL14B RPL2B RPS5 RPL17A UBI4 RPL22A RPL6B RPS18B RPL13B RPS16A RRP5 RPL25 RPA190 RPS12 RPL5 RPC40            24        165

Harnicharnpai et al. (2001) - Mol Cell 8:505-   0.000110009   SSB1 RPS2 TDH3 RPS22A RPL10 RPS15 RPL5      7            34

 

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Rap1-PBMandLiebChIP-exact.FunSpec.txt

 Input Cluster (n=17)

YBR188C        NTC20

YBR189W       RPS9B

YCL030C        HIS4

YDL136W       RPL35B

YDR500C       RPL37B

YDR501W      PLM2

YGL030W       RPL30

YGL031C        RPL24A

YKR057W      RPS21A

YMR013W-A

YMR014W      BUD22

YMR116C       ASC1

YNL216W      RAP1

YOL059W      GPD2

YOL060C       MAM3

YOR124C       UBP2

YPR080W       TEF1

 

Genes Not Found:

 

SNR72

SNR73

SNR74

SNR75

MIPS Functional Classification

Category          p-value In Category from Cluster          k          f

PROTEIN SYNTHESIS          9.71661e-08    RPS9B RPL35B RPL37B RPL30 RPL24A RPS21A ASC1 RAP1 TEF1             9          359

ribosome biogenesis      7.36533e-07    RPS9B RPL35B RPL37B RPL30 RPL24A RPS21A ASC1   7          215

cytoplasm         3.93681e-06    RPS9B RPL35B RPL37B RPL30 RPL24A RPS21A ASC1 UBP2 TEF1       9          554

 

 

 

MIPS Phenotypes

Category          p-value In Category from Cluster          k          f

 

 

 

MIPS Subcellular Localization

Category          p-value In Category from Cluster          k          f

cytoplasm         6.94789e-06    RPS9B RPL35B RPL37B RPL30 RPL24A RPS21A ASC1 UBP2 TEF1       9          593

 

 

 

MIPS Protein Complexes

Category          p-value In Category from Cluster          k          f

Cytoplasmic ribosomes 3.4891e-08      RPS9B RPL35B RPL37B RPL30 RPL24A RPS21A ASC1   7          138

Translation complexes   7.4291e-08      RPS9B RPL35B RPL37B RPL30 RPL24A RPS21A ASC1 TEF1      8          240

cytoplasmic ribosomal large subunit       5.42428e-05    RPL35B RPL37B RPL30 RPL24A     4          81

 

 

 

MIPS Protein Classes

Category          p-value In Category from Cluster          k          f

 

 

 

GO Molecular Function

Category          p-value In Category from Cluster          k          f

structural constituent of ribosome [GO:0003735]          1.07211e-05    RPS9B RPL35B RPL37B RPL30 RPL24A RPS21A          6          206

 

 

 

GO Biological Process

Category          p-value In Category from Cluster          k          f

 

 

 

GO Cellular Component

Category          p-value In Category from Cluster          k          f

cytosolic ribosome (sensu Eukarya) [GO:0005830]       1.76117e-06    RPS9B RPL35B RPL37B RPL30 RPL24A RPS21A          6          151

ribosome [GO:0005840]          2.5224e-06      RPS9B RPL35B RPL37B RPL30 RPL24A RPS21A TEF1    7          258

ribonucleoprotein complex [GO:0030529]        2.54478e-06    NTC20 RPS9B RPL35B RPL37B RPL30 RPL24A RPS21A TEF1             8          380

cytosol [GO:0005829] 8.57775e-06    RPS9B RPL35B RPL37B RPL30 RPL24A RPS21A GPD2   7          310

cytosolic large ribosomal subunit (sensu Eukarya) [GO:0005842]          5.9712e-05      RPL35B RPL37B RPL30 RPL24A             4          83

 

 

 

SMART Domains

Category          p-value In Category from Cluster          k          f

 

 

 

PFam-A Domains

Category          p-value In Category from Cluster          k          f

 

 

 

Yeast Two Hybrid - Uetz

Category          p-value In Category from Cluster          k          f

 

 

 

Yeast Two Hybrid - Ito (core)

Category          p-value In Category from Cluster          k          f

 

 

 

Yeast Two Hybrid - Ito (full)

Category          p-value In Category from Cluster          k          f

 

 

 

Synthetic Genetic Array Analysis

Category          p-value In Category from Cluster          k          f

 

 

 

MDS Proteomics Complexes

Category          p-value In Category from Cluster          k          f

 

 

 

Cellzome Complexes

Category          p-value In Category from Cluster          k          f

 

 

 

Proteome Localization--Observed

Category          p-value In Category from Cluster          k          f

 

 

 

Proteome Localization--Predicted+Observed

Category          p-value In Category from Cluster          k          f

 

 

 

Deletions Consortium (Essentiality, Morphology)

Category          p-value In Category from Cluster          k          f

 

 

 

Yeast Fitness Data

Category          p-value In Category from Cluster          k          f

 

 

 

Published Complexes

Category          p-value In Category from Cluster          k          f

 

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Rap1-PBMandnotLiebChIP-alldata.FunSpec.txt

Input Cluster (n=126)

YBL049W

YBR052C

YBR060C        ORC2

YBR149W       ARA1

YBR196C        PGI1

YBR204C

YBR205W       KTR3

YBR295W       PCA1

YCR011C       ADP1

YCR012W      PGK1

YDL235C        YPD1

YDR050C       TPI1

YDR070C

YDR079C-A

YDR080W      VPS41

YDR109C

YDR110W      FOB1

YDR119W

YDR249C

YDR251W      PAM1

YDR258C       HSP78

YDR264C       AKR1

YDR265W      PEX10

YDR275W

YDR418W      RPL12B

YEL020W-A   TIM9

YER047C        SAP1

YER066W

YER158C

YFR032C

YFR032C-A    RPL29

YGL045W

YGL147C        RPL9A

YGR032W      GSC2

YGR052W

YGR233C       PHO81

YGR234W      YHB1

YHL036W       MUP3

YHL038C        CBP2

YHR141C       RPL42B

YHR142W      CHS7

YHR193C       EGD2

YHR194W      MDM31

YIL001W

YIL002C         INP51

YJL062W        LAS21

YJL062W-A

YJL063C         MRPL8

YJL076W        NET1

YJL077C         ICS3

YJL091C

YJL148W        RPA34

YJR073C         OPI3

YJR074W        MOG1

YJR083C

YJR084W        CSN12

YKL009W      MRT4

YKL010C       UFD4

YKL015W      PUT3

YKL016C       ATP7

YKL019W      RAM2

YKL020C       SPT23

YKL033W

YKL081W      TEF4

YKL082C

YKL096W      CWP1

YKL150W      MCR1

YKL151C

YKL182W      FAS1

YLL051C        FRE6

YLR003C

YLR004C

YLR005W       SSL1

YLR023C

YLR208W       SEC13

YLR213C        CRR1

YLR214W       FRE1

YLR249W       YEF3

YLR312C

YLR312W-A   MRPL15

YLR325C        RPL38

YLR326W

YLR399C        BDF1

YLR406C        RPL31B

YLR407W

YLR413W

YLR452C        SST2

YML010W      SPT5

YML011C

YMR026C       PEX12

YMR027W      HRT2

YMR087W

YMR092C       AIP1

YMR093W      UTP15

YMR095C       SNO1

YMR096W      SNZ1

YMR127C       SAS2

YMR128W      ECM16

YMR205C       PFK2

YMR206W

YMR251W

YNL142W      MEP2

YNL144C

YNL186W      UBP10

YNR069C

YNR070W      PDR18

YOL052C-A   DDR2

YOL103W      ITR2

YOL120C       RPL18A

YOR032C       HMS1

YOR093C

YOR094W      ARF3

YOR103C       OST2

YOR104W      PIN2

YOR113W      AZF1

YOR267C       HRK1

YOR269W      PAC1

YOR338W

YPL036W       PMA2

YPL037C        EGD1

YPL054W       LEE1

YPL055C        LGE1

YPL075W       GCR1

YPL229W

YPR057W       BRR1

YPR135W       CTF4

 

Genes Not Found:

 

SNR128

SNR190

SNR38

TL%28UAA%29K

TS%28UGA%29E

YBR196C-A

YBR196C-B

YFR032C-B

YLR406C-A

YLR412C-A

YOR032W-A

MIPS Functional Classification

Category          p-value In Category from Cluster          k          f

 

 

 

MIPS Phenotypes

Category          p-value In Category from Cluster          k          f

 

 

 

MIPS Subcellular Localization

Category          p-value In Category from Cluster          k          f

 

 

 

MIPS Protein Complexes

Category          p-value In Category from Cluster          k          f

 

 

 

MIPS Protein Classes

Category          p-value In Category from Cluster          k          f

 

 

 

GO Molecular Function

Category          p-value In Category from Cluster          k          f

 

 

 

GO Biological Process

Category          p-value In Category from Cluster          k          f

 

 

 

GO Cellular Component

Category          p-value In Category from Cluster          k          f

 

 

 

SMART Domains

Category          p-value In Category from Cluster          k          f

 

 

 

PFam-A Domains

Category          p-value In Category from Cluster          k          f

 

 

 

Yeast Two Hybrid - Uetz

Category          p-value In Category from Cluster          k          f

 

 

 

Yeast Two Hybrid - Ito (core)

Category          p-value In Category from Cluster          k          f

 

 

 

Yeast Two Hybrid - Ito (full)

Category          p-value In Category from Cluster          k          f

 

 

 

Synthetic Genetic Array Analysis

Category          p-value In Category from Cluster          k          f

 

 

 

MDS Proteomics Complexes

Category          p-value In Category from Cluster          k          f

 

 

 

Cellzome Complexes

Category          p-value In Category from Cluster          k          f

 

 

 

Proteome Localization--Observed

Category          p-value In Category from Cluster          k          f

 

 

 

Proteome Localization--Predicted+Observed

Category          p-value In Category from Cluster          k          f

 

 

 

Deletions Consortium (Essentiality, Morphology)

Category          p-value In Category from Cluster          k          f

 

 

 

Yeast Fitness Data

Category          p-value In Category from Cluster          k          f

 

 

 

Published Complexes

Category          p-value In Category from Cluster          k          f

 

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Rap1-PBMandnotLiebChIP-2SD.FunSpec.txt

Input Cluster (n=54)

YBL049W

YBR060C        ORC2

YDR070C

YDR109C

YDR110W      FOB1

YDR249C

YDR251W      PAM1

YDR418W      RPL12B

YER047C        SAP1

YGL147C        RPL9A

YGR233C       PHO81

YGR234W      YHB1

YHL036W       MUP3

YHL038C        CBP2

YHR141C       RPL42B

YHR142W      CHS7

YIL001W

YIL002C         INP51

YJR073C         OPI3

YJR074W        MOG1

YKL015W      PUT3

YKL016C       ATP7

YKL081W      TEF4

YKL082C

YKL150W      MCR1

YKL151C

YKL182W      FAS1

YLR003C

YLR004C

YLR005W       SSL1

YLR023C

YLR208W       SEC13

YLR249W       YEF3

YLR325C        RPL38

YLR326W

YLR399C        BDF1

YLR406C        RPL31B

YLR407W

YLR413W

YLR452C        SST2

YMR026C       PEX12

YMR027W      HRT2

YMR092C       AIP1

YMR093W      UTP15

YMR205C       PFK2

YMR206W

YNL186W      UBP10

YOR032C       HMS1

YOR103C       OST2

YOR104W      PIN2

YOR113W      AZF1

YOR338W

YPL075W       GCR1

YPR057W       BRR1

 

Genes Not Found:

 

SNR38

YLR406C-A

YLR412C-A

YOR032W-A

MIPS Functional Classification

Category          p-value In Category from Cluster          k          f

 

 

 

MIPS Phenotypes

Category          p-value In Category from Cluster          k          f

 

 

 

MIPS Subcellular Localization

Category          p-value In Category from Cluster          k          f

 

 

 

MIPS Protein Complexes

Category          p-value In Category from Cluster          k          f

 

 

 

MIPS Protein Classes

Category          p-value In Category from Cluster          k          f

 

 

 

GO Molecular Function

Category          p-value In Category from Cluster          k          f

 

 

 

GO Biological Process

Category          p-value In Category from Cluster          k          f

 

 

 

GO Cellular Component

Category          p-value In Category from Cluster          k          f

 

 

 

SMART Domains

Category          p-value In Category from Cluster          k          f

 

 

 

PFam-A Domains

Category          p-value In Category from Cluster          k          f

 

 

 

Yeast Two Hybrid - Uetz

Category          p-value In Category from Cluster          k          f

 

 

 

Yeast Two Hybrid - Ito (core)

Category          p-value In Category from Cluster          k          f

 

 

 

Yeast Two Hybrid - Ito (full)

Category          p-value In Category from Cluster          k          f

 

 

 

Synthetic Genetic Array Analysis

Category          p-value In Category from Cluster          k          f

 

 

 

MDS Proteomics Complexes

Category          p-value In Category from Cluster          k          f

 

 

 

Cellzome Complexes

Category          p-value In Category from Cluster          k          f

 

 

 

Proteome Localization--Observed

Category          p-value In Category from Cluster          k          f

 

 

 

Proteome Localization--Predicted+Observed

Category          p-value In Category from Cluster          k          f

 

 

 

Deletions Consortium (Essentiality, Morphology)

Category          p-value In Category from Cluster          k          f

 

 

 

Yeast Fitness Data

Category          p-value In Category from Cluster          k          f

 

 

 

Published Complexes

Category          p-value In Category from Cluster          k          f

 

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Rap1-PBMandnotLiebChIP-exact.FunSpec.txt

 Input Cluster (n=6)

YBL049W

YER047C        SAP1

YJR073C         OPI3

YJR074W        MOG1

YOR032C       HMS1

YOR338W

 

Genes Not Found:

 

 

YOR032W-A

MIPS Functional Classification

Category          p-value In Category from Cluster          k          f

 

 

 

MIPS Phenotypes

Category          p-value In Category from Cluster          k          f

 

 

 

MIPS Subcellular Localization

Category          p-value In Category from Cluster          k          f

 

 

 

MIPS Protein Complexes

Category          p-value In Category from Cluster          k          f

 

 

 

MIPS Protein Classes

Category          p-value In Category from Cluster          k          f

 

 

 

GO Molecular Function

Category          p-value In Category from Cluster          k          f

 

 

 

GO Biological Process

Category          p-value In Category from Cluster          k          f

 

 

 

GO Cellular Component

Category          p-value In Category from Cluster          k          f

 

 

 

SMART Domains

Category          p-value In Category from Cluster          k          f

 

 

 

PFam-A Domains

Category          p-value In Category from Cluster          k          f

 

 

 

Yeast Two Hybrid - Uetz

Category          p-value In Category from Cluster          k          f

 

 

 

Yeast Two Hybrid - Ito (core)

Category          p-value In Category from Cluster          k          f

 

 

 

Yeast Two Hybrid - Ito (full)

Category          p-value In Category from Cluster          k          f

 

 

 

Synthetic Genetic Array Analysis

Category          p-value In Category from Cluster          k          f

 

 

 

MDS Proteomics Complexes

Category          p-value In Category from Cluster          k          f

 

 

 

Cellzome Complexes

Category          p-value In Category from Cluster          k          f

 

 

 

Proteome Localization--Observed

Category          p-value In Category from Cluster          k          f

 

 

 

Proteome Localization--Predicted+Observed

Category          p-value In Category from Cluster          k          f

 

 

 

Deletions Consortium (Essentiality, Morphology)

Category          p-value In Category from Cluster          k          f

 

 

 

Yeast Fitness Data

Category          p-value In Category from Cluster          k          f

 

 

 

Published Complexes

Category          p-value In Category from Cluster          k          f

 

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Rap1-LiebChIPandnotPBM-alldata.FunSpec.txt

Input Cluster (n=6)

YBL049W

YER047C        SAP1

YJR073C         OPI3

YJR074W        MOG1

YOR032C       HMS1

YOR338W

 

Genes Not Found:

 

 

YOR032W-A

MIPS Functional Classification

Category          p-value In Category from Cluster          k          f

 

 

 

MIPS Phenotypes

Category          p-value In Category from Cluster          k          f

 

 

 

MIPS Subcellular Localization

Category          p-value In Category from Cluster          k          f

 

 

 

MIPS Protein Complexes

Category          p-value In Category from Cluster          k          f

 

 

 

MIPS Protein Classes

Category          p-value In Category from Cluster          k          f

 

 

 

GO Molecular Function

Category          p-value In Category from Cluster          k          f

 

 

 

GO Biological Process

Category          p-value In Category from Cluster          k          f

 

 

 

GO Cellular Component

Category          p-value In Category from Cluster          k          f

 

 

 

SMART Domains

Category          p-value In Category from Cluster          k          f

 

 

 

PFam-A Domains

Category          p-value In Category from Cluster          k          f

 

 

 

Yeast Two Hybrid - Uetz

Category          p-value In Category from Cluster          k          f

 

 

 

Yeast Two Hybrid - Ito (core)

Category          p-value In Category from Cluster          k          f

 

 

 

Yeast Two Hybrid - Ito (full)

Category          p-value In Category from Cluster          k          f

 

 

 

Synthetic Genetic Array Analysis

Category          p-value In Category from Cluster          k          f

 

 

 

MDS Proteomics Complexes

Category          p-value In Category from Cluster          k          f

 

 

 

Cellzome Complexes

Category          p-value In Category from Cluster          k          f

 

 

 

Proteome Localization--Observed

Category          p-value In Category from Cluster          k          f

 

 

 

Proteome Localization--Predicted+Observed

Category          p-value In Category from Cluster          k          f

 

 

 

Deletions Consortium (Essentiality, Morphology)

Category          p-value In Category from Cluster          k          f

 

 

 

Yeast Fitness Data

Category          p-value In Category from Cluster          k          f

 

 

 

Published Complexes

Category          p-value In Category from Cluster          k          f

 

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Rap1-LiebChIPandnotPBM-2SD.FunSpec.txt

 

Input Cluster (n=34)

YBL081W

YBL082C        RHK1

YBL092W       RPL32

YBL093C        ROX3

YDR042C

YEL056W       HAT2

YEL057C

YFR017C

YGL076C        RPL7A

YGR159C       NSR1

YGR258C       RAD2

YGR260W      TNA1

YHL015W       RPS20

YHL016C        DUR3

YJL133W        MRS3

YJL177W        RPL17B

YJL178C

YMR099C

YMR100W      MUB1

YNL162W      RPL42A

YNL162W-A

YNL163C       RIA1

YNL178W      RPS3

YNL180C       RHO5

YNL190W

YOR100C       CRC1

YOR101W      RAS1

YOR344C       TYE7

YPL144W

YPL145C        KES1

YPL189W       GUP2

YPL190C        NAB3

YPL226W       NEW1

YPL227C        ALG5

 

Genes Not Found:

 

SNR39B

SNR47

TP%28UGG%29O3

YHL015W-A

YJL133C-A

YPL189C-A

MIPS Functional Classification

Category          p-value In Category from Cluster          k          f

 

 

 

MIPS Phenotypes

Category          p-value In Category from Cluster          k          f

 

 

 

MIPS Subcellular Localization

Category          p-value In Category from Cluster          k          f

 

 

 

MIPS Protein Complexes

Category          p-value In Category from Cluster          k          f

Cytoplasmic ribosomes 8.27604e-05    RPL32 RPL7A RPS20 RPL17B RPL42A RPS3         6          138

 

 

 

MIPS Protein Classes

Category          p-value In Category from Cluster          k          f

 

 

 

GO Molecular Function

Category          p-value In Category from Cluster          k          f

 

 

 

GO Biological Process

Category          p-value In Category from Cluster          k          f

 

 

 

GO Cellular Component

Category          p-value In Category from Cluster          k          f

cytosolic ribosome (sensu Eukarya) [GO:0005830]       0.000136375   RPL32 RPL7A RPS20 RPL17B RPL42A RPS3             6          151

 

 

 

SMART Domains

Category          p-value In Category from Cluster          k          f

 

 

 

PFam-A Domains

Category          p-value In Category from Cluster          k          f

 

 

 

Yeast Two Hybrid - Uetz

Category          p-value In Category from Cluster          k          f

 

 

 

Yeast Two Hybrid - Ito (core)

Category          p-value In Category from Cluster          k          f

 

 

 

Yeast Two Hybrid - Ito (full)

Category          p-value In Category from Cluster          k          f

 

 

 

Synthetic Genetic Array Analysis

Category          p-value In Category from Cluster          k          f

 

 

 

MDS Proteomics Complexes

Category          p-value In Category from Cluster          k          f

 

 

 

Cellzome Complexes

Category          p-value In Category from Cluster          k          f

 

 

 

Proteome Localization--Observed

Category          p-value In Category from Cluster          k          f

 

 

 

Proteome Localization--Predicted+Observed

Category          p-value In Category from Cluster          k          f

 

 

 

Deletions Consortium (Essentiality, Morphology)

Category          p-value In Category from Cluster          k          f

 

 

 

Yeast Fitness Data

Category          p-value In Category from Cluster          k          f

 

 

 

Published Complexes

Category          p-value In Category from Cluster          k          f


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Rap1-LiebChIPandnotPBM-exact.FunSpec.txt

 Input Cluster (n=4)

YGR258C       RAD2

YGR260W      TNA1

YPL144W

YPL145C        KES1

 

Genes Not Found:

 

MIPS Functional Classification

Category          p-value In Category from Cluster          k          f

 

 

 

MIPS Phenotypes

Category          p-value In Category from Cluster          k          f

 

 

 

MIPS Subcellular Localization

Category          p-value In Category from Cluster          k          f

 

 

 

MIPS Protein Complexes

Category          p-value In Category from Cluster          k          f

 

 

 

MIPS Protein Classes

Category          p-value In Category from Cluster          k          f

 

 

 

GO Molecular Function

Category          p-value In Category from Cluster          k          f

 

 

 

GO Biological Process

Category          p-value In Category from Cluster          k          f

 

 

 

GO Cellular Component

Category          p-value In Category from Cluster          k          f

 

 

 

SMART Domains

Category          p-value In Category from Cluster          k          f

 

 

 

PFam-A Domains

Category          p-value In Category from Cluster          k          f

 

 

 

Yeast Two Hybrid - Uetz

Category          p-value In Category from Cluster          k          f

 

 

 

Yeast Two Hybrid - Ito (core)

Category          p-value In Category from Cluster          k          f

 

 

 

Yeast Two Hybrid - Ito (full)

Category          p-value In Category from Cluster          k          f

 

 

 

Synthetic Genetic Array Analysis

Category          p-value In Category from Cluster          k          f

 

 

 

MDS Proteomics Complexes

Category          p-value In Category from Cluster          k          f

 

 

 

Cellzome Complexes

Category          p-value In Category from Cluster          k          f

 

 

 

Proteome Localization--Observed

Category          p-value In Category from Cluster          k          f

 

 

 

Proteome Localization--Predicted+Observed

Category          p-value In Category from Cluster          k          f

 

 

 

Deletions Consortium (Essentiality, Morphology)

Category          p-value In Category from Cluster          k          f

 

 

 

Yeast Fitness Data

Category          p-value In Category from Cluster          k          f

 

 

 

Published Complexes

Category          p-value In Category from Cluster          k          f


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Rap1-LeeORLiebChIP-alldata.FunSpec.txt

 Input Cluster (n=434)

YAL033W       POP5

YAL034C        FUN19

YAL038W       CDC19

YAL039C        CYC3

YAL051W       OAF1

YBL020W       RFT1

YBL021C        HAP3

YBL022C        PIM1

YBL027W       RPL19B

YBL028C

YBL029C-A

YBL029W

YBL060W

YBL061C        SKT5

YBL069W       AST1

YBL071W-A   KTI11

YBL072C        RPS8A

YBL074C        AAR2

YBL081W

YBL082C        RHK1

YBL087C        RPL23A

YBL092W       RPL32

YBL093C        ROX3

YBL108C-A

YBL111C

YBR046C        ZTA1

YBR047W

YBR048W       RPS11B

YBR084C-A   RPL19A

YBR085W       AAC3

YBR117C        TKL2

YBR118W       TEF2

YBR179C        FZO1

YBR180W       DTR1

YBR181C        RPS6B

YBR188C        NTC20

YBR189W       RPS9B

YBR191W       RPL21A

YCL024W       KCC4

YCL025C        AGP1

YCL030C        HIS4

YCL036W       GFD2

YCL037C        SRO9

YCR024C-A   PMP1

YCR031C       RPS14A

YCR095C

YCR096C       HMRA2

YCR097W      HMRA1

YDL021W       GPM2

YDL022W       GPD1

YDL035C        GPR1

YDL055C        PSA1

YDL060W       TSR1

YDL061C        RPS29B

YDL075W       RPL31A

YDL076C        RXT3

YDL082W       RPL13A

YDL083C        RPS16B

YDL130W       RPP1B

YDL130W-A  STF1

YDL133C-A   RPL41B

YDL133W

YDL136W       RPL35B

YDL168W       SFA1

YDL169C        UGX2

YDL184C        RPL41A

YDL186W

YDL188C        PPH22

YDL191W       RPL35A

YDL229W       SSB1

YDR025W      RPS11A

YDR036C

YDR037W      KRS1

YDR040C       ENA1

YDR041W      RSM10

YDR042C

YDR063W

YDR064W      RPS13

YDR100W

YDR186C

YDR188W      CCT6

YDR276C       PMP3

YDR300C       PRO1

YDR301W      CFT1

YDR312W      SSF2

YDR324C       UTP4

YDR325W      YCG1

YDR393W      SHE9

YDR408C       ADE8

YDR409W      SIZ1

YDR418W      RPL12B

YDR447C       RPS17B

YDR448W      ADA2

YDR449C       UTP6

YDR450W      RPS18A

YDR470C       UGO1

YDR471W      RPL27B

YDR500C       RPL37B

YDR501W      PLM2

YDR541C

YDR542W

YDR545W      YRF1-1

YEL007W

YEL009C        GCN4

YEL022W       GEA2

YEL023C

YEL034W       HYP2

YEL035C        UTR5

YEL036C        ANP1

YEL054C        RPL12A

YEL056W       HAT2

YEL057C

YEL072W       RMD6

YEL073C

YEL075C

YER031C        YPT31

YER032W       FIR1

YER033C        ZRG8

YER034W

YER045C        ACA1

YER046W       SPO73

YER056C-A    RPL34A

YER074W       RPS24A

YER101C        AST2

YER102W       RPS8B

YER116C        SLX8

YER117W       RPL23B

YER130C

YER131W       RPS26B

YER168C        CCA1

YER169W       RPH1

YER189W

YER190W       YRF1-2

YFL014W       HSP12

YFL016C        MDJ1

YFL021W       GAT1

YFL022C        FRS2

YFL023W       BUD27

YFL024C        EPL1

YFL034C-A    RPL22B

YFL034W

YFL051C

YFR017C

YFR031C-A    RPL2A

YGL030W       RPL30

YGL031C        RPL24A

YGL071W       RCS1

YGL073W       HSF1

YGL075C        MPS2

YGL076C        RPL7A

YGL083W       SCY1

YGL084C        GUP1

YGL103W       RPL28

YGL104C        VPS73

YGL115W       SNF4

YGL123W       RPS2

YGL124C        MON1

YGL135W       RPL1B

YGL136C        MRM2

YGL141W       HUL5

YGL142C        GPI10

YGL189C        RPS26A

YGL258W       VEL1

YGL258W-A

YGL263W       COS12

YGR027C       RPS25A

YGR033C

YGR034W      RPL26B

YGR084C       MRP13

YGR085C       RPL11B

YGR117C

YGR118W      RPS23A

YGR148C       RPL24B

YGR149W

YGR159C       NSR1

YGR180C       RNR4

YGR192C       TDH3

YGR213C       RTA1

YGR214W      RPS0A

YGR258C       RAD2

YGR260W      TNA1

YGR283C

YHL001W       RPL14B

YHL015W       RPS20

YHL016C        DUR3

YHL033C        RPL8A

YHL044W

YHL046C

YHR009C

YHR010W      RPL27A

YHR021C       RPS27B

YHR021W-A  ECM12

YHR033W

YHR091C       MSR1

YHR096C       HXT5

YHR122W

YHR141C       RPL42B

YHR142W      CHS7

YHR203C       RPS4B

YHR204W      MNL1

YHR218W

YIL018W        RPL2B

YIL052C         RPL34B

YIL053W        RHR2

YIL055C

YIL121W

YIL133C         RPL16A

YIL148W        RPL40A

YIL149C         MLP2

YIR016W

YJL026W        RNR2

YJL027C

YJL029C         VPS53

YJL049W

YJL089W        SIP4

YJL090C         DPB11

YJL133W        MRS3

YJL134W        LCB3

YJL136C         RPS21B

YJL177W        RPL17B

YJL178C

YJL189W        RPL39

YJL190C         RPS22A

YJL191W        RPS14B

YJL192C

YJR058C         APS2

YJR059W        PTK2

YJR094C         IME1

YJR094W-A   RPL43B

YJR123W        RPS5

YJR132W        NMD5

YJR134C         SGM1

YJR139C         HOM6

YJR145C         RPS4A

YJR147W        HMS2

YKL006C-A   SFT1

YKL006W      RPL14A

YKL039W      PTM1

YKL040C       NFU1

YKL062W      MSN4

YKL063C

YKL156W      RPS27A

YKL175W      ZRT3

YKL176C       LST4

YKL178C       STE3

YKL180W      RPL17A

YKL224C

YKR057W      RPS21A

YKR092C       SRP40

YKR093W      PTR2

YKR094C       RPL40B

YKR095W      MLP1

YKR102W      FLO10

YLL039C        UBI4

YLL043W       FPS1

YLL045C        RPL8B

YLL064C

YLL066C

YLR044C        PDC1

YLR047C

YLR048W       RPS0B

YLR061W       RPL22A

YLR074C        BUD20

YLR075W       RPL10

YLR103C        CDC45

YLR104W

YLR166C        SEC10

YLR167W       RPS31

YLR183C        TOS4

YLR185W       RPL37A

YLR254C

YLR256W       HAP1

YLR286C        CTS1

YLR287C

YLR287C-A    RPS30A

YLR310C        CDC25

YLR333C        RPS25B

YLR335W       NUP2

YLR337C        VRP1

YLR340W       RPP0

YLR344W       RPL26A

YLR368W       MDM30

YLR387C

YLR388W       RPS29A

YLR389C        STE23

YLR390W       ECM19

YLR390W-A   CCW14

YLR399C        BDF1

YLR401C

YLR403W       SFP1

YLR437C

YLR438W       CAR2

YLR441C        RPS1A

YLR447C        VMA6

YLR448W       RPL6B

YLR460C

YLR461W       PAU4

YLR462W

YML024W      RPS17A

YML025C

YML026C       RPS18B

YML063W      RPS1B

YML064C       TEM1

YML073C       RPL6A

YML088W      UFO1

YML091C       RPM2

YMR013C       SEC59

YMR013W-A

YMR014W      BUD22

YMR015C       ERG5

YMR081C       ISF1

YMR083W      ADH3

YMR099C

YMR100W      MUB1

YMR116C       ASC1

YMR142C       RPL13B

YMR143W      RPS16A

YMR144W

YMR194W      RPL36A

YMR224C       MRE11

YMR229C       RRP5

YMR230W      RPS10B

YMR231W      PEP5

YMR242C       RPL20A

YMR243C       ZRC1

YMR244W

YMR265C

YMR266W      RSN1

YMR325W

YNL010W

YNL011C

YNL066W      SUN4

YNL067W      RPL9B

YNL068C       FKH2

YNL069C       RPL16B

YNL096C       RPS7B

YNL101W

YNL142W      MEP2

YNL144C

YNL154C       YCK2

YNL162W      RPL42A

YNL162W-A

YNL163C       RIA1

YNL178W      RPS3

YNL180C       RHO5

YNL190W

YNL201C       PSY2

YNL216W      RAP1

YNL253W

YNL254C

YNL288W      CAF40

YNL302C       RPS19B

YNL329C       PEX6

YNL336W      COS1

YNL339C       YRF1-6

YNR069C

YNR070W      PDR18

YOL039W      RPP2A

YOL040C       RPS15

YOL052C-A   DDR2

YOL059W      GPD2

YOL060C       MAM3

YOL082W      CVT19

YOL084W      PHM7

YOL086C       ADH1

YOL109W

YOL121C       RPS19A

YOL127W      RPL25

YOL128C       YGK3

YOL136C       PFK27

YOR043W      WHI2

YOR056C       NOB1

YOR057W      SGT1

YOR095C       RKI1

YOR096W      RPS7A

YOR100C       CRC1

YOR101W      RAS1

YOR124C       UBP2

YOR161C

YOR179C

YOR234C       RPL33B

YOR236W      DFR1

YOR292C

YOR293W      RPS10A

YOR302W

YOR303W      CPA1

YOR312C       RPL20B

YOR338W

YOR340C       RPA43

YOR341W      RPA190

YOR342C

YOR344C       TYE7

YOR354C       MSC6

YOR355W      GDS1

YOR359W      VTS1

YOR365C

YOR367W      SCP1

YOR369C       RPS12

YOR387C

YPL016W       SWI1

YPL017C

YPL079W       RPL21B

YPL081W       RPS9A

YPL082C        MOT1

YPL090C        RPS6A

YPL095C

YPL131W       RPL5

YPL143W       RPL33A

YPL144W

YPL145C        KES1

YPL162C

YPL189W       GUP2

YPL190C        NAB3

YPL198W       RPL7B

YPL199C

YPL220W       RPL1A

YPL226W       NEW1

YPL227C        ALG5

YPL249C-A    RPL36B

YPR029C        APL4

YPR030W       CSR2

YPR042C        PUF2

YPR043W       RPL43A

YPR080W       TEF1

YPR102C        RPL11A

YPR103W       PRE2

YPR105C        COG4

YPR106W       ISR1

YPR110C        RPC40

YPR111W       DBF20

YPR131C        NAT3

YPR132W       RPS23B

YPR161C        SGV1

YPR202W

 

Genes Not Found:

 

LSR1

SNR17A

SNR17B

SNR34

SNR39B

SNR40

SNR47

SNR62

SNR72

SNR73

SNR74

SNR75

SNR76

SNR77

SNR78

TE%28UUC%29L

TK%28UUU%29D

TL%28UAA%29B1

TM%28CAU%29J1

TP%28AGG%29C

TP%28UGG%29O3

TR%28CCG%29L

TT%28AGU%29C

YBL071C-B

YCR024C-B

YER188C-A

YGL188C-A

YGR027W-A

YGR027W-B

YHL015W-A

YJL133C-A

YLR264C-A

YMR230W-A

YMR242W-A

YNL024C-A

YNL067W-B

YOR161C-C

YOR343W-A

YOR343W-B

YPL189C-A

MIPS Functional Classification

Category          p-value In Category from Cluster          k          f

ribosome biogenesis      1e-14   RPL19B RPS8A RPL23A RPL32 RPS11B RPL19A RPS6B RPS9B RPL21A RPS14A RPS29B RPL31A RPL13A RPS16B RPP1B RPL41B RPL35B RPL41A RPL35A RPS11A RSM10 RPS13 RPL12B RPS17B RPS18A RPL27B RPL37B RPL12A RPL34A RPS24A RPS8B RPL23B RPS26B RPL22B RPL2A RPL30 RPL24A RPL7A RPL28 RPS2 RPL1B RPS26A RPS25A RPL26B MRP13 RPL11B RPS23A RPL24B RPS0A RPL14B RPS20 RPL8A RPL27A RPS27B RPL42B RPS4B RPL2B RPL34B RPL16A RPL40A RPS21B RPL17B RPL39 RPS22A RPS14B RPL43B RPS5 RPS4A RPL14A RPS27A RPL17A RPS21A RPL40B RPL8B RPS0B RPL22A RPL10 RPS31 RPL37A RPS30A RPS25B RPP0 RPL26A RPS29A RPS1A RPL6B RPS17A YML025C RPS18B RPS1B RPL6A ASC1 RPL13B RPS16A RPL36A RPS10B RPL20A RPL9B RPL16B RPS7B RPL42A RPS3 RPS19B RPP2A RPS15 RPS19A RPL25 RPS7A RPL33B RPS10A RPL20B RPS12 RPL21B RPS9A RPS6A RPL5 RPL33A RPL7B RPL1A RPL36B RPL43A RPL11A RPS23B           123      215

PROTEIN SYNTHESIS          1e-14   RPL19B RPS8A RPL23A RPL32 RPS11B RPL19A TEF2 RPS6B RPS9B RPL21A RPS14A RPS29B RPL31A RPL13A RPS16B RPP1B RPL41B RPL35B RPL41A RPL35A SSB1 RPS11A KRS1 RSM10 RPS13 RPL12B RPS17B RPS18A RPL27B RPL37B HYP2 RPL12A RPL34A RPS24A RPS8B RPL23B RPS26B FRS2 RPL22B RPL2A RPL30 RPL24A RPL7A RPL28 RPS2 RPL1B RPS26A RPS25A RPL26B MRP13 RPL11B RPS23A RPL24B RPS0A RPL14B RPS20 RPL8A RPL27A RPS27B MSR1 RPL42B RPS4B RPL2B RPL34B RPL16A RPL40A RPS21B RPL17B RPL39 RPS22A RPS14B RPL43B RPS5 RPS4A RPL14A RPS27A RPL17A RPS21A RPL40B UBI4 RPL8B RPS0B RPL22A RPL10 RPS31 RPL37A RPS30A RPS25B RPP0 RPL26A RPS29A RPS1A RPL6B RPS17A YML025C RPS18B RPS1B RPL6A ASC1 RPL13B RPS16A RPL36A RPS10B RPL20A RPL9B RPL16B RPS7B RPL42A RIA1 RPS3 RAP1 RPS19B RPP2A RPS15 RPS19A RPL25 RPS7A RPL33B RPS10A YOR302W RPL20B RPS12 RPL21B RPS9A RPS6A RPL5 RPL33A RPL7B RPL1A NEW1 RPL36B RPL43A TEF1 RPL11A RPS23B     135      359

cytoplasm         1.75415e-14    CDC19 RPL19B RPS8A RPL23A RPL32 RPS11B RPL19A TKL2 TEF2 RPS6B RPS9B RPL21A RPS14A GPD1 RPS29B RPL31A RPL13A RPS16B RPP1B RPL41B RPL35B RPL41A RPL35A SSB1 RPS11A KRS1 RPS13 CCT6 PRO1 ADE8 RPL12B RPS17B RPS18A RPL27B RPL37B HYP2 RPL12A HAT2 RPL34A RPS24A RPS8B RPL23B RPS26B CCA1 FRS2 RPL30 RPL24A RPL7A RPL28 RPS2 RPL1B RPS26A RPS25A RPL26B RPL11B RPS23A RPL24B TDH3 RPS0A RPL14B RPS20 RPL8A RPL27A RPS27B RPL42B RPS4B RPL2B RPL34B RPL16A RPL40A RNR2 RPS21B RPL17B RPL39 RPS22A RPS14B RPL43B RPS5 RPS4A RPL14A MSN4 RPS27A RPL17A RPS21A RPL40B UBI4 RPL8B PDC1 RPS0B RPL10 SEC10 RPS31 RPL37A RPS30A RPS25B RPP0 RPL26A RPS29A CAR2 RPS1A RPL6B RPS17A RPS18B RPS1B RPL6A ASC1 RPL13B RPS16A RPL36A RPS10B RPL20A RPL9B RPL16B RPS7B RPL42A RPS3 RPS19B PEX6 RPP2A RPS15 ADH1 RPS19A RPL25 RKI1 RPS7A RAS1 UBP2 DFR1 RPS10A YOR302W CPA1 RPL20B RPS12 RPL21B RPS9A RPS6A RPL5 RPL33A KES1 RPL7B RPL1A RPL36B RPL43A TEF1 RPL11A RPS23B            146            554

SUBCELLULAR LOCALISATION   1.23679e-13    POP5 CDC19 CYC3 OAF1 RFT1 HAP3 PIM1 RPL19B RPS8A AAR2 RHK1 RPL23A RPL32 ROX3 RPS11B RPL19A AAC3 TKL2 TEF2 FZO1 RPS6B RPS9B RPL21A KCC4 AGP1 PMP1 RPS14A HMRA2 HMRA1 GPD1 GPR1 RPS29B RPL31A RPL13A RPS16B RPP1B STF1 RPL41B RPL35B RPL41A RPL35A SSB1 RPS11A KRS1 ENA1 RPS13 CCT6 PRO1 CFT1 ADE8 RPL12B RPS17B ADA2 RPS18A RPL27B RPL37B GCN4 GEA2 HYP2 ANP1 RPL12A HAT2 YPT31 RPL34A RPS24A RPS8B RPL23B RPS26B CCA1 MDJ1 GAT1 FRS2 YFL051C RPL30 RPL24A RCS1 HSF1 MPS2 RPL7A RPL28 SNF4 RPS2 RPL1B RPS26A RPS25A RPL26B MRP13 RPL11B RPS23A RPL24B NSR1 RNR4 TDH3 RPS0A RAD2 RPL14B RPS20 DUR3 RPL8A RPL27A RPS27B MSR1 HXT5 RPL42B CHS7 RPS4B RPL2B RPL34B RPL16A RPL40A MLP2 RNR2 VPS53 SIP4 DPB11 MRS3 RPS21B RPL17B RPL39 RPS22A RPS14B APS2 IME1 RPL43B RPS5 RPS4A SFT1 RPL14A MSN4 RPS27A STE3 RPL17A RPS21A SRP40 PTR2 RPL40B MLP1 FLO10 UBI4 RPL8B PDC1 RPS0B RPL10 CDC45 SEC10 RPS31 RPL37A HAP1 CTS1 RPS30A CDC25 RPS25B NUP2 VRP1 RPP0 RPL26A RPS29A BDF1 SFP1 CAR2 RPS1A VMA6 RPL6B RPS17A YML025C RPS18B RPS1B RPL6A RPM2 SEC59 ERG5 ADH3 ASC1 RPL13B RPS16A RPL36A MRE11 RRP5 RPS10B PEP5 RPL20A ZRC1 SUN4 RPL9B FKH2 RPL16B RPS7B MEP2 YCK2 RPL42A RPS3 RAP1 RPS19B PEX6 RPP2A RPS15 GPD2 ADH1 RPS19A RPL25 RKI1 RPS7A RAS1 UBP2 DFR1 RPS10A YOR302W CPA1 RPL20B RPA43 RPA190 TYE7 RPS12 SWI1 RPL21B RPS9A MOT1 RPS6A RPL5 RPL33A KES1 NAB3 RPL7B RPL1A ALG5 RPL36B RPL43A TEF1 RPL11A PRE2 RPC40 RPS23B            232      2256

 

 

 

MIPS Phenotypes

Category          p-value In Category from Cluster          k          f

 

 

 

MIPS Subcellular Localization

Category          p-value In Category from Cluster          k          f

cytoplasm         3.17524e-14    CDC19 RPL19B RPS8A RPL23A RPL32 RPS11B RPL19A TKL2 TEF2 RPS6B RPS9B RPL21A SRO9 RPS14A GPD1 RPS29B RPL31A RPL13A RPS16B RPP1B RPL41B RPL35B RPL41A RPL35A SSB1 RPS11A KRS1 RPS13 CCT6 PRO1 ADE8 RPL12B RPS17B RPS18A RPL27B RPL37B HYP2 RPL12A HAT2 RPL34A RPS24A RPS8B RPL23B RPS26B CCA1 FRS2 RPL30 RPL24A RPL7A RPL28 RPS2 RPL1B RPS26A RPS25A RPL26B RPL11B RPS23A RPL24B TDH3 RPS0A RPL14B RPS20 RPL8A RPL27A RPS27B RPL42B RPS4B RPL2B RPL34B RPL16A RPL40A RNR2 RPS21B RPL17B RPL39 RPS22A RPS14B RPL43B RPS5 RPS4A RPL14A MSN4 RPS27A RPL17A RPS21A RPL40B UBI4 RPL8B PDC1 RPS0B RPL22A RPL10 SEC10 RPS31 RPL37A RPS30A RPS25B RPP0 RPL26A RPS29A CAR2 RPS1A RPL6B RPS17A RPS18B RPS1B RPL6A ASC1 RPL13B RPS16A RPL36A RPS10B RPL20A RPL9B RPL16B RPS7B RPL42A RPS3 RPS19B PEX6 RPP2A RPS15 ADH1 RPS19A RPL25 RKI1 RPS7A UBP2 RPL33B DFR1 RPS10A YOR302W CPA1 RPL20B RPS12 RPL21B RPS9A RPS6A RPL5 RPL33A KES1 RPL7B RPL1A RPL36B RPL43A TEF1 RPL11A RPS23B           148      593

 

 

 

MIPS Protein Complexes

Category          p-value In Category from Cluster          k          f

cytoplasmic ribosomal small subunit       1e-14   RPS8A RPS11B RPS6B RPS9B RPS14A RPS29B RPS16B RPS11A RPS13 RPS17B RPS18A RPS24A RPS8B RPS26B RPS2 RPS26A RPS25A RPS23A RPS0A RPS20 RPS27B RPS4B RPS21B RPS22A RPS14B RPS5 RPS4A RPS27A RPS21A RPS0B RPS31 RPS30A RPS25B RPS29A RPS1A RPS17A RPS18B RPS1B ASC1 RPS16A RPS10B RPS7B RPS3 RPS19B RPS15 RPS19A RPS7A RPS10A RPS12 RPS9A RPS6A RPS23B         52        57

Cytoplasmic ribosomes 1e-14   RPL19B RPS8A RPL23A RPL32 RPS11B RPL19A RPS6B RPS9B RPL21A RPS14A RPS29B RPL31A RPL13A RPS16B RPP1B RPL41B RPL35B RPL41A RPL35A RPS11A RPS13 RPL12B RPS17B RPS18A RPL27B RPL37B RPL12A RPL34A RPS24A RPS8B RPL23B RPS26B RPL22B RPL2A RPL30 RPL24A RPL7A RPL28 RPS2 RPL1B RPS26A RPS25A RPL26B RPL11B RPS23A RPL24B RPS0A RPL14B RPS20 RPL8A RPL27A RPS27B RPL42B RPS4B RPL2B RPL34B RPL16A RPL40A RPS21B RPL17B RPL39 RPS22A RPS14B RPL43B RPS5 RPS4A RPL14A RPS27A RPL17A RPS21A RPL40B RPL8B RPS0B RPL22A RPL10 RPS31 RPL37A RPS30A RPS25B RPP0 RPL26A RPS29A RPS1A RPL6B RPS17A RPS18B RPS1B RPL6A ASC1 RPL13B RPS16A RPL36A RPS10B RPL20A RPL9B RPL16B RPS7B RPL42A RPS3 RPS19B RPP2A RPS15 RPS19A RPL25 RPS7A RPL33B RPS10A RPL20B RPS12 RPL21B RPS9A RPS6A RPL5 RPL33A RPL7B RPL1A RPL36B RPL43A RPL11A RPS23B   120      138

cytoplasmic ribosomal large subunit       1e-14   RPL19B RPL23A RPL32 RPL19A RPL21A RPL31A RPL13A RPP1B RPL41B RPL35B RPL41A RPL35A RPL12B RPL27B RPL37B RPL12A RPL34A RPL23B RPL22B RPL2A RPL30 RPL24A RPL7A RPL28 RPL1B RPL26B RPL11B RPL24B RPL14B RPL8A RPL27A RPL42B RPL2B RPL34B RPL16A RPL40A RPL17B RPL39 RPL43B RPL14A RPL17A RPL40B RPL8B RPL22A RPL10 RPL37A RPP0 RPL26A RPL6B RPL6A RPL13B RPL36A RPL20A RPL9B RPL16B RPL42A RPP2A RPL25 RPL33B RPL20B RPL21B RPL5 RPL33A RPL7B RPL1A RPL36B RPL43A RPL11A             68        81

Translation complexes   1e-14   RPL19B RPS8A RPL23A RPL32 RPS11B RPL19A TEF2 RPS6B RPS9B RPL21A RPS14A RPS29B RPL31A RPL13A RPS16B RPP1B RPL41B RPL35B RPL41A RPL35A RPS11A RPS13 RPL12B RPS17B RPS18A RPL27B RPL37B HYP2 RPL12A RPL34A RPS24A RPS8B RPL23B RPS26B RPL22B RPL2A RPL30 RPL24A RPL7A RPL28 RPS2 RPL1B RPS26A RPS25A RPL26B MRP13 RPL11B RPS23A RPL24B RPS0A RPL14B RPS20 RPL8A RPL27A RPS27B RPL42B RPS4B RPL2B RPL34B RPL16A RPL40A RPS21B RPL17B RPL39 RPS22A RPS14B RPL43B RPS5 RPS4A RPL14A RPS27A RPL17A RPS21A RPL40B RPL8B RPS0B RPL22A RPL10 RPS31 RPL37A RPS30A RPS25B RPP0 RPL26A RPS29A RPS1A RPL6B RPS17A RPS18B RPS1B RPL6A ASC1 RPL13B RPS16A RPL36A RPS10B RPL20A RPL9B RPL16B RPS7B RPL42A RPS3 RPS19B RPP2A RPS15 RPS19A RPL25 RPS7A RPL33B RPS10A RPL20B RPS12 RPL21B RPS9A RPS6A RPL5 RPL33A RPL7B RPL1A RPL36B RPL43A TEF1 RPL11A RPS23B    124      240

 

 

 

MIPS Protein Classes

Category          p-value In Category from Cluster          k          f

 

 

 

GO Molecular Function

Category          p-value In Category from Cluster          k          f

structural constituent of ribosome [GO:0003735]          1e-14   RPL19B RPS8A RPL23A RPL32 RPS11B RPL19A RPS6B RPS9B RPL21A RPS14A RPS29B RPL31A RPL13A RPS16B RPP1B RPL41B RPL35B RPL41A RPL35A RPS11A RSM10 RPS13 RPL12B RPS17B RPS18A RPL27B RPL37B RPL12A RPL34A RPS24A RPS8B RPL23B RPS26B RPL22B RPL2A RPL30 RPL24A RPL7A RPL28 RPS2 RPL1B RPS26A RPS25A RPL26B MRP13 RPL11B RPS23A RPL24B RPS0A RPL14B RPS20 RPL8A RPL27A RPS27B RPL42B RPS4B RPL2B RPL34B RPL16A RPL40A RPS21B RPL17B RPL39 RPS22A RPS14B RPL43B RPS5 RPS4A RPL14A RPS27A RPL17A RPS21A RPL40B RPL8B RPS0B RPL22A RPL10 RPS31 RPL37A RPS30A RPS25B RPP0 RPL26A RPS29A RPS1A RPL6B RPS17A YML025C RPS18B RPS1B RPL6A RPL13B RPS16A RPL36A RPS10B RPL20A RPL9B RPL16B RPS7B RPL42A RPS3 RPS19B RPP2A RPS15 RPS19A RPL25 RPS7A RPL33B RPS10A RPL20B RPS12 RPL21B RPS9A RPS6A RPL5 RPL33A RPL7B RPL1A RPL36B RPL43A RPL11A RPS23B            122      206

structural molecule [GO:0005198]        1.9873e-14      RPL19B RPS8A RPL23A RPL32 RPS11B RPL19A RPS6B RPS9B RPL21A RPS14A RPS29B RPL31A RPL13A RPS16B RPP1B RPL41B RPL35B RPL41A RPL35A RPS11A RSM10 RPS13 RPL12B RPS17B RPS18A RPL27B RPL37B RPL12A RPL34A RPS24A RPS8B RPL23B RPS26B RPL22B RPL2A RPL30 RPL24A MPS2 RPL7A RPL28 RPS2 RPL1B RPS26A RPS25A RPL26B MRP13 RPL11B RPS23A RPL24B RPS0A RPL14B RPS20 RPL8A RPL27A RPS27B RPL42B RPS4B RPL2B RPL34B RPL16A RPL40A RPS21B RPL17B RPL39 RPS22A RPS14B RPL43B RPS5 RPS4A RPL14A RPS27A RPL17A RPS21A RPL40B RPL8B RPS0B RPL22A RPL10 RPS31 RPL37A RPS30A RPS25B NUP2 RPP0 RPL26A RPS29A CCW14 RPS1A RPL6B RPS17A YML025C RPS18B RPS1B RPL6A RPL13B RPS16A RPL36A RPS10B RPL20A RPL9B RPL16B RPS7B RPL42A RPS3 RPS19B RPP2A RPS15 RPS19A RPL25 RPS7A RPL33B RPS10A RPL20B RPS12 RPL21B RPS9A RPS6A RPL5 RPL33A RPL7B RPL1A RPL36B RPL43A RPL11A RPS23B         125      310

 

 

 

GO Biological Process

Category          p-value In Category from Cluster          k          f

protein biosynthesis [GO:0006412]       1e-14   RFT1 RPL19B RPS8A RHK1 RPL23A RPL32 RPS11B RPL19A TEF2 RPS6B RPS9B RPL21A SRO9 RPS14A PSA1 RPS29B RPL31A RPL13A RPS16B RPP1B RPL41B RPL35B RPL41A PPH22 RPL35A SSB1 RPS11A KRS1 RSM10 RPS13 RPL12B RPS17B RPS18A RPL27B RPL37B HYP2 ANP1 RPL12A RPL34A RPS24A RPS8B RPL23B RPS26B CCA1 FRS2 RPL22B RPL2A RPL30 RPL24A RPL7A RPL28 RPS2 RPL1B GPI10 RPS26A RPS25A RPL26B MRP13 RPL11B RPS23A RPL24B RPS0A RPL14B RPS20 RPL8A RPL27A RPS27B MSR1 RPL42B RPS4B RPL2B RPL34B RPL16A RPL40A RPS21B RPL17B RPL39 RPS22A RPS14B RPL43B RPS5 RPS4A RPL14A RPS27A RPL17A RPS21A RPL40B RPL8B RPS0B RPL22A RPL10 RPS31 RPL37A RPS30A RPS25B RPP0 RPL26A RPS29A RPS1A RPL6B RPS17A YML025C RPS18B RPS1B RPL6A RPM2 SEC59 RPL13B RPS16A RPL36A RPS10B RPL20A RPL9B RPL16B RPS7B RPL42A RPS3 RPS19B RPP2A RPS15 RPS19A RPL25 RPS7A RPL33B RPS10A RPL20B RPS12 RPL21B RPS9A RPS6A RPL5 RPL33A RPL7B RPL1A ALG5 RPL36B RPL43A TEF1 RPL11A RPS23B 140      415

macromolecule biosynthesis [GO:0009059]      1e-14   RFT1 RPL19B SKT5 RPS8A RHK1 RPL23A RPL32 RPS11B RPL19A TEF2 RPS6B RPS9B RPL21A SRO9 RPS14A PSA1 RPS29B RPL31A RPL13A RPS16B RPP1B RPL41B RPL35B RPL41A PPH22 RPL35A SSB1 RPS11A KRS1 RSM10 RPS13 RPL12B RPS17B RPS18A RPL27B RPL37B HYP2 ANP1 RPL12A RPL34A RPS24A RPS8B RPL23B RPS26B CCA1 FRS2 RPL22B RPL2A RPL30 RPL24A RPL7A RPL28 RPS2 RPL1B GPI10 RPS26A RPS25A RPL26B MRP13 RPL11B RPS23A RPL24B RPS0A RPL14B RPS20 RPL8A RPL27A RPS27B MSR1 RPL42B CHS7 RPS4B RPL2B RPL34B RPL16A RPL40A RPS21B RPL17B RPL39 RPS22A RPS14B RPL43B RPS5 RPS4A RPL14A RPS27A RPL17A RPS21A RPL40B RPL8B RPS0B RPL22A RPL10 RPS31 RPL37A RPS30A RPS25B RPP0 RPL26A RPS29A RPS1A RPL6B RPS17A YML025C RPS18B RPS1B RPL6A RPM2 SEC59 RPL13B RPS16A RPL36A RPS10B RPL20A RPL9B RPL16B RPS7B RPL42A RPS3 RPS19B RPP2A RPS15 RPS19A RPL25 RPS7A RPL33B RPS10A RPL20B RPS12 RPL21B RPS9A RPS6A RPL5 RPL33A RPL7B RPL1A ALG5 RPL36B RPL43A TEF1 RPL11A RPS23B   142      422

biosynthesis [GO:0009058]      1e-14   RFT1 RPL19B SKT5 RPS8A RHK1 RPL23A RPL32 RPS11B RPL19A TEF2 RPS6B RPS9B RPL21A HIS4 SRO9 RPS14A GPM2 PSA1 RPS29B RPL31A RPL13A RPS16B RPP1B RPL41B RPL35B RPL41A PPH22 RPL35A SSB1 RPS11A KRS1 RSM10 RPS13 PRO1 ADE8 RPL12B RPS17B RPS18A RPL27B RPL37B GCN4 HYP2 ANP1 RPL12A RPL34A RPS24A RPS8B RPL23B RPS26B CCA1 FRS2 RPL22B RPL2A RPL30 RPL24A RPL7A RPL28 RPS2 RPL1B GPI10 RPS26A RPS25A RPL26B MRP13 RPL11B RPS23A RPL24B TDH3 RPS0A RPL14B RPS20 RPL8A RPL27A RPS27B MSR1 RPL42B CHS7 RPS4B RPL2B RPL34B RHR2 RPL16A RPL40A SIP4 LCB3 RPS21B RPL17B RPL39 RPS22A RPS14B RPL43B RPS5 RPS4A RPL14A RPS27A RPL17A RPS21A RPL40B RPL8B RPS0B RPL22A RPL10 RPS31 RPL37A RPS30A RPS25B RPP0 RPL26A RPS29A RPS1A RPL6B RPS17A YML025C RPS18B RPS1B RPL6A RPM2 SEC59 ERG5 RPL13B RPS16A RPL36A RPS10B RPL20A RPL9B RPL16B RPS7B RPL42A RPS3 RPS19B RPP2A RPS15 RPS19A RPL25 RPS7A RPL33B RPS10A CPA1 RPL20B RPS12 RPL21B RPS9A RPS6A RPL5 RPL33A KES1 RPL7B RPL1A ALG5 RPL36B RPL43A TEF1 RPL11A RPS23B     154      731

protein metabolism [GO:0019538]        1e-14   CYC3 RFT1 PIM1 RPL19B AST1 RPS8A RHK1 RPL23A RPL32 RPS11B RPL19A TEF2 RPS6B RPS9B RPL21A KCC4 SRO9 RPS14A PSA1 RPS29B RPL31A RPL13A RPS16B RPP1B RPL41B RPL35B RPL41A PPH22 RPL35A SSB1 RPS11A KRS1 RSM10 RPS13 CCT6 SIZ1 RPL12B RPS17B ADA2 RPS18A RPL27B RPL37B GEA2 HYP2 ANP1 RPL12A YPT31 RPL34A RPS24A RPS8B RPL23B RPS26B CCA1 MDJ1 FRS2 EPL1 RPL22B RPL2A RPL30 RPL24A RPL7A RPL28 VPS73 RPS2 MON1 RPL1B HUL5 GPI10 RPS26A RPS25A RPL26B MRP13 RPL11B RPS23A RPL24B RPS0A RPL14B RPS20 RPL8A RPL27A RPS27B MSR1 RPL42B CHS7 RPS4B MNL1 RPL2B RPL34B RPL16A RPL40A MLP2 VPS53 RPS21B RPL17B RPL39 RPS22A RPS14B RPL43B RPS5 NMD5 RPS4A SFT1 RPL14A RPS27A LST4 RPL17A RPS21A RPL40B MLP1 UBI4 RPL8B RPS0B RPL22A RPL10 SEC10 RPS31 RPL37A RPS30A RPS25B NUP2 RPP0 RPL26A RPS29A STE23 RPS1A RPL6B RPS17A YML025C RPS18B RPS1B RPL6A UFO1 RPM2 SEC59 RPL13B RPS16A RPL36A RPS10B PEP5 RPL20A RPL9B RPL16B RPS7B YCK2 RPL42A RPS3 RPS19B RPP2A RPS15 CVT19 RPS19A RPL25 YGK3 NOB1 RPS7A UBP2 RPL33B RPS10A RPL20B VTS1 RPS12 RPL21B RPS9A RPS6A RPL5 RPL33A RPL7B RPL1A ALG5 RPL36B RPL43A TEF1 RPL11A PRE2 COG4 DBF20 NAT3 RPS23B SGV1            179      1168

ribosomal subunit assembly [GO:0042257]       9.30367e-14    RPS11B RPS14A RPS11A SSF2 RPL12B RPS17B RPL12A RPL11B NSR1 RPS0A RPS14B RPS0B RPL10 RPS31 RPP0 RPL6B RPS17A YML025C RPL6A RPL25 RPL5 RPL11A            22        48

ribosome assembly [GO:0042255]       2.65898e-13    RPS11B RPS14A RPS11A SSF2 RPL12B RPS17B RPL12A RPL11B NSR1 RPS0A RPS14B RPS0B RPL10 RPS31 RPP0 RPL6B RPS17A YML025C RPL6A RPL25 RPL5 RPL11A          22        50

metabolism [GO:0008152]       1.06789e-11    POP5 CDC19 CYC3 OAF1 RFT1 HAP3 PIM1 RPL19B SKT5 AST1 RPS8A AAR2 RHK1 RPL23A RPL32 ROX3 RPS11B RPL19A TKL2 TEF2 RPS6B NTC20 RPS9B RPL21A KCC4 HIS4 SRO9 RPS14A HMRA2 HMRA1 GPM2 PSA1 RPS29B RPL31A RPL13A RPS16B RPP1B RPL41B RPL35B SFA1 RPL41A PPH22 RPL35A SSB1 RPS11A KRS1 RSM10 RPS13 CCT6 PRO1 CFT1 UTP4 ADE8 SIZ1 RPL12B RPS17B ADA2 UTP6 RPS18A RPL27B RPL37B GCN4 GEA2 HYP2 ANP1 RPL12A HAT2 YPT31 FIR1 ACA1 RPL34A RPS24A RPS8B SLX8 RPL23B RPS26B CCA1 RPH1 HSP12 MDJ1 GAT1 FRS2 EPL1 RPL22B RPL2A RPL30 RPL24A RCS1 RPL7A GUP1 RPL28 VPS73 SNF4 RPS2 MON1 RPL1B MRM2 HUL5 GPI10 RPS26A RPS25A RPL26B MRP13 RPL11B RPS23A RPL24B NSR1 RNR4 TDH3 RPS0A RAD2 RPL14B RPS20 RPL8A RPL27A RPS27B MSR1 RPL42B CHS7 RPS4B MNL1 RPL2B RPL34B RHR2 RPL16A RPL40A MLP2 RNR2 VPS53 SIP4 DPB11 MRS3 LCB3 RPS21B RPL17B RPL39 RPS22A RPS14B RPL43B RPS5 NMD5 HOM6 RPS4A SFT1 RPL14A MSN4 RPS27A LST4 RPL17A RPS21A RPL40B MLP1 UBI4 RPL8B PDC1 RPS0B RPL22A RPL10 CDC45 SEC10 RPS31 RPL37A HAP1 RPS30A RPS25B NUP2 RPP0 RPL26A RPS29A STE23 YLR401C CAR2 RPS1A RPL6B RPS17A YML025C RPS18B RPS1B RPL6A UFO1 RPM2 SEC59 ERG5 ISF1 ADH3 RPL13B RPS16A RPL36A MRE11 RRP5 RPS10B PEP5 RPL20A ZRC1 RPL9B FKH2 RPL16B RPS7B YCK2 RPL42A RPS3 RAP1 CAF40 RPS19B RPP2A RPS15 GPD2 CVT19 ADH1 RPS19A RPL25 YGK3 PFK27 NOB1 RKI1 RPS7A CRC1 UBP2 RPL33B DFR1 RPS10A CPA1 RPL20B RPA43 RPA190 TYE7 MSC6 GDS1 VTS1 RPS12 SWI1 RPL21B RPS9A MOT1 RPS6A RPL5 RPL33A KES1 NAB3 RPL7B RPL1A ALG5 RPL36B PUF2 RPL43A TEF1 RPL11A PRE2 COG4 RPC40 DBF20 NAT3 RPS23B SGV1             254      2693

ribosomal small subunit assembly and maintenance [GO:0000028]         5.4402e-10      RPS11B RPS14A RPS11A RPS17B NSR1 RPS0A RPS14B RPS0B RPS31 RPS17A     10        13

cell growth and/or maintenance [GO:0008151] 9.81088e-10    POP5 CDC19 CYC3 OAF1 RFT1 HAP3 PIM1 RPL19B SKT5 AST1 KTI11 RPS8A AAR2 RHK1 RPL23A RPL32 ROX3 RPS11B RPL19A AAC3 TKL2 TEF2 FZO1 RPS6B NTC20 RPS9B RPL21A KCC4 AGP1 HIS4 SRO9 PMP1 RPS14A HMRA2 HMRA1 GPM2 GPD1 GPR1 PSA1 TSR1 RPS29B RPL31A RPL13A RPS16B RPP1B STF1 RPL41B RPL35B SFA1 RPL41A PPH22 RPL35A SSB1 RPS11A YDR036C KRS1 ENA1 RSM10 RPS13 CCT6 PMP3 PRO1 CFT1 SSF2 UTP4 YCG1 SHE9 ADE8 SIZ1 RPL12B RPS17B ADA2 UTP6 RPS18A UGO1 RPL27B RPL37B GCN4 GEA2 HYP2 ANP1 RPL12A HAT2 YPT31 FIR1 ACA1 SPO73 RPL34A RPS24A RPS8B SLX8 RPL23B RPS26B CCA1 RPH1 HSP12 MDJ1 GAT1 FRS2 BUD27 EPL1 RPL22B RPL2A RPL30 RPL24A RCS1 HSF1 MPS2 RPL7A GUP1 RPL28 VPS73 SNF4 RPS2 MON1 RPL1B MRM2 HUL5 GPI10 RPS26A RPS25A RPL26B MRP13 RPL11B RPS23A RPL24B NSR1 RNR4 TDH3 RPS0A RAD2 TNA1 RPL14B RPS20 DUR3 RPL8A RPL27A RPS27B ECM12 MSR1 HXT5 RPL42B CHS7 RPS4B MNL1 RPL2B RPL34B RHR2 RPL16A RPL40A MLP2 RNR2 VPS53 SIP4 DPB11 MRS3 LCB3 RPS21B RPL17B RPL39 RPS22A RPS14B APS2 PTK2 IME1 RPL43B RPS5 NMD5 HOM6 RPS4A HMS2 SFT1 RPL14A NFU1 MSN4 RPS27A ZRT3 LST4 STE3 RPL17A RPS21A SRP40 PTR2 RPL40B MLP1 UBI4 FPS1 RPL8B PDC1 RPS0B RPL22A BUD20 RPL10 CDC45 SEC10 RPS31 RPL37A HAP1 CTS1 RPS30A CDC25 RPS25B NUP2 VRP1 RPP0 RPL26A MDM30 RPS29A STE23 ECM19 CCW14 BDF1 YLR401C SFP1 CAR2 RPS1A VMA6 RPL6B RPS17A YML025C RPS18B RPS1B TEM1 RPL6A UFO1 RPM2 SEC59 BUD22 ERG5 ISF1 ADH3 MUB1 RPL13B RPS16A RPL36A MRE11 RRP5 RPS10B PEP5 RPL20A ZRC1 SUN4 RPL9B FKH2 RPL16B RPS7B MEP2 YCK2 RPL42A RIA1 RPS3 RAP1 CAF40 RPS19B PEX6 RPP2A RPS15 DDR2 GPD2 MAM3 CVT19 ADH1 RPS19A RPL25 YGK3 PFK27 WHI2 NOB1 SGT1 RKI1 RPS7A CRC1 RAS1 UBP2 RPL33B DFR1 RPS10A CPA1 RPL20B RPA43 RPA190 TYE7 MSC6 GDS1 VTS1 RPS12 SWI1 RPL21B RPS9A MOT1 RPS6A RPL5 RPL33A KES1 NAB3 RPL7B RPL1A ALG5 RPL36B APL4 CSR2 PUF2 RPL43A TEF1 RPL11A PRE2 COG4 RPC40 DBF20 NAT3 RPS23B SGV1            312      3657

regulation of translational fidelity [GO:0006450]            7.30039e-09    RPS11B RPS9B RPS11A RPS2 RPS23A RPS9A RPS23B           7          7

ribosomal large subunit assembly and maintenance [GO:0000027]         2.01474e-06    SSF2 RPL12B RPL12A RPL11B RPL10 RPP0 RPL6B YML025C RPL6A RPL25 RPL5 RPL11A       12        35

ribosome biogenesis and assembly [GO:0042254]        2.31629e-06    POP5 RPS11B RPS14A TSR1 RPS11A SSF2 UTP4 RPL12B RPS17B UTP6 RPL12A RPL30 RPL11B NSR1 RPS0A RPS14B RPS0B RPL10 RPS31 RPP0 RPL6B RPS17A YML025C RPL6A RRP5 RIA1 RPL25 RPL5 RPL11A       29        165

 

 

 

GO Cellular Component

Category          p-value In Category from Cluster          k          f

eukaryotic 48S initiation complex [GO:0016283]          1e-14   RPS8A RPS11B RPS6B RPS9B RPS14A RPS29B RPS16B RPS11A RPS13 RPS17B RPS18A RPS24A RPS8B RPS26B RPS2 RPS26A RPS25A RPS23A RPS0A RPS20 RPS27B RPS4B RPS21B RPS22A RPS14B RPS5 RPS4A RPS27A RPS21A RPS0B RPS31 RPS30A RPS25B RPS29A RPS1A RPS17A RPS18B RPS1B RPS16A RPS10B RPS7B RPS3 RPS19B RPS15 RPS19A RPS7A RPS10A RPS12 RPS9A RPS6A RPS23B      51        61

cytosolic small ribosomal subunit (sensu Eukarya) [GO:0005843]          1e-14   RPS8A RPS11B RPS6B RPS9B RPS14A RPS29B RPS16B RPS11A RPS13 RPS17B RPS18A RPS24A RPS8B RPS26B RPS2 RPS26A RPS25A RPS23A RPS0A RPS20 RPS27B RPS4B RPS21B RPS22A RPS14B RPS5 RPS4A RPS27A RPS21A RPS0B RPS31 RPS30A RPS25B RPS29A RPS1A RPS17A RPS18B RPS1B RPS16A RPS10B RPS7B RPS3 RPS19B RPS15 RPS19A RPS7A RPS10A RPS12 RPS9A RPS6A RPS23B      51        61

cytosolic large ribosomal subunit (sensu Eukarya) [GO:0005842]          1e-14   RPL19B RPL23A RPL32 RPL19A RPL21A RPL31A RPL13A RPP1B RPL41B RPL35B RPL41A RPL35A RPL12B RPL27B RPL37B RPL12A RPL34A RPL23B RPL22B RPL2A RPL30 RPL24A RPL7A RPL28 RPL1B RPL26B RPL11B RPL24B RPL14B RPL8A RPL27A RPL42B RPL2B RPL34B RPL16A RPL40A RPL17B RPL39 RPL43B RPL14A RPL17A RPL40B RPL8B RPL22A RPL10 RPL37A RPP0 RPL26A RPL6B RPL6A RPL13B RPL36A RPL20A RPL9B RPL16B RPL42A RPP2A RPL25 RPL33B RPL20B RPL21B RPL5 RPL33A RPL7B RPL1A RPL36B RPL43A RPL11A    68            83

cytosolic ribosome (sensu Eukarya) [GO:0005830]       1e-14   RPL19B RPS8A RPL23A RPL32 RPS11B RPL19A RPS6B RPS9B RPL21A RPS14A RPS29B RPL31A RPL13A RPS16B RPP1B RPL41B RPL35B RPL41A RPL35A RPS11A RPS13 RPL12B RPS17B RPS18A RPL27B RPL37B RPL12A RPL34A RPS24A RPS8B RPL23B RPS26B RPL22B RPL2A RPL30 RPL24A RPL7A RPL28 RPS2 RPL1B RPS26A RPS25A RPL26B RPL11B RPS23A RPL24B RPS0A RPL14B RPS20 RPL8A RPL27A RPS27B RPL42B RPS4B RPL2B RPL34B RPL16A RPL40A RPS21B RPL17B RPL39 RPS22A RPS14B RPL43B RPS5 RPS4A RPL14A RPS27A RPL17A RPS21A RPL40B RPL8B RPS0B RPL22A RPL10 RPS31 RPL37A RPS30A RPS25B RPP0 RPL26A RPS29A RPS1A RPL6B RPS17A RPS18B RPS1B RPL6A RPL13B RPS16A RPL36A RPS10B RPL20A RPL9B RPL16B RPS7B RPL42A RPS3 RPS19B RPP2A RPS15 RPS19A RPL25 RPS7A RPL33B RPS10A RPL20B RPS12 RPL21B RPS9A RPS6A RPL5 RPL33A RPL7B RPL1A RPL36B RPL43A RPL11A RPS23B           119      151

eukaryotic 43S pre-initiation complex [GO:0016282]    1e-14   RPS8A RPS11B RPS6B RPS9B RPS14A RPS29B RPS16B RPS11A RPS13 RPS17B RPS18A RPS24A RPS8B RPS26B RPS2 RPS26A RPS25A RPS23A RPS0A RPS20 RPS27B RPS4B RPS21B RPS22A RPS14B RPS5 RPS4A RPS27A RPS21A RPS0B RPS31 RPS30A RPS25B RPS29A RPS1A RPS17A RPS18B RPS1B RPS16A RPS10B RPS7B RPS3 RPS19B RPS15 RPS19A RPS7A RPS10A RPS12 RPS9A RPS6A RPS23B      51        67

small ribosomal subunit [GO:0015935] 1e-14   RPS8A RPS11B RPS6B RPS9B RPS14A RPS29B RPS16B RPS11A RSM10 RPS13 RPS17B RPS18A RPS24A RPS8B RPS26B RPS2 RPS26A RPS25A MRP13 RPS23A RPS0A RPS20 RPS27B RPS4B RPS21B RPS22A RPS14B RPS5 RPS4A RPS27A RPS21A RPS0B RPS31 RPS30A RPS25B RPS29A RPS1A RPS17A RPS18B RPS1B RPS16A RPS10B RPS7B RPS3 RPS19B RPS15 RPS19A RPS7A RPS10A RPS12 RPS9A RPS6A RPS23B      53        88

large ribosomal subunit [GO:0015934]  1e-14   RPL19B RPL23A RPL32 RPL19A RPL21A RPL31A RPL13A RPP1B RPL41B RPL35B RPL41A RPL35A RPL12B RPL27B RPL37B RPL12A RPL34A RPL23B RPL22B RPL2A RPL30 RPL24A RPL7A RPL28 RPL1B RPL26B RPL11B RPL24B RPL14B RPL8A RPL27A RPL42B RPL2B RPL34B RPL16A RPL40A RPL17B RPL39 RPL43B RPL14A RPL17A RPL40B RPL8B RPL22A RPL10 RPL37A RPP0 RPL26A RPL6B YML025C RPL6A RPL13B RPL36A RPL20A RPL9B RPL16B RPL42A RPP2A RPL25 RPL33B RPL20B RPL21B RPL5 RPL33A RPL7B RPL1A RPL36B RPL43A RPL11A          69        122

 

ribosome [GO:0005840]          1e-14   RPL19B RPS8A RPL23A RPL32 RPS11B RPL19A TEF2 RPS6B RPS9B RPL21A SRO9 RPS14A RPS29B RPL31A RPL13A RPS16B RPP1B RPL41B RPL35B RPL41A RPL35A SSB1 RPS11A RSM10 RPS13 RPL12B RPS17B RPS18A RPL27B RPL37B HYP2 RPL12A RPL34A RPS24A RPS8B RPL23B RPS26B RPL22B RPL2A RPL30 RPL24A RPL7A RPL28 RPS2 RPL1B RPS26A RPS25A RPL26B MRP13 RPL11B RPS23A RPL24B RPS0A RPL14B RPS20 RPL8A RPL27A RPS27B RPL42B RPS4B RPL2B RPL34B RPL16A RPL40A RPS21B RPL17B RPL39 RPS22A RPS14B RPL43B RPS5 RPS4A RPL14A RPS27A RPL17A RPS21A RPL40B RPL8B RPS0B RPL22A RPL10 RPS31 RPL37A RPS30A RPS25B RPP0 RPL26A RPS29A RPS1A RPL6B RPS17A YML025C RPS18B RPS1B RPL6A RPL13B RPS16A RPL36A RPS10B RPL20A RPL9B RPL16B RPS7B RPL42A RPS3 RPS19B RPP2A RPS15 RPS19A RPL25 RPS7A RPL33B RPS10A RPL20B RPS12 RPL21B RPS9A RPS6A RPL5 RPL33A RPL7B RPL1A RPL36B RPL43A TEF1 RPL11A RPS23B           127      258

ribonucleoprotein complex [GO:0030529]        1e-14   POP5 RPL19B RPS8A RPL23A RPL32 RPS11B RPL19A TEF2 RPS6B NTC20 RPS9B RPL21A SRO9 RPS14A RPS29B RPL31A RPL13A RPS16B RPP1B RPL41B RPL35B RPL41A RPL35A SSB1 RPS11A RSM10 RPS13 UTP4 RPL12B RPS17B UTP6 RPS18A RPL27B RPL37B HYP2 RPL12A RPL34A RPS24A RPS8B RPL23B RPS26B RPL22B RPL2A RPL30 RPL24A RPL7A RPL28 RPS2 RPL1B RPS26A RPS25A RPL26B MRP13 RPL11B RPS23A RPL24B RPS0A RPL14B RPS20 RPL8A RPL27A RPS27B RPL42B RPS4B RPL2B RPL34B RPL16A RPL40A RPS21B RPL17B RPL39 RPS22A RPS14B RPL43B RPS5 RPS4A RPL14A RPS27A RPL17A RPS21A RPL40B RPL8B RPS0B RPL22A RPL10 RPS31 RPL37A RPS30A RPS25B RPP0 RPL26A RPS29A RPS1A RPL6B RPS17A YML025C RPS18B RPS1B RPL6A RPL13B RPS16A RPL36A RRP5 RPS10B RPL20A RPL9B RPL16B RPS7B RPL42A RPS3 RPS19B RPP2A RPS15 RPS19A RPL25 RPS7A RPL33B RPS10A RPL20B RPS12 RPL21B RPS9A RPS6A RPL5 RPL33A RPL7B RPL1A RPL36B RPL43A TEF1 RPL11A RPS23B          132      380

cytoplasm [GO:0005737]         1e-14   CDC19 CYC3 RFT1 PIM1 RPL19B SKT5 RPS8A RHK1 RPL23A RPL32 RPS11B RPL19A AAC3 TEF2 FZO1 RPS6B RPS9B RPL21A SRO9 RPS14A GPM2 GPD1 PSA1 RPS29B RPL31A RPL13A RPS16B RPP1B STF1 RPL41B RPL35B RPL41A RPL35A SSB1 RPS11A KRS1 RSM10 RPS13 CCT6 SHE9 RPL12B RPS17B RPS18A UGO1 RPL27B RPL37B GEA2 HYP2 ANP1 RPL12A HAT2 RPL34A RPS24A AST2 RPS8B RPL23B RPS26B CCA1 MDJ1 FRS2 RPL22B RPL2A RPL30 RPL24A RCS1 MPS2 RPL7A RPL28 SNF4 RPS2 RPL1B MRM2 RPS26A RPS25A RPL26B MRP13 RPL11B RPS23A RPL24B TDH3 RPS0A RPL14B RPS20 RPL8A YHR009C RPL27A RPS27B YHR033W MSR1 RPL42B CHS7 RPS4B MNL1 RPL2B RPL34B RPL16A RPL40A RNR2 VPS53 MRS3 LCB3 RPS21B RPL17B RPL39 RPS22A RPS14B APS2 RPL43B RPS5 NMD5 RPS4A SFT1 RPL14A NFU1 RPS27A ZRT3 LST4 RPL17A RPS21A RPL40B UBI4 FPS1 RPL8B RPS0B RPL22A RPL10 SEC10 RPS31 RPL37A CTS1 RPS30A CDC25 RPS25B VRP1 RPP0 RPL26A RPS29A YLR437C CAR2 RPS1A VMA6 RPL6B RPS17A YML025C RPS18B RPS1B TEM1 RPL6A RPM2 ERG5 ADH3 ASC1 RPL13B RPS16A RPL36A RPS10B PEP5 RPL20A ZRC1 SUN4 RPL9B RPL16B RPS7B RPL42A RIA1 RPS3 RPS19B PEX6 RPP2A RPS15 GPD2 CVT19 ADH1 RPS19A RPL25 PFK27 NOB1 RPS7A CRC1 UBP2 RPL33B DFR1 RPS10A CPA1 RPL20B VTS1 RPS12 RPL21B RPS9A RPS6A RPL5 RPL33A RPL7B RPL1A ALG5 RPL36B APL4 RPL43A TEF1 RPL11A PRE2 COG4 RPS23B            203      1810

cytosol [GO:0005829] 1.9873e-14      CDC19 RPL19B RPS8A RPL23A RPL32 RPS11B RPL19A RPS6B RPS9B RPL21A RPS14A GPM2 RPS29B RPL31A RPL13A RPS16B RPP1B RPL41B RPL35B RPL41A RPL35A RPS11A RPS13 RPL12B RPS17B RPS18A RPL27B RPL37B RPL12A RPL34A RPS24A RPS8B RPL23B RPS26B RPL22B RPL2A RPL30 RPL24A RPL7A RPL28 RPS2 RPL1B RPS26A RPS25A RPL26B RPL11B RPS23A RPL24B TDH3 RPS0A RPL14B RPS20 RPL8A RPL27A RPS27B RPL42B RPS4B RPL2B RPL34B RPL16A RPL40A RNR2 RPS21B RPL17B RPL39 RPS22A RPS14B RPL43B RPS5 RPS4A RPL14A RPS27A RPL17A RPS21A RPL40B RPL8B RPS0B RPL22A RPL10 RPS31 RPL37A RPS30A RPS25B RPP0 RPL26A RPS29A RPS1A RPL6B RPS17A RPS18B RPS1B RPL6A RPL13B RPS16A RPL36A RPS10B RPL20A RPL9B RPL16B RPS7B RPL42A RPS3 RPS19B RPP2A RPS15 GPD2 ADH1 RPS19A RPL25 NOB1 RPS7A RPL33B DFR1 RPS10A CPA1 RPL20B VTS1 RPS12 RPL21B RPS9A RPS6A RPL5 RPL33A RPL7B RPL1A RPL36B RPL43A RPL11A PRE2 RPS23B           130            310

intracellular [GO:0005622]       3.79532e-11    POP5 CDC19 CYC3 OAF1 RFT1 HAP3 PIM1 RPL19B SKT5 RPS8A RHK1 RPL23A RPL32 ROX3 RPS11B RPL19A AAC3 TEF2 FZO1 RPS6B NTC20 RPS9B RPL21A AGP1 SRO9 RPS14A HMRA1 GPM2 GPD1 GPR1 PSA1 TSR1 RPS29B RPL31A RPL13A RPS16B RPP1B STF1 RPL41B RPL35B RPL41A RPL35A SSB1 RPS11A KRS1 ENA1 RSM10 RPS13 CCT6 PMP3 CFT1 SSF2 UTP4 YCG1 SHE9 SIZ1 RPL12B RPS17B ADA2 UTP6 RPS18A UGO1 RPL27B RPL37B GCN4 GEA2 HYP2 ANP1 RPL12A HAT2 ACA1 RPL34A RPS24A AST2 RPS8B SLX8 RPL23B RPS26B CCA1 RPH1 MDJ1 GAT1 FRS2 EPL1 RPL22B RPL2A RPL30 RPL24A RCS1 HSF1 MPS2 RPL7A RPL28 SNF4 RPS2 RPL1B MRM2 RPS26A RPS25A RPL26B MRP13 RPL11B RPS23A RPL24B NSR1 RNR4 TDH3 RPS0A RAD2 TNA1 RPL14B RPS20 DUR3 RPL8A YHR009C RPL27A RPS27B YHR033W MSR1 HXT5 RPL42B CHS7 RPS4B MNL1 RPL2B RPL34B RPL16A RPL40A MLP2 RNR2 VPS53 SIP4 DPB11 MRS3 LCB3 RPS21B RPL17B RPL39 RPS22A RPS14B APS2 IME1 RPL43B RPS5 NMD5 RPS4A SFT1 RPL14A NFU1 MSN4 RPS27A ZRT3 LST4 STE3 RPL17A RPS21A SRP40 PTR2 RPL40B MLP1 UBI4 FPS1 RPL8B RPS0B RPL22A BUD20 RPL10 CDC45 SEC10 RPS31 RPL37A HAP1 CTS1 RPS30A CDC25 RPS25B NUP2 VRP1 RPP0 RPL26A RPS29A BDF1 SFP1 YLR437C CAR2 RPS1A VMA6 RPL6B RPS17A YML025C RPS18B RPS1B TEM1 RPL6A RPM2 BUD22 ERG5 ADH3 ASC1 RPL13B RPS16A YMR144W RPL36A MRE11 RRP5 RPS10B PEP5 RPL20A ZRC1 SUN4 RPL9B FKH2 RPL16B RPS7B MEP2 YCK2 RPL42A RIA1 RPS3 RAP1 CAF40 RPS19B PEX6 RPP2A RPS15 GPD2 CVT19 ADH1 RPS19A RPL25 PFK27 NOB1 SGT1 RPS7A CRC1 RAS1 UBP2 RPL33B DFR1 RPS10A CPA1 RPL20B RPA43 RPA190 TYE7 VTS1 RPS12 SWI1 RPL21B RPS9A MOT1 RPS6A RPL5 RPL33A NAB3 RPL7B RPL1A ALG5 RPL36B APL4 RPL43A TEF1 RPL11A PRE2 COG4 RPC40 RPS23B SGV1            268      2921

cell [GO:0005623]       2.11892e-10    POP5 CDC19 CYC3 OAF1 RFT1 HAP3 PIM1 RPL19B SKT5 AST1 RPS8A RHK1 RPL23A RPL32 ROX3 RPS11B RPL19A AAC3 TEF2 FZO1 RPS6B NTC20 RPS9B RPL21A KCC4 AGP1 HIS4 SRO9 PMP1 RPS14A HMRA1 GPM2 GPD1 GPR1 PSA1 TSR1 RPS29B RPL31A RPL13A RPS16B RPP1B STF1 RPL41B RPL35B RPL41A RPL35A SSB1 RPS11A KRS1 ENA1 RSM10 RPS13 CCT6 PMP3 CFT1 SSF2 UTP4 YCG1 SHE9 SIZ1 RPL12B RPS17B ADA2 UTP6 RPS18A UGO1 RPL27B RPL37B GCN4 GEA2 HYP2 ANP1 RPL12A HAT2 ACA1 RPL34A RPS24A AST2 RPS8B SLX8 RPL23B RPS26B CCA1 RPH1 MDJ1 GAT1 FRS2 EPL1 RPL22B RPL2A RPL30 RPL24A RCS1 HSF1 MPS2 RPL7A GUP1 RPL28 SNF4 RPS2 RPL1B MRM2 GPI10 RPS26A RPS25A RPL26B MRP13 RPL11B RPS23A RPL24B NSR1 RNR4 TDH3 RTA1 RPS0A RAD2 TNA1 RPL14B RPS20 DUR3 RPL8A YHR009C RPL27A RPS27B YHR033W MSR1 HXT5 RPL42B CHS7 RPS4B MNL1 RPL2B RPL34B RPL16A RPL40A MLP2 RNR2 VPS53 SIP4 DPB11 MRS3 LCB3 RPS21B RPL17B RPL39 RPS22A RPS14B APS2 IME1 RPL43B RPS5 NMD5 RPS4A SFT1 RPL14A NFU1 MSN4 RPS27A ZRT3 LST4 STE3 RPL17A RPS21A SRP40 PTR2 RPL40B MLP1 UBI4 FPS1 RPL8B RPS0B RPL22A BUD20 RPL10 CDC45 SEC10 RPS31 RPL37A HAP1 CTS1 RPS30A CDC25 RPS25B NUP2 VRP1 RPP0 RPL26A RPS29A STE23 BDF1 SFP1 YLR437C CAR2 RPS1A VMA6 RPL6B RPS17A YML025C RPS18B RPS1B TEM1 RPL6A RPM2 SEC59 BUD22 ERG5 ADH3 ASC1 RPL13B RPS16A YMR144W RPL36A MRE11 RRP5 RPS10B PEP5 RPL20A ZRC1 SUN4 RPL9B FKH2 RPL16B RPS7B MEP2 YCK2 RPL42A RIA1 RPS3 RAP1 CAF40 RPS19B PEX6 RPP2A RPS15 GPD2 CVT19 ADH1 RPS19A RPL25 PFK27 NOB1 SGT1 RPS7A CRC1 RAS1 UBP2 RPL33B DFR1 RPS10A CPA1 RPL20B RPA43 RPA190 TYE7 VTS1 RPS12 SWI1 RPL21B RPS9A MOT1 RPS6A RPL5 RPL33A GUP2 NAB3 RPL7B RPL1A ALG5 RPL36B APL4 RPL43A TEF1 RPL11A PRE2 COG4 RPC40 RPS23B SGV1             278      3106

 

 

 

SMART Domains

Category          p-value In Category from Cluster          k          f

 

 

 

PFam-A Domains

Category          p-value In Category from Cluster          k          f

PF00467 (KOW)        6.17161e-09    RPL27B HYP2 RPL26B RPL14B RPL27A RPS4B RPS4A RPL14A RPL26A             9          12

 

 

 

Yeast Two Hybrid - Uetz

Category          p-value In Category from Cluster          k          f

 

 

 

Yeast Two Hybrid - Ito (core)

Category          p-value In Category from Cluster          k          f

 

 

 

Yeast Two Hybrid - Ito (full)

Category          p-value In Category from Cluster          k          f

 

 

 

Synthetic Genetic Array Analysis

Category          p-value In Category from Cluster          k          f

 

 

 

MDS Proteomics Complexes

Category          p-value In Category from Cluster          k          f

 

 

 

Cellzome Complexes

Category          p-value In Category from Cluster          k          f

YBR031W (RPL4A)   1e-14   RPL13A RPL12B RPL27B RPL7A RPL28 RPL11B RPL27A RPL2B RPS14B RPL17A RPL8B RPL10 RPP0 RPL6A RPL13B RPL20A RPL16B RPS3 RPL25 RPL20B RPL33A RPL7B RPL36B            23            39

 

 

 

Proteome Localization--Observed

Category          p-value In Category from Cluster          k          f

cyto      0.000729311   FUN19 CDC19 OAF1 RPL19B YBL029C-A RPS8A RPL19A TEF2 RPS6B AGP1 HIS4 PMP1 GPM2 GPD1 PSA1 RPL31A RPL13A SFA1 RPL41A PPH22 SSB1 KRS1 YDR186C PRO1 RPS17B RPS18A YEL007W GEA2 HYP2 UTR5 HAT2 ZRG8 YER034W AST2 RPL23B RPS26B YRF1-2 HSP12 FRS2 BUD27 RPL22B YFR017C RPL24A SNF4 RPS2 RPL1B RPS26A RPL26B RPL11B YGR117C RPS23A RPL24B TDH3 RPS20 RPL8A YHR009C YHR033W RPL34B RHR2 RPL16A YIR016W RNR2 YJL027C VPS53 YJL049W MRS3 RPS22A RPS5 HOM6 RPS4A SFT1 RPL14A RPS27A RPL17A UBI4 PDC1 RPL22A RPL10 RPS31 RPL37A YLR287C RPS30A VRP1 RPP0 RPL26A YLR437C CAR2 YLR460C ISF1 YMR099C ASC1 RPS16A YNL010W YNL011C RPL9B RPL16B RPS7B RIA1 RPS3 RPS15 MAM3 PHM7 ADH1 YOL109W RPL25 YGK3 PFK27 WHI2 VTS1 RPS9A RPL5 RPL7B YPL199C CSR2 PUF2 TEF1 RPL11A NAT3 RPS23B             119            1324

 

 

 

Proteome Localization--Predicted+Observed

Category          p-value In Category from Cluster          k          f

cyt        3.07756e-06    FUN19 CDC19 CYC3 OAF1 RPL19B YBL029W YBL060W SKT5 AST1 RPS8A RPL23A RPL32 ZTA1 YBR047W RPS11B AAC3 TKL2 TEF2 FZO1 DTR1 RPS6B RPS9B RPL21A AGP1 HIS4 SRO9 RPS14A GPM2 GPD1 GPR1 PSA1 TSR1 RPS29B RPL31A RXT3 RPL13A RPS16B RPP1B YDL133W RPL35B SFA1 UGX2 RPL41A YDL186W PPH22 RPL35A SSB1 RPS11A KRS1 ENA1 YDR042C YDR063W RPS13 YDR186C CCT6 PMP3 PRO1 SSF2 ADE8 RPL12B RPS17B UTP6 RPS18A UGO1 RPL27B RPL37B YDR541C YRF1-1 YEL007W GEA2 YEL023C HYP2 UTR5 RPL12A HAT2 YEL057C RMD6 YEL075C ZRG8 YER034W SPO73 RPS24A AST2 RPS8B SLX8 RPL23B RPS26B YER189W YRF1-2 HSP12 FRS2 BUD27 YFR017C RPL30 RPL24A RPL7A RPL28 RPS2 MON1 RPL1B HUL5 RPS26A COS12 RPS25A YGR033C RPL26B RPL11B YGR117C RPS23A RPL24B TDH3 RPS0A TNA1 RPL14B RPS20 DUR3 RPL8A YHL044W YHR009C RPL27A RPS27B YHR033W HXT5 YHR122W RPL42B CHS7 RPS4B MNL1 RPL2B RPL34B RHR2 YIL055C YIL121W RPL16A RPL40A YIR016W RNR2 YJL027C VPS53 YJL049W SIP4 MRS3 RPS21B RPL17B YJL178C RPL39 RPS22A RPS14B RPS5 NMD5 HOM6 RPS4A RPL14A RPS27A RPL17A RPS21A PTR2 RPL40B UBI4 FPS1 RPL8B PDC1 RPS0B RPL22A RPL10 RPS31 RPL37A YLR254C YLR287C RPS25B RPP0 RPL26A MDM30 YLR387C RPS29A STE23 YLR401C YLR437C CAR2 RPS1A VMA6 RPL6B YLR460C RPS17A RPS18B RPS1B RPL6A UFO1 ISF1 YMR099C MUB1 ASC1 RPL13B RPS16A RPL36A RPS10B PEP5 RPL20A YMR265C YNL010W YNL011C RPL9B RPL16B RPS7B YNL101W MEP2 YNL144C YCK2 RPL42A RIA1 RPS3 PSY2 CAF40 RPS19B PEX6 YRF1-6 PDR18 RPP2A RPS15 ADH1 YOL109W RPS19A RPL25 YGK3 PFK27 WHI2 SGT1 RKI1 RPS7A CRC1 UBP2 YOR161C YOR179C RPL33B DFR1 YOR292C RPS10A CPA1 RPL20B YOR342C TYE7 VTS1 SCP1 RPS12 YPL017C RPL21B RPS9A RPS6A YPL095C RPL5 RPL33A KES1 YPL162C RPL7B YPL199C RPL1A NEW1 CSR2 PUF2 RPL43A TEF1 RPL11A PRE2 COG4 DBF20 NAT3 RPS23B YPR202W       268      3210

 

 

 

Deletions Consortium (Essentiality, Morphology)

Category          p-value In Category from Cluster          k          f

Morphology - Clumpy  0.00445735     PIM1 ROX3 SRO9 ANP1 GUP1 CTS1 VRP1           7          31

 

 

 

Yeast Fitness Data

Category          p-value In Category from Cluster          k          f

Slow Growers  1.43934e-05    RPL19B ROX3 RPS11B RPL19A FZO1 RPS6B RPS9B RPL21A RPS29B RPL31A RPL35A RPS11A PMP3 PRO1 RPL12B RPS18A ANP1 RPL34A RPS24A SLX8 RPL23B MDJ1 BUD27 RCS1 RPL7A GUP1 SNF4 RPL1B RPS23A NSR1 RNR4 RPL27A RPS27B RPS4B VPS53 RPS21B RPL39 RPS4A RPL14A SRP40 PDC1 YLR047C RPL22A BUD20 RPL37A VRP1 BDF1 SFP1 VMA6 RPL6B RPS17A RPS1B RPL6A BUD22 ASC1 RPL13B RPS16A MRE11 RSN1 RPL16B RPS19B ADH1 RPS19A RPS7A RPS10A YPL017C RPS6A RPL43A NAT3 RPS23B   70        617

 

 

 

Published Complexes

Category          p-value In Category from Cluster          k          f

Andersen et al. (2002) - Curr Bio 12:1-            1.76238e-11    RPS6B RPS9B RPL31A RPS11A RPS13 RPL12B RPL27B HYP2 RPS8B RPL7A RPL28 RPL1B RPL26B RPL11B RPS0A RPL14B RPL2B RPL16A RPS5 RPS4A RPL17A SRP40 UBI4 RPL8B RPL22A RPP0 RPL6B RPS18B RPS1B RPL13B RPS16A RRP5 RPL9B RPL25 RPA190 RPS12 RPL5 RPC40            38        165

Harnicharnpai et al. (2001) - Mol Cell 8:505-   0.00181237     SSB1 RPS2 TDH3 RPS22A RPL10 RPS3 RPS15 RPL5             8          34


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Rap1-LeeORLiebChIP-2SD.FunSpec.txt

 Input Cluster (n=260)

YAL033W       POP5

YAL034C        FUN19

YBL022C        PIM1

YBL027W       RPL19B

YBL028C

YBL029C-A

YBL029W

YBL060W

YBL061C        SKT5

YBL069W       AST1

YBL071W-A   KTI11

YBL072C        RPS8A

YBL081W

YBL082C        RHK1

YBL092W       RPL32

YBL093C        ROX3

YBR048W       RPS11B

YBR117C        TKL2

YBR118W       TEF2

YBR179C        FZO1

YBR180W       DTR1

YBR181C        RPS6B

YBR188C        NTC20

YBR189W       RPS9B

YCL024W       KCC4

YCL025C        AGP1

YCL030C        HIS4

YCL036W       GFD2

YCL037C        SRO9

YDL022W       GPD1

YDL060W       TSR1

YDL061C        RPS29B

YDL075W       RPL31A

YDL076C        RXT3

YDL082W       RPL13A

YDL083C        RPS16B

YDL130W       RPP1B

YDL133C-A   RPL41B

YDL133W

YDL136W       RPL35B

YDL184C        RPL41A

YDL186W

YDL188C        PPH22

YDL191W       RPL35A

YDL229W       SSB1

YDR036C

YDR037W      KRS1

YDR042C

YDR186C

YDR188W      CCT6

YDR276C       PMP3

YDR300C       PRO1

YDR301W      CFT1

YDR393W      SHE9

YDR408C       ADE8

YDR409W      SIZ1

YDR418W      RPL12B

YDR447C       RPS17B

YDR448W      ADA2

YDR449C       UTP6

YDR450W      RPS18A

YDR470C       UGO1

YDR471W      RPL27B

YDR500C       RPL37B

YDR501W      PLM2

YEL007W

YEL009C        GCN4

YEL022W       GEA2

YEL023C

YEL054C        RPL12A

YEL056W       HAT2

YEL057C

YER033C        ZRG8

YER034W

YER056C-A    RPL34A

YER074W       RPS24A

YER101C        AST2

YER102W       RPS8B

YER116C        SLX8

YER117W       RPL23B

YER168C        CCA1

YER169W       RPH1

YFL023W       BUD27

YFL024C        EPL1

YFR017C

YFR031C-A    RPL2A

YGL030W       RPL30

YGL031C        RPL24A

YGL073W       HSF1

YGL075C        MPS2

YGL076C        RPL7A

YGL083W       SCY1

YGL084C        GUP1

YGL103W       RPL28

YGL104C        VPS73

YGL115W       SNF4

YGL123W       RPS2

YGL124C        MON1

YGL189C        RPS26A

YGR027C       RPS25A

YGR033C

YGR034W      RPL26B

YGR085C       RPL11B

YGR117C

YGR118W      RPS23A

YGR148C       RPL24B

YGR149W

YGR159C       NSR1

YGR192C       TDH3

YGR258C       RAD2

YGR260W      TNA1

YHL001W       RPL14B

YHL015W       RPS20

YHL016C        DUR3

YHL033C        RPL8A

YHR009C

YHR010W      RPL27A

YHR021C       RPS27B

YHR021W-A  ECM12

YHR033W

YHR096C       HXT5

YHR122W

YHR141C       RPL42B

YHR142W      CHS7

YHR203C       RPS4B

YHR204W      MNL1

YIL018W        RPL2B

YIL052C         RPL34B

YIL053W        RHR2

YIL055C

YIL148W        RPL40A

YIL149C         MLP2

YJL049W

YJL089W        SIP4

YJL090C         DPB11

YJL133W        MRS3

YJL134W        LCB3

YJL136C         RPS21B

YJL177W        RPL17B

YJL178C

YJL189W        RPL39

YJL190C         RPS22A

YJL191W        RPS14B

YJL192C

YJR058C         APS2

YJR059W        PTK2

YJR094C         IME1

YJR094W-A   RPL43B

YJR123W        RPS5

YJR139C         HOM6

YKL006C-A   SFT1

YKL006W      RPL14A

YKL156W      RPS27A

YKL178C       STE3

YKL180W      RPL17A

YKR057W      RPS21A

YKR094C       RPL40B

YKR095W      MLP1

YLL039C        UBI4

YLR044C        PDC1

YLR047C

YLR048W       RPS0B

YLR061W       RPL22A

YLR074C        BUD20

YLR075W       RPL10

YLR286C        CTS1

YLR333C        RPS25B

YLR387C

YLR388W       RPS29A

YLR390W-A   CCW14

YLR399C        BDF1

YLR437C

YLR438W       CAR2

YLR447C        VMA6

YLR448W       RPL6B

YML024W      RPS17A

YML025C

YML026C       RPS18B

YML073C       RPL6A

YMR013C       SEC59

YMR013W-A

YMR014W      BUD22

YMR015C       ERG5

YMR099C

YMR100W      MUB1

YMR116C       ASC1

YMR142C       RPL13B

YMR143W      RPS16A

YMR144W

YMR194W      RPL36A

YMR229C       RRP5

YMR230W      RPS10B

YMR231W      PEP5

YMR242C       RPL20A

YMR243C       ZRC1

YMR244W

YNL010W

YNL011C

YNL069C       RPL16B

YNL101W

YNL154C       YCK2

YNL162W      RPL42A

YNL162W-A

YNL163C       RIA1

YNL178W      RPS3

YNL180C       RHO5

YNL190W

YNL216W      RAP1

YNL253W

YNL254C

YNL302C       RPS19B

YOL039W      RPP2A

YOL040C       RPS15

YOL059W      GPD2

YOL060C       MAM3

YOL109W

YOL121C       RPS19A

YOL127W      RPL25

YOL128C       YGK3

YOL136C       PFK27

YOR043W      WHI2

YOR056C       NOB1

YOR057W      SGT1

YOR095C       RKI1

YOR096W      RPS7A

YOR100C       CRC1

YOR101W      RAS1

YOR124C       UBP2

YOR292C

YOR293W      RPS10A

YOR312C       RPL20B

YOR338W

YOR340C       RPA43

YOR341W      RPA190

YOR344C       TYE7

YOR365C

YOR367W      SCP1

YOR369C       RPS12

YPL081W       RPS9A

YPL082C        MOT1

YPL090C        RPS6A

YPL131W       RPL5

YPL143W       RPL33A

YPL144W

YPL145C        KES1

YPL189W       GUP2

YPL190C        NAB3

YPL198W       RPL7B

YPL199C

YPL220W       RPL1A

YPL226W       NEW1

YPL227C        ALG5

YPR080W       TEF1

YPR102C        RPL11A

YPR103W       PRE2

YPR105C        COG4

YPR106W       ISR1

YPR110C        RPC40

YPR111W       DBF20

YPR161C        SGV1

 

Genes Not Found:

 

SNR17B

SNR34

SNR39B

SNR47

SNR62

SNR72

SNR73

SNR74

SNR75

SNR76

SNR77

SNR78

TE%28UUC%29L

TP%28UGG%29O3

YBL071C-B

YGL188C-A

YGR027W-A

YGR027W-B

YHL015W-A

YJL133C-A

YLR264C-A

YMR230W-A

YMR242W-A

YPL189C-A

MIPS Functional Classification

Category          p-value In Category from Cluster          k          f

ribosome biogenesis      1e-14   RPL19B RPS8A RPL32 RPS11B RPS6B RPS9B RPS29B RPL31A RPL13A RPS16B RPP1B RPL41B RPL35B RPL41A RPL35A RPL12B RPS17B RPS18A RPL27B RPL37B RPL12A RPL34A RPS24A RPS8B RPL23B RPL2A RPL30 RPL24A RPL7A RPL28 RPS2 RPS26A RPS25A RPL26B RPL11B RPS23A RPL24B RPL14B RPS20 RPL8A RPL27A RPS27B RPL42B RPS4B RPL2B RPL34B RPL40A RPS21B RPL17B RPL39 RPS22A RPS14B RPL43B RPS5 RPL14A RPS27A RPL17A RPS21A RPL40B RPS0B RPL22A RPL10 RPS25B RPS29A RPL6B RPS17A YML025C RPS18B RPL6A ASC1 RPL13B RPS16A RPL36A RPS10B RPL20A RPL16B RPL42A RPS3 RPS19B RPP2A RPS15 RPS19A RPL25 RPS7A RPS10A RPL20B RPS12 RPS9A RPS6A RPL5 RPL33A RPL7B RPL1A RPL11A        94        215

PROTEIN SYNTHESIS          1.34337e-14    RPL19B RPS8A RPL32 RPS11B TEF2 RPS6B RPS9B RPS29B RPL31A RPL13A RPS16B RPP1B RPL41B RPL35B RPL41A RPL35A SSB1 KRS1 RPL12B RPS17B RPS18A RPL27B RPL37B RPL12A RPL34A RPS24A RPS8B RPL23B RPL2A RPL30 RPL24A RPL7A RPL28 RPS2 RPS26A RPS25A RPL26B RPL11B RPS23A RPL24B RPL14B RPS20 RPL8A RPL27A RPS27B RPL42B RPS4B RPL2B RPL34B RPL40A RPS21B RPL17B RPL39 RPS22A RPS14B RPL43B RPS5 RPL14A RPS27A RPL17A RPS21A RPL40B UBI4 RPS0B RPL22A RPL10 RPS25B RPS29A RPL6B RPS17A YML025C RPS18B RPL6A ASC1 RPL13B RPS16A RPL36A RPS10B RPL20A RPL16B RPL42A RIA1 RPS3 RAP1 RPS19B RPP2A RPS15 RPS19A RPL25 RPS7A RPS10A RPL20B RPS12 RPS9A RPS6A RPL5 RPL33A RPL7B RPL1A NEW1 TEF1 RPL11A          102      359

cytoplasm         4.13003e-14    RPL19B RPS8A RPL32 RPS11B TKL2 TEF2 RPS6B RPS9B GPD1 RPS29B RPL31A RPL13A RPS16B RPP1B RPL41B RPL35B RPL41A RPL35A SSB1 KRS1 CCT6 PRO1 ADE8 RPL12B RPS17B RPS18A RPL27B RPL37B RPL12A HAT2 RPL34A RPS24A RPS8B RPL23B CCA1 RPL30 RPL24A RPL7A RPL28 RPS2 RPS26A RPS25A RPL26B RPL11B RPS23A RPL24B TDH3 RPL14B RPS20 RPL8A RPL27A RPS27B RPL42B RPS4B RPL2B RPL34B RPL40A RPS21B RPL17B RPL39 RPS22A RPS14B RPL43B RPS5 RPL14A RPS27A RPL17A RPS21A RPL40B UBI4 PDC1 RPS0B RPL10 RPS25B RPS29A CAR2 RPL6B RPS17A RPS18B RPL6A ASC1 RPL13B RPS16A RPL36A RPS10B RPL20A RPL16B RPL42A RPS3 RPS19B RPP2A RPS15 RPS19A RPL25 RKI1 RPS7A RAS1 UBP2 RPS10A RPL20B RPS12 RPS9A RPS6A RPL5 RPL33A KES1 RPL7B RPL1A TEF1 RPL11A           110      554

SUBCELLULAR LOCALISATION   1.06359e-13    POP5 PIM1 RPL19B RPS8A RHK1 RPL32 ROX3 RPS11B TKL2 TEF2 FZO1 RPS6B RPS9B KCC4 AGP1 GPD1 RPS29B RPL31A RPL13A RPS16B RPP1B RPL41B RPL35B RPL41A RPL35A SSB1 KRS1 CCT6 PRO1 CFT1 ADE8 RPL12B RPS17B ADA2 RPS18A RPL27B RPL37B GCN4 GEA2 RPL12A HAT2 RPL34A RPS24A RPS8B RPL23B CCA1 RPL30 RPL24A HSF1 MPS2 RPL7A RPL28 SNF4 RPS2 RPS26A RPS25A RPL26B RPL11B RPS23A RPL24B NSR1 TDH3 RAD2 RPL14B RPS20 DUR3 RPL8A RPL27A RPS27B HXT5 RPL42B CHS7 RPS4B RPL2B RPL34B RPL40A MLP2 SIP4 DPB11 MRS3 RPS21B RPL17B RPL39 RPS22A RPS14B APS2 IME1 RPL43B RPS5 SFT1 RPL14A RPS27A STE3 RPL17A RPS21A RPL40B MLP1 UBI4 PDC1 RPS0B RPL10 CTS1 RPS25B RPS29A BDF1 CAR2 VMA6 RPL6B RPS17A YML025C RPS18B RPL6A SEC59 ERG5 ASC1 RPL13B RPS16A RPL36A RRP5 RPS10B PEP5 RPL20A ZRC1 RPL16B YCK2 RPL42A RPS3 RAP1 RPS19B RPP2A RPS15 GPD2 RPS19A RPL25 RKI1 RPS7A RAS1 UBP2 RPS10A RPL20B RPA43 RPA190 TYE7 RPS12 RPS9A MOT1 RPS6A RPL5 RPL33A KES1 NAB3 RPL7B RPL1A ALG5 TEF1 RPL11A PRE2 RPC40   158      2256

 

 

 

MIPS Phenotypes

Category          p-value In Category from Cluster          k          f

 

 

 

MIPS Subcellular Localization

Category          p-value In Category from Cluster          k          f

cytoplasm         4.56302e-14    RPL19B RPS8A RPL32 RPS11B TKL2 TEF2 RPS6B RPS9B SRO9 GPD1 RPS29B RPL31A RPL13A RPS16B RPP1B RPL41B RPL35B RPL41A RPL35A SSB1 KRS1 CCT6 PRO1 ADE8 RPL12B RPS17B RPS18A RPL27B RPL37B RPL12A HAT2 RPL34A RPS24A RPS8B RPL23B CCA1 RPL30 RPL24A RPL7A RPL28 RPS2 RPS26A RPS25A RPL26B RPL11B RPS23A RPL24B TDH3 RPL14B RPS20 RPL8A RPL27A RPS27B RPL42B RPS4B RPL2B RPL34B RPL40A RPS21B RPL17B RPL39 RPS22A RPS14B RPL43B RPS5 RPL14A RPS27A RPL17A RPS21A RPL40B UBI4 PDC1 RPS0B RPL22A RPL10 RPS25B RPS29A CAR2 RPL6B RPS17A RPS18B RPL6A ASC1 RPL13B RPS16A RPL36A RPS10B RPL20A RPL16B RPL42A RPS3 RPS19B RPP2A RPS15 RPS19A RPL25 RKI1 RPS7A UBP2 RPS10A RPL20B RPS12 RPS9A RPS6A RPL5 RPL33A KES1 RPL7B RPL1A TEF1 RPL11A           111      593

 

 

 

MIPS Protein Complexes

Category          p-value In Category from Cluster          k          f

cytoplasmic ribosomal small subunit       1e-14   RPS8A RPS11B RPS6B RPS9B RPS29B RPS16B RPS17B RPS18A RPS24A RPS8B RPS2 RPS26A RPS25A RPS23A RPS20 RPS27B RPS4B RPS21B RPS22A RPS14B RPS5 RPS27A RPS21A RPS0B RPS25B RPS29A RPS17A RPS18B ASC1 RPS16A RPS10B RPS3 RPS19B RPS15 RPS19A RPS7A RPS10A RPS12 RPS9A RPS6A     40        57

Cytoplasmic ribosomes 1e-14   RPL19B RPS8A RPL32 RPS11B RPS6B RPS9B RPS29B RPL31A RPL13A RPS16B RPP1B RPL41B RPL35B RPL41A RPL35A RPL12B RPS17B RPS18A RPL27B RPL37B RPL12A RPL34A RPS24A RPS8B RPL23B RPL2A RPL30 RPL24A RPL7A RPL28 RPS2 RPS26A RPS25A RPL26B RPL11B RPS23A RPL24B RPL14B RPS20 RPL8A RPL27A RPS27B RPL42B RPS4B RPL2B RPL34B RPL40A RPS21B RPL17B RPL39 RPS22A RPS14B RPL43B RPS5 RPL14A RPS27A RPL17A RPS21A RPL40B RPS0B RPL22A RPL10 RPS25B RPS29A RPL6B RPS17A RPS18B RPL6A ASC1 RPL13B RPS16A RPL36A RPS10B RPL20A RPL16B RPL42A RPS3 RPS19B RPP2A RPS15 RPS19A RPL25 RPS7A RPS10A RPL20B RPS12 RPS9A RPS6A RPL5 RPL33A RPL7B RPL1A RPL11A      93        138

cytoplasmic ribosomal large subunit       1e-14   RPL19B RPL32 RPL31A RPL13A RPP1B RPL41B RPL35B RPL41A RPL35A RPL12B RPL27B RPL37B RPL12A RPL34A RPL23B RPL2A RPL30 RPL24A RPL7A RPL28 RPL26B RPL11B RPL24B RPL14B RPL8A RPL27A RPL42B RPL2B RPL34B RPL40A RPL17B RPL39 RPL43B RPL14A RPL17A RPL40B RPL22A RPL10 RPL6B RPL6A RPL13B RPL36A RPL20A RPL16B RPL42A RPP2A RPL25 RPL20B RPL5 RPL33A RPL7B RPL1A RPL11A      53        81

Translation complexes   1e-14   RPL19B RPS8A RPL32 RPS11B TEF2 RPS6B RPS9B RPS29B RPL31A RPL13A RPS16B RPP1B RPL41B RPL35B RPL41A RPL35A RPL12B RPS17B RPS18A RPL27B RPL37B RPL12A RPL34A RPS24A RPS8B RPL23B RPL2A RPL30 RPL24A RPL7A RPL28 RPS2 RPS26A RPS25A RPL26B RPL11B RPS23A RPL24B RPL14B RPS20 RPL8A RPL27A RPS27B RPL42B RPS4B RPL2B RPL34B RPL40A RPS21B RPL17B RPL39 RPS22A RPS14B RPL43B RPS5 RPL14A RPS27A RPL17A RPS21A RPL40B RPS0B RPL22A RPL10 RPS25B RPS29A RPL6B RPS17A RPS18B RPL6A ASC1 RPL13B RPS16A RPL36A RPS10B RPL20A RPL16B RPL42A RPS3 RPS19B RPP2A RPS15 RPS19A RPL25 RPS7A RPS10A RPL20B RPS12 RPS9A RPS6A RPL5 RPL33A RPL7B RPL1A TEF1 RPL11A           95        240

 

 

 

MIPS Protein Classes

Category          p-value In Category from Cluster          k          f

 

 

 

GO Molecular Function

Category          p-value In Category from Cluster          k          f

structural constituent of ribosome [GO:0003735]          1e-14   RPL19B RPS8A RPL32 RPS11B RPS6B RPS9B RPS29B RPL31A RPL13A RPS16B RPP1B RPL41B RPL35B RPL41A RPL35A RPL12B RPS17B RPS18A RPL27B RPL37B RPL12A RPL34A RPS24A RPS8B RPL23B RPL2A RPL30 RPL24A RPL7A RPL28 RPS2 RPS26A RPS25A RPL26B RPL11B RPS23A RPL24B RPL14B RPS20 RPL8A RPL27A RPS27B RPL42B RPS4B RPL2B RPL34B RPL40A RPS21B RPL17B RPL39 RPS22A RPS14B RPL43B RPS5 RPL14A RPS27A RPL17A RPS21A RPL40B RPS0B RPL22A RPL10 RPS25B RPS29A RPL6B RPS17A YML025C RPS18B RPL6A RPL13B RPS16A RPL36A RPS10B RPL20A RPL16B RPL42A RPS3 RPS19B RPP2A RPS15 RPS19A RPL25 RPS7A RPS10A RPL20B RPS12 RPS9A RPS6A RPL5 RPL33A RPL7B RPL1A RPL11A    93        206

structural molecule [GO:0005198]        1e-14   RPL19B RPS8A RPL32 RPS11B RPS6B RPS9B RPS29B RPL31A RPL13A RPS16B RPP1B RPL41B RPL35B RPL41A RPL35A RPL12B RPS17B RPS18A RPL27B RPL37B RPL12A RPL34A RPS24A RPS8B RPL23B RPL2A RPL30 RPL24A MPS2 RPL7A RPL28 RPS2 RPS26A RPS25A RPL26B RPL11B RPS23A RPL24B RPL14B RPS20 RPL8A RPL27A RPS27B RPL42B RPS4B RPL2B RPL34B RPL40A RPS21B RPL17B RPL39 RPS22A RPS14B RPL43B RPS5 RPL14A RPS27A RPL17A RPS21A RPL40B RPS0B RPL22A RPL10 RPS25B RPS29A CCW14 RPL6B RPS17A YML025C RPS18B RPL6A RPL13B RPS16A RPL36A RPS10B RPL20A RPL16B RPL42A RPS3 RPS19B RPP2A RPS15 RPS19A RPL25 RPS7A RPS10A RPL20B RPS12 RPS9A RPS6A RPL5 RPL33A RPL7B RPL1A RPL11A       95        310

 

 

 

GO Biological Process

Category          p-value In Category from Cluster          k          f

metabolism [GO:0008152]       1e-14   POP5 PIM1 RPL19B SKT5 AST1 RPS8A RHK1 RPL32 ROX3 RPS11B TKL2 TEF2 RPS6B NTC20 RPS9B KCC4 HIS4 SRO9 RPS29B RPL31A RPL13A RPS16B RPP1B RPL41B RPL35B RPL41A PPH22 RPL35A SSB1 KRS1 CCT6 PRO1 CFT1 ADE8 SIZ1 RPL12B RPS17B ADA2 UTP6 RPS18A RPL27B RPL37B GCN4 GEA2 RPL12A HAT2 RPL34A RPS24A RPS8B SLX8 RPL23B CCA1 RPH1 EPL1 RPL2A RPL30 RPL24A RPL7A GUP1 RPL28 VPS73 SNF4 RPS2 MON1 RPS26A RPS25A RPL26B RPL11B RPS23A RPL24B NSR1 TDH3 RAD2 RPL14B RPS20 RPL8A RPL27A RPS27B RPL42B CHS7 RPS4B MNL1 RPL2B RPL34B RHR2 RPL40A MLP2 SIP4 DPB11 MRS3 LCB3 RPS21B RPL17B RPL39 RPS22A RPS14B RPL43B RPS5 HOM6 SFT1 RPL14A RPS27A RPL17A RPS21A RPL40B MLP1 UBI4 PDC1 RPS0B RPL22A RPL10 RPS25B RPS29A CAR2 RPL6B RPS17A YML025C RPS18B RPL6A SEC59 ERG5 RPL13B RPS16A RPL36A RRP5 RPS10B PEP5 RPL20A ZRC1 RPL16B YCK2 RPL42A RPS3 RAP1 RPS19B RPP2A RPS15 GPD2 RPS19A RPL25 YGK3 PFK27 NOB1 RKI1 RPS7A CRC1 UBP2 RPS10A RPL20B RPA43 RPA190 TYE7 RPS12 RPS9A MOT1 RPS6A RPL5 RPL33A KES1 NAB3 RPL7B RPL1A ALG5 TEF1 RPL11A PRE2 COG4 RPC40 DBF20 SGV1 170      2693

protein biosynthesis [GO:0006412]       1.28786e-14    RPL19B RPS8A RHK1 RPL32 RPS11B TEF2 RPS6B RPS9B SRO9 RPS29B RPL31A RPL13A RPS16B RPP1B RPL41B RPL35B RPL41A PPH22 RPL35A SSB1 KRS1 RPL12B RPS17B RPS18A RPL27B RPL37B RPL12A RPL34A RPS24A RPS8B RPL23B CCA1 RPL2A RPL30 RPL24A RPL7A RPL28 RPS2 RPS26A RPS25A RPL26B RPL11B RPS23A RPL24B RPL14B RPS20 RPL8A RPL27A RPS27B RPL42B RPS4B RPL2B RPL34B RPL40A RPS21B RPL17B RPL39 RPS22A RPS14B RPL43B RPS5 RPL14A RPS27A RPL17A RPS21A RPL40B RPS0B RPL22A RPL10 RPS25B RPS29A RPL6B RPS17A YML025C RPS18B RPL6A SEC59 RPL13B RPS16A RPL36A RPS10B RPL20A RPL16B RPL42A RPS3 RPS19B RPP2A RPS15 RPS19A RPL25 RPS7A RPS10A RPL20B RPS12 RPS9A RPS6A RPL5 RPL33A RPL7B RPL1A ALG5 TEF1 RPL11A             103      415

macromolecule biosynthesis [GO:0009059]      1.9762e-14      RPL19B SKT5 RPS8A RHK1 RPL32 RPS11B TEF2 RPS6B RPS9B SRO9 RPS29B RPL31A RPL13A RPS16B RPP1B RPL41B RPL35B RPL41A PPH22 RPL35A SSB1 KRS1 RPL12B RPS17B RPS18A RPL27B RPL37B RPL12A RPL34A RPS24A RPS8B RPL23B CCA1 RPL2A RPL30 RPL24A RPL7A RPL28 RPS2 RPS26A RPS25A RPL26B RPL11B RPS23A RPL24B RPL14B RPS20 RPL8A RPL27A RPS27B RPL42B CHS7 RPS4B RPL2B RPL34B RPL40A RPS21B RPL17B RPL39 RPS22A RPS14B RPL43B RPS5 RPL14A RPS27A RPL17A RPS21A RPL40B RPS0B RPL22A RPL10 RPS25B RPS29A RPL6B RPS17A YML025C RPS18B RPL6A SEC59 RPL13B RPS16A RPL36A RPS10B RPL20A RPL16B RPL42A RPS3 RPS19B RPP2A RPS15 RPS19A RPL25 RPS7A RPS10A RPL20B RPS12 RPS9A RPS6A RPL5 RPL33A RPL7B RPL1A ALG5 TEF1 RPL11A             105      422

biosynthesis [GO:0009058]      5.52891e-14    RPL19B SKT5 RPS8A RHK1 RPL32 RPS11B TEF2 RPS6B RPS9B HIS4 SRO9 RPS29B RPL31A RPL13A RPS16B RPP1B RPL41B RPL35B RPL41A PPH22 RPL35A SSB1 KRS1 PRO1 ADE8 RPL12B RPS17B RPS18A RPL27B RPL37B GCN4 RPL12A RPL34A RPS24A RPS8B RPL23B CCA1 RPL2A RPL30 RPL24A RPL7A RPL28 RPS2 RPS26A RPS25A RPL26B RPL11B RPS23A RPL24B TDH3 RPL14B RPS20 RPL8A RPL27A RPS27B RPL42B CHS7 RPS4B RPL2B RPL34B RHR2 RPL40A SIP4 LCB3 RPS21B RPL17B RPL39 RPS22A RPS14B RPL43B RPS5 RPL14A RPS27A RPL17A RPS21A RPL40B RPS0B RPL22A RPL10 RPS25B RPS29A RPL6B RPS17A YML025C RPS18B RPL6A SEC59 ERG5 RPL13B RPS16A RPL36A RPS10B RPL20A RPL16B RPL42A RPS3 RPS19B RPP2A RPS15 RPS19A RPL25 RPS7A RPS10A RPL20B RPS12 RPS9A RPS6A RPL5 RPL33A KES1 RPL7B RPL1A ALG5 TEF1 RPL11A         115      731

protein metabolism [GO:0019538]        7.13873e-14    PIM1 RPL19B AST1 RPS8A RHK1 RPL32 RPS11B TEF2 RPS6B RPS9B KCC4 SRO9 RPS29B RPL31A RPL13A RPS16B RPP1B RPL41B RPL35B RPL41A PPH22 RPL35A SSB1 KRS1 CCT6 SIZ1 RPL12B RPS17B ADA2 RPS18A RPL27B RPL37B GEA2 RPL12A RPL34A RPS24A RPS8B RPL23B CCA1 EPL1 RPL2A RPL30 RPL24A RPL7A RPL28 VPS73 RPS2 MON1 RPS26A RPS25A RPL26B RPL11B RPS23A RPL24B RPL14B RPS20 RPL8A RPL27A RPS27B RPL42B CHS7 RPS4B MNL1 RPL2B RPL34B RPL40A MLP2 RPS21B RPL17B RPL39 RPS22A RPS14B RPL43B RPS5 SFT1 RPL14A RPS27A RPL17A RPS21A RPL40B MLP1 UBI4 RPS0B RPL22A RPL10 RPS25B RPS29A RPL6B RPS17A YML025C RPS18B RPL6A SEC59 RPL13B RPS16A RPL36A RPS10B PEP5 RPL20A RPL16B YCK2 RPL42A RPS3 RPS19B RPP2A RPS15 RPS19A RPL25 YGK3 NOB1 RPS7A UBP2 RPS10A RPL20B RPS12 RPS9A RPS6A RPL5 RPL33A RPL7B RPL1A ALG5 TEF1 RPL11A PRE2 COG4 DBF20 SGV1 128      1168

cell growth and/or maintenance [GO:0008151] 1.67061e-11    POP5 PIM1 RPL19B SKT5 AST1 KTI11 RPS8A RHK1 RPL32 ROX3 RPS11B TKL2 TEF2 FZO1 RPS6B NTC20 RPS9B KCC4 AGP1 HIS4 SRO9 GPD1 TSR1 RPS29B RPL31A RPL13A RPS16B RPP1B RPL41B RPL35B RPL41A PPH22 RPL35A SSB1 YDR036C KRS1 CCT6 PMP3 PRO1 CFT1 SHE9 ADE8 SIZ1 RPL12B RPS17B ADA2 UTP6 RPS18A UGO1 RPL27B RPL37B GCN4 GEA2 RPL12A HAT2 RPL34A RPS24A RPS8B SLX8 RPL23B CCA1 RPH1 BUD27 EPL1 RPL2A RPL30 RPL24A HSF1 MPS2 RPL7A GUP1 RPL28 VPS73 SNF4 RPS2 MON1 RPS26A RPS25A RPL26B RPL11B RPS23A RPL24B NSR1 TDH3 RAD2 TNA1 RPL14B RPS20 DUR3 RPL8A RPL27A RPS27B ECM12 HXT5 RPL42B CHS7 RPS4B MNL1 RPL2B RPL34B RHR2 RPL40A MLP2 SIP4 DPB11 MRS3 LCB3 RPS21B RPL17B RPL39 RPS22A RPS14B APS2 PTK2 IME1 RPL43B RPS5 HOM6 SFT1 RPL14A RPS27A STE3 RPL17A RPS21A RPL40B MLP1 UBI4 PDC1 RPS0B RPL22A BUD20 RPL10 CTS1 RPS25B RPS29A CCW14 BDF1 CAR2 VMA6 RPL6B RPS17A YML025C RPS18B RPL6A SEC59 BUD22 ERG5 MUB1 RPL13B RPS16A RPL36A RRP5 RPS10B PEP5 RPL20A ZRC1 RPL16B YCK2 RPL42A RIA1 RPS3 RAP1 RPS19B RPP2A RPS15 GPD2 MAM3 RPS19A RPL25 YGK3 PFK27 WHI2 NOB1 SGT1 RKI1 RPS7A CRC1 RAS1 UBP2 RPS10A RPL20B RPA43 RPA190 TYE7 RPS12 RPS9A MOT1 RPS6A RPL5 RPL33A KES1 NAB3 RPL7B RPL1A ALG5 TEF1 RPL11A PRE2 COG4 RPC40 DBF20 SGV1 202      3657

ribosomal subunit assembly [GO:0042257]       3.33601e-11    RPS11B RPL12B RPS17B RPL12A RPL11B NSR1 RPS14B RPS0B RPL10 RPL6B RPS17A YML025C RPL6A RPL25 RPL5 RPL11A           16        48

ribosome assembly [GO:0042255]       6.75903e-11    RPS11B RPL12B RPS17B RPL12A RPL11B NSR1 RPS14B RPS0B RPL10 RPL6B RPS17A YML025C RPL6A RPL25 RPL5 RPL11A 16        50

ribosomal large subunit assembly and maintenance [GO:0000027]         9.31467e-07    RPL12B RPL12A RPL11B RPL10 RPL6B YML025C RPL6A RPL25 RPL5 RPL11A     10        35

ribosome biogenesis and assembly [GO:0042254]        9.84244e-07    POP5 RPS11B TSR1 RPL12B RPS17B UTP6 RPL12A RPL30 RPL11B NSR1 RPS14B RPS0B RPL10 RPL6B RPS17A YML025C RPL6A RRP5 RIA1 RPL25 RPL5 RPL11A            22        165

regulation of translational fidelity [GO:0006450]            2.32116e-06    RPS11B RPS9B RPS2 RPS23A RPS9A         5            7

ribosomal small subunit assembly and maintenance [GO:0000028]         6.46271e-06    RPS11B RPS17B NSR1 RPS14B RPS0B RPS17A          6          13

 

 

 

GO Cellular Component

Category          p-value In Category from Cluster          k          f

cytosolic small ribosomal subunit (sensu Eukarya) [GO:0005843]          1e-14   RPS8A RPS11B RPS6B RPS9B RPS29B RPS16B RPS17B RPS18A RPS24A RPS8B RPS2 RPS26A RPS25A RPS23A RPS20 RPS27B RPS4B RPS21B RPS22A RPS14B RPS5 RPS27A RPS21A RPS0B RPS25B RPS29A RPS17A RPS18B RPS16A RPS10B RPS3 RPS19B RPS15 RPS19A RPS7A RPS10A RPS12 RPS9A RPS6A   39        61

eukaryotic 48S initiation complex [GO:0016283]          1e-14   RPS8A RPS11B RPS6B RPS9B RPS29B RPS16B RPS17B RPS18A RPS24A RPS8B RPS2 RPS26A RPS25A RPS23A RPS20 RPS27B RPS4B RPS21B RPS22A RPS14B RPS5 RPS27A RPS21A RPS0B RPS25B RPS29A RPS17A RPS18B RPS16A RPS10B RPS3 RPS19B RPS15 RPS19A RPS7A RPS10A RPS12 RPS9A RPS6A     39        61

cytosolic large ribosomal subunit (sensu Eukarya) [GO:0005842]          1e-14   RPL19B RPL32 RPL31A RPL13A RPP1B RPL41B RPL35B RPL41A RPL35A RPL12B RPL27B RPL37B RPL12A RPL34A RPL23B RPL2A RPL30 RPL24A RPL7A RPL28 RPL26B RPL11B RPL24B RPL14B RPL8A RPL27A RPL42B RPL2B RPL34B RPL40A RPL17B RPL39 RPL43B RPL14A RPL17A RPL40B RPL22A RPL10 RPL6B RPL6A RPL13B RPL36A RPL20A RPL16B RPL42A RPP2A RPL25 RPL20B RPL5 RPL33A RPL7B RPL1A RPL11A            53        83

cytosolic ribosome (sensu Eukarya) [GO:0005830]       1e-14   RPL19B RPS8A RPL32 RPS11B RPS6B RPS9B RPS29B RPL31A RPL13A RPS16B RPP1B RPL41B RPL35B RPL41A RPL35A RPL12B RPS17B RPS18A RPL27B RPL37B RPL12A RPL34A RPS24A RPS8B RPL23B RPL2A RPL30 RPL24A RPL7A RPL28 RPS2 RPS26A RPS25A RPL26B RPL11B RPS23A RPL24B RPL14B RPS20 RPL8A RPL27A RPS27B RPL42B RPS4B RPL2B RPL34B RPL40A RPS21B RPL17B RPL39 RPS22A RPS14B RPL43B RPS5 RPL14A RPS27A RPL17A RPS21A RPL40B RPS0B RPL22A RPL10 RPS25B RPS29A RPL6B RPS17A RPS18B RPL6A RPL13B RPS16A RPL36A RPS10B RPL20A RPL16B RPL42A RPS3 RPS19B RPP2A RPS15 RPS19A RPL25 RPS7A RPS10A RPL20B RPS12 RPS9A RPS6A RPL5 RPL33A RPL7B RPL1A RPL11A       92        151

eukaryotic 43S pre-initiation complex [GO:0016282]    1e-14   RPS8A RPS11B RPS6B RPS9B RPS29B RPS16B RPS17B RPS18A RPS24A RPS8B RPS2 RPS26A RPS25A RPS23A RPS20 RPS27B RPS4B RPS21B RPS22A RPS14B RPS5 RPS27A RPS21A RPS0B RPS25B RPS29A RPS17A RPS18B RPS16A RPS10B RPS3 RPS19B RPS15 RPS19A RPS7A RPS10A RPS12 RPS9A RPS6A     39        67

small ribosomal subunit [GO:0015935] 1e-14   RPS8A RPS11B RPS6B RPS9B RPS29B RPS16B RPS17B RPS18A RPS24A RPS8B RPS2 RPS26A RPS25A RPS23A RPS20 RPS27B RPS4B RPS21B RPS22A RPS14B RPS5 RPS27A RPS21A RPS0B RPS25B RPS29A RPS17A RPS18B RPS16A RPS10B RPS3 RPS19B RPS15 RPS19A RPS7A RPS10A RPS12 RPS9A RPS6A        39        88

large ribosomal subunit [GO:0015934]  1e-14   RPL19B RPL32 RPL31A RPL13A RPP1B RPL41B RPL35B RPL41A RPL35A RPL12B RPL27B RPL37B RPL12A RPL34A RPL23B RPL2A RPL30 RPL24A RPL7A RPL28 RPL26B RPL11B RPL24B RPL14B RPL8A RPL27A RPL42B RPL2B RPL34B RPL40A RPL17B RPL39 RPL43B RPL14A RPL17A RPL40B RPL22A RPL10 RPL6B YML025C RPL6A RPL13B RPL36A RPL20A RPL16B RPL42A RPP2A RPL25 RPL20B RPL5 RPL33A RPL7B RPL1A RPL11A      54        122

ribosome [GO:0005840]          1e-14   RPL19B RPS8A RPL32 RPS11B TEF2 RPS6B RPS9B SRO9 RPS29B RPL31A RPL13A RPS16B RPP1B RPL41B RPL35B RPL41A RPL35A SSB1 RPL12B RPS17B RPS18A RPL27B RPL37B RPL12A RPL34A RPS24A RPS8B RPL23B RPL2A RPL30 RPL24A RPL7A RPL28 RPS2 RPS26A RPS25A RPL26B RPL11B RPS23A RPL24B RPL14B RPS20 RPL8A RPL27A RPS27B RPL42B RPS4B RPL2B RPL34B RPL40A RPS21B RPL17B RPL39 RPS22A RPS14B RPL43B RPS5 RPL14A RPS27A RPL17A RPS21A RPL40B RPS0B RPL22A RPL10 RPS25B RPS29A RPL6B RPS17A YML025C RPS18B RPL6A RPL13B RPS16A RPL36A RPS10B RPL20A RPL16B RPL42A RPS3 RPS19B RPP2A RPS15 RPS19A RPL25 RPS7A RPS10A RPL20B RPS12 RPS9A RPS6A RPL5 RPL33A RPL7B RPL1A TEF1 RPL11A       97        258

cytosol [GO:0005829] 1e-14   RPL19B RPS8A RPL32 RPS11B RPS6B RPS9B RPS29B RPL31A RPL13A RPS16B RPP1B RPL41B RPL35B RPL41A RPL35A RPL12B RPS17B RPS18A RPL27B RPL37B RPL12A RPL34A RPS24A RPS8B RPL23B RPL2A RPL30 RPL24A RPL7A RPL28 RPS2 RPS26A RPS25A RPL26B RPL11B RPS23A RPL24B TDH3 RPL14B RPS20 RPL8A RPL27A RPS27B RPL42B RPS4B RPL2B RPL34B RPL40A RPS21B RPL17B RPL39 RPS22A RPS14B RPL43B RPS5 RPL14A RPS27A RPL17A RPS21A RPL40B RPS0B RPL22A RPL10 RPS25B RPS29A RPL6B RPS17A RPS18B RPL6A RPL13B RPS16A RPL36A RPS10B RPL20A RPL16B RPL42A RPS3 RPS19B RPP2A RPS15 GPD2 RPS19A RPL25 NOB1 RPS7A RPS10A RPL20B RPS12 RPS9A RPS6A RPL5 RPL33A RPL7B RPL1A RPL11A PRE2          96        310

intracellular [GO:0005622]       1e-14   POP5 PIM1 RPL19B SKT5 RPS8A RHK1 RPL32 ROX3 RPS11B TEF2 FZO1 RPS6B NTC20 RPS9B AGP1 SRO9 GPD1 TSR1 RPS29B RPL31A RPL13A RPS16B RPP1B RPL41B RPL35B RPL41A RPL35A SSB1 KRS1 CCT6 PMP3 CFT1 SHE9 SIZ1 RPL12B RPS17B ADA2 UTP6 RPS18A UGO1 RPL27B RPL37B GCN4 GEA2 RPL12A HAT2 RPL34A RPS24A AST2 RPS8B SLX8 RPL23B CCA1 RPH1 EPL1 RPL2A RPL30 RPL24A HSF1 MPS2 RPL7A RPL28 SNF4 RPS2 RPS26A RPS25A RPL26B RPL11B RPS23A RPL24B NSR1 TDH3 RAD2 TNA1 RPL14B RPS20 DUR3 RPL8A YHR009C RPL27A RPS27B YHR033W HXT5 RPL42B CHS7 RPS4B MNL1 RPL2B RPL34B RPL40A MLP2 SIP4 DPB11 MRS3 LCB3 RPS21B RPL17B RPL39 RPS22A RPS14B APS2 IME1 RPL43B RPS5 SFT1 RPL14A RPS27A STE3 RPL17A RPS21A RPL40B MLP1 UBI4 RPS0B RPL22A BUD20 RPL10 CTS1 RPS25B RPS29A BDF1 YLR437C CAR2 VMA6 RPL6B RPS17A YML025C RPS18B RPL6A BUD22 ERG5 ASC1 RPL13B RPS16A YMR144W RPL36A RRP5 RPS10B PEP5 RPL20A ZRC1 RPL16B YCK2 RPL42A RIA1 RPS3 RAP1 RPS19B RPP2A RPS15 GPD2 RPS19A RPL25 PFK27 NOB1 SGT1 RPS7A CRC1 RAS1 UBP2 RPS10A RPL20B RPA43 RPA190 TYE7 RPS12 RPS9A MOT1 RPS6A RPL5 RPL33A NAB3 RPL7B RPL1A ALG5 TEF1 RPL11A PRE2 COG4 RPC40 SGV1     181      2921

cell [GO:0005623]       1e-14   POP5 PIM1 RPL19B SKT5 AST1 RPS8A RHK1 RPL32 ROX3 RPS11B TEF2 FZO1 RPS6B NTC20 RPS9B KCC4 AGP1 HIS4 SRO9 GPD1 TSR1 RPS29B RPL31A RPL13A RPS16B RPP1B RPL41B RPL35B RPL41A RPL35A SSB1 KRS1 CCT6 PMP3 CFT1 SHE9 SIZ1 RPL12B RPS17B ADA2 UTP6 RPS18A UGO1 RPL27B RPL37B GCN4 GEA2 RPL12A HAT2 RPL34A RPS24A AST2 RPS8B SLX8 RPL23B CCA1 RPH1 EPL1 RPL2A RPL30 RPL24A HSF1 MPS2 RPL7A GUP1 RPL28 SNF4 RPS2 RPS26A RPS25A RPL26B RPL11B RPS23A RPL24B NSR1 TDH3 RAD2 TNA1 RPL14B RPS20 DUR3 RPL8A YHR009C RPL27A RPS27B YHR033W HXT5 RPL42B CHS7 RPS4B MNL1 RPL2B RPL34B RPL40A MLP2 SIP4 DPB11 MRS3 LCB3 RPS21B RPL17B RPL39 RPS22A RPS14B APS2 IME1 RPL43B RPS5 SFT1 RPL14A RPS27A STE3 RPL17A RPS21A RPL40B MLP1 UBI4 RPS0B RPL22A BUD20 RPL10 CTS1 RPS25B RPS29A BDF1 YLR437C CAR2 VMA6 RPL6B RPS17A YML025C RPS18B RPL6A SEC59 BUD22 ERG5 ASC1 RPL13B RPS16A YMR144W RPL36A RRP5 RPS10B PEP5 RPL20A ZRC1 RPL16B YCK2 RPL42A RIA1 RPS3 RAP1 RPS19B RPP2A RPS15 GPD2 RPS19A RPL25 PFK27 NOB1 SGT1 RPS7A CRC1 RAS1 UBP2 RPS10A RPL20B RPA43 RPA190 TYE7 RPS12 RPS9A MOT1 RPS6A RPL5 RPL33A GUP2 NAB3 RPL7B RPL1A ALG5 TEF1 RPL11A PRE2 COG4 RPC40 SGV1 187      3106

ribonucleoprotein complex [GO:0030529]        1.35447e-14    POP5 RPL19B RPS8A RPL32 RPS11B TEF2 RPS6B NTC20 RPS9B SRO9 RPS29B RPL31A RPL13A RPS16B RPP1B RPL41B RPL35B RPL41A RPL35A SSB1 RPL12B RPS17B UTP6 RPS18A RPL27B RPL37B RPL12A RPL34A RPS24A RPS8B RPL23B RPL2A RPL30 RPL24A RPL7A RPL28 RPS2 RPS26A RPS25A RPL26B RPL11B RPS23A RPL24B RPL14B RPS20 RPL8A RPL27A RPS27B RPL42B RPS4B RPL2B RPL34B RPL40A RPS21B RPL17B RPL39 RPS22A RPS14B RPL43B RPS5 RPL14A RPS27A RPL17A RPS21A RPL40B RPS0B RPL22A RPL10 RPS25B RPS29A RPL6B RPS17A YML025C RPS18B RPL6A RPL13B RPS16A RPL36A RRP5 RPS10B RPL20A RPL16B RPL42A RPS3 RPS19B RPP2A RPS15 RPS19A RPL25 RPS7A RPS10A RPL20B RPS12 RPS9A RPS6A RPL5 RPL33A RPL7B RPL1A TEF1 RPL11A             101      380

cytoplasm [GO:0005737]         8.21565e-14    PIM1 RPL19B SKT5 RPS8A RHK1 RPL32 RPS11B TEF2 FZO1 RPS6B RPS9B SRO9 GPD1 RPS29B RPL31A RPL13A RPS16B RPP1B RPL41B RPL35B RPL41A RPL35A SSB1 KRS1 CCT6 SHE9 RPL12B RPS17B RPS18A UGO1 RPL27B RPL37B GEA2 RPL12A HAT2 RPL34A RPS24A AST2 RPS8B RPL23B CCA1 RPL2A RPL30 RPL24A MPS2 RPL7A RPL28 SNF4 RPS2 RPS26A RPS25A RPL26B RPL11B RPS23A RPL24B TDH3 RPL14B RPS20 RPL8A YHR009C RPL27A RPS27B YHR033W RPL42B CHS7 RPS4B MNL1 RPL2B RPL34B RPL40A MRS3 LCB3 RPS21B RPL17B RPL39 RPS22A RPS14B APS2 RPL43B RPS5 SFT1 RPL14A RPS27A RPL17A RPS21A RPL40B UBI4 RPS0B RPL22A RPL10 CTS1 RPS25B RPS29A YLR437C CAR2 VMA6 RPL6B RPS17A YML025C RPS18B RPL6A ERG5 ASC1 RPL13B RPS16A RPL36A RPS10B PEP5 RPL20A ZRC1 RPL16B RPL42A RIA1 RPS3 RPS19B RPP2A RPS15 GPD2 RPS19A RPL25 PFK27 NOB1 RPS7A CRC1 UBP2 RPS10A RPL20B RPS12 RPS9A RPS6A RPL5 RPL33A RPL7B RPL1A ALG5 TEF1 RPL11A PRE2 COG4   139      1810

 

 

 

SMART Domains

Category          p-value In Category from Cluster          k          f

 

 

 

PFam-A Domains

Category          p-value In Category from Cluster          k          f

PF00467 (KOW)        3.6048e-06      RPL27B RPL26B RPL14B RPL27A RPS4B RPL14A            6          12

 

 

 

Yeast Two Hybrid - Uetz

Category          p-value In Category from Cluster          k          f

 

 

 

Yeast Two Hybrid - Ito (core)

Category          p-value In Category from Cluster          k          f

 

 

 

Yeast Two Hybrid - Ito (full)

Category          p-value In Category from Cluster          k          f

 

 

 

Synthetic Genetic Array Analysis

Category          p-value In Category from Cluster          k          f

 

 

 

MDS Proteomics Complexes

Category          p-value In Category from Cluster          k          f

 

 

 

Cellzome Complexes

Category          p-value In Category from Cluster          k          f

YBR031W (RPL4A)   1e-14   RPL13A RPL12B RPL27B RPL7A RPL28 RPL11B RPL27A RPL2B RPS14B RPL17A RPL10 RPL6A RPL13B RPL20A RPL16B RPS3 RPL25 RPL20B RPL33A RPL7B             20        39

 

 

 

Proteome Localization--Observed

Category          p-value In Category from Cluster          k          f

cyto      0.000125412   FUN19 RPL19B YBL029C-A RPS8A TEF2 RPS6B AGP1 HIS4 GPD1 RPL31A RPL13A RPL41A PPH22 SSB1 KRS1 YDR186C PRO1 RPS17B RPS18A YEL007W GEA2 HAT2 ZRG8 YER034W AST2 RPL23B BUD27 YFR017C RPL24A SNF4 RPS2 RPS26A RPL26B RPL11B YGR117C RPS23A RPL24B TDH3 RPS20 RPL8A YHR009C YHR033W RPL34B RHR2 YJL049W MRS3 RPS22A RPS5 HOM6 SFT1 RPL14A RPS27A RPL17A UBI4 PDC1 RPL22A RPL10 YLR437C CAR2 YMR099C ASC1 RPS16A YNL010W YNL011C RPL16B RIA1 RPS3 RPS15 MAM3 YOL109W RPL25 YGK3 PFK27 WHI2 RPS9A RPL5 RPL7B YPL199C TEF1 RPL11A          80        1324

 

 

 

Proteome Localization--Predicted+Observed

Category          p-value In Category from Cluster          k          f

cyt        2.99356e-09    FUN19 RPL19B YBL029W YBL060W SKT5 AST1 RPS8A RPL32 RPS11B TKL2 TEF2 FZO1 DTR1 RPS6B RPS9B AGP1 HIS4 SRO9 GPD1 TSR1 RPS29B RPL31A RXT3 RPL13A RPS16B RPP1B YDL133W RPL35B RPL41A YDL186W PPH22 RPL35A SSB1 KRS1 YDR042C YDR186C CCT6 PMP3 PRO1 ADE8 RPL12B RPS17B UTP6 RPS18A UGO1 RPL27B RPL37B YEL007W GEA2 YEL023C RPL12A HAT2 YEL057C ZRG8 YER034W RPS24A AST2 RPS8B SLX8 RPL23B BUD27 YFR017C RPL30 RPL24A RPL7A RPL28 RPS2 MON1 RPS26A RPS25A YGR033C RPL26B RPL11B YGR117C RPS23A RPL24B TDH3 TNA1 RPL14B RPS20 DUR3 RPL8A YHR009C RPL27A RPS27B YHR033W HXT5 YHR122W RPL42B CHS7 RPS4B MNL1 RPL2B RPL34B RHR2 YIL055C RPL40A YJL049W SIP4 MRS3 RPS21B RPL17B YJL178C RPL39 RPS22A RPS14B RPS5 HOM6 RPL14A RPS27A RPL17A RPS21A RPL40B UBI4 PDC1 RPS0B RPL22A RPL10 RPS25B YLR387C RPS29A YLR437C CAR2 VMA6 RPL6B RPS17A RPS18B RPL6A YMR099C MUB1 ASC1 RPL13B RPS16A RPL36A RPS10B PEP5 RPL20A YNL010W YNL011C RPL16B YNL101W YCK2 RPL42A RIA1 RPS3 RPS19B RPP2A RPS15 YOL109W RPS19A RPL25 YGK3 PFK27 WHI2 SGT1 RKI1 RPS7A CRC1 UBP2 YOR292C RPS10A RPL20B TYE7 SCP1 RPS12 RPS9A RPS6A RPL5 RPL33A KES1 RPL7B YPL199C RPL1A NEW1 TEF1 RPL11A PRE2 COG4 DBF20 179      3210

 

 

 

Deletions Consortium (Essentiality, Morphology)

Category          p-value In Category from Cluster          k          f

 

 

 

Yeast Fitness Data

Category          p-value In Category from Cluster          k          f

Slow Growers  1.02594e-05    RPL19B ROX3 RPS11B FZO1 RPS6B RPS9B RPS29B RPL31A RPL35A PMP3 PRO1 RPL12B RPS18A RPL34A RPS24A SLX8 RPL23B BUD27 RPL7A GUP1 SNF4 RPS23A NSR1 RPL27A RPS27B RPS4B RPS21B RPL39 RPL14A PDC1 YLR047C RPL22A BUD20 BDF1 VMA6 RPL6B RPS17A RPL6A BUD22 ASC1 RPL13B RPS16A RPL16B RPS19B RPS19A RPS7A RPS10A RPS6A        48        617

 

 

 

Published Complexes

Category          p-value In Category from Cluster          k          f

Andersen et al. (2002) - Curr Bio 12:1-            2.7393e-09      RPS6B RPS9B RPL31A RPL12B RPL27B RPS8B RPL7A RPL28 RPL26B RPL11B RPL14B RPL2B RPS5 RPL17A UBI4 RPL22A RPL6B RPS18B RPL13B RPS16A RRP5 RPL25 RPA190 RPS12 RPL5 RPC40 26        165

Harnicharnpai et al. (2001) - Mol Cell 8:505-   5.58912e-05    SSB1 RPS2 TDH3 RPS22A RPL10 RPS3 RPS15 RPL5             8          34

 

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Rap1-LeeORLiebChIP-exact.FunSpec.txt

Input Cluster (n=24)

YBR188C        NTC20

YBR189W       RPS9B

YCL030C        HIS4

YDL136W       RPL35B

YDR186C

YDR188W      CCT6

YDR500C       RPL37B

YDR501W      PLM2

YGL030W       RPL30

YGL031C        RPL24A

YGR258C       RAD2

YGR260W      TNA1

YKR057W      RPS21A

YMR013W-A

YMR014W      BUD22

YMR116C       ASC1

YNL216W      RAP1

YOL059W      GPD2

YOL060C       MAM3

YOR124C       UBP2

YOR338W

YPL144W

YPL145C        KES1

YPR080W       TEF1

 

Genes Not Found:

 

SNR72

SNR73

SNR74

SNR75

MIPS Functional Classification

Category          p-value In Category from Cluster          k          f

cytoplasm         2.0044e-06      RPS9B RPL35B CCT6 RPL37B RPL30 RPL24A RPS21A ASC1 UBP2 KES1 TEF1             11        554

PROTEIN SYNTHESIS          3.6467e-06      RPS9B RPL35B RPL37B RPL30 RPL24A RPS21A ASC1 RAP1 TEF1             9          359

ribosome biogenesis      1.0672e-05      RPS9B RPL35B RPL37B RPL30 RPL24A RPS21A ASC1   7          215

 

 

 

MIPS Phenotypes

Category          p-value In Category from Cluster          k          f

 

 

 

MIPS Subcellular Localization

Category          p-value In Category from Cluster          k          f

cytoplasm         3.93516e-06    RPS9B RPL35B CCT6 RPL37B RPL30 RPL24A RPS21A ASC1 UBP2 KES1 TEF1             11        593

 

 

 

MIPS Protein Complexes

Category          p-value In Category from Cluster          k          f

Cytoplasmic ribosomes 5.45736e-07    RPS9B RPL35B RPL37B RPL30 RPL24A RPS21A ASC1   7          138

Translation complexes   1.77924e-06    RPS9B RPL35B RPL37B RPL30 RPL24A RPS21A ASC1 TEF1      8          240

 

 

 

MIPS Protein Classes

Category          p-value In Category from Cluster          k          f

 

 

 

GO Molecular Function

Category          p-value In Category from Cluster          k          f

 

 

 

GO Biological Process

Category          p-value In Category from Cluster          k          f

 

 

 

GO Cellular Component

Category          p-value In Category from Cluster          k          f

cytosolic ribosome (sensu Eukarya) [GO:0005830]       1.66553e-05    RPS9B RPL35B RPL37B RPL30 RPL24A RPS21A          6          151

ribosome [GO:0005840]          3.50134e-05    RPS9B RPL35B RPL37B RPL30 RPL24A RPS21A TEF1    7          258

ribonucleoprotein complex [GO:0030529]        5.27998e-05    NTC20 RPS9B RPL35B RPL37B RPL30 RPL24A RPS21A TEF1             8          380

cytosol [GO:0005829] 0.000113029   RPS9B RPL35B RPL37B RPL30 RPL24A RPS21A GPD2   7          310

 

 

 

SMART Domains

Category          p-value In Category from Cluster          k          f

 

 

 

PFam-A Domains

Category          p-value In Category from Cluster          k          f

 

 

 

Yeast Two Hybrid - Uetz

Category          p-value In Category from Cluster          k          f

 

 

 

Yeast Two Hybrid - Ito (core)

Category          p-value In Category from Cluster          k          f

 

 

 

Yeast Two Hybrid - Ito (full)

Category          p-value In Category from Cluster          k          f

 

 

 

Synthetic Genetic Array Analysis

Category          p-value In Category from Cluster          k          f

 

 

 

MDS Proteomics Complexes

Category          p-value In Category from Cluster          k          f

 

 

 

Cellzome Complexes

Category          p-value In Category from Cluster          k          f

 

 

 

Proteome Localization--Observed

Category          p-value In Category from Cluster          k          f

 

 

 

Proteome Localization--Predicted+Observed

Category          p-value In Category from Cluster          k          f

 

 

 

Deletions Consortium (Essentiality, Morphology)

Category          p-value In Category from Cluster          k          f

 

 

 

Yeast Fitness Data

Category          p-value In Category from Cluster          k          f

 

 

 

Published Complexes

Category          p-value In Category from Cluster          k          f


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Rap1-PBMandLeeORLiebChIP-alldata.FunSpec.txt

Input Cluster (n=292)

YAL033W       POP5

YAL034C        FUN19

YAL051W       OAF1

YBL022C        PIM1

YBL027W       RPL19B

YBL028C

YBL029C-A

YBL029W

YBL060W

YBL061C        SKT5

YBL069W       AST1

YBL071W-A   KTI11

YBL072C        RPS8A

YBL087C        RPL23A

YBR048W       RPS11B

YBR084C-A   RPL19A

YBR085W       AAC3

YBR117C        TKL2

YBR118W       TEF2

YBR179C        FZO1

YBR180W       DTR1

YBR181C        RPS6B

YBR188C        NTC20

YBR189W       RPS9B

YBR191W       RPL21A

YCL024W       KCC4

YCL025C        AGP1

YCL030C        HIS4

YCL036W       GFD2

YCL037C        SRO9

YDL022W       GPD1

YDL055C        PSA1

YDL060W       TSR1

YDL061C        RPS29B

YDL075W       RPL31A

YDL076C        RXT3

YDL082W       RPL13A

YDL083C        RPS16B

YDL130W       RPP1B

YDL133C-A   RPL41B

YDL133W

YDL136W       RPL35B

YDL168W       SFA1

YDL169C        UGX2

YDL184C        RPL41A

YDL186W

YDL188C        PPH22

YDL191W       RPL35A

YDL229W       SSB1

YDR036C

YDR037W      KRS1

YDR064W      RPS13

YDR276C       PMP3

YDR300C       PRO1

YDR301W      CFT1

YDR324C       UTP4

YDR325W      YCG1

YDR393W      SHE9

YDR408C       ADE8

YDR409W      SIZ1

YDR418W      RPL12B

YDR447C       RPS17B

YDR448W      ADA2

YDR449C       UTP6

YDR450W      RPS18A

YDR470C       UGO1

YDR471W      RPL27B

YDR500C       RPL37B

YDR501W      PLM2

YEL007W

YEL009C        GCN4

YEL022W       GEA2

YEL023C

YEL054C        RPL12A

YER031C        YPT31

YER032W       FIR1

YER033C        ZRG8

YER034W

YER045C        ACA1

YER046W       SPO73

YER056C-A    RPL34A

YER074W       RPS24A

YER101C        AST2

YER102W       RPS8B

YER116C        SLX8

YER117W       RPL23B

YER130C

YER131W       RPS26B

YER168C        CCA1

YER169W       RPH1

YFL021W       GAT1

YFL022C        FRS2

YFL023W       BUD27

YFL024C        EPL1

YFL034C-A    RPL22B

YFL034W

YFL051C

YFR031C-A    RPL2A

YGL030W       RPL30

YGL031C        RPL24A

YGL071W       RCS1

YGL073W       HSF1

YGL075C        MPS2

YGL083W       SCY1

YGL084C        GUP1

YGL103W       RPL28

YGL104C        VPS73

YGL115W       SNF4

YGL123W       RPS2

YGL124C        MON1

YGL135W       RPL1B

YGL136C        MRM2

YGL189C        RPS26A

YGL258W       VEL1

YGR027C       RPS25A

YGR033C

YGR034W      RPL26B

YGR085C       RPL11B

YGR117C

YGR118W      RPS23A

YGR180C       RNR4

YGR192C       TDH3

YGR213C       RTA1

YGR214W      RPS0A

YHL001W       RPL14B

YHL033C        RPL8A

YHR021C       RPS27B

YHR021W-A  ECM12

YHR033W

YHR096C       HXT5

YHR122W

YHR141C       RPL42B

YHR142W      CHS7

YHR203C       RPS4B

YHR204W      MNL1

YIL018W        RPL2B

YIL053W        RHR2

YIL055C

YIL133C         RPL16A

YIL148W        RPL40A

YIL149C         MLP2

YJL049W

YJL089W        SIP4

YJL090C         DPB11

YJL134W        LCB3

YJL136C         RPS21B

YJL189W        RPL39

YJL190C         RPS22A

YJL191W        RPS14B

YJL192C

YJR058C         APS2

YJR059W        PTK2

YJR123W        RPS5

YJR134C         SGM1

YJR139C         HOM6

YJR145C         RPS4A

YJR147W        HMS2

YKL006C-A   SFT1

YKL006W      RPL14A

YKL156W      RPS27A

YKL175W      ZRT3

YKL176C       LST4

YKL178C       STE3

YKL180W      RPL17A

YKR057W      RPS21A

YKR092C       SRP40

YKR093W      PTR2

YKR094C       RPL40B

YKR095W      MLP1

YKR102W      FLO10

YLL039C        UBI4

YLR044C        PDC1

YLR047C

YLR048W       RPS0B

YLR061W       RPL22A

YLR074C        BUD20

YLR075W       RPL10

YLR103C        CDC45

YLR104W

YLR166C        SEC10

YLR167W       RPS31

YLR254C

YLR256W       HAP1

YLR286C        CTS1

YLR287C-A    RPS30A

YLR333C        RPS25B

YLR344W       RPL26A

YLR387C

YLR388W       RPS29A

YLR390W-A   CCW14

YLR399C        BDF1

YLR437C

YLR438W       CAR2

YLR441C        RPS1A

YLR447C        VMA6

YLR448W       RPL6B

YML024W      RPS17A

YML025C

YML026C       RPS18B

YML063W      RPS1B

YML064C       TEM1

YML073C       RPL6A

YMR013C       SEC59

YMR013W-A

YMR014W      BUD22

YMR015C       ERG5

YMR116C       ASC1

YMR142C       RPL13B

YMR143W      RPS16A

YMR144W

YMR194W      RPL36A

YMR229C       RRP5

YMR230W      RPS10B

YMR231W      PEP5

YMR242C       RPL20A

YMR243C       ZRC1

YMR244W

YMR265C

YMR266W      RSN1

YNL010W

YNL011C

YNL067W      RPL9B

YNL068C       FKH2

YNL069C       RPL16B

YNL096C       RPS7B

YNL101W

YNL142W      MEP2

YNL144C

YNL154C       YCK2

YNL216W      RAP1

YNL253W

YNL254C

YNL288W      CAF40

YNL302C       RPS19B

YOL039W      RPP2A

YOL040C       RPS15

YOL052C-A   DDR2

YOL059W      GPD2

YOL060C       MAM3

YOL082W      CVT19

YOL109W

YOL121C       RPS19A

YOL127W      RPL25

YOL128C       YGK3

YOL136C       PFK27

YOR043W      WHI2

YOR056C       NOB1

YOR057W      SGT1

YOR095C       RKI1

YOR096W      RPS7A

YOR124C       UBP2

YOR161C

YOR179C

YOR234C       RPL33B

YOR292C

YOR293W      RPS10A

YOR302W

YOR303W      CPA1

YOR312C       RPL20B

YOR338W

YOR340C       RPA43

YOR341W      RPA190

YOR354C       MSC6

YOR355W      GDS1

YOR359W      VTS1

YOR365C

YOR367W      SCP1

YOR369C       RPS12

YPL016W       SWI1

YPL017C

YPL081W       RPS9A

YPL082C        MOT1

YPL090C        RPS6A

YPL131W       RPL5

YPL143W       RPL33A

YPL162C

YPL198W       RPL7B

YPL199C

YPL220W       RPL1A

YPL249C-A    RPL36B

YPR029C        APL4

YPR030W       CSR2

YPR042C        PUF2

YPR043W       RPL43A

YPR080W       TEF1

YPR102C        RPL11A

YPR103W       PRE2

YPR105C        COG4

YPR106W       ISR1

YPR110C        RPC40

YPR111W       DBF20

YPR161C        SGV1

 

Genes Not Found:

 

LSR1

SNR17A

SNR17B

SNR34

SNR40

SNR62

SNR72

SNR73

SNR74

SNR75

SNR76

SNR77

SNR78

TE%28UUC%29L

TK%28UUU%29D

TP%28AGG%29C

YBL071C-B

YGL188C-A

YGR027W-A

YGR027W-B

YLR264C-A

YMR230W-A

YMR242W-A

YNL067W-B

YOR161C-C

MIPS Functional Classification

Category          p-value In Category from Cluster          k          f

ribosome biogenesis      1e-14   RPL19B RPS8A RPL23A RPS11B RPL19A RPS6B RPS9B RPL21A RPS29B RPL31A RPL13A RPS16B RPP1B RPL41B RPL35B RPL41A RPL35A RPS13 RPL12B RPS17B RPS18A RPL27B RPL37B RPL12A RPL34A RPS24A RPS8B RPL23B RPS26B RPL22B RPL2A RPL30 RPL24A RPL28 RPS2 RPL1B RPS26A RPS25A RPL26B RPL11B RPS23A RPS0A RPL14B RPL8A RPS27B RPL42B RPS4B RPL2B RPL16A RPL40A RPS21B RPL39 RPS22A RPS14B RPS5 RPS4A RPL14A RPS27A RPL17A RPS21A RPL40B RPS0B RPL22A RPL10 RPS31 RPS30A RPS25B RPL26A RPS29A RPS1A RPL6B RPS17A YML025C RPS18B RPS1B RPL6A ASC1 RPL13B RPS16A RPL36A RPS10B RPL20A RPL9B RPL16B RPS7B RPS19B RPP2A RPS15 RPS19A RPL25 RPS7A RPL33B RPS10A RPL20B RPS12 RPS9A RPS6A RPL5 RPL33A RPL7B RPL1A RPL36B RPL43A RPL11A        104      215

cytoplasm         1e-14   RPL19B RPS8A RPL23A RPS11B RPL19A TKL2 TEF2 RPS6B RPS9B RPL21A GPD1 RPS29B RPL31A RPL13A RPS16B RPP1B RPL41B RPL35B RPL41A RPL35A SSB1 KRS1 RPS13 PRO1 ADE8 RPL12B RPS17B RPS18A RPL27B RPL37B RPL12A RPL34A RPS24A RPS8B RPL23B RPS26B CCA1 FRS2 RPL30 RPL24A RPL28 RPS2 RPL1B RPS26A RPS25A RPL26B RPL11B RPS23A TDH3 RPS0A RPL14B RPL8A RPS27B RPL42B RPS4B RPL2B RPL16A RPL40A RPS21B RPL39 RPS22A RPS14B RPS5 RPS4A RPL14A RPS27A RPL17A RPS21A RPL40B UBI4 PDC1 RPS0B RPL10 SEC10 RPS31 RPS30A RPS25B RPL26A RPS29A CAR2 RPS1A RPL6B RPS17A RPS18B RPS1B RPL6A ASC1 RPL13B RPS16A RPL36A RPS10B RPL20A RPL9B RPL16B RPS7B RPS19B RPP2A RPS15 RPS19A RPL25 RKI1 RPS7A UBP2 RPS10A YOR302W CPA1 RPL20B RPS12 RPS9A RPS6A RPL5 RPL33A RPL7B RPL1A RPL36B RPL43A TEF1 RPL11A    118      554

SUBCELLULAR LOCALISATION   1e-14   POP5 OAF1 PIM1 RPL19B RPS8A RPL23A RPS11B RPL19A AAC3 TKL2 TEF2 FZO1 RPS6B RPS9B RPL21A KCC4 AGP1 GPD1 RPS29B RPL31A RPL13A RPS16B RPP1B RPL41B RPL35B RPL41A RPL35A SSB1 KRS1 RPS13 PRO1 CFT1 ADE8 RPL12B RPS17B ADA2 RPS18A RPL27B RPL37B GCN4 GEA2 RPL12A YPT31 RPL34A RPS24A RPS8B RPL23B RPS26B CCA1 GAT1 FRS2 YFL051C RPL30 RPL24A RCS1 HSF1 MPS2 RPL28 SNF4 RPS2 RPL1B RPS26A RPS25A RPL26B RPL11B RPS23A RNR4 TDH3 RPS0A RPL14B RPL8A RPS27B HXT5 RPL42B CHS7 RPS4B RPL2B RPL16A RPL40A MLP2 SIP4 DPB11 RPS21B RPL39 RPS22A RPS14B APS2 RPS5 RPS4A SFT1 RPL14A RPS27A STE3 RPL17A RPS21A SRP40 PTR2 RPL40B MLP1 FLO10 UBI4 PDC1 RPS0B RPL10 CDC45 SEC10 RPS31 HAP1 CTS1 RPS30A RPS25B RPL26A RPS29A BDF1 CAR2 RPS1A VMA6 RPL6B RPS17A YML025C RPS18B RPS1B RPL6A SEC59 ERG5 ASC1 RPL13B RPS16A RPL36A RRP5 RPS10B PEP5 RPL20A ZRC1 RPL9B FKH2 RPL16B RPS7B MEP2 YCK2 RAP1 RPS19B RPP2A RPS15 GPD2 RPS19A RPL25 RKI1 RPS7A UBP2 RPS10A YOR302W CPA1 RPL20B RPA43 RPA190 RPS12 SWI1 RPS9A MOT1 RPS6A RPL5 RPL33A RPL7B RPL1A RPL36B RPL43A TEF1 RPL11A PRE2 RPC40         171      2256

PROTEIN SYNTHESIS          1.90958e-14    RPL19B RPS8A RPL23A RPS11B RPL19A TEF2 RPS6B RPS9B RPL21A RPS29B RPL31A RPL13A RPS16B RPP1B RPL41B RPL35B RPL41A RPL35A SSB1 KRS1 RPS13 RPL12B RPS17B RPS18A RPL27B RPL37B RPL12A RPL34A RPS24A RPS8B RPL23B RPS26B FRS2 RPL22B RPL2A RPL30 RPL24A RPL28 RPS2 RPL1B RPS26A RPS25A RPL26B RPL11B RPS23A RPS0A RPL14B RPL8A RPS27B RPL42B RPS4B RPL2B RPL16A RPL40A RPS21B RPL39 RPS22A RPS14B RPS5 RPS4A RPL14A RPS27A RPL17A RPS21A RPL40B UBI4 RPS0B RPL22A RPL10 RPS31 RPS30A RPS25B RPL26A RPS29A RPS1A RPL6B RPS17A YML025C RPS18B RPS1B RPL6A ASC1 RPL13B RPS16A RPL36A RPS10B RPL20A RPL9B RPL16B RPS7B RAP1 RPS19B RPP2A RPS15 RPS19A RPL25 RPS7A RPL33B RPS10A YOR302W RPL20B RPS12 RPS9A RPS6A RPL5 RPL33A RPL7B RPL1A RPL36B RPL43A TEF1 RPL11A             112      359

 

 

 

MIPS Phenotypes

Category          p-value In Category from Cluster          k          f

 

 

 

MIPS Subcellular Localization

Category          p-value In Category from Cluster          k          f

cytoplasm         1e-14   RPL19B RPS8A RPL23A RPS11B RPL19A TKL2 TEF2 RPS6B RPS9B RPL21A SRO9 GPD1 RPS29B RPL31A RPL13A RPS16B RPP1B RPL41B RPL35B RPL41A RPL35A SSB1 KRS1 RPS13 PRO1 ADE8 RPL12B RPS17B RPS18A RPL27B RPL37B RPL12A RPL34A RPS24A RPS8B RPL23B RPS26B CCA1 FRS2 RPL30 RPL24A RPL28 RPS2 RPL1B RPS26A RPS25A RPL26B RPL11B RPS23A TDH3 RPS0A RPL14B RPL8A RPS27B RPL42B RPS4B RPL2B RPL16A RPL40A RPS21B RPL39 RPS22A RPS14B RPS5 RPS4A RPL14A RPS27A RPL17A RPS21A RPL40B UBI4 PDC1 RPS0B RPL22A RPL10 SEC10 RPS31 RPS30A RPS25B RPL26A RPS29A CAR2 RPS1A RPL6B RPS17A RPS18B RPS1B RPL6A ASC1 RPL13B RPS16A RPL36A RPS10B RPL20A RPL9B RPL16B RPS7B RPS19B RPP2A RPS15 RPS19A RPL25 RKI1 RPS7A UBP2 RPL33B RPS10A YOR302W CPA1 RPL20B RPS12 RPS9A RPS6A RPL5 RPL33A RPL7B RPL1A RPL36B RPL43A TEF1 RPL11A          121      593

 

 

 

MIPS Protein Complexes

Category          p-value In Category from Cluster          k          f

cytoplasmic ribosomal small subunit       1e-14   RPS8A RPS11B RPS6B RPS9B RPS29B RPS16B RPS13 RPS17B RPS18A RPS24A RPS8B RPS26B RPS2 RPS26A RPS25A RPS23A RPS0A RPS27B RPS4B RPS21B RPS22A RPS14B RPS5 RPS4A RPS27A RPS21A RPS0B RPS31 RPS30A RPS25B RPS29A RPS1A RPS17A RPS18B RPS1B ASC1 RPS16A RPS10B RPS7B RPS19B RPS15 RPS19A RPS7A RPS10A RPS12 RPS9A RPS6A          47            57

Cytoplasmic ribosomes 1e-14   RPL19B RPS8A RPL23A RPS11B RPL19A RPS6B RPS9B RPL21A RPS29B RPL31A RPL13A RPS16B RPP1B RPL41B RPL35B RPL41A RPL35A RPS13 RPL12B RPS17B RPS18A RPL27B RPL37B RPL12A RPL34A RPS24A RPS8B RPL23B RPS26B RPL22B RPL2A RPL30 RPL24A RPL28 RPS2 RPL1B RPS26A RPS25A RPL26B RPL11B RPS23A RPS0A RPL14B RPL8A RPS27B RPL42B RPS4B RPL2B RPL16A RPL40A RPS21B RPL39 RPS22A RPS14B RPS5 RPS4A RPL14A RPS27A RPL17A RPS21A RPL40B RPS0B RPL22A RPL10 RPS31 RPS30A RPS25B RPL26A RPS29A RPS1A RPL6B RPS17A RPS18B RPS1B RPL6A ASC1 RPL13B RPS16A RPL36A RPS10B RPL20A RPL9B RPL16B RPS7B RPS19B RPP2A RPS15 RPS19A RPL25 RPS7A RPL33B RPS10A RPL20B RPS12 RPS9A RPS6A RPL5 RPL33A RPL7B RPL1A RPL36B RPL43A RPL11A        103      138

cytoplasmic ribosomal large subunit       1e-14   RPL19B RPL23A RPL19A RPL21A RPL31A RPL13A RPP1B RPL41B RPL35B RPL41A RPL35A RPL12B RPL27B RPL37B RPL12A RPL34A RPL23B RPL22B RPL2A RPL30 RPL24A RPL28 RPL1B RPL26B RPL11B RPL14B RPL8A RPL42B RPL2B RPL16A RPL40A RPL39 RPL14A RPL17A RPL40B RPL22A RPL10 RPL26A RPL6B RPL6A RPL13B RPL36A RPL20A RPL9B RPL16B RPP2A RPL25 RPL33B RPL20B RPL5 RPL33A RPL7B RPL1A RPL36B RPL43A RPL11A          56        81

Translation complexes   1e-14   RPL19B RPS8A RPL23A RPS11B RPL19A TEF2 RPS6B RPS9B RPL21A RPS29B RPL31A RPL13A RPS16B RPP1B RPL41B RPL35B RPL41A RPL35A RPS13 RPL12B RPS17B RPS18A RPL27B RPL37B RPL12A RPL34A RPS24A RPS8B RPL23B RPS26B RPL22B RPL2A RPL30 RPL24A RPL28 RPS2 RPL1B RPS26A RPS25A RPL26B RPL11B RPS23A RPS0A RPL14B RPL8A RPS27B RPL42B RPS4B RPL2B RPL16A RPL40A RPS21B RPL39 RPS22A RPS14B RPS5 RPS4A RPL14A RPS27A RPL17A RPS21A RPL40B RPS0B RPL22A RPL10 RPS31 RPS30A RPS25B RPL26A RPS29A RPS1A RPL6B RPS17A RPS18B RPS1B RPL6A ASC1 RPL13B RPS16A RPL36A RPS10B RPL20A RPL9B RPL16B RPS7B RPS19B RPP2A RPS15 RPS19A RPL25 RPS7A RPL33B RPS10A RPL20B RPS12 RPS9A RPS6A RPL5 RPL33A RPL7B RPL1A RPL36B RPL43A TEF1 RPL11A          105      240

 

 

 

MIPS Protein Classes

Category          p-value In Category from Cluster          k          f

Ubiquitin           6.43144e-05    RPL40A RPL40B UBI4 RPS31          4          6

 

 

 

GO Molecular Function

Category          p-value In Category from Cluster          k          f

structural constituent of ribosome [GO:0003735]          1e-14   RPL19B RPS8A RPL23A RPS11B RPL19A RPS6B RPS9B RPL21A RPS29B RPL31A RPL13A RPS16B RPP1B RPL41B RPL35B RPL41A RPL35A RPS13 RPL12B RPS17B RPS18A RPL27B RPL37B RPL12A RPL34A RPS24A RPS8B RPL23B RPS26B RPL22B RPL2A RPL30 RPL24A RPL28 RPS2 RPL1B RPS26A RPS25A RPL26B RPL11B RPS23A RPS0A RPL14B RPL8A RPS27B RPL42B RPS4B RPL2B RPL16A RPL40A RPS21B RPL39 RPS22A RPS14B RPS5 RPS4A RPL14A RPS27A RPL17A RPS21A RPL40B RPS0B RPL22A RPL10 RPS31 RPS30A RPS25B RPL26A RPS29A RPS1A RPL6B RPS17A YML025C RPS18B RPS1B RPL6A RPL13B RPS16A RPL36A RPS10B RPL20A RPL9B RPL16B RPS7B RPS19B RPP2A RPS15 RPS19A RPL25 RPS7A RPL33B RPS10A RPL20B RPS12 RPS9A RPS6A RPL5 RPL33A RPL7B RPL1A RPL36B RPL43A RPL11A    103      206

structural molecule [GO:0005198]        1e-14   RPL19B RPS8A RPL23A RPS11B RPL19A RPS6B RPS9B RPL21A RPS29B RPL31A RPL13A RPS16B RPP1B RPL41B RPL35B RPL41A RPL35A RPS13 RPL12B RPS17B RPS18A RPL27B RPL37B RPL12A RPL34A RPS24A RPS8B RPL23B RPS26B RPL22B RPL2A RPL30 RPL24A MPS2 RPL28 RPS2 RPL1B RPS26A RPS25A RPL26B RPL11B RPS23A RPS0A RPL14B RPL8A RPS27B RPL42B RPS4B RPL2B RPL16A RPL40A RPS21B RPL39 RPS22A RPS14B RPS5 RPS4A RPL14A RPS27A RPL17A RPS21A RPL40B RPS0B RPL22A RPL10 RPS31 RPS30A RPS25B RPL26A RPS29A CCW14 RPS1A RPL6B RPS17A YML025C RPS18B RPS1B RPL6A RPL13B RPS16A RPL36A RPS10B RPL20A RPL9B RPL16B RPS7B RPS19B RPP2A RPS15 RPS19A RPL25 RPS7A RPL33B RPS10A RPL20B RPS12 RPS9A RPS6A RPL5 RPL33A RPL7B RPL1A RPL36B RPL43A RPL11A    105      310

 

 

 

GO Biological Process

Category          p-value In Category from Cluster          k          f

biosynthesis [GO:0009058]      1e-14   RPL19B SKT5 RPS8A RPL23A RPS11B RPL19A TEF2 RPS6B RPS9B RPL21A HIS4 SRO9 PSA1 RPS29B RPL31A RPL13A RPS16B RPP1B RPL41B RPL35B RPL41A PPH22 RPL35A SSB1 KRS1 RPS13 PRO1 ADE8 RPL12B RPS17B RPS18A RPL27B RPL37B GCN4 RPL12A RPL34A RPS24A RPS8B RPL23B RPS26B CCA1 FRS2 RPL22B RPL2A RPL30 RPL24A RPL28 RPS2 RPL1B RPS26A RPS25A RPL26B RPL11B RPS23A TDH3 RPS0A RPL14B RPL8A RPS27B RPL42B CHS7 RPS4B RPL2B RHR2 RPL16A RPL40A SIP4 LCB3 RPS21B RPL39 RPS22A RPS14B RPS5 RPS4A RPL14A RPS27A RPL17A RPS21A RPL40B RPS0B RPL22A RPL10 RPS31 RPS30A RPS25B RPL26A RPS29A RPS1A RPL6B RPS17A YML025C RPS18B RPS1B RPL6A SEC59 ERG5 RPL13B RPS16A RPL36A RPS10B RPL20A RPL9B RPL16B RPS7B RPS19B RPP2A RPS15 RPS19A RPL25 RPS7A RPL33B RPS10A CPA1 RPL20B RPS12 RPS9A RPS6A RPL5 RPL33A RPL7B RPL1A RPL36B RPL43A TEF1 RPL11A       125      731

protein metabolism [GO:0019538]        1e-14   PIM1 RPL19B AST1 RPS8A RPL23A RPS11B RPL19A TEF2 RPS6B RPS9B RPL21A KCC4 SRO9 PSA1 RPS29B RPL31A RPL13A RPS16B RPP1B RPL41B RPL35B RPL41A PPH22 RPL35A SSB1 KRS1 RPS13 SIZ1 RPL12B RPS17B ADA2 RPS18A RPL27B RPL37B GEA2 RPL12A YPT31 RPL34A RPS24A RPS8B RPL23B RPS26B CCA1 FRS2 EPL1 RPL22B RPL2A RPL30 RPL24A RPL28 VPS73 RPS2 MON1 RPL1B RPS26A RPS25A RPL26B RPL11B RPS23A RPS0A RPL14B RPL8A RPS27B RPL42B CHS7 RPS4B MNL1 RPL2B RPL16A RPL40A MLP2 RPS21B RPL39 RPS22A RPS14B RPS5 RPS4A SFT1 RPL14A RPS27A LST4 RPL17A RPS21A RPL40B MLP1 UBI4 RPS0B RPL22A RPL10 SEC10 RPS31 RPS30A RPS25B RPL26A RPS29A RPS1A RPL6B RPS17A YML025C RPS18B RPS1B RPL6A SEC59 RPL13B RPS16A RPL36A RPS10B PEP5 RPL20A RPL9B RPL16B RPS7B YCK2 RPS19B RPP2A RPS15 CVT19 RPS19A RPL25 YGK3 NOB1 RPS7A UBP2 RPL33B RPS10A RPL20B VTS1 RPS12 RPS9A RPS6A RPL5 RPL33A RPL7B RPL1A RPL36B RPL43A TEF1 RPL11A PRE2 COG4 DBF20 SGV1           142      1168

metabolism [GO:0008152]       1e-14   POP5 OAF1 PIM1 RPL19B SKT5 AST1 RPS8A RPL23A RPS11B RPL19A TKL2 TEF2 RPS6B NTC20 RPS9B RPL21A KCC4 HIS4 SRO9 PSA1 RPS29B RPL31A RPL13A RPS16B RPP1B RPL41B RPL35B SFA1 RPL41A PPH22 RPL35A SSB1 KRS1 RPS13 PRO1 CFT1 UTP4 ADE8 SIZ1 RPL12B RPS17B ADA2 UTP6 RPS18A RPL27B RPL37B GCN4 GEA2 RPL12A YPT31 FIR1 ACA1 RPL34A RPS24A RPS8B SLX8 RPL23B RPS26B CCA1 RPH1 GAT1 FRS2 EPL1 RPL22B RPL2A RPL30 RPL24A RCS1 GUP1 RPL28 VPS73 SNF4 RPS2 MON1 RPL1B MRM2 RPS26A RPS25A RPL26B RPL11B RPS23A RNR4 TDH3 RPS0A RPL14B RPL8A RPS27B RPL42B CHS7 RPS4B MNL1 RPL2B RHR2 RPL16A RPL40A MLP2 SIP4 DPB11 LCB3 RPS21B RPL39 RPS22A RPS14B RPS5 HOM6 RPS4A SFT1 RPL14A RPS27A LST4 RPL17A RPS21A RPL40B MLP1 UBI4 PDC1 RPS0B RPL22A RPL10 CDC45 SEC10 RPS31 HAP1 RPS30A RPS25B RPL26A RPS29A CAR2 RPS1A RPL6B RPS17A YML025C RPS18B RPS1B RPL6A SEC59 ERG5 RPL13B RPS16A RPL36A RRP5 RPS10B PEP5 RPL20A ZRC1 RPL9B FKH2 RPL16B RPS7B YCK2 RAP1 CAF40 RPS19B RPP2A RPS15 GPD2 CVT19 RPS19A RPL25 YGK3 PFK27 NOB1 RKI1 RPS7A UBP2 RPL33B RPS10A CPA1 RPL20B RPA43 RPA190 MSC6 GDS1 VTS1 RPS12 SWI1 RPS9A MOT1 RPS6A RPL5 RPL33A RPL7B RPL1A RPL36B PUF2 RPL43A TEF1 RPL11A PRE2 COG4 RPC40 DBF20 SGV1           193      2693

cell growth and/or maintenance [GO:0008151] 1e-14   POP5 OAF1 PIM1 RPL19B SKT5 AST1 KTI11 RPS8A RPL23A RPS11B RPL19A AAC3 TKL2 TEF2 FZO1 RPS6B NTC20 RPS9B RPL21A KCC4 AGP1 HIS4 SRO9 GPD1 PSA1 TSR1 RPS29B RPL31A RPL13A RPS16B RPP1B RPL41B RPL35B SFA1 RPL41A PPH22 RPL35A SSB1 YDR036C KRS1 RPS13 PMP3 PRO1 CFT1 UTP4 YCG1 SHE9 ADE8 SIZ1 RPL12B RPS17B ADA2 UTP6 RPS18A UGO1 RPL27B RPL37B GCN4 GEA2 RPL12A YPT31 FIR1 ACA1 SPO73 RPL34A RPS24A RPS8B SLX8 RPL23B RPS26B CCA1 RPH1 GAT1 FRS2 BUD27 EPL1 RPL22B RPL2A RPL30 RPL24A RCS1 HSF1 MPS2 GUP1 RPL28 VPS73 SNF4 RPS2 MON1 RPL1B MRM2 RPS26A RPS25A RPL26B RPL11B RPS23A RNR4 TDH3 RPS0A RPL14B RPL8A RPS27B ECM12 HXT5 RPL42B CHS7 RPS4B MNL1 RPL2B RHR2 RPL16A RPL40A MLP2 SIP4 DPB11 LCB3 RPS21B RPL39 RPS22A RPS14B APS2 PTK2 RPS5 HOM6 RPS4A HMS2 SFT1 RPL14A RPS27A ZRT3 LST4 STE3 RPL17A RPS21A SRP40 PTR2 RPL40B MLP1 UBI4 PDC1 RPS0B RPL22A BUD20 RPL10 CDC45 SEC10 RPS31 HAP1 CTS1 RPS30A RPS25B RPL26A RPS29A CCW14 BDF1 CAR2 RPS1A VMA6 RPL6B RPS17A YML025C RPS18B RPS1B TEM1 RPL6A SEC59 BUD22 ERG5 RPL13B RPS16A RPL36A RRP5 RPS10B PEP5 RPL20A ZRC1 RPL9B FKH2 RPL16B RPS7B MEP2 YCK2 RAP1 CAF40 RPS19B RPP2A RPS15 DDR2 GPD2 MAM3 CVT19 RPS19A RPL25 YGK3 PFK27 WHI2 NOB1 SGT1 RKI1 RPS7A UBP2 RPL33B RPS10A CPA1 RPL20B RPA43 RPA190 MSC6 GDS1 VTS1 RPS12 SWI1 RPS9A MOT1 RPS6A RPL5 RPL33A RPL7B RPL1A RPL36B APL4 CSR2 PUF2 RPL43A TEF1 RPL11A PRE2 COG4 RPC40 DBF20 SGV1 231      3657

protein biosynthesis [GO:0006412]       1.84297e-14    RPL19B RPS8A RPL23A RPS11B RPL19A TEF2 RPS6B RPS9B RPL21A SRO9 PSA1 RPS29B RPL31A RPL13A RPS16B RPP1B RPL41B RPL35B RPL41A PPH22 RPL35A SSB1 KRS1 RPS13 RPL12B RPS17B RPS18A RPL27B RPL37B RPL12A RPL34A RPS24A RPS8B RPL23B RPS26B CCA1 FRS2 RPL22B RPL2A RPL30 RPL24A RPL28 RPS2 RPL1B RPS26A RPS25A RPL26B RPL11B RPS23A RPS0A RPL14B RPL8A RPS27B RPL42B RPS4B RPL2B RPL16A RPL40A RPS21B RPL39 RPS22A RPS14B RPS5 RPS4A RPL14A RPS27A RPL17A RPS21A RPL40B RPS0B RPL22A RPL10 RPS31 RPS30A RPS25B RPL26A RPS29A RPS1A RPL6B RPS17A YML025C RPS18B RPS1B RPL6A SEC59 RPL13B RPS16A RPL36A RPS10B RPL20A RPL9B RPL16B RPS7B RPS19B RPP2A RPS15 RPS19A RPL25 RPS7A RPL33B RPS10A RPL20B RPS12 RPS9A RPS6A RPL5 RPL33A RPL7B RPL1A RPL36B RPL43A TEF1 RPL11A             113      415

macromolecule biosynthesis [GO:0009059]      2.76446e-14    RPL19B SKT5 RPS8A RPL23A RPS11B RPL19A TEF2 RPS6B RPS9B RPL21A SRO9 PSA1 RPS29B RPL31A RPL13A RPS16B RPP1B RPL41B RPL35B RPL41A PPH22 RPL35A SSB1 KRS1 RPS13 RPL12B RPS17B RPS18A RPL27B RPL37B RPL12A RPL34A RPS24A RPS8B RPL23B RPS26B CCA1 FRS2 RPL22B RPL2A RPL30 RPL24A RPL28 RPS2 RPL1B RPS26A RPS25A RPL26B RPL11B RPS23A RPS0A RPL14B RPL8A RPS27B RPL42B CHS7 RPS4B RPL2B RPL16A RPL40A RPS21B RPL39 RPS22A RPS14B RPS5 RPS4A RPL14A RPS27A RPL17A RPS21A RPL40B RPS0B RPL22A RPL10 RPS31 RPS30A RPS25B RPL26A RPS29A RPS1A RPL6B RPS17A YML025C RPS18B RPS1B RPL6A SEC59 RPL13B RPS16A RPL36A RPS10B RPL20A RPL9B RPL16B RPS7B RPS19B RPP2A RPS15 RPS19A RPL25 RPS7A RPL33B RPS10A RPL20B RPS12 RPS9A RPS6A RPL5 RPL33A RPL7B RPL1A RPL36B RPL43A TEF1 RPL11A          115      422

ribosomal subunit assembly [GO:0042257]       1.66236e-11    RPS11B RPL12B RPS17B RPL12A RPL11B RPS0A RPS14B RPS0B RPL10 RPS31 RPL6B RPS17A YML025C RPL6A RPL25 RPL5 RPL11A           17        48

ribosome assembly [GO:0042255]       3.54407e-11    RPS11B RPL12B RPS17B RPL12A RPL11B RPS0A RPS14B RPS0B RPL10 RPS31 RPL6B RPS17A YML025C RPL6A RPL25 RPL5 RPL11A 17        50

ribosomal small subunit assembly and maintenance [GO:0000028]         5.98385e-07    RPS11B RPS17B RPS0A RPS14B RPS0B RPS31 RPS17A       7          13

ribosome biogenesis and assembly [GO:0042254]        1.91314e-06    POP5 RPS11B TSR1 UTP4 RPL12B RPS17B UTP6 RPL12A RPL30 RPL11B RPS0A RPS14B RPS0B RPL10 RPS31 RPL6B RPS17A YML025C RPL6A RRP5 RPL25 RPL5 RPL11A            23        165

ribosomal large subunit assembly and maintenance [GO:0000027]         2.68882e-06    RPL12B RPL12A RPL11B RPL10 RPL6B YML025C RPL6A RPL25 RPL5 RPL11A     10        35

regulation of translational fidelity [GO:0006450]            4.1283e-06      RPS11B RPS9B RPS2 RPS23A RPS9A         5            7

 

 

 

GO Cellular Component

Category          p-value In Category from Cluster          k          f

cytosolic small ribosomal subunit (sensu Eukarya) [GO:0005843]          1e-14   RPS8A RPS11B RPS6B RPS9B RPS29B RPS16B RPS13 RPS17B RPS18A RPS24A RPS8B RPS26B RPS2 RPS26A RPS25A RPS23A RPS0A RPS27B RPS4B RPS21B RPS22A RPS14B RPS5 RPS4A RPS27A RPS21A RPS0B RPS31 RPS30A RPS25B RPS29A RPS1A RPS17A RPS18B RPS1B RPS16A RPS10B RPS7B RPS19B RPS15 RPS19A RPS7A RPS10A RPS12 RPS9A RPS6A            46        61

eukaryotic 48S initiation complex [GO:0016283]          1e-14   RPS8A RPS11B RPS6B RPS9B RPS29B RPS16B RPS13 RPS17B RPS18A RPS24A RPS8B RPS26B RPS2 RPS26A RPS25A RPS23A RPS0A RPS27B RPS4B RPS21B RPS22A RPS14B RPS5 RPS4A RPS27A RPS21A RPS0B RPS31 RPS30A RPS25B RPS29A RPS1A RPS17A RPS18B RPS1B RPS16A RPS10B RPS7B RPS19B RPS15 RPS19A RPS7A RPS10A RPS12 RPS9A RPS6A            46        61

eukaryotic 43S pre-initiation complex [GO:0016282]    1e-14   RPS8A RPS11B RPS6B RPS9B RPS29B RPS16B RPS13 RPS17B RPS18A RPS24A RPS8B RPS26B RPS2 RPS26A RPS25A RPS23A RPS0A RPS27B RPS4B RPS21B RPS22A RPS14B RPS5 RPS4A RPS27A RPS21A RPS0B RPS31 RPS30A RPS25B RPS29A RPS1A RPS17A RPS18B RPS1B RPS16A RPS10B RPS7B RPS19B RPS15 RPS19A RPS7A RPS10A RPS12 RPS9A RPS6A            46        67

cytosolic ribosome (sensu Eukarya) [GO:0005830]       1e-14   RPL19B RPS8A RPL23A RPS11B RPL19A RPS6B RPS9B RPL21A RPS29B RPL31A RPL13A RPS16B RPP1B RPL41B RPL35B RPL41A RPL35A RPS13 RPL12B RPS17B RPS18A RPL27B RPL37B RPL12A RPL34A RPS24A RPS8B RPL23B RPS26B RPL22B RPL2A RPL30 RPL24A RPL28 RPS2 RPL1B RPS26A RPS25A RPL26B RPL11B RPS23A RPS0A RPL14B RPL8A RPS27B RPL42B RPS4B RPL2B RPL16A RPL40A RPS21B RPL39 RPS22A RPS14B RPS5 RPS4A RPL14A RPS27A RPL17A RPS21A RPL40B RPS0B RPL22A RPL10 RPS31 RPS30A RPS25B RPL26A RPS29A RPS1A RPL6B RPS17A RPS18B RPS1B RPL6A RPL13B RPS16A RPL36A RPS10B RPL20A RPL9B RPL16B RPS7B RPS19B RPP2A RPS15 RPS19A RPL25 RPS7A RPL33B RPS10A RPL20B RPS12 RPS9A RPS6A RPL5 RPL33A RPL7B RPL1A RPL36B RPL43A RPL11A    102      151

cytosolic large ribosomal subunit (sensu Eukarya) [GO:0005842]          1e-14   RPL19B RPL23A RPL19A RPL21A RPL31A RPL13A RPP1B RPL41B RPL35B RPL41A RPL35A RPL12B RPL27B RPL37B RPL12A RPL34A RPL23B RPL22B RPL2A RPL30 RPL24A RPL28 RPL1B RPL26B RPL11B RPL14B RPL8A RPL42B RPL2B RPL16A RPL40A RPL39 RPL14A RPL17A RPL40B RPL22A RPL10 RPL26A RPL6B RPL6A RPL13B RPL36A RPL20A RPL9B RPL16B RPP2A RPL25 RPL33B RPL20B RPL5 RPL33A RPL7B RPL1A RPL36B RPL43A RPL11A      56            83

small ribosomal subunit [GO:0015935] 1e-14   RPS8A RPS11B RPS6B RPS9B RPS29B RPS16B RPS13 RPS17B RPS18A RPS24A RPS8B RPS26B RPS2 RPS26A RPS25A RPS23A RPS0A RPS27B RPS4B RPS21B RPS22A RPS14B RPS5 RPS4A RPS27A RPS21A RPS0B RPS31 RPS30A RPS25B RPS29A RPS1A RPS17A RPS18B RPS1B RPS16A RPS10B RPS7B RPS19B RPS15 RPS19A RPS7A RPS10A RPS12 RPS9A RPS6A         46        88

large ribosomal subunit [GO:0015934]  1e-14   RPL19B RPL23A RPL19A RPL21A RPL31A RPL13A RPP1B RPL41B RPL35B RPL41A RPL35A RPL12B RPL27B RPL37B RPL12A RPL34A RPL23B RPL22B RPL2A RPL30 RPL24A RPL28 RPL1B RPL26B RPL11B RPL14B RPL8A RPL42B RPL2B RPL16A RPL40A RPL39 RPL14A RPL17A RPL40B RPL22A RPL10 RPL26A RPL6B YML025C RPL6A RPL13B RPL36A RPL20A RPL9B RPL16B RPP2A RPL25 RPL33B RPL20B RPL5 RPL33A RPL7B RPL1A RPL36B RPL43A RPL11A          57        122

ribosome [GO:0005840]          1e-14   RPL19B RPS8A RPL23A RPS11B RPL19A TEF2 RPS6B RPS9B RPL21A SRO9 RPS29B RPL31A RPL13A RPS16B RPP1B RPL41B RPL35B RPL41A RPL35A SSB1 RPS13 RPL12B RPS17B RPS18A RPL27B RPL37B RPL12A RPL34A RPS24A RPS8B RPL23B RPS26B RPL22B RPL2A RPL30 RPL24A RPL28 RPS2 RPL1B RPS26A RPS25A RPL26B RPL11B RPS23A RPS0A RPL14B RPL8A RPS27B RPL42B RPS4B RPL2B RPL16A RPL40A RPS21B RPL39 RPS22A RPS14B RPS5 RPS4A RPL14A RPS27A RPL17A RPS21A RPL40B RPS0B RPL22A RPL10 RPS31 RPS30A RPS25B RPL26A RPS29A RPS1A RPL6B RPS17A YML025C RPS18B RPS1B RPL6A RPL13B RPS16A RPL36A RPS10B RPL20A RPL9B RPL16B RPS7B RPS19B RPP2A RPS15 RPS19A RPL25 RPS7A RPL33B RPS10A RPL20B RPS12 RPS9A RPS6A RPL5 RPL33A RPL7B RPL1A RPL36B RPL43A TEF1 RPL11A      107      258

cytosol [GO:0005829] 1e-14   RPL19B RPS8A RPL23A RPS11B RPL19A RPS6B RPS9B RPL21A RPS29B RPL31A RPL13A RPS16B RPP1B RPL41B RPL35B RPL41A RPL35A RPS13 RPL12B RPS17B RPS18A RPL27B RPL37B RPL12A RPL34A RPS24A RPS8B RPL23B RPS26B RPL22B RPL2A RPL30 RPL24A RPL28 RPS2 RPL1B RPS26A RPS25A RPL26B RPL11B RPS23A TDH3 RPS0A RPL14B RPL8A RPS27B RPL42B RPS4B RPL2B RPL16A RPL40A RPS21B RPL39 RPS22A RPS14B RPS5 RPS4A RPL14A RPS27A RPL17A RPS21A RPL40B RPS0B RPL22A RPL10 RPS31 RPS30A RPS25B RPL26A RPS29A RPS1A RPL6B RPS17A RPS18B RPS1B RPL6A RPL13B RPS16A RPL36A RPS10B RPL20A RPL9B RPL16B RPS7B RPS19B RPP2A RPS15 GPD2 RPS19A RPL25 NOB1 RPS7A RPL33B RPS10A CPA1 RPL20B VTS1 RPS12 RPS9A RPS6A RPL5 RPL33A RPL7B RPL1A RPL36B RPL43A RPL11A PRE2      108      310

cytoplasm [GO:0005737]         1e-14   PIM1 RPL19B SKT5 RPS8A RPL23A RPS11B RPL19A AAC3 TEF2 FZO1 RPS6B RPS9B RPL21A SRO9 GPD1 PSA1 RPS29B RPL31A RPL13A RPS16B RPP1B RPL41B RPL35B RPL41A RPL35A SSB1 KRS1 RPS13 SHE9 RPL12B RPS17B RPS18A UGO1 RPL27B RPL37B GEA2 RPL12A RPL34A RPS24A AST2 RPS8B RPL23B RPS26B CCA1 FRS2 RPL22B RPL2A RPL30 RPL24A RCS1 MPS2 RPL28 SNF4 RPS2 RPL1B MRM2 RPS26A RPS25A RPL26B RPL11B RPS23A TDH3 RPS0A RPL14B RPL8A RPS27B YHR033W RPL42B CHS7 RPS4B MNL1 RPL2B RPL16A RPL40A LCB3 RPS21B RPL39 RPS22A RPS14B APS2 RPS5 RPS4A SFT1 RPL14A RPS27A ZRT3 LST4 RPL17A RPS21A RPL40B UBI4 RPS0B RPL22A RPL10 SEC10 RPS31 CTS1 RPS30A RPS25B RPL26A RPS29A YLR437C CAR2 RPS1A VMA6 RPL6B RPS17A YML025C RPS18B RPS1B TEM1 RPL6A ERG5 ASC1 RPL13B RPS16A RPL36A RPS10B PEP5 RPL20A ZRC1 RPL9B RPL16B RPS7B RPS19B RPP2A RPS15 GPD2 CVT19 RPS19A RPL25 PFK27 NOB1 RPS7A UBP2 RPL33B RPS10A CPA1 RPL20B VTS1 RPS12 RPS9A RPS6A RPL5 RPL33A RPL7B RPL1A RPL36B APL4 RPL43A TEF1 RPL11A PRE2 COG4             154      1810

intracellular [GO:0005622]       1e-14   POP5 OAF1 PIM1 RPL19B SKT5 RPS8A RPL23A RPS11B RPL19A AAC3 TEF2 FZO1 RPS6B NTC20 RPS9B RPL21A AGP1 SRO9 GPD1 PSA1 TSR1 RPS29B RPL31A RPL13A RPS16B RPP1B RPL41B RPL35B RPL41A RPL35A SSB1 KRS1 RPS13 PMP3 CFT1 UTP4 YCG1 SHE9 SIZ1 RPL12B RPS17B ADA2 UTP6 RPS18A UGO1 RPL27B RPL37B GCN4 GEA2 RPL12A ACA1 RPL34A RPS24A AST2 RPS8B SLX8 RPL23B RPS26B CCA1 RPH1 GAT1 FRS2 EPL1 RPL22B RPL2A RPL30 RPL24A RCS1 HSF1 MPS2 RPL28 SNF4 RPS2 RPL1B MRM2 RPS26A RPS25A RPL26B RPL11B RPS23A RNR4 TDH3 RPS0A RPL14B RPL8A RPS27B YHR033W HXT5 RPL42B CHS7 RPS4B MNL1 RPL2B RPL16A RPL40A MLP2 SIP4 DPB11 LCB3 RPS21B RPL39 RPS22A RPS14B APS2 RPS5 RPS4A SFT1 RPL14A RPS27A ZRT3 LST4 STE3 RPL17A RPS21A SRP40 PTR2 RPL40B MLP1 UBI4 RPS0B RPL22A BUD20 RPL10 CDC45 SEC10 RPS31 HAP1 CTS1 RPS30A RPS25B RPL26A RPS29A BDF1 YLR437C CAR2 RPS1A VMA6 RPL6B RPS17A YML025C RPS18B RPS1B TEM1 RPL6A BUD22 ERG5 ASC1 RPL13B RPS16A YMR144W RPL36A RRP5 RPS10B PEP5 RPL20A ZRC1 RPL9B FKH2 RPL16B RPS7B MEP2 YCK2 RAP1 CAF40 RPS19B RPP2A RPS15 GPD2 CVT19 RPS19A RPL25 PFK27 NOB1 SGT1 RPS7A UBP2 RPL33B RPS10A CPA1 RPL20B RPA43 RPA190 VTS1 RPS12 SWI1 RPS9A MOT1 RPS6A RPL5 RPL33A RPL7B RPL1A RPL36B APL4 RPL43A TEF1 RPL11A PRE2 COG4 RPC40 SGV1 201      2921

cell [GO:0005623]       1e-14   POP5 OAF1 PIM1 RPL19B SKT5 AST1 RPS8A RPL23A RPS11B RPL19A AAC3 TEF2 FZO1 RPS6B NTC20 RPS9B RPL21A KCC4 AGP1 HIS4 SRO9 GPD1 PSA1 TSR1 RPS29B RPL31A RPL13A RPS16B RPP1B RPL41B RPL35B RPL41A RPL35A SSB1 KRS1 RPS13 PMP3 CFT1 UTP4 YCG1 SHE9 SIZ1 RPL12B RPS17B ADA2 UTP6 RPS18A UGO1 RPL27B RPL37B GCN4 GEA2 RPL12A ACA1 RPL34A RPS24A AST2 RPS8B SLX8 RPL23B RPS26B CCA1 RPH1 GAT1 FRS2 EPL1 RPL22B RPL2A RPL30 RPL24A RCS1 HSF1 MPS2 GUP1 RPL28 SNF4 RPS2 RPL1B MRM2 RPS26A RPS25A RPL26B RPL11B RPS23A RNR4 TDH3 RTA1 RPS0A RPL14B RPL8A RPS27B YHR033W HXT5 RPL42B CHS7 RPS4B MNL1 RPL2B RPL16A RPL40A MLP2 SIP4 DPB11 LCB3 RPS21B RPL39 RPS22A RPS14B APS2 RPS5 RPS4A SFT1 RPL14A RPS27A ZRT3 LST4 STE3 RPL17A RPS21A SRP40 PTR2 RPL40B MLP1 UBI4 RPS0B RPL22A BUD20 RPL10 CDC45 SEC10 RPS31 HAP1 CTS1 RPS30A RPS25B RPL26A RPS29A BDF1 YLR437C CAR2 RPS1A VMA6 RPL6B RPS17A YML025C RPS18B RPS1B TEM1 RPL6A SEC59 BUD22 ERG5 ASC1 RPL13B RPS16A YMR144W RPL36A RRP5 RPS10B PEP5 RPL20A ZRC1 RPL9B FKH2 RPL16B RPS7B MEP2 YCK2 RAP1 CAF40 RPS19B RPP2A RPS15 GPD2 CVT19 RPS19A RPL25 PFK27 NOB1 SGT1 RPS7A UBP2 RPL33B RPS10A CPA1 RPL20B RPA43 RPA190 VTS1 RPS12 SWI1 RPS9A MOT1 RPS6A RPL5 RPL33A RPL7B RPL1A RPL36B APL4 RPL43A TEF1 RPL11A PRE2 COG4 RPC40 SGV1    207      3106

ribonucleoprotein complex [GO:0030529]        1.32117e-14    POP5 RPL19B RPS8A RPL23A RPS11B RPL19A TEF2 RPS6B NTC20 RPS9B RPL21A SRO9 RPS29B RPL31A RPL13A RPS16B RPP1B RPL41B RPL35B RPL41A RPL35A SSB1 RPS13 UTP4 RPL12B RPS17B UTP6 RPS18A RPL27B RPL37B RPL12A RPL34A RPS24A RPS8B RPL23B RPS26B RPL22B RPL2A RPL30 RPL24A RPL28 RPS2 RPL1B RPS26A RPS25A RPL26B RPL11B RPS23A RPS0A RPL14B RPL8A RPS27B RPL42B RPS4B RPL2B RPL16A RPL40A RPS21B RPL39 RPS22A RPS14B RPS5 RPS4A RPL14A RPS27A RPL17A RPS21A RPL40B RPS0B RPL22A RPL10 RPS31 RPS30A RPS25B RPL26A RPS29A RPS1A RPL6B RPS17A YML025C RPS18B RPS1B RPL6A RPL13B RPS16A RPL36A RRP5 RPS10B RPL20A RPL9B RPL16B RPS7B RPS19B RPP2A RPS15 RPS19A RPL25 RPS7A RPL33B RPS10A RPL20B RPS12 RPS9A RPS6A RPL5 RPL33A RPL7B RPL1A RPL36B RPL43A TEF1 RPL11A             112      380

 

 

 

SMART Domains

Category          p-value In Category from Cluster          k          f

 

 

 

PFam-A Domains

Category          p-value In Category from Cluster          k          f

PF00467 (KOW)        2.87605e-07    RPL27B RPL26B RPL14B RPS4B RPS4A RPL14A RPL26A           7          12

 

 

 

Yeast Two Hybrid - Uetz

Category          p-value In Category from Cluster          k          f

 

 

 

Yeast Two Hybrid - Ito (core)

Category          p-value In Category from Cluster          k          f

 

 

 

Yeast Two Hybrid - Ito (full)

Category          p-value In Category from Cluster          k          f

 

 

 

Synthetic Genetic Array Analysis

Category          p-value In Category from Cluster          k          f

 

 

 

MDS Proteomics Complexes

Category          p-value In Category from Cluster          k          f

 

 

 

Cellzome Complexes

Category          p-value In Category from Cluster          k          f

YBR031W (RPL4A)   1e-14   RPL13A RPL12B RPL27B RPL28 RPL11B RPL2B RPS14B RPL17A RPL10 RPL6A RPL13B RPL20A RPL16B RPL25 RPL20B RPL33A RPL7B RPL36B         18        39

 

 

 

Proteome Localization--Observed

Category          p-value In Category from Cluster          k          f

cyto      0.000222426   FUN19 OAF1 RPL19B YBL029C-A RPS8A RPL19A TEF2 RPS6B AGP1 HIS4 GPD1 PSA1 RPL31A RPL13A SFA1 RPL41A PPH22 SSB1 KRS1 PRO1 RPS17B RPS18A YEL007W GEA2 ZRG8 YER034W AST2 RPL23B RPS26B FRS2 BUD27 RPL22B RPL24A SNF4 RPS2 RPL1B RPS26A RPL26B RPL11B YGR117C RPS23A TDH3 RPL8A YHR033W RHR2 RPL16A YJL049W RPS22A RPS5 HOM6 RPS4A SFT1 RPL14A RPS27A RPL17A UBI4 PDC1 RPL22A RPL10 RPS31 RPS30A RPL26A YLR437C CAR2 ASC1 RPS16A YNL010W YNL011C RPL9B RPL16B RPS7B RPS15 MAM3 YOL109W RPL25 YGK3 PFK27 WHI2 VTS1 RPS9A RPL5 RPL7B YPL199C CSR2 PUF2 TEF1 RPL11A            87        1324

 

 

 

Proteome Localization--Predicted+Observed

Category          p-value In Category from Cluster          k          f

cyt        1.27576e-06    FUN19 OAF1 RPL19B YBL029W YBL060W SKT5 AST1 RPS8A RPL23A RPS11B AAC3 TKL2 TEF2 FZO1 DTR1 RPS6B RPS9B RPL21A AGP1 HIS4 SRO9 GPD1 PSA1 TSR1 RPS29B RPL31A RXT3 RPL13A RPS16B RPP1B YDL133W RPL35B SFA1 UGX2 RPL41A YDL186W PPH22 RPL35A SSB1 KRS1 RPS13 PMP3 PRO1 ADE8 RPL12B RPS17B UTP6 RPS18A UGO1 RPL27B RPL37B YEL007W GEA2 YEL023C RPL12A ZRG8 YER034W SPO73 RPS24A AST2 RPS8B SLX8 RPL23B RPS26B FRS2 BUD27 RPL30 RPL24A RPL28 RPS2 MON1 RPL1B RPS26A RPS25A YGR033C RPL26B RPL11B YGR117C RPS23A TDH3 RPS0A RPL14B RPL8A RPS27B YHR033W HXT5 YHR122W RPL42B CHS7 RPS4B MNL1 RPL2B RHR2 YIL055C RPL16A RPL40A YJL049W SIP4 RPS21B RPL39 RPS22A RPS14B RPS5 HOM6 RPS4A RPL14A RPS27A RPL17A RPS21A PTR2 RPL40B UBI4 PDC1 RPS0B RPL22A RPL10 RPS31 YLR254C RPS25B RPL26A YLR387C RPS29A YLR437C CAR2 RPS1A VMA6 RPL6B RPS17A RPS18B RPS1B RPL6A ASC1 RPL13B RPS16A RPL36A RPS10B PEP5 RPL20A YMR265C YNL010W YNL011C RPL9B RPL16B RPS7B YNL101W MEP2 YNL144C YCK2 CAF40 RPS19B RPP2A RPS15 YOL109W RPS19A RPL25 YGK3 PFK27 WHI2 SGT1 RKI1 RPS7A UBP2 YOR161C YOR179C RPL33B YOR292C RPS10A CPA1 RPL20B VTS1 SCP1 RPS12 YPL017C RPS9A RPS6A RPL5 RPL33A YPL162C RPL7B YPL199C RPL1A CSR2 PUF2 RPL43A TEF1 RPL11A PRE2 COG4 DBF20   189      3210

 

 

 

Deletions Consortium (Essentiality, Morphology)

Category          p-value In Category from Cluster          k          f

 

 

 

Yeast Fitness Data

Category          p-value In Category from Cluster          k          f

Slow Growers  1.17575e-06    RPL19B RPS11B RPL19A FZO1 RPS6B RPS9B RPL21A RPS29B RPL31A RPL35A PMP3 PRO1 RPL12B RPS18A RPL34A RPS24A SLX8 RPL23B BUD27 RCS1 GUP1 SNF4 RPL1B RPS23A RNR4 RPS27B RPS4B RPS21B RPL39 RPS4A RPL14A SRP40 PDC1 YLR047C RPL22A BUD20 BDF1 VMA6 RPL6B RPS17A RPS1B RPL6A BUD22 ASC1 RPL13B RPS16A RSN1 RPL16B RPS19B RPS19A RPS7A RPS10A YPL017C RPS6A RPL43A     55        617

 

 

 

Published Complexes

Category          p-value In Category from Cluster          k          f

Andersen et al. (2002) - Curr Bio 12:1-            4.38205e-13    RPS6B RPS9B RPL31A RPS13 RPL12B RPL27B RPS8B RPL28 RPL1B RPL26B RPL11B RPS0A RPL14B RPL2B RPL16A RPS5 RPS4A RPL17A SRP40 UBI4 RPL22A RPL6B RPS18B RPS1B RPL13B RPS16A RRP5 RPL9B RPL25 RPA190 RPS12 RPL5 RPC40 33        165

Harnicharnpai et al. (2001) - Mol Cell 8:505-   0.000805155   SSB1 RPS2 TDH3 RPS22A RPL10 RPS15 RPL5      7            34


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Rap1-PBMandLeeORLiebChIP-2SD.FunSpec.txt

Input Cluster (n=217)

YAL033W       POP5

YAL034C        FUN19

YBL022C        PIM1

YBL027W       RPL19B

YBL028C

YBL029C-A

YBL029W

YBL060W

YBL061C        SKT5

YBL069W       AST1

YBL071W-A   KTI11

YBL072C        RPS8A

YBR048W       RPS11B

YBR117C        TKL2

YBR118W       TEF2

YBR179C        FZO1

YBR180W       DTR1

YBR181C        RPS6B

YBR188C        NTC20

YBR189W       RPS9B

YCL024W       KCC4

YCL025C        AGP1

YCL030C        HIS4

YCL036W       GFD2

YCL037C        SRO9

YDL022W       GPD1

YDL060W       TSR1

YDL061C        RPS29B

YDL075W       RPL31A

YDL076C        RXT3

YDL082W       RPL13A

YDL083C        RPS16B

YDL130W       RPP1B

YDL133C-A   RPL41B

YDL133W

YDL136W       RPL35B

YDL184C        RPL41A

YDL186W

YDL188C        PPH22

YDL191W       RPL35A

YDL229W       SSB1

YDR036C

YDR037W      KRS1

YDR276C       PMP3

YDR300C       PRO1

YDR301W      CFT1

YDR393W      SHE9

YDR408C       ADE8

YDR409W      SIZ1

YDR418W      RPL12B

YDR447C       RPS17B

YDR448W      ADA2

YDR449C       UTP6

YDR450W      RPS18A

YDR470C       UGO1

YDR471W      RPL27B

YDR500C       RPL37B

YDR501W      PLM2

YEL007W

YEL009C        GCN4

YEL022W       GEA2

YEL023C

YEL054C        RPL12A

YER033C        ZRG8

YER034W

YER056C-A    RPL34A

YER074W       RPS24A

YER101C        AST2

YER102W       RPS8B

YER116C        SLX8

YER117W       RPL23B

YER168C        CCA1

YER169W       RPH1

YFL023W       BUD27

YFL024C        EPL1

YFR031C-A    RPL2A

YGL030W       RPL30

YGL031C        RPL24A

YGL073W       HSF1

YGL075C        MPS2

YGL083W       SCY1

YGL084C        GUP1

YGL103W       RPL28

YGL104C        VPS73

YGL115W       SNF4

YGL123W       RPS2

YGL124C        MON1

YGL189C        RPS26A

YGR027C       RPS25A

YGR033C

YGR034W      RPL26B

YGR085C       RPL11B

YGR117C

YGR118W      RPS23A

YGR192C       TDH3

YHL001W       RPL14B

YHL033C        RPL8A

YHR021C       RPS27B

YHR021W-A  ECM12

YHR033W

YHR096C       HXT5

YHR122W

YHR141C       RPL42B

YHR142W      CHS7

YHR203C       RPS4B

YHR204W      MNL1

YIL018W        RPL2B

YIL053W        RHR2

YIL055C

YIL148W        RPL40A

YIL149C         MLP2

YJL049W

YJL089W        SIP4

YJL090C         DPB11

YJL134W        LCB3

YJL136C         RPS21B

YJL189W        RPL39

YJL190C         RPS22A

YJL191W        RPS14B

YJL192C

YJR058C         APS2

YJR059W        PTK2

YJR123W        RPS5

YJR139C         HOM6

YKL006C-A   SFT1

YKL006W      RPL14A

YKL156W      RPS27A

YKL178C       STE3

YKL180W      RPL17A

YKR057W      RPS21A

YKR094C       RPL40B

YKR095W      MLP1

YLL039C        UBI4

YLR044C        PDC1

YLR047C

YLR048W       RPS0B

YLR061W       RPL22A

YLR074C        BUD20

YLR075W       RPL10

YLR286C        CTS1

YLR333C        RPS25B

YLR387C

YLR388W       RPS29A

YLR390W-A   CCW14

YLR399C        BDF1

YLR437C

YLR438W       CAR2

YLR447C        VMA6

YLR448W       RPL6B

YML024W      RPS17A

YML025C

YML026C       RPS18B

YML073C       RPL6A

YMR013C       SEC59

YMR013W-A

YMR014W      BUD22

YMR015C       ERG5

YMR116C       ASC1

YMR142C       RPL13B

YMR143W      RPS16A

YMR144W

YMR194W      RPL36A

YMR229C       RRP5

YMR230W      RPS10B

YMR231W      PEP5

YMR242C       RPL20A

YMR243C       ZRC1

YMR244W

YNL010W

YNL011C

YNL069C       RPL16B

YNL101W

YNL154C       YCK2

YNL216W      RAP1

YNL253W

YNL254C

YNL302C       RPS19B

YOL039W      RPP2A

YOL040C       RPS15

YOL059W      GPD2

YOL060C       MAM3

YOL109W

YOL121C       RPS19A

YOL127W      RPL25

YOL128C       YGK3

YOL136C       PFK27

YOR043W      WHI2

YOR056C       NOB1

YOR057W      SGT1

YOR095C       RKI1

YOR096W      RPS7A

YOR124C       UBP2

YOR292C

YOR293W      RPS10A

YOR312C       RPL20B

YOR338W

YOR340C       RPA43

YOR341W      RPA190

YOR365C

YOR367W      SCP1

YOR369C       RPS12

YPL081W       RPS9A

YPL082C        MOT1

YPL090C        RPS6A

YPL131W       RPL5

YPL143W       RPL33A

YPL198W       RPL7B

YPL199C

YPL220W       RPL1A

YPR080W       TEF1

YPR102C        RPL11A

YPR103W       PRE2

YPR105C        COG4

YPR106W       ISR1

YPR110C        RPC40

YPR111W       DBF20

YPR161C        SGV1

 

Genes Not Found:

 

SNR17B

SNR34

SNR62

SNR72

SNR73

SNR74

SNR75

SNR76

SNR77

SNR78

TE%28UUC%29L

YBL071C-B

YGL188C-A

YGR027W-A

YGR027W-B

YLR264C-A

YMR230W-A

YMR242W-A

MIPS Functional Classification

Category          p-value In Category from Cluster          k          f

ribosome biogenesis      1e-14   RPL19B RPS8A RPS11B RPS6B RPS9B RPS29B RPL31A RPL13A RPS16B RPP1B RPL41B RPL35B RPL41A RPL35A RPL12B RPS17B RPS18A RPL27B RPL37B RPL12A RPL34A RPS24A RPS8B RPL23B RPL2A RPL30 RPL24A RPL28 RPS2 RPS26A RPS25A RPL26B RPL11B RPS23A RPL14B RPL8A RPS27B RPL42B RPS4B RPL2B RPL40A RPS21B RPL39 RPS22A RPS14B RPS5 RPL14A RPS27A RPL17A RPS21A RPL40B RPS0B RPL22A RPL10 RPS25B RPS29A RPL6B RPS17A YML025C RPS18B RPL6A ASC1 RPL13B RPS16A RPL36A RPS10B RPL20A RPL16B RPS19B RPP2A RPS15 RPS19A RPL25 RPS7A RPS10A RPL20B RPS12 RPS9A RPS6A RPL5 RPL33A RPL7B RPL1A RPL11A    84        215

PROTEIN SYNTHESIS          1e-14   RPL19B RPS8A RPS11B TEF2 RPS6B RPS9B RPS29B RPL31A RPL13A RPS16B RPP1B RPL41B RPL35B RPL41A RPL35A SSB1 KRS1 RPL12B RPS17B RPS18A RPL27B RPL37B RPL12A RPL34A RPS24A RPS8B RPL23B RPL2A RPL30 RPL24A RPL28 RPS2 RPS26A RPS25A RPL26B RPL11B RPS23A RPL14B RPL8A RPS27B RPL42B RPS4B RPL2B RPL40A RPS21B RPL39 RPS22A RPS14B RPS5 RPL14A RPS27A RPL17A RPS21A RPL40B UBI4 RPS0B RPL22A RPL10 RPS25B RPS29A RPL6B RPS17A YML025C RPS18B RPL6A ASC1 RPL13B RPS16A RPL36A RPS10B RPL20A RPL16B RAP1 RPS19B RPP2A RPS15 RPS19A RPL25 RPS7A RPS10A RPL20B RPS12 RPS9A RPS6A RPL5 RPL33A RPL7B RPL1A TEF1 RPL11A             90        359

cytoplasm         1e-14   RPL19B RPS8A RPS11B TKL2 TEF2 RPS6B RPS9B GPD1 RPS29B RPL31A RPL13A RPS16B RPP1B RPL41B RPL35B RPL41A RPL35A SSB1 KRS1 PRO1 ADE8 RPL12B RPS17B RPS18A RPL27B RPL37B RPL12A RPL34A RPS24A RPS8B RPL23B CCA1 RPL30 RPL24A RPL28 RPS2 RPS26A RPS25A RPL26B RPL11B RPS23A TDH3 RPL14B RPL8A RPS27B RPL42B RPS4B RPL2B RPL40A RPS21B RPL39 RPS22A RPS14B RPS5 RPL14A RPS27A RPL17A RPS21A RPL40B UBI4 PDC1 RPS0B RPL10 RPS25B RPS29A CAR2 RPL6B RPS17A RPS18B RPL6A ASC1 RPL13B RPS16A RPL36A RPS10B RPL20A RPL16B RPS19B RPP2A RPS15 RPS19A RPL25 RKI1 RPS7A UBP2 RPS10A RPL20B RPS12 RPS9A RPS6A RPL5 RPL33A RPL7B RPL1A TEF1 RPL11A           96        554

SUBCELLULAR LOCALISATION   1e-14   POP5 PIM1 RPL19B RPS8A RPS11B TKL2 TEF2 FZO1 RPS6B RPS9B KCC4 AGP1 GPD1 RPS29B RPL31A RPL13A RPS16B RPP1B RPL41B RPL35B RPL41A RPL35A SSB1 KRS1 PRO1 CFT1 ADE8 RPL12B RPS17B ADA2 RPS18A RPL27B RPL37B GCN4 GEA2 RPL12A RPL34A RPS24A RPS8B RPL23B CCA1 RPL30 RPL24A HSF1 MPS2 RPL28 SNF4 RPS2 RPS26A RPS25A RPL26B RPL11B RPS23A TDH3 RPL14B RPL8A RPS27B HXT5 RPL42B CHS7 RPS4B RPL2B RPL40A MLP2 SIP4 DPB11 RPS21B RPL39 RPS22A RPS14B APS2 RPS5 SFT1 RPL14A RPS27A STE3 RPL17A RPS21A RPL40B MLP1 UBI4 PDC1 RPS0B RPL10 CTS1 RPS25B RPS29A BDF1 CAR2 VMA6 RPL6B RPS17A YML025C RPS18B RPL6A SEC59 ERG5 ASC1 RPL13B RPS16A RPL36A RRP5 RPS10B PEP5 RPL20A ZRC1 RPL16B YCK2 RAP1 RPS19B RPP2A RPS15 GPD2 RPS19A RPL25 RKI1 RPS7A UBP2 RPS10A RPL20B RPA43 RPA190 RPS12 RPS9A MOT1 RPS6A RPL5 RPL33A RPL7B RPL1A TEF1 RPL11A PRE2 RPC40           134      2256

 

 

 

MIPS Phenotypes

Category          p-value In Category from Cluster          k          f

 

 

 

MIPS Subcellular Localization

Category          p-value In Category from Cluster          k          f

cytoplasm         1e-14   RPL19B RPS8A RPS11B TKL2 TEF2 RPS6B RPS9B SRO9 GPD1 RPS29B RPL31A RPL13A RPS16B RPP1B RPL41B RPL35B RPL41A RPL35A SSB1 KRS1 PRO1 ADE8 RPL12B RPS17B RPS18A RPL27B RPL37B RPL12A RPL34A RPS24A RPS8B RPL23B CCA1 RPL30 RPL24A RPL28 RPS2 RPS26A RPS25A RPL26B RPL11B RPS23A TDH3 RPL14B RPL8A RPS27B RPL42B RPS4B RPL2B RPL40A RPS21B RPL39 RPS22A RPS14B RPS5 RPL14A RPS27A RPL17A RPS21A RPL40B UBI4 PDC1 RPS0B RPL22A RPL10 RPS25B RPS29A CAR2 RPL6B RPS17A RPS18B RPL6A ASC1 RPL13B RPS16A RPL36A RPS10B RPL20A RPL16B RPS19B RPP2A RPS15 RPS19A RPL25 RKI1 RPS7A UBP2 RPS10A RPL20B RPS12 RPS9A RPS6A RPL5 RPL33A RPL7B RPL1A TEF1 RPL11A           98        593

 

 

 

MIPS Protein Complexes

Category          p-value In Category from Cluster          k          f

cytoplasmic ribosomal small subunit       1e-14   RPS8A RPS11B RPS6B RPS9B RPS29B RPS16B RPS17B RPS18A RPS24A RPS8B RPS2 RPS26A RPS25A RPS23A RPS27B RPS4B RPS21B RPS22A RPS14B RPS5 RPS27A RPS21A RPS0B RPS25B RPS29A RPS17A RPS18B ASC1 RPS16A RPS10B RPS19B RPS15 RPS19A RPS7A RPS10A RPS12 RPS9A RPS6A         38        57

Cytoplasmic ribosomes 1e-14   RPL19B RPS8A RPS11B RPS6B RPS9B RPS29B RPL31A RPL13A RPS16B RPP1B RPL41B RPL35B RPL41A RPL35A RPL12B RPS17B RPS18A RPL27B RPL37B RPL12A RPL34A RPS24A RPS8B RPL23B RPL2A RPL30 RPL24A RPL28 RPS2 RPS26A RPS25A RPL26B RPL11B RPS23A RPL14B RPL8A RPS27B RPL42B RPS4B RPL2B RPL40A RPS21B RPL39 RPS22A RPS14B RPS5 RPL14A RPS27A RPL17A RPS21A RPL40B RPS0B RPL22A RPL10 RPS25B RPS29A RPL6B RPS17A RPS18B RPL6A ASC1 RPL13B RPS16A RPL36A RPS10B RPL20A RPL16B RPS19B RPP2A RPS15 RPS19A RPL25 RPS7A RPS10A RPL20B RPS12 RPS9A RPS6A RPL5 RPL33A RPL7B RPL1A RPL11A       83        138

cytoplasmic ribosomal large subunit       1e-14   RPL19B RPL31A RPL13A RPP1B RPL41B RPL35B RPL41A RPL35A RPL12B RPL27B RPL37B RPL12A RPL34A RPL23B RPL2A RPL30 RPL24A RPL28 RPL26B RPL11B RPL14B RPL8A RPL42B RPL2B RPL40A RPL39 RPL14A RPL17A RPL40B RPL22A RPL10 RPL6B RPL6A RPL13B RPL36A RPL20A RPL16B RPP2A RPL25 RPL20B RPL5 RPL33A RPL7B RPL1A RPL11A         45        81

Translation complexes   1e-14   RPL19B RPS8A RPS11B TEF2 RPS6B RPS9B RPS29B RPL31A RPL13A RPS16B RPP1B RPL41B RPL35B RPL41A RPL35A RPL12B RPS17B RPS18A RPL27B RPL37B RPL12A RPL34A RPS24A RPS8B RPL23B RPL2A RPL30 RPL24A RPL28 RPS2 RPS26A RPS25A RPL26B RPL11B RPS23A RPL14B RPL8A RPS27B RPL42B RPS4B RPL2B RPL40A RPS21B RPL39 RPS22A RPS14B RPS5 RPL14A RPS27A RPL17A RPS21A RPL40B RPS0B RPL22A RPL10 RPS25B RPS29A RPL6B RPS17A RPS18B RPL6A ASC1 RPL13B RPS16A RPL36A RPS10B RPL20A RPL16B RPS19B RPP2A RPS15 RPS19A RPL25 RPS7A RPS10A RPL20B RPS12 RPS9A RPS6A RPL5 RPL33A RPL7B RPL1A TEF1 RPL11A       85        240

 

 

 

MIPS Protein Classes

Category          p-value In Category from Cluster          k          f

 

 

 

GO Molecular Function

Category          p-value In Category from Cluster          k          f

structural constituent of ribosome [GO:0003735]          1e-14   RPL19B RPS8A RPS11B RPS6B RPS9B RPS29B RPL31A RPL13A RPS16B RPP1B RPL41B RPL35B RPL41A RPL35A RPL12B RPS17B RPS18A RPL27B RPL37B RPL12A RPL34A RPS24A RPS8B RPL23B RPL2A RPL30 RPL24A RPL28 RPS2 RPS26A RPS25A RPL26B RPL11B RPS23A RPL14B RPL8A RPS27B RPL42B RPS4B RPL2B RPL40A RPS21B RPL39 RPS22A RPS14B RPS5 RPL14A RPS27A RPL17A RPS21A RPL40B RPS0B RPL22A RPL10 RPS25B RPS29A RPL6B RPS17A YML025C RPS18B RPL6A RPL13B RPS16A RPL36A RPS10B RPL20A RPL16B RPS19B RPP2A RPS15 RPS19A RPL25 RPS7A RPS10A RPL20B RPS12 RPS9A RPS6A RPL5 RPL33A RPL7B RPL1A RPL11A             83        206

structural molecule [GO:0005198]        1e-14   RPL19B RPS8A RPS11B RPS6B RPS9B RPS29B RPL31A RPL13A RPS16B RPP1B RPL41B RPL35B RPL41A RPL35A RPL12B RPS17B RPS18A RPL27B RPL37B RPL12A RPL34A RPS24A RPS8B RPL23B RPL2A RPL30 RPL24A MPS2 RPL28 RPS2 RPS26A RPS25A RPL26B RPL11B RPS23A RPL14B RPL8A RPS27B RPL42B RPS4B RPL2B RPL40A RPS21B RPL39 RPS22A RPS14B RPS5 RPL14A RPS27A RPL17A RPS21A RPL40B RPS0B RPL22A RPL10 RPS25B RPS29A CCW14 RPL6B RPS17A YML025C RPS18B RPL6A RPL13B RPS16A RPL36A RPS10B RPL20A RPL16B RPS19B RPP2A RPS15 RPS19A RPL25 RPS7A RPS10A RPL20B RPS12 RPS9A RPS6A RPL5 RPL33A RPL7B RPL1A RPL11A             85        310

 

 

 

GO Biological Process

Category          p-value In Category from Cluster          k          f

macromolecule biosynthesis [GO:0009059]      1e-14   RPL19B SKT5 RPS8A RPS11B TEF2 RPS6B RPS9B SRO9 RPS29B RPL31A RPL13A RPS16B RPP1B RPL41B RPL35B RPL41A PPH22 RPL35A SSB1 KRS1 RPL12B RPS17B RPS18A RPL27B RPL37B RPL12A RPL34A RPS24A RPS8B RPL23B CCA1 RPL2A RPL30 RPL24A RPL28 RPS2 RPS26A RPS25A RPL26B RPL11B RPS23A RPL14B RPL8A RPS27B RPL42B CHS7 RPS4B RPL2B RPL40A RPS21B RPL39 RPS22A RPS14B RPS5 RPL14A RPS27A RPL17A RPS21A RPL40B RPS0B RPL22A RPL10 RPS25B RPS29A RPL6B RPS17A YML025C RPS18B RPL6A SEC59 RPL13B RPS16A RPL36A RPS10B RPL20A RPL16B RPS19B RPP2A RPS15 RPS19A RPL25 RPS7A RPS10A RPL20B RPS12 RPS9A RPS6A RPL5 RPL33A RPL7B RPL1A TEF1 RPL11A         93        422

protein biosynthesis [GO:0006412]       1e-14   RPL19B RPS8A RPS11B TEF2 RPS6B RPS9B SRO9 RPS29B RPL31A RPL13A RPS16B RPP1B RPL41B RPL35B RPL41A PPH22 RPL35A SSB1 KRS1 RPL12B RPS17B RPS18A RPL27B RPL37B RPL12A RPL34A RPS24A RPS8B RPL23B CCA1 RPL2A RPL30 RPL24A RPL28 RPS2 RPS26A RPS25A RPL26B RPL11B RPS23A RPL14B RPL8A RPS27B RPL42B RPS4B RPL2B RPL40A RPS21B RPL39 RPS22A RPS14B RPS5 RPL14A RPS27A RPL17A RPS21A RPL40B RPS0B RPL22A RPL10 RPS25B RPS29A RPL6B RPS17A YML025C RPS18B RPL6A SEC59 RPL13B RPS16A RPL36A RPS10B RPL20A RPL16B RPS19B RPP2A RPS15 RPS19A RPL25 RPS7A RPS10A RPL20B RPS12 RPS9A RPS6A RPL5 RPL33A RPL7B RPL1A TEF1 RPL11A            91        415

biosynthesis [GO:0009058]      1e-14   RPL19B SKT5 RPS8A RPS11B TEF2 RPS6B RPS9B HIS4 SRO9 RPS29B RPL31A RPL13A RPS16B RPP1B RPL41B RPL35B RPL41A PPH22 RPL35A SSB1 KRS1 PRO1 ADE8 RPL12B RPS17B RPS18A RPL27B RPL37B GCN4 RPL12A RPL34A RPS24A RPS8B RPL23B CCA1 RPL2A RPL30 RPL24A RPL28 RPS2 RPS26A RPS25A RPL26B RPL11B RPS23A TDH3 RPL14B RPL8A RPS27B RPL42B CHS7 RPS4B RPL2B RHR2 RPL40A SIP4 LCB3 RPS21B RPL39 RPS22A RPS14B RPS5 RPL14A RPS27A RPL17A RPS21A RPL40B RPS0B RPL22A RPL10 RPS25B RPS29A RPL6B RPS17A YML025C RPS18B RPL6A SEC59 ERG5 RPL13B RPS16A RPL36A RPS10B RPL20A RPL16B RPS19B RPP2A RPS15 RPS19A RPL25 RPS7A RPS10A RPL20B RPS12 RPS9A RPS6A RPL5 RPL33A RPL7B RPL1A TEF1 RPL11A    102      731

protein metabolism [GO:0019538]        1e-14   PIM1 RPL19B AST1 RPS8A RPS11B TEF2 RPS6B RPS9B KCC4 SRO9 RPS29B RPL31A RPL13A RPS16B RPP1B RPL41B RPL35B RPL41A PPH22 RPL35A SSB1 KRS1 SIZ1 RPL12B RPS17B ADA2 RPS18A RPL27B RPL37B GEA2 RPL12A RPL34A RPS24A RPS8B RPL23B CCA1 EPL1 RPL2A RPL30 RPL24A RPL28 VPS73 RPS2 MON1 RPS26A RPS25A RPL26B RPL11B RPS23A RPL14B RPL8A RPS27B RPL42B CHS7 RPS4B MNL1 RPL2B RPL40A MLP2 RPS21B RPL39 RPS22A RPS14B RPS5 SFT1 RPL14A RPS27A RPL17A RPS21A RPL40B MLP1 UBI4 RPS0B RPL22A RPL10 RPS25B RPS29A RPL6B RPS17A YML025C RPS18B RPL6A SEC59 RPL13B RPS16A RPL36A RPS10B PEP5 RPL20A RPL16B YCK2 RPS19B RPP2A RPS15 RPS19A RPL25 YGK3 NOB1 RPS7A UBP2 RPS10A RPL20B RPS12 RPS9A RPS6A RPL5 RPL33A RPL7B RPL1A TEF1 RPL11A PRE2 COG4 DBF20 SGV1 115      1168

metabolism [GO:0008152]       1e-14   POP5 PIM1 RPL19B SKT5 AST1 RPS8A RPS11B TKL2 TEF2 RPS6B NTC20 RPS9B KCC4 HIS4 SRO9 RPS29B RPL31A RPL13A RPS16B RPP1B RPL41B RPL35B RPL41A PPH22 RPL35A SSB1 KRS1 PRO1 CFT1 ADE8 SIZ1 RPL12B RPS17B ADA2 UTP6 RPS18A RPL27B RPL37B GCN4 GEA2 RPL12A RPL34A RPS24A RPS8B SLX8 RPL23B CCA1 RPH1 EPL1 RPL2A RPL30 RPL24A GUP1 RPL28 VPS73 SNF4 RPS2 MON1 RPS26A RPS25A RPL26B RPL11B RPS23A TDH3 RPL14B RPL8A RPS27B RPL42B CHS7 RPS4B MNL1 RPL2B RHR2 RPL40A MLP2 SIP4 DPB11 LCB3 RPS21B RPL39 RPS22A RPS14B RPS5 HOM6 SFT1 RPL14A RPS27A RPL17A RPS21A RPL40B MLP1 UBI4 PDC1 RPS0B RPL22A RPL10 RPS25B RPS29A CAR2 RPL6B RPS17A YML025C RPS18B RPL6A SEC59 ERG5 RPL13B RPS16A RPL36A RRP5 RPS10B PEP5 RPL20A ZRC1 RPL16B YCK2 RAP1 RPS19B RPP2A RPS15 GPD2 RPS19A RPL25 YGK3 PFK27 NOB1 RKI1 RPS7A UBP2 RPS10A RPL20B RPA43 RPA190 RPS12 RPS9A MOT1 RPS6A RPL5 RPL33A RPL7B RPL1A TEF1 RPL11A PRE2 COG4 RPC40 DBF20 SGV1   148      2693

cell growth and/or maintenance [GO:0008151] 3.25495e-12    POP5 PIM1 RPL19B SKT5 AST1 KTI11 RPS8A RPS11B TKL2 TEF2 FZO1 RPS6B NTC20 RPS9B KCC4 AGP1 HIS4 SRO9 GPD1 TSR1 RPS29B RPL31A RPL13A RPS16B RPP1B RPL41B RPL35B RPL41A PPH22 RPL35A SSB1 YDR036C KRS1 PMP3 PRO1 CFT1 SHE9 ADE8 SIZ1 RPL12B RPS17B ADA2 UTP6 RPS18A UGO1 RPL27B RPL37B GCN4 GEA2 RPL12A RPL34A RPS24A RPS8B SLX8 RPL23B CCA1 RPH1 BUD27 EPL1 RPL2A RPL30 RPL24A HSF1 MPS2 GUP1 RPL28 VPS73 SNF4 RPS2 MON1 RPS26A RPS25A RPL26B RPL11B RPS23A TDH3 RPL14B RPL8A RPS27B ECM12 HXT5 RPL42B CHS7 RPS4B MNL1 RPL2B RHR2 RPL40A MLP2 SIP4 DPB11 LCB3 RPS21B RPL39 RPS22A RPS14B APS2 PTK2 RPS5 HOM6 SFT1 RPL14A RPS27A STE3 RPL17A RPS21A RPL40B MLP1 UBI4 PDC1 RPS0B RPL22A BUD20 RPL10 CTS1 RPS25B RPS29A CCW14 BDF1 CAR2 VMA6 RPL6B RPS17A YML025C RPS18B RPL6A SEC59 BUD22 ERG5 RPL13B RPS16A RPL36A RRP5 RPS10B PEP5 RPL20A ZRC1 RPL16B YCK2 RAP1 RPS19B RPP2A RPS15 GPD2 MAM3 RPS19A RPL25 YGK3 PFK27 WHI2 NOB1 SGT1 RKI1 RPS7A UBP2 RPS10A RPL20B RPA43 RPA190 RPS12 RPS9A MOT1 RPS6A RPL5 RPL33A RPL7B RPL1A TEF1 RPL11A PRE2 COG4 RPC40 DBF20 SGV1   174      3657

ribosomal subunit assembly [GO:0042257]       3.02669e-11    RPS11B RPL12B RPS17B RPL12A RPL11B RPS14B RPS0B RPL10 RPL6B RPS17A YML025C RPL6A RPL25 RPL5 RPL11A 15        48

ribosome assembly [GO:0042255]       5.85975e-11    RPS11B RPL12B RPS17B RPL12A RPL11B RPS14B RPS0B RPL10 RPL6B RPS17A YML025C RPL6A RPL25 RPL5 RPL11A 15        50

ribosomal large subunit assembly and maintenance [GO:0000027]         1.73174e-07    RPL12B RPL12A RPL11B RPL10 RPL6B YML025C RPL6A RPL25 RPL5 RPL11A     10        35

ribosome biogenesis and assembly [GO:0042254]        8.34177e-07    POP5 RPS11B TSR1 RPL12B RPS17B UTP6 RPL12A RPL30 RPL11B RPS14B RPS0B RPL10 RPL6B RPS17A YML025C RPL6A RRP5 RPL25 RPL5 RPL11A             20        165

regulation of translational fidelity [GO:0006450]            9.43867e-07    RPS11B RPS9B RPS2 RPS23A RPS9A         5            7

 

 

 

GO Cellular Component

Category          p-value In Category from Cluster          k          f

cytosolic small ribosomal subunit (sensu Eukarya) [GO:0005843]          1e-14   RPS8A RPS11B RPS6B RPS9B RPS29B RPS16B RPS17B RPS18A RPS24A RPS8B RPS2 RPS26A RPS25A RPS23A RPS27B RPS4B RPS21B RPS22A RPS14B RPS5 RPS27A RPS21A RPS0B RPS25B RPS29A RPS17A RPS18B RPS16A RPS10B RPS19B RPS15 RPS19A RPS7A RPS10A RPS12 RPS9A RPS6A     37        61

eukaryotic 48S initiation complex [GO:0016283]          1e-14   RPS8A RPS11B RPS6B RPS9B RPS29B RPS16B RPS17B RPS18A RPS24A RPS8B RPS2 RPS26A RPS25A RPS23A RPS27B RPS4B RPS21B RPS22A RPS14B RPS5 RPS27A RPS21A RPS0B RPS25B RPS29A RPS17A RPS18B RPS16A RPS10B RPS19B RPS15 RPS19A RPS7A RPS10A RPS12 RPS9A RPS6A        37        61

eukaryotic 43S pre-initiation complex [GO:0016282]    1e-14   RPS8A RPS11B RPS6B RPS9B RPS29B RPS16B RPS17B RPS18A RPS24A RPS8B RPS2 RPS26A RPS25A RPS23A RPS27B RPS4B RPS21B RPS22A RPS14B RPS5 RPS27A RPS21A RPS0B RPS25B RPS29A RPS17A RPS18B RPS16A RPS10B RPS19B RPS15 RPS19A RPS7A RPS10A RPS12 RPS9A RPS6A        37        67

cytosolic ribosome (sensu Eukarya) [GO:0005830]       1e-14   RPL19B RPS8A RPS11B RPS6B RPS9B RPS29B RPL31A RPL13A RPS16B RPP1B RPL41B RPL35B RPL41A RPL35A RPL12B RPS17B RPS18A RPL27B RPL37B RPL12A RPL34A RPS24A RPS8B RPL23B RPL2A RPL30 RPL24A RPL28 RPS2 RPS26A RPS25A RPL26B RPL11B RPS23A RPL14B RPL8A RPS27B RPL42B RPS4B RPL2B RPL40A RPS21B RPL39 RPS22A RPS14B RPS5 RPL14A RPS27A RPL17A RPS21A RPL40B RPS0B RPL22A RPL10 RPS25B RPS29A RPL6B RPS17A RPS18B RPL6A RPL13B RPS16A RPL36A RPS10B RPL20A RPL16B RPS19B RPP2A RPS15 RPS19A RPL25 RPS7A RPS10A RPL20B RPS12 RPS9A RPS6A RPL5 RPL33A RPL7B RPL1A RPL11A             82        151

cytosolic large ribosomal subunit (sensu Eukarya) [GO:0005842]          1e-14   RPL19B RPL31A RPL13A RPP1B RPL41B RPL35B RPL41A RPL35A RPL12B RPL27B RPL37B RPL12A RPL34A RPL23B RPL2A RPL30 RPL24A RPL28 RPL26B RPL11B RPL14B RPL8A RPL42B RPL2B RPL40A RPL39 RPL14A RPL17A RPL40B RPL22A RPL10 RPL6B RPL6A RPL13B RPL36A RPL20A RPL16B RPP2A RPL25 RPL20B RPL5 RPL33A RPL7B RPL1A RPL11A          45        83

small ribosomal subunit [GO:0015935] 1e-14   RPS8A RPS11B RPS6B RPS9B RPS29B RPS16B RPS17B RPS18A RPS24A RPS8B RPS2 RPS26A RPS25A RPS23A RPS27B RPS4B RPS21B RPS22A RPS14B RPS5 RPS27A RPS21A RPS0B RPS25B RPS29A RPS17A RPS18B RPS16A RPS10B RPS19B RPS15 RPS19A RPS7A RPS10A RPS12 RPS9A RPS6A            37        88

large ribosomal subunit [GO:0015934]  1e-14   RPL19B RPL31A RPL13A RPP1B RPL41B RPL35B RPL41A RPL35A RPL12B RPL27B RPL37B RPL12A RPL34A RPL23B RPL2A RPL30 RPL24A RPL28 RPL26B RPL11B RPL14B RPL8A RPL42B RPL2B RPL40A RPL39 RPL14A RPL17A RPL40B RPL22A RPL10 RPL6B YML025C RPL6A RPL13B RPL36A RPL20A RPL16B RPP2A RPL25 RPL20B RPL5 RPL33A RPL7B RPL1A RPL11A       46        122

ribosome [GO:0005840]          1e-14   RPL19B RPS8A RPS11B TEF2 RPS6B RPS9B SRO9 RPS29B RPL31A RPL13A RPS16B RPP1B RPL41B RPL35B RPL41A RPL35A SSB1 RPL12B RPS17B RPS18A RPL27B RPL37B RPL12A RPL34A RPS24A RPS8B RPL23B RPL2A RPL30 RPL24A RPL28 RPS2 RPS26A RPS25A RPL26B RPL11B RPS23A RPL14B RPL8A RPS27B RPL42B RPS4B RPL2B RPL40A RPS21B RPL39 RPS22A RPS14B RPS5 RPL14A RPS27A RPL17A RPS21A RPL40B RPS0B RPL22A RPL10 RPS25B RPS29A RPL6B RPS17A YML025C RPS18B RPL6A RPL13B RPS16A RPL36A RPS10B RPL20A RPL16B RPS19B RPP2A RPS15 RPS19A RPL25 RPS7A RPS10A RPL20B RPS12 RPS9A RPS6A RPL5 RPL33A RPL7B RPL1A TEF1 RPL11A   87        258

cytosol [GO:0005829] 1e-14   RPL19B RPS8A RPS11B RPS6B RPS9B RPS29B RPL31A RPL13A RPS16B RPP1B RPL41B RPL35B RPL41A RPL35A RPL12B RPS17B RPS18A RPL27B RPL37B RPL12A RPL34A RPS24A RPS8B RPL23B RPL2A RPL30 RPL24A RPL28 RPS2 RPS26A RPS25A RPL26B RPL11B RPS23A TDH3 RPL14B RPL8A RPS27B RPL42B RPS4B RPL2B RPL40A RPS21B RPL39 RPS22A RPS14B RPS5 RPL14A RPS27A RPL17A RPS21A RPL40B RPS0B RPL22A RPL10 RPS25B RPS29A RPL6B RPS17A RPS18B RPL6A RPL13B RPS16A RPL36A RPS10B RPL20A RPL16B RPS19B RPP2A RPS15 GPD2 RPS19A RPL25 NOB1 RPS7A RPS10A RPL20B RPS12 RPS9A RPS6A RPL5 RPL33A RPL7B RPL1A RPL11A PRE2      86        310

ribonucleoprotein complex [GO:0030529]        1e-14   POP5 RPL19B RPS8A RPS11B TEF2 RPS6B NTC20 RPS9B SRO9 RPS29B RPL31A RPL13A RPS16B RPP1B RPL41B RPL35B RPL41A RPL35A SSB1 RPL12B RPS17B UTP6 RPS18A RPL27B RPL37B RPL12A RPL34A RPS24A RPS8B RPL23B RPL2A RPL30 RPL24A RPL28 RPS2 RPS26A RPS25A RPL26B RPL11B RPS23A RPL14B RPL8A RPS27B RPL42B RPS4B RPL2B RPL40A RPS21B RPL39 RPS22A RPS14B RPS5 RPL14A RPS27A RPL17A RPS21A RPL40B RPS0B RPL22A RPL10 RPS25B RPS29A RPL6B RPS17A YML025C RPS18B RPL6A RPL13B RPS16A RPL36A RRP5 RPS10B RPL20A RPL16B RPS19B RPP2A RPS15 RPS19A RPL25 RPS7A RPS10A RPL20B RPS12 RPS9A RPS6A RPL5 RPL33A RPL7B RPL1A TEF1 RPL11A            91        380

cytoplasm [GO:0005737]         1e-14   PIM1 RPL19B SKT5 RPS8A RPS11B TEF2 FZO1 RPS6B RPS9B SRO9 GPD1 RPS29B RPL31A RPL13A RPS16B RPP1B RPL41B RPL35B RPL41A RPL35A SSB1 KRS1 SHE9 RPL12B RPS17B RPS18A UGO1 RPL27B RPL37B GEA2 RPL12A RPL34A RPS24A AST2 RPS8B RPL23B CCA1 RPL2A RPL30 RPL24A MPS2 RPL28 SNF4 RPS2 RPS26A RPS25A RPL26B RPL11B RPS23A TDH3 RPL14B RPL8A RPS27B YHR033W RPL42B CHS7 RPS4B MNL1 RPL2B RPL40A LCB3 RPS21B RPL39 RPS22A RPS14B APS2 RPS5 SFT1 RPL14A RPS27A RPL17A RPS21A RPL40B UBI4 RPS0B RPL22A RPL10 CTS1 RPS25B RPS29A YLR437C CAR2 VMA6 RPL6B RPS17A YML025C RPS18B RPL6A ERG5 ASC1 RPL13B RPS16A RPL36A RPS10B PEP5 RPL20A ZRC1 RPL16B RPS19B RPP2A RPS15 GPD2 RPS19A RPL25 PFK27 NOB1 RPS7A UBP2 RPS10A RPL20B RPS12 RPS9A RPS6A RPL5 RPL33A RPL7B RPL1A TEF1 RPL11A PRE2 COG4      121            1810

intracellular [GO:0005622]       1e-14   POP5 PIM1 RPL19B SKT5 RPS8A RPS11B TEF2 FZO1 RPS6B NTC20 RPS9B AGP1 SRO9 GPD1 TSR1 RPS29B RPL31A RPL13A RPS16B RPP1B RPL41B RPL35B RPL41A RPL35A SSB1 KRS1 PMP3 CFT1 SHE9 SIZ1 RPL12B RPS17B ADA2 UTP6 RPS18A UGO1 RPL27B RPL37B GCN4 GEA2 RPL12A RPL34A RPS24A AST2 RPS8B SLX8 RPL23B CCA1 RPH1 EPL1 RPL2A RPL30 RPL24A HSF1 MPS2 RPL28 SNF4 RPS2 RPS26A RPS25A RPL26B RPL11B RPS23A TDH3 RPL14B RPL8A RPS27B YHR033W HXT5 RPL42B CHS7 RPS4B MNL1 RPL2B RPL40A MLP2 SIP4 DPB11 LCB3 RPS21B RPL39 RPS22A RPS14B APS2 RPS5 SFT1 RPL14A RPS27A STE3 RPL17A RPS21A RPL40B MLP1 UBI4 RPS0B RPL22A BUD20 RPL10 CTS1 RPS25B RPS29A BDF1 YLR437C CAR2 VMA6 RPL6B RPS17A YML025C RPS18B RPL6A BUD22 ERG5 ASC1 RPL13B RPS16A YMR144W RPL36A RRP5 RPS10B PEP5 RPL20A ZRC1 RPL16B YCK2 RAP1 RPS19B RPP2A RPS15 GPD2 RPS19A RPL25 PFK27 NOB1 SGT1 RPS7A UBP2 RPS10A RPL20B RPA43 RPA190 RPS12 RPS9A MOT1 RPS6A RPL5 RPL33A RPL7B RPL1A TEF1 RPL11A PRE2 COG4 RPC40 SGV1             154            2921

cell [GO:0005623]       1.40998e-14    POP5 PIM1 RPL19B SKT5 AST1 RPS8A RPS11B TEF2 FZO1 RPS6B NTC20 RPS9B KCC4 AGP1 HIS4 SRO9 GPD1 TSR1 RPS29B RPL31A RPL13A RPS16B RPP1B RPL41B RPL35B RPL41A RPL35A SSB1 KRS1 PMP3 CFT1 SHE9 SIZ1 RPL12B RPS17B ADA2 UTP6 RPS18A UGO1 RPL27B RPL37B GCN4 GEA2 RPL12A RPL34A RPS24A AST2 RPS8B SLX8 RPL23B CCA1 RPH1 EPL1 RPL2A RPL30 RPL24A HSF1 MPS2 GUP1 RPL28 SNF4 RPS2 RPS26A RPS25A RPL26B RPL11B RPS23A TDH3 RPL14B RPL8A RPS27B YHR033W HXT5 RPL42B CHS7 RPS4B MNL1 RPL2B RPL40A MLP2 SIP4 DPB11 LCB3 RPS21B RPL39 RPS22A RPS14B APS2 RPS5 SFT1 RPL14A RPS27A STE3 RPL17A RPS21A RPL40B MLP1 UBI4 RPS0B RPL22A BUD20 RPL10 CTS1 RPS25B RPS29A BDF1 YLR437C CAR2 VMA6 RPL6B RPS17A YML025C RPS18B RPL6A SEC59 BUD22 ERG5 ASC1 RPL13B RPS16A YMR144W RPL36A RRP5 RPS10B PEP5 RPL20A ZRC1 RPL16B YCK2 RAP1 RPS19B RPP2A RPS15 GPD2 RPS19A RPL25 PFK27 NOB1 SGT1 RPS7A UBP2 RPS10A RPL20B RPA43 RPA190 RPS12 RPS9A MOT1 RPS6A RPL5 RPL33A RPL7B RPL1A TEF1 RPL11A PRE2 COG4 RPC40 SGV1   159      3106

 

 

 

SMART Domains

Category          p-value In Category from Cluster          k          f

 

 

 

PFam-A Domains

Category          p-value In Category from Cluster          k          f

PF00467 (KOW)        3.08639e-05    RPL27B RPL26B RPL14B RPS4B RPL14A 5          12

 

 

 

Yeast Two Hybrid - Uetz

Category          p-value In Category from Cluster          k          f

 

 

 

Yeast Two Hybrid - Ito (core)

Category          p-value In Category from Cluster          k          f

 

 

 

Yeast Two Hybrid - Ito (full)

Category          p-value In Category from Cluster          k          f

 

 

 

Synthetic Genetic Array Analysis

Category          p-value In Category from Cluster          k          f

 

 

 

MDS Proteomics Complexes

Category          p-value In Category from Cluster          k          f

 

 

 

Cellzome Complexes

Category          p-value In Category from Cluster          k          f

YBR031W (RPL4A)   1e-14   RPL13A RPL12B RPL27B RPL28 RPL11B RPL2B RPS14B RPL17A RPL10 RPL6A RPL13B RPL20A RPL16B RPL25 RPL20B RPL33A RPL7B            17        39

 

 

 

Proteome Localization--Observed

Category          p-value In Category from Cluster          k          f

cyto      0.000122268   FUN19 RPL19B YBL029C-A RPS8A TEF2 RPS6B AGP1 HIS4 GPD1 RPL31A RPL13A RPL41A PPH22 SSB1 KRS1 PRO1 RPS17B RPS18A YEL007W GEA2 ZRG8 YER034W AST2 RPL23B BUD27 RPL24A SNF4 RPS2 RPS26A RPL26B RPL11B YGR117C RPS23A TDH3 RPL8A YHR033W RHR2 YJL049W RPS22A RPS5 HOM6 SFT1 RPL14A RPS27A RPL17A UBI4 PDC1 RPL22A RPL10 YLR437C CAR2 ASC1 RPS16A YNL010W YNL011C RPL16B RPS15 MAM3 YOL109W RPL25 YGK3 PFK27 WHI2 RPS9A RPL5 RPL7B YPL199C TEF1 RPL11A       69        1324

 

 

 

Proteome Localization--Predicted+Observed

Category          p-value In Category from Cluster          k          f

cyt        7.65691e-09    FUN19 RPL19B YBL029W YBL060W SKT5 AST1 RPS8A RPS11B TKL2 TEF2 FZO1 DTR1 RPS6B RPS9B AGP1 HIS4 SRO9 GPD1 TSR1 RPS29B RPL31A RXT3 RPL13A RPS16B RPP1B YDL133W RPL35B RPL41A YDL186W PPH22 RPL35A SSB1 KRS1 PMP3 PRO1 ADE8 RPL12B RPS17B UTP6 RPS18A UGO1 RPL27B RPL37B YEL007W GEA2 YEL023C RPL12A ZRG8 YER034W RPS24A AST2 RPS8B SLX8 RPL23B BUD27 RPL30 RPL24A RPL28 RPS2 MON1 RPS26A RPS25A YGR033C RPL26B RPL11B YGR117C RPS23A TDH3 RPL14B RPL8A RPS27B YHR033W HXT5 YHR122W RPL42B CHS7 RPS4B MNL1 RPL2B RHR2 YIL055C RPL40A YJL049W SIP4 RPS21B RPL39 RPS22A RPS14B RPS5 HOM6 RPL14A RPS27A RPL17A RPS21A RPL40B UBI4 PDC1 RPS0B RPL22A RPL10 RPS25B YLR387C RPS29A YLR437C CAR2 VMA6 RPL6B RPS17A RPS18B RPL6A ASC1 RPL13B RPS16A RPL36A RPS10B PEP5 RPL20A YNL010W YNL011C RPL16B YNL101W YCK2 RPS19B RPP2A RPS15 YOL109W RPS19A RPL25 YGK3 PFK27 WHI2 SGT1 RKI1 RPS7A UBP2 YOR292C RPS10A RPL20B SCP1 RPS12 RPS9A RPS6A RPL5 RPL33A RPL7B YPL199C RPL1A TEF1 RPL11A PRE2 COG4 DBF20         152      3210

 

 

 

Deletions Consortium (Essentiality, Morphology)

Category          p-value In Category from Cluster          k          f

 

 

 

Yeast Fitness Data

Category          p-value In Category from Cluster          k          f

Slow Growers  1.92348e-06    RPL19B RPS11B FZO1 RPS6B RPS9B RPS29B RPL31A RPL35A PMP3 PRO1 RPL12B RPS18A RPL34A RPS24A SLX8 RPL23B BUD27 GUP1 SNF4 RPS23A RPS27B RPS4B RPS21B RPL39 RPL14A PDC1 YLR047C RPL22A BUD20 BDF1 VMA6 RPL6B RPS17A RPL6A BUD22 ASC1 RPL13B RPS16A RPL16B RPS19B RPS19A RPS7A RPS10A RPS6A             44        617

 

 

 

Published Complexes

Category          p-value In Category from Cluster          k          f

Andersen et al. (2002) - Curr Bio 12:1-            2.86544e-10    RPS6B RPS9B RPL31A RPL12B RPL27B RPS8B RPL28 RPL26B RPL11B RPL14B RPL2B RPS5 RPL17A UBI4 RPL22A RPL6B RPS18B RPL13B RPS16A RRP5 RPL25 RPA190 RPS12 RPL5 RPC40            25        165

Harnicharnpai et al. (2001) - Mol Cell 8:505-   0.000131184   SSB1 RPS2 TDH3 RPS22A RPL10 RPS15 RPL5      7            34


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Rap1-PBMandLeeORLiebChIP-exact.FunSpec.txt

Input Cluster (n=18)

YBR188C        NTC20

YBR189W       RPS9B

YCL030C        HIS4

YDL136W       RPL35B

YDR500C       RPL37B

YDR501W      PLM2

YGL030W       RPL30

YGL031C        RPL24A

YKR057W      RPS21A

YMR013W-A

YMR014W      BUD22

YMR116C       ASC1

YNL216W      RAP1

YOL059W      GPD2

YOL060C       MAM3

YOR124C       UBP2

YOR338W

YPR080W       TEF1

 

Genes Not Found:

 

SNR72

SNR73

SNR74

SNR75

MIPS Functional Classification

Category          p-value In Category from Cluster          k          f

PROTEIN SYNTHESIS          1.84582e-07    RPS9B RPL35B RPL37B RPL30 RPL24A RPS21A ASC1 RAP1 TEF1             9          359

ribosome biogenesis      1.17032e-06    RPS9B RPL35B RPL37B RPL30 RPL24A RPS21A ASC1   7          215

cytoplasm         7.26022e-06    RPS9B RPL35B RPL37B RPL30 RPL24A RPS21A ASC1 UBP2 TEF1       9          554

 

 

 

MIPS Phenotypes

Category          p-value In Category from Cluster          k          f

 

 

 

MIPS Subcellular Localization

Category          p-value In Category from Cluster          k          f

cytoplasm         1.27364e-05    RPS9B RPL35B RPL37B RPL30 RPL24A RPS21A ASC1 UBP2 TEF1       9          593

 

 

 

MIPS Protein Complexes

Category          p-value In Category from Cluster          k          f

Cytoplasmic ribosomes 5.60506e-08    RPS9B RPL35B RPL37B RPL30 RPL24A RPS21A ASC1   7          138

Translation complexes   1.2933e-07      RPS9B RPL35B RPL37B RPL30 RPL24A RPS21A ASC1 TEF1      8          240

cytoplasmic ribosomal large subunit       6.90574e-05    RPL35B RPL37B RPL30 RPL24A     4          81

 

 

 

MIPS Protein Classes

Category          p-value In Category from Cluster          k          f

 

 

 

GO Molecular Function

Category          p-value In Category from Cluster          k          f

structural constituent of ribosome [GO:0003735]          1.56435e-05    RPS9B RPL35B RPL37B RPL30 RPL24A RPS21A          6          206

 

 

 

GO Biological Process

Category          p-value In Category from Cluster          k          f

 

 

 

GO Cellular Component

Category          p-value In Category from Cluster          k          f

cytosolic ribosome (sensu Eukarya) [GO:0005830]       2.58949e-06    RPS9B RPL35B RPL37B RPL30 RPL24A RPS21A          6          151

ribosome [GO:0005840]          3.98341e-06    RPS9B RPL35B RPL37B RPL30 RPL24A RPS21A TEF1    7          258

ribonucleoprotein complex [GO:0030529]        4.33987e-06    NTC20 RPS9B RPL35B RPL37B RPL30 RPL24A RPS21A TEF1             8          380

cytosol [GO:0005829] 1.34453e-05    RPS9B RPL35B RPL37B RPL30 RPL24A RPS21A GPD2   7          310

cytosolic large ribosomal subunit (sensu Eukarya) [GO:0005842]          7.60009e-05    RPL35B RPL37B RPL30 RPL24A             4          83

 

 

 

SMART Domains

Category          p-value In Category from Cluster          k          f

 

 

 

PFam-A Domains

Category          p-value In Category from Cluster          k          f

 

 

 

Yeast Two Hybrid - Uetz

Category          p-value In Category from Cluster          k          f

 

 

 

Yeast Two Hybrid - Ito (core)

Category          p-value In Category from Cluster          k          f

 

 

 

Yeast Two Hybrid - Ito (full)

Category          p-value In Category from Cluster          k          f

 

 

 

Synthetic Genetic Array Analysis

Category          p-value In Category from Cluster          k          f

 

 

 

MDS Proteomics Complexes

Category          p-value In Category from Cluster          k          f

 

 

 

Cellzome Complexes

Category          p-value In Category from Cluster          k          f

 

 

 

Proteome Localization--Observed

Category          p-value In Category from Cluster          k          f

 

 

 

Proteome Localization--Predicted+Observed

Category          p-value In Category from Cluster          k          f

 

 

 

Deletions Consortium (Essentiality, Morphology)

Category          p-value In Category from Cluster          k          f

 

 

 

Yeast Fitness Data

Category          p-value In Category from Cluster          k          f

 

 

 

Published Complexes

Category          p-value In Category from Cluster          k          f


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Rap1-PBMandnotLeeORLiebChIP-alldata.FunSpec.txt

Input Cluster (n=115)

YBL049W

YBR052C

YBR060C        ORC2

YBR149W       ARA1

YBR196C        PGI1

YBR204C

YBR205W       KTR3

YBR295W       PCA1

YDL235C        YPD1

YDR050C       TPI1

YDR070C

YDR079C-A

YDR080W      VPS41

YDR109C

YDR110W      FOB1

YDR119W

YDR249C

YDR251W      PAM1

YDR258C       HSP78

YDR264C       AKR1

YDR265W      PEX10

YDR275W

YEL020W-A   TIM9

YER047C        SAP1

YER066W

YER158C

YFR032C

YFR032C-A    RPL29

YGL147C        RPL9A

YGR032W      GSC2

YGR052W

YGR233C       PHO81

YGR234W      YHB1

YHL036W       MUP3

YHL038C        CBP2

YHR193C       EGD2

YHR194W      MDM31

YIL001W

YIL002C         INP51

YJL062W        LAS21

YJL062W-A

YJL063C         MRPL8

YJL076W        NET1

YJL077C         ICS3

YJL091C

YJL148W        RPA34

YJR073C         OPI3

YJR074W        MOG1

YJR083C

YJR084W        CSN12

YKL009W      MRT4

YKL010C       UFD4

YKL015W      PUT3

YKL016C       ATP7

YKL019W      RAM2

YKL020C       SPT23

YKL033W

YKL081W      TEF4

YKL082C

YKL096W      CWP1

YKL150W      MCR1

YKL151C

YKL182W      FAS1

YLL051C        FRE6

YLR003C

YLR004C

YLR005W       SSL1

YLR023C

YLR208W       SEC13

YLR213C        CRR1

YLR214W       FRE1

YLR249W       YEF3

YLR312C

YLR312W-A   MRPL15

YLR325C        RPL38

YLR326W

YLR406C        RPL31B

YLR407W

YLR413W

YLR452C        SST2

YML010W      SPT5

YML011C

YMR026C       PEX12

YMR027W      HRT2

YMR087W

YMR092C       AIP1

YMR093W      UTP15

YMR095C       SNO1

YMR096W      SNZ1

YMR127C       SAS2

YMR128W      ECM16

YMR205C       PFK2

YMR206W

YMR251W

YNL186W      UBP10

YNR069C

YNR070W      PDR18

YOL103W      ITR2

YOL120C       RPL18A

YOR032C       HMS1

YOR093C

YOR094W      ARF3

YOR103C       OST2

YOR104W      PIN2

YOR113W      AZF1

YOR267C       HRK1

YOR269W      PAC1

YPL036W       PMA2

YPL037C        EGD1

YPL054W       LEE1

YPL055C        LGE1

YPL075W       GCR1

YPL229W

YPR057W       BRR1

YPR135W       CTF4

 

Genes Not Found:

 

SNR128

SNR190

SNR38

TS%28UGA%29E

YBR196C-A

YBR196C-B

YFR032C-B

YLR406C-A

YLR412C-A

YOR032W-A

MIPS Functional Classification

Category          p-value In Category from Cluster          k          f

 

 

 

MIPS Phenotypes

Category          p-value In Category from Cluster          k          f

 

 

 

MIPS Subcellular Localization

Category          p-value In Category from Cluster          k          f

 

 

 

MIPS Protein Complexes

Category          p-value In Category from Cluster          k          f

 

 

 

MIPS Protein Classes

Category          p-value In Category from Cluster          k          f

 

 

 

GO Molecular Function

Category          p-value In Category from Cluster          k          f

 

 

 

GO Biological Process

Category          p-value In Category from Cluster          k          f

 

 

 

GO Cellular Component

Category          p-value In Category from Cluster          k          f

 

 

 

SMART Domains

Category          p-value In Category from Cluster          k          f

 

 

 

PFam-A Domains

Category          p-value In Category from Cluster          k          f

 

 

 

Yeast Two Hybrid - Uetz

Category          p-value In Category from Cluster          k          f

 

 

 

Yeast Two Hybrid - Ito (core)

Category          p-value In Category from Cluster          k          f

 

 

 

Yeast Two Hybrid - Ito (full)

Category          p-value In Category from Cluster          k          f

 

 

 

Synthetic Genetic Array Analysis

Category          p-value In Category from Cluster          k          f

 

 

 

MDS Proteomics Complexes

Category          p-value In Category from Cluster          k          f

 

 

 

Cellzome Complexes

Category          p-value In Category from Cluster          k          f

 

 

 

Proteome Localization--Observed

Category          p-value In Category from Cluster          k          f

 

 

 

Proteome Localization--Predicted+Observed

Category          p-value In Category from Cluster          k          f

 

 

 

Deletions Consortium (Essentiality, Morphology)

Category          p-value In Category from Cluster          k          f

 

 

 

Yeast Fitness Data

Category          p-value In Category from Cluster          k          f

 

 

 

Published Complexes

Category          p-value In Category from Cluster          k          f


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Rap1-PBMandnotLeeORLiebChIP-2SD.FunSpec.txt

Input Cluster (n=49)

YBL049W

YBR060C        ORC2

YDR070C

YDR109C

YDR110W      FOB1

YDR249C

YDR251W      PAM1

YER047C        SAP1

YGL147C        RPL9A

YGR233C       PHO81

YGR234W      YHB1

YHL036W       MUP3

YHL038C        CBP2

YIL001W

YIL002C         INP51

YJR073C         OPI3

YJR074W        MOG1

YKL015W      PUT3

YKL016C       ATP7

YKL081W      TEF4

YKL082C

YKL150W      MCR1

YKL151C

YKL182W      FAS1

YLR003C

YLR004C

YLR005W       SSL1

YLR023C

YLR208W       SEC13

YLR249W       YEF3

YLR325C        RPL38

YLR326W

YLR406C        RPL31B

YLR407W

YLR413W

YLR452C        SST2

YMR026C       PEX12

YMR027W      HRT2

YMR092C       AIP1

YMR093W      UTP15

YMR205C       PFK2

YMR206W

YNL186W      UBP10

YOR032C       HMS1

YOR103C       OST2

YOR104W      PIN2

YOR113W      AZF1

YPL075W       GCR1

YPR057W       BRR1

 

Genes Not Found:

 

SNR38

YLR406C-A

YLR412C-A

YOR032W-A

MIPS Functional Classification

Category          p-value In Category from Cluster          k          f

 

 

 

MIPS Phenotypes

Category          p-value In Category from Cluster          k          f

 

 

 

MIPS Subcellular Localization

Category          p-value In Category from Cluster          k          f

 

 

 

MIPS Protein Complexes

Category          p-value In Category from Cluster          k          f

 

 

 

MIPS Protein Classes

Category          p-value In Category from Cluster          k          f

 

 

 

GO Molecular Function

Category          p-value In Category from Cluster          k          f

 

 

 

GO Biological Process

Category          p-value In Category from Cluster          k          f

 

 

 

GO Cellular Component

Category          p-value In Category from Cluster          k          f

 

 

 

SMART Domains

Category          p-value In Category from Cluster          k          f

 

 

 

PFam-A Domains

Category          p-value In Category from Cluster          k          f

 

 

 

Yeast Two Hybrid - Uetz

Category          p-value In Category from Cluster          k          f

 

 

 

Yeast Two Hybrid - Ito (core)

Category          p-value In Category from Cluster          k          f

 

 

 

Yeast Two Hybrid - Ito (full)

Category          p-value In Category from Cluster          k          f

 

 

 

Synthetic Genetic Array Analysis

Category          p-value In Category from Cluster          k          f

 

 

 

MDS Proteomics Complexes

Category          p-value In Category from Cluster          k          f

 

 

 

Cellzome Complexes

Category          p-value In Category from Cluster          k          f

 

 

 

Proteome Localization--Observed

Category          p-value In Category from Cluster          k          f

 

 

 

Proteome Localization--Predicted+Observed

Category          p-value In Category from Cluster          k          f

 

 

 

Deletions Consortium (Essentiality, Morphology)

Category          p-value In Category from Cluster          k          f

 

 

 

Yeast Fitness Data

Category          p-value In Category from Cluster          k          f

 

 

 

Published Complexes

Category          p-value In Category from Cluster          k          f

 

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Rap1-PBMandnotLeeORLiebChIP-exact.FunSpec.txt

Input Cluster (n=5)

YBL049W

YER047C        SAP1

YJR073C         OPI3

YJR074W        MOG1

YOR032C       HMS1

 

Genes Not Found:

 

YOR032W-A

MIPS Functional Classification

Category          p-value In Category from Cluster          k          f

 

 

 

MIPS Phenotypes

Category          p-value In Category from Cluster          k          f

 

 

 

MIPS Subcellular Localization

Category          p-value In Category from Cluster          k          f

 

 

 

MIPS Protein Complexes

Category          p-value In Category from Cluster          k          f

 

 

 

MIPS Protein Classes

Category          p-value In Category from Cluster          k          f

 

 

 

GO Molecular Function

Category          p-value In Category from Cluster          k          f

 

 

 

GO Biological Process

Category          p-value In Category from Cluster          k          f

 

 

 

GO Cellular Component

Category          p-value In Category from Cluster          k          f

 

 

 

SMART Domains

Category          p-value In Category from Cluster          k          f

 

 

 

PFam-A Domains

Category          p-value In Category from Cluster          k          f

 

 

 

Yeast Two Hybrid - Uetz

Category          p-value In Category from Cluster          k          f

 

 

 

Yeast Two Hybrid - Ito (core)

Category          p-value In Category from Cluster          k          f

 

 

 

Yeast Two Hybrid - Ito (full)

Category          p-value In Category from Cluster          k          f

 

 

 

Synthetic Genetic Array Analysis

Category          p-value In Category from Cluster          k          f

 

 

 

MDS Proteomics Complexes

Category          p-value In Category from Cluster          k          f

 

 

 

Cellzome Complexes

Category          p-value In Category from Cluster          k          f

 

 

 

Proteome Localization--Observed

Category          p-value In Category from Cluster          k          f

 

 

 

Proteome Localization--Predicted+Observed

Category          p-value In Category from Cluster          k          f

 

 

 

Deletions Consortium (Essentiality, Morphology)

Category          p-value In Category from Cluster          k          f

 

 

 

Yeast Fitness Data

Category          p-value In Category from Cluster          k          f

 

 

 

Published Complexes

Category          p-value In Category from Cluster          k          f


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Rap1-LeeORLiebChIPandnotPBM-alldata.FunSpec.txt

 Input Cluster (n=144)

YBL020W       RFT1

YBL021C        HAP3

YBL069W       AST1

YBL074C        AAR2

YBL081W

YBL082C        RHK1

YBL092W       RPL32

YBL093C        ROX3

YBL108C-A

YBL111C

YBR046C        ZTA1

YBR047W

YBR084C-A   RPL19A

YBR085W       AAC3

YCR024C-A   PMP1

YCR031C       RPS14A

YCR095C

YCR096C       HMRA2

YCR097W      HMRA1

YDL035C        GPR1

YDL055C        PSA1

YDL130W-A  STF1

YDL133C-A   RPL41B

YDL191W       RPL35A

YDR025W      RPS11A

YDR042C

YDR063W

YDR100W

YDR312W      SSF2

YDR541C

YDR542W

YDR545W      YRF1-1

YEL007W

YEL009C        GCN4

YEL034W       HYP2

YEL035C        UTR5

YEL036C        ANP1

YEL056W       HAT2

YEL057C

YEL072W       RMD6

YEL073C

YEL075C

YER045C        ACA1

YER046W       SPO73

YER189W

YER190W       YRF1-2

YFL014W       HSP12

YFL016C        MDJ1

YFR017C

YGL076C        RPL7A

YGL141W       HUL5

YGL142C        GPI10

YGL258W       VEL1

YGL258W-A

YGL263W       COS12

YGR084C       MRP13

YGR159C       NSR1

YGR258C       RAD2

YGR260W      TNA1

YGR283C

YHL015W       RPS20

YHL016C        DUR3

YHL044W

YHL046C

YHR091C       MSR1

YHR218W

YIL121W

YIR016W

YJL026W        RNR2

YJL027C

YJL029C         VPS53

YJL133W        MRS3

YJL177W        RPL17B

YJL178C

YJR132W        NMD5

YKL039W      PTM1

YKL040C       NFU1

YKL062W      MSN4

YKL063C

YKL224C

YLL043W       FPS1

YLL045C        RPL8B

YLL064C

YLR183C        TOS4

YLR185W       RPL37A

YLR287C

YLR310C        CDC25

YLR333C        RPS25B

YLR335W       NUP2

YLR337C        VRP1

YLR340W       RPP0

YLR344W       RPL26A

YLR368W       MDM30

YLR389C        STE23

YLR390W       ECM19

YLR399C        BDF1

YLR401C

YLR403W       SFP1

YLR460C

YLR461W       PAU4

YLR462W

YML088W      UFO1

YML091C       RPM2

YMR081C       ISF1

YMR083W      ADH3

YMR099C

YMR100W      MUB1

YMR224C       MRE11

YMR325W

YNL066W      SUN4

YNL162W      RPL42A

YNL162W-A

YNL163C       RIA1

YNL178W      RPS3

YNL180C       RHO5

YNL190W

YNL201C       PSY2

YNL329C       PEX6

YNL336W      COS1

YNL339C       YRF1-6

YNR069C

YNR070W      PDR18

YOL082W      CVT19

YOL084W      PHM7

YOL086C       ADH1

YOR100C       CRC1

YOR101W      RAS1

YOR236W      DFR1

YOR342C

YOR344C       TYE7

YOR354C       MSC6

YOR355W      GDS1

YOR387C

YPL079W       RPL21B

YPL095C

YPL144W

YPL145C        KES1

YPL189W       GUP2

YPL190C        NAB3

YPL226W       NEW1

YPL227C        ALG5

YPR131C        NAT3

YPR132W       RPS23B

YPR202W

 

Genes Not Found:

 

SNR39B

SNR47

TE%28UUC%29L

TK%28UUU%29D

TL%28UAA%29B1

TM%28CAU%29J1

TP%28UGG%29O3

TR%28CCG%29L

TT%28AGU%29C

YCR024C-B

YER188C-A

YGL188C-A

YHL015W-A

YJL133C-A

YNL024C-A

YOR343W-A

YOR343W-B

YPL189C-A

MIPS Functional Classification

Category          p-value In Category from Cluster          k          f

ribosome biogenesis      3.66138e-07    RPL32 RPL19A RPS14A RPL41B RPL35A RPS11A RPL7A MRP13 RPS20 RPL17B RPL8B RPL37A RPS25B RPP0 RPL26A RPL42A RPS3 RPL21B RPS23B          19        215

PROTEIN SYNTHESIS          5.94863e-06    RPL32 RPL19A RPS14A RPL41B RPL35A RPS11A HYP2 RPL7A MRP13 RPS20 MSR1 RPL17B RPL8B RPL37A RPS25B RPP0 RPL26A RPL42A RIA1 RPS3 RPL21B NEW1 RPS23B           23        359

cytoplasm         0.000122942   RPL32 RPL19A RPS14A RPL41B RPL35A RPS11A HYP2 HAT2 RPL7A RPS20 RNR2 RPL17B MSN4 RPL8B RPL37A RPS25B RPP0 RPL26A RPL42A RPS3 PEX6 ADH1 RAS1 DFR1 RPL21B KES1 RPS23B            27        554

 

 

 

MIPS Phenotypes

Category          p-value In Category from Cluster          k          f

 

 

 

MIPS Subcellular Localization

Category          p-value In Category from Cluster          k          f

cytoplasm         0.000872487   RPL32 RPL19A RPS14A RPL41B RPL35A RPS11A HYP2 HAT2 RPL7A RPS20 RNR2 RPL17B MSN4 RPL8B RPL37A RPS25B RPP0 RPL26A RPL42A RPS3 PEX6 ADH1 DFR1 RPL21B KES1 RPS23B           26        593

 

 

 

MIPS Protein Complexes

Category          p-value In Category from Cluster          k          f

Cytoplasmic ribosomes 1.69885e-09    RPL32 RPL19A RPS14A RPL41B RPL35A RPS11A RPL7A RPS20 RPL17B RPL8B RPL37A RPS25B RPP0 RPL26A RPL42A RPS3 RPL21B RPS23B             18        138

cytoplasmic ribosomal large subunit       2.48466e-07    RPL32 RPL19A RPL41B RPL35A RPL7A RPL17B RPL8B RPL37A RPP0 RPL26A RPL42A RPL21B    12        81

Translation complexes   4.5575e-07      RPL32 RPL19A RPS14A RPL41B RPL35A RPS11A HYP2 RPL7A MRP13 RPS20 RPL17B RPL8B RPL37A RPS25B RPP0 RPL26A RPL42A RPS3 RPL21B RPS23B          20        240

 

 

 

MIPS Protein Classes

Category          p-value In Category from Cluster          k          f

 

 

 

GO Molecular Function

Category          p-value In Category from Cluster          k          f

structural constituent of ribosome [GO:0003735]          1.86688e-07    RPL32 RPL19A RPS14A RPL41B RPL35A RPS11A RPL7A MRP13 RPS20 RPL17B RPL8B RPL37A RPS25B RPP0 RPL26A RPL42A RPS3 RPL21B RPS23B             19        206

structural molecule [GO:0005198]        2.33686e-05    RPL32 RPL19A RPS14A RPL41B RPL35A RPS11A RPL7A MRP13 RPS20 RPL17B RPL8B RPL37A RPS25B NUP2 RPP0 RPL26A RPL42A RPS3 RPL21B RPS23B          20            310

 

 

 

GO Biological Process

Category          p-value In Category from Cluster          k          f

protein biosynthesis [GO:0006412]       1.64379e-07    RFT1 RHK1 RPL32 RPL19A RPS14A PSA1 RPL41B RPL35A RPS11A HYP2 ANP1 RPL7A GPI10 MRP13 RPS20 MSR1 RPL17B RPL8B RPL37A RPS25B RPP0 RPL26A RPM2 RPL42A RPS3 RPL21B ALG5 RPS23B         28        415

macromolecule biosynthesis [GO:0009059]      2.33455e-07    RFT1 RHK1 RPL32 RPL19A RPS14A PSA1 RPL41B RPL35A RPS11A HYP2 ANP1 RPL7A GPI10 MRP13 RPS20 MSR1 RPL17B RPL8B RPL37A RPS25B RPP0 RPL26A RPM2 RPL42A RPS3 RPL21B ALG5 RPS23B       28        422

 

 

 

GO Cellular Component

Category          p-value In Category from Cluster          k          f

cytosolic ribosome (sensu Eukarya) [GO:0005830]       7.39463e-09    RPL32 RPL19A RPS14A RPL41B RPL35A RPS11A RPL7A RPS20 RPL17B RPL8B RPL37A RPS25B RPP0 RPL26A RPL42A RPS3 RPL21B RPS23B       18            151

cytosolic large ribosomal subunit (sensu Eukarya) [GO:0005842]          3.27111e-07    RPL32 RPL19A RPL41B RPL35A RPL7A RPL17B RPL8B RPL37A RPP0 RPL26A RPL42A RPL21B             12        83

ribosome [GO:0005840]          1.44416e-06    RPL32 RPL19A RPS14A RPL41B RPL35A RPS11A HYP2 RPL7A MRP13 RPS20 RPL17B RPL8B RPL37A RPS25B RPP0 RPL26A RPL42A RPS3 RPL21B RPS23B         20        258

cytosol [GO:0005829] 6.71167e-06    RPL32 RPL19A RPS14A RPL41B RPL35A RPS11A RPL7A RPS20 RNR2 RPL17B RPL8B RPL37A RPS25B RPP0 RPL26A RPL42A RPS3 ADH1 DFR1 RPL21B RPS23B             21        310

large ribosomal subunit [GO:0015934]  2.03378e-05    RPL32 RPL19A RPL41B RPL35A RPL7A RPL17B RPL8B RPL37A RPP0 RPL26A RPL42A RPL21B    12        122

 

 

 

SMART Domains

Category          p-value In Category from Cluster          k          f

 

 

 

PFam-A Domains

Category          p-value In Category from Cluster          k          f

 

 

 

Yeast Two Hybrid - Uetz

Category          p-value In Category from Cluster          k          f

 

 

 

Yeast Two Hybrid - Ito (core)

Category          p-value In Category from Cluster          k          f

 

 

 

Yeast Two Hybrid - Ito (full)

Category          p-value In Category from Cluster          k          f

 

 

 

Synthetic Genetic Array Analysis

Category          p-value In Category from Cluster          k          f

 

 

 

MDS Proteomics Complexes

Category          p-value In Category from Cluster          k          f

 

 

 

Cellzome Complexes

Category          p-value In Category from Cluster          k          f

 

 

 

Proteome Localization--Observed

Category          p-value In Category from Cluster          k          f

 

 

 

Proteome Localization--Predicted+Observed

Category          p-value In Category from Cluster          k          f

 

 

 

Deletions Consortium (Essentiality, Morphology)

Category          p-value In Category from Cluster          k          f

 

 

 

Yeast Fitness Data

Category          p-value In Category from Cluster          k          f

 

 

 

Published Complexes

Category          p-value In Category from Cluster          k          f


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Rap1-LeeORLiebChIPandnotPBM-2SD.FunSpec.txt

 Input Cluster (n=34)

YBL081W

YBL082C        RHK1

YBL092W       RPL32

YBL093C        ROX3

YDR042C

YEL056W       HAT2

YEL057C

YFR017C

YGL076C        RPL7A

YGR159C       NSR1

YGR258C       RAD2

YGR260W      TNA1

YHL015W       RPS20

YHL016C        DUR3

YJL133W        MRS3

YJL177W        RPL17B

YJL178C

YMR099C

YMR100W      MUB1

YNL162W      RPL42A

YNL162W-A

YNL163C       RIA1

YNL178W      RPS3

YNL180C       RHO5

YNL190W

YOR100C       CRC1

YOR101W      RAS1

YOR344C       TYE7

YPL144W

YPL145C        KES1

YPL189W       GUP2

YPL190C        NAB3

YPL226W       NEW1

YPL227C        ALG5

 

Genes Not Found:

 

SNR39B

SNR47

TP%28UGG%29O3

YHL015W-A

YJL133C-A

YPL189C-A

MIPS Functional Classification

Category          p-value In Category from Cluster          k          f

 

 

 

MIPS Phenotypes

Category          p-value In Category from Cluster          k          f

 

 

 

MIPS Subcellular Localization

Category          p-value In Category from Cluster          k          f

 

 

 

MIPS Protein Complexes

Category          p-value In Category from Cluster          k          f

Cytoplasmic ribosomes 8.27604e-05    RPL32 RPL7A RPS20 RPL17B RPL42A RPS3         6          138

 

 

 

MIPS Protein Classes

Category          p-value In Category from Cluster          k          f

 

 

 

GO Molecular Function

Category          p-value In Category from Cluster          k          f

 

 

 

GO Biological Process

Category          p-value In Category from Cluster          k          f

 

 

 

GO Cellular Component

Category          p-value In Category from Cluster          k          f

cytosolic ribosome (sensu Eukarya) [GO:0005830]       0.000136375   RPL32 RPL7A RPS20 RPL17B RPL42A RPS3             6          151

 

 

 

SMART Domains

Category          p-value In Category from Cluster          k          f

 

 

 

PFam-A Domains

Category          p-value In Category from Cluster          k          f

 

 

 

Yeast Two Hybrid - Uetz

Category          p-value In Category from Cluster          k          f

 

 

 

Yeast Two Hybrid - Ito (core)

Category          p-value In Category from Cluster          k          f

 

 

 

Yeast Two Hybrid - Ito (full)

Category          p-value In Category from Cluster          k          f

 

 

 

Synthetic Genetic Array Analysis

Category          p-value In Category from Cluster          k          f

 

 

 

MDS Proteomics Complexes

Category          p-value In Category from Cluster          k          f

 

 

 

Cellzome Complexes

Category          p-value In Category from Cluster          k          f

 

 

 

Proteome Localization--Observed

Category          p-value In Category from Cluster          k          f

 

 

 

Proteome Localization--Predicted+Observed

Category          p-value In Category from Cluster          k          f

 

 

 

Deletions Consortium (Essentiality, Morphology)

Category          p-value In Category from Cluster          k          f

 

 

 

Yeast Fitness Data

Category          p-value In Category from Cluster          k          f

 

 

 

Published Complexes

Category          p-value In Category from Cluster          k          f


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Rap1-LeeORLiebChIPandnotPBM-exact.FunSpec.txt

Input Cluster (n=4)

YGR258C       RAD2

YGR260W      TNA1

YPL144W

YPL145C        KES1

 

Genes Not Found:

 

MIPS Functional Classification

Category          p-value In Category from Cluster          k          f

 

 

 

MIPS Phenotypes

Category          p-value In Category from Cluster          k          f

 

 

 

MIPS Subcellular Localization

Category          p-value In Category from Cluster          k          f

 

 

 

MIPS Protein Complexes

Category          p-value In Category from Cluster          k          f

 

 

 

MIPS Protein Classes

Category          p-value In Category from Cluster          k          f

 

 

 

GO Molecular Function

Category          p-value In Category from Cluster          k          f

 

 

 

GO Biological Process

Category          p-value In Category from Cluster          k          f

 

 

 

GO Cellular Component

Category          p-value In Category from Cluster          k          f

 

 

 

SMART Domains

Category          p-value In Category from Cluster          k          f

 

 

 

PFam-A Domains

Category          p-value In Category from Cluster          k          f

 

 

 

Yeast Two Hybrid - Uetz

Category          p-value In Category from Cluster          k          f

 

 

 

Yeast Two Hybrid - Ito (core)

Category          p-value In Category from Cluster          k          f

 

 

 

Yeast Two Hybrid - Ito (full)

Category          p-value In Category from Cluster          k          f

 

 

 

Synthetic Genetic Array Analysis

Category          p-value In Category from Cluster          k          f

 

 

 

MDS Proteomics Complexes

Category          p-value In Category from Cluster          k          f

 

 

 

Cellzome Complexes

Category          p-value In Category from Cluster          k          f

 

 

 

Proteome Localization--Observed

Category          p-value In Category from Cluster          k          f

 

 

 

Proteome Localization--Predicted+Observed

Category          p-value In Category from Cluster          k          f

 

 

 

Deletions Consortium (Essentiality, Morphology)

Category          p-value In Category from Cluster          k          f

 

 

 

Yeast Fitness Data

Category          p-value In Category from Cluster          k          f

 

 

 

Published Complexes

Category          p-value In Category from Cluster          k          f

 

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Mig1-PBM-alldata.FunSpec.txt

 Input Cluster (n=85)

YBR033W       EDS1

YBR050C        REG2

YBR298C        MAL31

YBR299W       MAL32

YCR005C       CIT2

YDL079C        MRK1

YDL093W       PMT5

YDL214C        PRR2

YDR109C

YDR110W      FOB1

YDR342C       HXT7

YDR343C       HXT6

YDR516C       EMI2

YDR517W      GRH1

YFL053W       DAK2

YFL054C

YFR017C

YFR053C        HXK1

YFR055W

YGL122C        NAB2

YGL253W       HXK2

YGR067C

YGR241C       YAP1802

YGR243W

YGR294W

YHL032C        GUT1

YHR033W

YHR043C       DOG2

YHR057C       CPR2

YHR094C       HXT1

YIL024C

YIL057C

YIR016W

YJR056C

YKL055C       OAR1

YKL062W      MSN4

YKL063C

YKL217W      JEN1

YKL218C       SRY1

YKR075C

YKR076W      ECM4

YKR098C       UBP11

YKR099W      BAS1

YKR104W

YLR023C

YLR036C

YLR069C        MEF1

YLR071C        RGR1

YLR072W

YLR089C

YLR090W       XDJ1

YLR151C        PCD1

YLR191W       PEX13

YLR273C        PIG1

YLR274W       CDC46

YLR377C        FBP1

YML009C       MRPL39

YML048W      GSF2

YML049C       RSE1

YML106W      URA5

YML107C

YMR011W      HXT2

YMR052W      FAR3

YMR205C       PFK2

YMR206W

YMR272C       SCS7

YNL081C

YNL106C       INP52

YNL185C       MRPL19

YNL299W      TRF5

YNR002C       FUN34

YNR071C

YNR072W      HXT17

YOL052C-A   DDR2

YOL156W      HXT11

YOL157C

YOR180C       DCI1

YOR181W      LAS17

YOR234C       RPL33B

YOR356W

YPL134C        ODC1

YPL200W       CSM4

YPL201C

YPL248C        GAL4

YPR171W

 

Genes Not Found:

 

TA%28AGC%29K2

TK%28UUU%29L

TL%28UAA%29K

TS%28UGA%29I

YBR298C-A

YMR050C

YMR051C

YMR194C-B

YMR272W-B

MIPS Functional Classification

Category          p-value In Category from Cluster          k          f

C-compound and carbohydrate metabolism      2.74891e-13    REG2 MAL31 MAL32 CIT2 PMT5 HXT7 HXT6 EMI2 DAK2 HXK1 HXK2 GUT1 DOG2 HXT1 MSN4 JEN1 RGR1 PIG1 FBP1 GSF2 HXT2 PFK2 FUN34 YNR071C HXT17 HXT11 YOL157C GAL4       28        415

METABOLISM           4.36139e-10    REG2 MAL31 MAL32 CIT2 PMT5 HXT7 HXT6 EMI2 DAK2 HXK1 YFR055W HXK2 GUT1 YHR033W DOG2 HXT1 OAR1 MSN4 JEN1 SRY1 BAS1 RGR1 YLR089C PCD1 PIG1 FBP1 GSF2 URA5 HXT2 PFK2 SCS7 INP52 FUN34 YNR071C HXT17 HXT11 YOL157C DCI1 GAL4            39            1066

C-compound, carbohydrate transport   6.65238e-08    MAL31 HXT7 HXT6 HXT1 JEN1 HXT2 HXT17 HXT11     8            42

C-compound and carbohydrate transporters     1.40738e-07    MAL31 HXT7 HXT6 HXT1 JEN1 HXT2 HXT17 HXT11             8          46

regulation of C-compound and carbohydrate utilization  3.10606e-05    REG2 HXK2 MSN4 RGR1 PIG1 GSF2 PFK2 FUN34 GAL4             9          120

C-compound and carbohydrate utilization          4.23195e-05    MAL32 CIT2 PMT5 EMI2 DAK2 HXK1 HXK2 GUT1 DOG2 FBP1 PFK2 YNR071C YOL157C     13        261

cellular import   5.54408e-05    MAL31 HXT7 HXT6 YAP1802 HXT1 HXT2 HXT17 HXT11          8          100

 

 

 

MIPS Phenotypes

Category          p-value In Category from Cluster          k          f

 

 

 

MIPS Subcellular Localization

Category          p-value In Category from Cluster          k          f

 

 

 

MIPS Protein Complexes

Category          p-value In Category from Cluster          k          f

 

 

 

MIPS Protein Classes

Category          p-value In Category from Cluster          k          f

 

 

 

GO Molecular Function

Category          p-value In Category from Cluster          k          f

mannose transporter [GO:0015578]     2.36463e-08    HXT7 HXT6 HXT1 HXT2 HXT17 HXT11     6          15

glucose transporter [GO:0005355]       5.7214e-08      HXT7 HXT6 HXT1 HXT2 HXT17 HXT11     6          17

carbohydrate transporter [GO:0015144]           6.18377e-08    MAL31 HXT7 HXT6 HXT1 HXT2 HXT17 HXT11   7            28

monosaccharide transporter [GO:0015145]      1.22735e-07    HXT7 HXT6 HXT1 HXT2 HXT17 HXT11     6          19

hexose transporter [GO:0015149]        1.22735e-07    HXT7 HXT6 HXT1 HXT2 HXT17 HXT11     6          19

fructose transporter [GO:0005353]       7.41528e-07    HXT7 HXT6 HXT2 HXT17 HXT11   5          14

 

 

 

GO Biological Process

Category          p-value In Category from Cluster          k          f

hexose transport [GO:0008645]           9.51197e-09    MAL31 HXT7 HXT6 HXT1 HXT2 HXT17 HXT11   7          22

monosaccharide transport [GO:0015749]         9.51197e-09    MAL31 HXT7 HXT6 HXT1 HXT2 HXT17 HXT11   7            22

carbohydrate transport [GO:0008643]  1.04018e-07    MAL31 HXT7 HXT6 HXT1 HXT2 HXT17 HXT11   7          30

alcohol metabolism [GO:0006066]       2.18488e-05    DAK2 HXK1 HXK2 GUT1 DOG2 FBP1 PFK2 GAL4         8            88

 

 

 

GO Cellular Component

Category          p-value In Category from Cluster          k          f

 

 

 

SMART Domains

Category          p-value In Category from Cluster          k          f

 

 

 

PFam-A Domains

Category          p-value In Category from Cluster          k          f

PF00083 (sugar_tr)      4.42638e-07    MAL31 HXT7 HXT6 HXT1 JEN1 HXT2 HXT17 HXT11     8          53

PF03727 (hexokinase2)           9.5407e-06      EMI2 HXK1 HXK2    3          4

PF00349 (hexokinase) 9.5407e-06      EMI2 HXK1 HXK2    3          4

 

 

 

Yeast Two Hybrid - Uetz

Category          p-value In Category from Cluster          k          f

 

 

 

Yeast Two Hybrid - Ito (core)

Category          p-value In Category from Cluster          k          f

 

 

 

Yeast Two Hybrid - Ito (full)

Category          p-value In Category from Cluster          k          f

 

 

 

Synthetic Genetic Array Analysis

Category          p-value In Category from Cluster          k          f

 

 

 

MDS Proteomics Complexes

Category          p-value In Category from Cluster          k          f

 

 

 

Cellzome Complexes

Category          p-value In Category from Cluster          k          f

 

 

 

Proteome Localization--Observed

Category          p-value In Category from Cluster          k          f

 

 

 

Proteome Localization--Predicted+Observed

Category          p-value In Category from Cluster          k          f

 

 

 

Deletions Consortium (Essentiality, Morphology)

Category          p-value In Category from Cluster          k          f

Morphology - WT        0.00231468     EDS1 REG2 MAL31 MAL32 CIT2 PRR2 YDR109C FOB1 DAK2 YFL054C YFR017C HXK1 YFR055W HXK2 YAP1802 YGR243W GUT1 YHR033W DOG2 CPR2 HXT1 YIL024C YIL057C YIR016W YJR056C OAR1 MSN4 YKL063C JEN1 SRY1 YKR075C ECM4 UBP11 BAS1 YKR104W YLR023C YLR036C YLR072W YLR089C XDJ1 PCD1 PEX13 PIG1 FBP1 MRPL39 GSF2 URA5 YML107C HXT2 PFK2 YMR206W INP52 TRF5 FUN34 YNR071C HXT17 RPL33B YOR356W ODC1 CSM4 YPL201C GAL4 YPR171W       63        3689

 

 

 

Yeast Fitness Data

Category          p-value In Category from Cluster          k          f

 

 

 

Published Complexes

Category          p-value In Category from Cluster          k          f


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Mig1-PBM-2SD.FunSpec.txt

 Input Cluster (n=35)

YCR005C       CIT2

YDL079C        MRK1

YDR342C       HXT7

YDR343C       HXT6

YDR516C       EMI2

YDR517W      GRH1

YFR017C

YFR053C        HXK1

YFR055W

YGL253W       HXK2

YHL032C        GUT1

YIL024C

YKL062W      MSN4

YKL063C

YKL217W      JEN1

YKL218C       SRY1

YKR075C

YKR076W      ECM4

YKR098C       UBP11

YKR099W      BAS1

YLR023C

YLR089C

YLR090W       XDJ1

YLR377C        FBP1

YML048W      GSF2

YML049C       RSE1

YML106W      URA5

YML107C

YMR205C       PFK2

YMR206W

YNR002C       FUN34

YOR356W

YPL200W       CSM4

YPL201C

YPR171W

 

Genes Not Found:

 

TK%28UUU%29L

MIPS Functional Classification

Category          p-value In Category from Cluster          k          f

C-compound and carbohydrate metabolism      1.50736e-07    CIT2 HXT7 HXT6 EMI2 HXK1 HXK2 GUT1 MSN4 JEN1 FBP1 GSF2 PFK2 FUN34        13        415

METABOLISM           3.05234e-06    CIT2 HXT7 HXT6 EMI2 HXK1 YFR055W HXK2 GUT1 MSN4 JEN1 SRY1 BAS1 YLR089C FBP1 GSF2 URA5 PFK2 FUN34   18        1066

glycolysis and gluconeogenesis  3.77571e-05    HXK1 HXK2 FBP1 PFK2      4          35

 

 

 

MIPS Phenotypes

Category          p-value In Category from Cluster          k          f

 

 

 

MIPS Subcellular Localization

Category          p-value In Category from Cluster          k          f

 

 

 

MIPS Protein Complexes

Category          p-value In Category from Cluster          k          f

 

 

 

MIPS Protein Classes

Category          p-value In Category from Cluster          k          f

 

 

 

GO Molecular Function

Category          p-value In Category from Cluster          k          f

hexokinase [GO:0004396]       3.03038e-05    HXK1 HXK2 2          2

 

 

 

GO Biological Process

Category          p-value In Category from Cluster          k          f

 

 

 

GO Cellular Component

Category          p-value In Category from Cluster          k          f

 

 

 

SMART Domains

Category          p-value In Category from Cluster          k          f

 

 

 

PFam-A Domains

Category          p-value In Category from Cluster          k          f

PF03727 (hexokinase2)           6.36037e-07    EMI2 HXK1 HXK2    3          4

PF00349 (hexokinase) 6.36037e-07    EMI2 HXK1 HXK2    3          4

 

 

 

Yeast Two Hybrid - Uetz

Category          p-value In Category from Cluster          k          f

 

 

 

Yeast Two Hybrid - Ito (core)

Category          p-value In Category from Cluster          k          f

 

 

 

Yeast Two Hybrid - Ito (full)

Category          p-value In Category from Cluster          k          f

 

 

 

Synthetic Genetic Array Analysis

Category          p-value In Category from Cluster          k          f

 

 

 

MDS Proteomics Complexes

Category          p-value In Category from Cluster          k          f

YNL032W (SIW14)    3.03038e-05    HXT6 EMI2    2          2

YLR019W (PSR2)      3.03038e-05    HXT7 HXT6    2          2

 

 

 

Cellzome Complexes

Category          p-value In Category from Cluster          k          f

 

 

 

Proteome Localization--Observed

Category          p-value In Category from Cluster          k          f

 

 

 

Proteome Localization--Predicted+Observed

Category          p-value In Category from Cluster          k          f

cyt        0.0120153       HXT7 HXT6 EMI2 GRH1 YFR017C HXK1 YFR055W HXK2 GUT1 YIL024C JEN1 SRY1 YKR075C ECM4 UBP11 XDJ1 FBP1 GSF2 URA5 PFK2 YMR206W FUN34 CSM4 YPL201C YPR171W        25            3210

 

 

 

Deletions Consortium (Essentiality, Morphology)

Category          p-value In Category from Cluster          k          f

Morphology - WT        0.00222153     CIT2 YFR017C HXK1 YFR055W HXK2 GUT1 YIL024C MSN4 YKL063C JEN1 SRY1 YKR075C ECM4 UBP11 BAS1 YLR023C YLR089C XDJ1 FBP1 GSF2 URA5 YML107C PFK2 YMR206W FUN34 YOR356W CSM4 YPL201C YPR171W           29        3689

 

 

 

Yeast Fitness Data

Category          p-value In Category from Cluster          k          f

 

 

 

Published Complexes

Category          p-value In Category from Cluster          k          f


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Mig1-PBM-exact.FunSpec.txt

 

Input Cluster (n=14)

YCR005C       CIT2

YDR343C       HXT6

YDR516C       EMI2

YDR517W      GRH1

YHL032C        GUT1

YKL062W      MSN4

YKL063C

YLR089C

YLR090W       XDJ1

YML048W      GSF2

YML049C       RSE1

YNR002C       FUN34

YOR356W

YPR171W

 

Genes Not Found:

 

MIPS Functional Classification

Category          p-value In Category from Cluster          k          f

C-compound and carbohydrate metabolism      1.21278e-05    CIT2 HXT6 EMI2 GUT1 MSN4 GSF2 FUN34         7            415

 

 

 

MIPS Phenotypes

Category          p-value In Category from Cluster          k          f

 

 

 

MIPS Subcellular Localization

Category          p-value In Category from Cluster          k          f

 

 

 

MIPS Protein Complexes

Category          p-value In Category from Cluster          k          f

 

 

 

MIPS Protein Classes

Category          p-value In Category from Cluster          k          f

 

 

 

GO Molecular Function

Category          p-value In Category from Cluster          k          f

 

 

 

GO Biological Process

Category          p-value In Category from Cluster          k          f

 

 

 

GO Cellular Component

Category          p-value In Category from Cluster          k          f

 

 

 

SMART Domains

Category          p-value In Category from Cluster          k          f

 

 

 

PFam-A Domains

Category          p-value In Category from Cluster          k          f

 

 

 

Yeast Two Hybrid - Uetz

Category          p-value In Category from Cluster          k          f

 

 

 

Yeast Two Hybrid - Ito (core)

Category          p-value In Category from Cluster          k          f

 

 

 

Yeast Two Hybrid - Ito (full)

Category          p-value In Category from Cluster          k          f

 

 

 

Synthetic Genetic Array Analysis

Category          p-value In Category from Cluster          k          f

 

 

 

MDS Proteomics Complexes

Category          p-value In Category from Cluster          k          f

YNL032W (SIW14)    4.6347e-06      HXT6 EMI2    2          2

YDL100C (ARR4)      6.91661e-05    MSN4 GSF2   2          6

 

 

 

Cellzome Complexes

Category          p-value In Category from Cluster          k          f

 

 

 

Proteome Localization--Observed

Category          p-value In Category from Cluster          k          f

 

 

 

Proteome Localization--Predicted+Observed

Category          p-value In Category from Cluster          k          f

 

 

 

Deletions Consortium (Essentiality, Morphology)

Category          p-value In Category from Cluster          k          f

 

 

 

Yeast Fitness Data

Category          p-value In Category from Cluster          k          f

 

 

 

Published Complexes

Category          p-value In Category from Cluster          k          f


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Mig1-ChIP-alldata.FunSpec.txt

Input Cluster (n=17)

YCR073C       SSK22

YCR073W-A  SOL2

YDL149W       APG9

YDR441C       APT2

YEL066W       HPA3

YEL069C        HXT13

YEL070W

YHR062C       RPP1

YJL214W        HXT8

YJL216C

YLR241W

YMR163C

YMR260C       TIF11

YOL156W      HXT11

YOL157C

YOR178C       GAC1

YPR184W       GDB1

 

Genes Not Found:

 

MIPS Functional Classification

Category          p-value In Category from Cluster          k          f

metabolism of energy reserves (glycogen, trehalose)      2.3172e-06      YJL216C YOL157C GAC1 GDB1     4          37

C-compound and carbohydrate metabolism      4.94371e-06    HXT13 YEL070W HXT8 YJL216C HXT11 YOL157C GAC1 GDB1   8          415

C-compound, carbohydrate transport   0.000178323   HXT13 HXT8 HXT11             3          42

 

 

 

MIPS Phenotypes

Category          p-value In Category from Cluster          k          f

 

 

 

MIPS Subcellular Localization

Category          p-value In Category from Cluster          k          f

 

 

 

MIPS Protein Complexes

Category          p-value In Category from Cluster          k          f

 

 

 

MIPS Protein Classes

Category          p-value In Category from Cluster          k          f

 

 

 

GO Molecular Function

Category          p-value In Category from Cluster          k          f

fructose transporter [GO:0005353]       5.92619e-06    HXT13 HXT8 HXT11             3          14

mannose transporter [GO:0015578]     7.39531e-06    HXT13 HXT8 HXT11             3          15

glucose transporter [GO:0005355]       1.10153e-05    HXT13 HXT8 HXT11             3          17

monosaccharide transporter [GO:0015145]      1.56442e-05    HXT13 HXT8 HXT11             3          19

hexose transporter [GO:0015149]        1.56442e-05    HXT13 HXT8 HXT11             3          19

 

 

 

GO Biological Process

Category          p-value In Category from Cluster          k          f

monosaccharide transport [GO:0015749]         2.4738e-05      HXT13 HXT8 HXT11             3          22

hexose transport [GO:0008645]           2.4738e-05      HXT13 HXT8 HXT11             3          22

 

 

 

GO Cellular Component

Category          p-value In Category from Cluster          k          f

 

 

 

SMART Domains

Category          p-value In Category from Cluster          k          f

Aamy   1.3791e-06      YJL216C YOL157C GDB1    3          9

 

 

 

PFam-A Domains

Category          p-value In Category from Cluster          k          f

 

 

 

Yeast Two Hybrid - Uetz

Category          p-value In Category from Cluster          k          f

 

 

 

Yeast Two Hybrid - Ito (core)

Category          p-value In Category from Cluster          k          f

 

 

 

Yeast Two Hybrid - Ito (full)

Category          p-value In Category from Cluster          k          f

 

 

 

Synthetic Genetic Array Analysis

Category          p-value In Category from Cluster          k          f

 

 

 

MDS Proteomics Complexes

Category          p-value In Category from Cluster          k          f

 

 

 

Cellzome Complexes

Category          p-value In Category from Cluster          k          f

 

 

 

Proteome Localization--Observed

Category          p-value In Category from Cluster          k          f

 

 

 

Proteome Localization--Predicted+Observed

Category          p-value In Category from Cluster          k          f

 

 

 

Deletions Consortium (Essentiality, Morphology)

Category          p-value In Category from Cluster          k          f

 

 

 

Yeast Fitness Data

Category          p-value In Category from Cluster          k          f

 

 

 

Published Complexes

Category          p-value In Category from Cluster          k          f

 


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Mig1-ChIP-2SD.FunSpec.txt:  

 

Input Cluster (n=3)

YEL066W       HPA3

YEL069C        HXT13

YEL070W

 

Genes Not Found:

 

MIPS Functional Classification

Category          p-value In Category from Cluster          k          f

 

 

 

MIPS Phenotypes

Category          p-value In Category from Cluster          k          f

 

 

 

MIPS Subcellular Localization

Category          p-value In Category from Cluster          k          f

 

 

 

MIPS Protein Complexes

Category          p-value In Category from Cluster          k          f

 

 

 

MIPS Protein Classes

Category          p-value In Category from Cluster          k          f

 

 

 

GO Molecular Function

Category          p-value In Category from Cluster          k          f

 

 

 

GO Biological Process

Category          p-value In Category from Cluster          k          f

 

 

 

GO Cellular Component

Category          p-value In Category from Cluster          k          f

 

 

 

SMART Domains

Category          p-value In Category from Cluster          k          f

 

 

 

PFam-A Domains

Category          p-value In Category from Cluster          k          f

 

 

 

Yeast Two Hybrid - Uetz

Category          p-value In Category from Cluster          k          f

 

 

 

Yeast Two Hybrid - Ito (core)

Category          p-value In Category from Cluster          k          f

 

 

 

Yeast Two Hybrid - Ito (full)

Category          p-value In Category from Cluster          k          f

 

 

 

Synthetic Genetic Array Analysis

Category          p-value In Category from Cluster          k          f

 

 

 

MDS Proteomics Complexes

Category          p-value In Category from Cluster          k          f

 

 

 

Cellzome Complexes

Category          p-value In Category from Cluster          k          f

 

 

 

Proteome Localization--Observed

Category          p-value In Category from Cluster          k          f

 

 

 

Proteome Localization--Predicted+Observed

Category          p-value In Category from Cluster          k          f

 

 

 

Deletions Consortium (Essentiality, Morphology)

Category          p-value In Category from Cluster          k          f

 

 

 

Yeast Fitness Data

Category          p-value In Category from Cluster          k          f

 

 

 

Published Complexes

Category          p-value In Category from Cluster          k          f

 

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Mig1-ChIP-exact.FunSpec.txt:  doesn't exist because 0 intergenic regions passed this site conservation criterion

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Mig1-PBMandChIP-alldata.FunSpec.txt

 

Input Cluster (n=2)

YOL156W      HXT11

YOL157C

 

Genes Not Found:

 

MIPS Functional Classification

Category          p-value In Category from Cluster          k          f

 

 

 

MIPS Phenotypes

Category          p-value In Category from Cluster          k          f

 

 

 

MIPS Subcellular Localization

Category          p-value In Category from Cluster          k          f

 

 

 

MIPS Protein Complexes

Category          p-value In Category from Cluster          k          f

 

 

 

MIPS Protein Classes

Category          p-value In Category from Cluster          k          f

 

 

 

GO Molecular Function

Category          p-value In Category from Cluster          k          f

 

 

 

GO Biological Process

Category          p-value In Category from Cluster          k          f

 

 

 

GO Cellular Component

Category          p-value In Category from Cluster          k          f

 

 

 

SMART Domains

Category          p-value In Category from Cluster          k          f

 

 

 

PFam-A Domains

Category          p-value In Category from Cluster          k          f

 

 

 

Yeast Two Hybrid - Uetz

Category          p-value In Category from Cluster          k          f

 

 

 

Yeast Two Hybrid - Ito (core)

Category          p-value In Category from Cluster          k          f

 

 

 

Yeast Two Hybrid - Ito (full)

Category          p-value In Category from Cluster          k          f

 

 

 

Synthetic Genetic Array Analysis

Category          p-value In Category from Cluster          k          f

 

 

 

MDS Proteomics Complexes

Category          p-value In Category from Cluster          k          f

 

 

 

Cellzome Complexes

Category          p-value In Category from Cluster          k          f

 

 

 

Proteome Localization--Observed

Category          p-value In Category from Cluster          k          f

 

 

 

Proteome Localization--Predicted+Observed

Category          p-value In Category from Cluster          k          f

 

 

 

Deletions Consortium (Essentiality, Morphology)

Category          p-value In Category from Cluster          k          f

 

 

 

Yeast Fitness Data

Category          p-value In Category from Cluster          k          f

 

 

 

Published Complexes

Category          p-value In Category from Cluster          k          f


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Mig1-PBMandChIP-2SD.FunSpec.txt: doesn't exist because 0 intergenic regions passed this site conservation criterion

Mig1-PBMandChIP-exact.FunSpec.txt:  doesn't exist because 0 intergenic regions passed this site conservation criterion

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Mig1-PBMandnotChIP-alldata.FunSpec.txt

Input Cluster (n=79)

YBR033W       EDS1

YBR050C        REG2

YBR298C        MAL31

YBR299W       MAL32

YDL079C        MRK1

YDL214C        PRR2

YDR109C

YDR110W      FOB1

YDR342C       HXT7

YDR343C       HXT6

YDR516C       EMI2

YDR517W      GRH1

YFL053W       DAK2

YFL054C

YFR017C

YFR053C        HXK1

YFR055W

YGL122C        NAB2

YGL253W       HXK2

YGR067C

YGR241C       YAP1802

YGR243W

YGR294W

YHL032C        GUT1

YHR033W

YHR043C       DOG2

YHR057C       CPR2

YHR094C       HXT1

YIL024C

YIL057C

YIR016W

YJR056C

YKL055C       OAR1

YKL062W      MSN4

YKL063C

YKL217W      JEN1

YKL218C       SRY1

YKR075C

YKR076W      ECM4

YKR098C       UBP11

YKR099W      BAS1

YKR104W

YLR023C

YLR036C

YLR069C        MEF1

YLR071C        RGR1

YLR072W

YLR089C

YLR090W       XDJ1

YLR151C        PCD1

YLR191W       PEX13

YLR273C        PIG1

YLR274W       CDC46

YLR377C        FBP1

YML009C       MRPL39

YML048W      GSF2

YML049C       RSE1

YML106W      URA5

YML107C

YMR011W      HXT2

YMR052W      FAR3

YMR205C       PFK2

YMR206W

YMR272C       SCS7

YNL081C

YNL106C       INP52

YNL185C       MRPL19

YNL299W      TRF5

YNR002C       FUN34

YNR071C

YNR072W      HXT17

YOL052C-A   DDR2

YOR180C       DCI1

YOR181W      LAS17

YOR356W

YPL134C        ODC1

YPL200W       CSM4

YPL201C

YPL248C        GAL4

 

Genes Not Found:

 

 

TA%28AGC%29K2

TK%28UUU%29L

TL%28UAA%29K

TS%28UGA%29I

YBR298C-A

YMR050C

YMR051C

YMR272W-B

MIPS Functional Classification

Category          p-value In Category from Cluster          k          f

C-compound and carbohydrate metabolism      1.00194e-10    REG2 MAL31 MAL32 HXT7 HXT6 EMI2 DAK2 HXK1 HXK2 GUT1 DOG2 HXT1 MSN4 JEN1 RGR1 PIG1 FBP1 GSF2 HXT2 PFK2 FUN34 YNR071C HXT17 GAL4             24        415

METABOLISM           1.08153e-08    REG2 MAL31 MAL32 HXT7 HXT6 EMI2 DAK2 HXK1 YFR055W HXK2 GUT1 YHR033W DOG2 HXT1 OAR1 MSN4 JEN1 SRY1 BAS1 RGR1 YLR089C PCD1 PIG1 FBP1 GSF2 URA5 HXT2 PFK2 SCS7 INP52 FUN34 YNR071C HXT17 DCI1 GAL4 35        1066

C-compound, carbohydrate transport   7.31152e-07    MAL31 HXT7 HXT6 HXT1 JEN1 HXT2 HXT17      7          42

C-compound and carbohydrate transporters     1.39313e-06    MAL31 HXT7 HXT6 HXT1 JEN1 HXT2 HXT17      7            46

regulation of C-compound and carbohydrate utilization  1.70955e-05    REG2 HXK2 MSN4 RGR1 PIG1 GSF2 PFK2 FUN34 GAL4             9          120

 

 

 

MIPS Phenotypes

Category          p-value In Category from Cluster          k          f

 

 

 

MIPS Subcellular Localization

Category          p-value In Category from Cluster          k          f

 

 

 

MIPS Protein Complexes

Category          p-value In Category from Cluster          k          f

 

 

 

MIPS Protein Classes

Category          p-value In Category from Cluster          k          f

 

 

 

GO Molecular Function

Category          p-value In Category from Cluster          k          f

mannose transporter [GO:0015578]     7.6223e-07      HXT7 HXT6 HXT1 HXT2 HXT17     5          15

carbohydrate transporter [GO:0015144]           1.00035e-06    MAL31 HXT7 HXT6 HXT1 HXT2 HXT17    6          28

glucose transporter [GO:0005355]       1.53992e-06    HXT7 HXT6 HXT1 HXT2 HXT17     5          17

monosaccharide transporter [GO:0015145]      2.83709e-06    HXT7 HXT6 HXT1 HXT2 HXT17     5          19

hexose transporter [GO:0015149]        2.83709e-06    HXT7 HXT6 HXT1 HXT2 HXT17     5          19

fructose transporter [GO:0005353]       2.12756e-05    HXT7 HXT6 HXT2 HXT17    4          14

 

 

 

GO Biological Process

Category          p-value In Category from Cluster          k          f

hexose transport [GO:0008645]           2.10407e-07    MAL31 HXT7 HXT6 HXT1 HXT2 HXT17    6          22

monosaccharide transport [GO:0015749]         2.10407e-07    MAL31 HXT7 HXT6 HXT1 HXT2 HXT17    6          22

carbohydrate transport [GO:0008643]  1.54533e-06    MAL31 HXT7 HXT6 HXT1 HXT2 HXT17    6          30

alcohol metabolism [GO:0006066]       1.26841e-05    DAK2 HXK1 HXK2 GUT1 DOG2 FBP1 PFK2 GAL4         8            88

 

 

 

GO Cellular Component

Category          p-value In Category from Cluster          k          f

 

 

 

SMART Domains

Category          p-value In Category from Cluster          k          f

 

 

 

PFam-A Domains

Category          p-value In Category from Cluster          k          f

PF00083 (sugar_tr)      3.73807e-06    MAL31 HXT7 HXT6 HXT1 JEN1 HXT2 HXT17      7          53

PF03727 (hexokinase2)           7.64419e-06    EMI2 HXK1 HXK2    3          4

PF00349 (hexokinase) 7.64419e-06    EMI2 HXK1 HXK2    3          4

 

 

 

Yeast Two Hybrid - Uetz

Category          p-value In Category from Cluster          k          f

 

 

 

Yeast Two Hybrid - Ito (core)

Category          p-value In Category from Cluster          k          f

 

 

 

Yeast Two Hybrid - Ito (full)

Category          p-value In Category from Cluster          k          f

 

 

 

Synthetic Genetic Array Analysis

Category          p-value In Category from Cluster          k          f

 

 

 

MDS Proteomics Complexes

Category          p-value In Category from Cluster          k          f

 

 

 

Cellzome Complexes

Category          p-value In Category from Cluster          k          f

 

 

 

Proteome Localization--Observed

Category          p-value In Category from Cluster          k          f

 

 

 

Proteome Localization--Predicted+Observed

Category          p-value In Category from Cluster          k          f

 

 

 

Deletions Consortium (Essentiality, Morphology)

Category          p-value In Category from Cluster          k          f

Morphology - WT        0.00105001     EDS1 REG2 MAL31 MAL32 PRR2 YDR109C FOB1 DAK2 YFL054C YFR017C HXK1 YFR055W HXK2 YAP1802 YGR243W GUT1 YHR033W DOG2 CPR2 HXT1 YIL024C YIL057C YIR016W YJR056C OAR1 MSN4 YKL063C JEN1 SRY1 YKR075C ECM4 UBP11 BAS1 YKR104W YLR023C YLR036C YLR072W YLR089C XDJ1 PCD1 PEX13 PIG1 FBP1 MRPL39 GSF2 URA5 YML107C HXT2 PFK2 YMR206W INP52 TRF5 FUN34 YNR071C HXT17 YOR356W ODC1 CSM4 YPL201C GAL4    60            3689

 

 

 

Yeast Fitness Data

Category          p-value In Category from Cluster          k          f

 

 

 

Published Complexes

Category          p-value In Category from Cluster          k          f


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Mig1-PBMandnotChIP-2SD.FunSpec.txt

 Input Cluster (n=33)

YDL079C        MRK1

YDR342C       HXT7

YDR343C       HXT6

YDR516C       EMI2

YDR517W      GRH1

YFR017C

YFR053C        HXK1

YFR055W

YGL253W       HXK2

YHL032C        GUT1

YIL024C

YKL062W      MSN4

YKL063C

YKL217W      JEN1

YKL218C       SRY1

YKR075C

YKR076W      ECM4

YKR098C       UBP11

YKR099W      BAS1

YLR023C

YLR089C

YLR090W       XDJ1

YLR377C        FBP1

YML048W      GSF2

YML049C       RSE1

YML106W      URA5

YML107C

YMR205C       PFK2

YMR206W

YNR002C       FUN34

YOR356W

YPL200W       CSM4

YPL201C

 

Genes Not Found:

 

TK%28UUU%29L

MIPS Functional Classification

Category          p-value In Category from Cluster          k          f

C-compound and carbohydrate metabolism      6.01131e-07    HXT7 HXT6 EMI2 HXK1 HXK2 GUT1 MSN4 JEN1 FBP1 GSF2 PFK2 FUN34     12        415

METABOLISM           5.59904e-06    HXT7 HXT6 EMI2 HXK1 YFR055W HXK2 GUT1 MSN4 JEN1 SRY1 BAS1 YLR089C FBP1 GSF2 URA5 PFK2 FUN34             17        1066

glycolysis and gluconeogenesis  2.97425e-05    HXK1 HXK2 FBP1 PFK2      4          35

 

 

 

MIPS Phenotypes

Category          p-value In Category from Cluster          k          f

 

 

 

MIPS Subcellular Localization

Category          p-value In Category from Cluster          k          f

 

 

 

MIPS Protein Complexes

Category          p-value In Category from Cluster          k          f

 

 

 

MIPS Protein Classes

Category          p-value In Category from Cluster          k          f

 

 

 

GO Molecular Function

Category          p-value In Category from Cluster          k          f

hexokinase [GO:0004396]       2.68914e-05    HXK1 HXK2 2          2

 

 

 

GO Biological Process

Category          p-value In Category from Cluster          k          f

 

 

 

GO Cellular Component

Category          p-value In Category from Cluster          k          f

 

 

 

SMART Domains

Category          p-value In Category from Cluster          k          f

 

 

 

PFam-A Domains

Category          p-value In Category from Cluster          k          f

PF03727 (hexokinase2)           5.30337e-07    EMI2 HXK1 HXK2    3          4

PF00349 (hexokinase) 5.30337e-07    EMI2 HXK1 HXK2    3          4

 

 

 

Yeast Two Hybrid - Uetz

Category          p-value In Category from Cluster          k          f

 

 

 

Yeast Two Hybrid - Ito (core)

Category          p-value In Category from Cluster          k          f

 

 

 

Yeast Two Hybrid - Ito (full)

Category          p-value In Category from Cluster          k          f

 

 

 

Synthetic Genetic Array Analysis

Category          p-value In Category from Cluster          k          f

 

 

 

MDS Proteomics Complexes

Category          p-value In Category from Cluster          k          f

YNL032W (SIW14)    2.68914e-05    HXT6 EMI2    2          2

YLR019W (PSR2)      2.68914e-05    HXT7 HXT6    2          2

 

 

 

Cellzome Complexes

Category          p-value In Category from Cluster          k          f

 

 

 

Proteome Localization--Observed

Category          p-value In Category from Cluster          k          f

 

 

 

Proteome Localization--Predicted+Observed

Category          p-value In Category from Cluster          k          f

cyt        0.00973298     HXT7 HXT6 EMI2 GRH1 YFR017C HXK1 YFR055W HXK2 GUT1 YIL024C JEN1 SRY1 YKR075C ECM4 UBP11 XDJ1 FBP1 GSF2 URA5 PFK2 YMR206W FUN34 CSM4 YPL201C 24        3210

 

 

 

Deletions Consortium (Essentiality, Morphology)

Category          p-value In Category from Cluster          k          f

Morphology - WT        0.00450031     YFR017C HXK1 YFR055W HXK2 GUT1 YIL024C MSN4 YKL063C JEN1 SRY1 YKR075C ECM4 UBP11 BAS1 YLR023C YLR089C XDJ1 FBP1 GSF2 URA5 YML107C PFK2 YMR206W FUN34 YOR356W CSM4 YPL201C             27        3689

 

 

 

Yeast Fitness Data

Category          p-value In Category from Cluster          k          f

 

 

 

Published Complexes

Category          p-value In Category from Cluster          k          f


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Mig1-PBMandnotChIP-exact.FunSpec.txt

 Input Cluster (n=12)

YDR343C       HXT6

YDR516C       EMI2

YDR517W      GRH1

YHL032C        GUT1

YKL062W      MSN4

YKL063C

YLR089C

YLR090W       XDJ1

YML048W      GSF2

YML049C       RSE1

YNR002C       FUN34

YOR356W

 

Genes Not Found:

 

MIPS Functional Classification

Category          p-value In Category from Cluster          k          f

C-compound and carbohydrate metabolism      5.33529e-05    HXT6 EMI2 GUT1 MSN4 GSF2 FUN34       6          415

 

 

 

MIPS Phenotypes

Category          p-value In Category from Cluster          k          f

 

 

 

MIPS Subcellular Localization

Category          p-value In Category from Cluster          k          f

 

 

 

MIPS Protein Complexes

Category          p-value In Category from Cluster          k          f

 

 

 

MIPS Protein Classes

Category          p-value In Category from Cluster          k          f

 

 

 

GO Molecular Function

Category          p-value In Category from Cluster          k          f

 

 

 

GO Biological Process

Category          p-value In Category from Cluster          k          f

 

 

 

GO Cellular Component

Category          p-value In Category from Cluster          k          f

 

 

 

SMART Domains

Category          p-value In Category from Cluster          k          f

 

 

 

PFam-A Domains

Category          p-value In Category from Cluster          k          f

 

 

 

Yeast Two Hybrid - Uetz

Category          p-value In Category from Cluster          k          f

 

 

 

Yeast Two Hybrid - Ito (core)

Category          p-value In Category from Cluster          k          f

 

 

 

Yeast Two Hybrid - Ito (full)

Category          p-value In Category from Cluster          k          f

 

 

 

Synthetic Genetic Array Analysis

Category          p-value In Category from Cluster          k          f

 

 

 

MDS Proteomics Complexes

Category          p-value In Category from Cluster          k          f

YNL032W (SIW14)    3.36143e-06    HXT6 EMI2    2          2

YDL100C (ARR4)      5.02072e-05    MSN4 GSF2   2          6

 

 

 

Cellzome Complexes

Category          p-value In Category from Cluster          k          f

 

 

 

Proteome Localization--Observed

Category          p-value In Category from Cluster          k          f

 

 

 

Proteome Localization--Predicted+Observed

Category          p-value In Category from Cluster          k          f

 

 

 

Deletions Consortium (Essentiality, Morphology)

Category          p-value In Category from Cluster          k          f

 

 

 

Yeast Fitness Data

Category          p-value In Category from Cluster          k          f

 

 

 

Published Complexes

Category          p-value In Category from Cluster          k          f


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Mig1-ChIPandnotPBM-alldata.FunSpec.txt

 

Input Cluster (n=15)

YCR073C       SSK22

YCR073W-A  SOL2

YDL149W       APG9

YDR441C       APT2

YEL066W       HPA3

YEL069C        HXT13

YEL070W

YHR062C       RPP1

YJL214W        HXT8

YJL216C

YLR241W

YMR163C

YMR260C       TIF11

YOR178C       GAC1

YPR184W       GDB1

 

Genes Not Found:

 

MIPS Functional Classification

Category          p-value In Category from Cluster          k          f

metabolism of energy reserves (glycogen, trehalose)      8.21052e-05    YJL216C GAC1 GDB1           3          37

 

 

 

MIPS Phenotypes

Category          p-value In Category from Cluster          k          f

 

 

 

MIPS Subcellular Localization

Category          p-value In Category from Cluster          k          f

 

 

 

MIPS Protein Complexes

Category          p-value In Category from Cluster          k          f

 

 

 

MIPS Protein Classes

Category          p-value In Category from Cluster          k          f

 

 

 

GO Molecular Function

Category          p-value In Category from Cluster          k          f

 

 

 

GO Biological Process

Category          p-value In Category from Cluster          k          f

 

 

 

GO Cellular Component

Category          p-value In Category from Cluster          k          f

 

 

 

SMART Domains

Category          p-value In Category from Cluster          k          f

 

 

 

PFam-A Domains

Category          p-value In Category from Cluster          k          f

 

 

 

Yeast Two Hybrid - Uetz

Category          p-value In Category from Cluster          k          f

 

 

 

Yeast Two Hybrid - Ito (core)

Category          p-value In Category from Cluster          k          f

 

 

 

Yeast Two Hybrid - Ito (full)

Category          p-value In Category from Cluster          k          f

 

 

 

Synthetic Genetic Array Analysis

Category          p-value In Category from Cluster          k          f

 

 

 

MDS Proteomics Complexes

Category          p-value In Category from Cluster          k          f

 

 

 

Cellzome Complexes

Category          p-value In Category from Cluster          k          f

 

 

 

Proteome Localization--Observed

Category          p-value In Category from Cluster          k          f

 

 

 

Proteome Localization--Predicted+Observed

Category          p-value In Category from Cluster          k          f

 

 

 

Deletions Consortium (Essentiality, Morphology)

Category          p-value In Category from Cluster          k          f

 

 

 

Yeast Fitness Data

Category          p-value In Category from Cluster          k          f

 

 

 

Published Complexes

Category          p-value In Category from Cluster          k          f


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Mig1-ChIPandnotPBM-2SD.FunSpec.txt:

 

Input Cluster (n=3)

YEL066W       HPA3

YEL069C        HXT13

YEL070W

 

Genes Not Found:

 

MIPS Functional Classification

Category          p-value In Category from Cluster          k          f

 

 

 

MIPS Phenotypes

Category          p-value In Category from Cluster          k          f

 

 

 

MIPS Subcellular Localization

Category          p-value In Category from Cluster          k          f

 

 

 

MIPS Protein Complexes

Category          p-value In Category from Cluster          k          f

 

 

 

MIPS Protein Classes

Category          p-value In Category from Cluster          k          f

 

 

 

GO Molecular Function

Category          p-value In Category from Cluster          k          f

 

 

 

GO Biological Process

Category          p-value In Category from Cluster          k          f

 

 

 

GO Cellular Component

Category          p-value In Category from Cluster          k          f

 

 

 

SMART Domains

Category          p-value In Category from Cluster          k          f

 

 

 

PFam-A Domains

Category          p-value In Category from Cluster          k          f

 

 

 

Yeast Two Hybrid - Uetz

Category          p-value In Category from Cluster          k          f

 

 

 

Yeast Two Hybrid - Ito (core)

Category          p-value In Category from Cluster          k          f

 

 

 

Yeast Two Hybrid - Ito (full)

Category          p-value In Category from Cluster          k          f

 

 

 

Synthetic Genetic Array Analysis

Category          p-value In Category from Cluster          k          f

 

 

 

MDS Proteomics Complexes

Category          p-value In Category from Cluster          k          f

 

 

 

Cellzome Complexes

Category          p-value In Category from Cluster          k          f

 

 

 

Proteome Localization--Observed

Category          p-value In Category from Cluster          k          f

 

 

 

Proteome Localization--Predicted+Observed

Category          p-value In Category from Cluster          k          f

 

 

 

Deletions Consortium (Essentiality, Morphology)

Category          p-value In Category from Cluster          k          f

 

 

 

Yeast Fitness Data

Category          p-value In Category from Cluster          k          f

 

 

 

Published Complexes

Category          p-value In Category from Cluster          k          f


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Mig1-ChIPandnotPBM-exact.FunSpec.txt
:  doesn't exist because 0 intergenic regions passed this site conservation criterion

(go back to top)


(e)  Listing of what percentage of all PBM-derived predicted target genes (at 0.001 p-value threshold for the PBM data) were up- or down-regulated at least 2.5-fold in each significant condition for each of Abf1, Mig1, and Rap1.

ABF1 – UPREGULATED (276 ORFs):


0 significant conditions


ABF1 – DOWNREGULATED (276 ORFs):

0 significant conditions


MIG1 – UPREGULATED (94 ORFs):

11 significant conditions

1. Score: 36.2    Condition: Yeast_Hughes00_sir4
2. Score: 30.9    Condition: Yeast_Hughes00_tom6
3. Score: 28.7    Condition: Yeast_Gasch00_YPD_5_d_25C
4. Score: 27.7    Condition: Yeast_Gasch00_YPD_1_d_25C
5. Score: 26.6    Condition: Yeast_Gasch00_YPD_6_h_30C
6. Score: 25.5    Condition: Yeast_Gasch00_YPD_2_d_25C
7. Score: 25.5    Condition: Yeast_Gasch00_YPD_13_d_25C
8. Score: 25.5    Condition: Yeast_Gasch00_YPD_7_d_25C
9. Score: 24.5    Condition: Yeast_Gasch00_YPD_3_d_30C
10. Score: 24.5    Condition: Yeast_Gasch00_YPD_12_h_25C
11. Score: 24.5    Condition: Yeast_Gasch00_heat_shock_10_min

47 / 87 PBM-only ORFs accounted for (54%)
2 / 2 PBM-and-ChIP ORFs accounted for (100%)

16 / 31 uncharacterized “all PBM” targets accounted for
15 / 29 uncharacterized “PBM-only” targets accounted for
YFL054C
YGR067C
YGR243W
YGR294W
YHR033W
YIL024C
YIL057C
YIR016W
YKL218C
YKR075C
YLR023C
YML107C
YMR206W
YNR071C
YPL201C

MIG1 – DOWNREGULATED (94 ORFs):

3 significant conditions

1. Score: 28.7    Condition: Yeast_Gasch00_YP_glucose_vs_reference_pool
2. Score: 28.7    Condition: Yeast_Gasch00_YP_fructose_vs_reference_pool
3. Score: 24.5    Condition: Yeast_Gasch01_mec1_plus_gamma_45_min

40 / 87 PBM-only ORFs accounted for (46%)
1 / 2 PBM-and-ChIP ORFs accounted for (50%)

15 / 31 uncharacterized “all PBM” targets accounted for
14 / 29 uncharacterized “PBM-only” targets accounted for
YDR517W
YFL054C
YFR055W
YGR067C
YGR243W
YGR294W
YHR033W
YIL057C
YIR016W
YKL218C
YKR075C
YLR023C
YMR206W
YPL201C

MIG1 – COMBINED (UP AND DOWN):

54 / 87 PBM-only ORFs accounted for (62%)
2 / 2 PBM-and-ChIP ORFs accounted for (100%)

18 / 31 uncharacterized “all PBM” targets accounted for
17 / 29 uncharacterized “PBM-only” targets accounted for


RAP1 – UPREGULATED (447 ORFs)
:

26 significant conditions

1. Score: 28.0    Condition: Yeast_Gasch00_dtt_000_min
2. Score: 27.5    Condition: Yeast_Gasch00_25C_60_min
3. Score: 27.1    Condition: Yeast_Gasch00_25C_90_min
4. Score: 25.1    Condition: Yeast_Gasch00_Heat_Shock_000_minutes_series_2
5. Score: 24.6    Condition: Yeast_Gasch00_Heat_Shock_000_minutes
6. Score: 24.4    Condition: Yeast_Spellman98_Elutriation2_Sample2_Time2_0hrs
7. Score: 22.1    Condition: Yeast_Gasch00_Heat_Shock_000_minutes_series_3
8. Score: 22.1    Condition: Yeast_Spellman98_Elutriation2_Sample2_Time1_5hrs
9. Score: 22.1    Condition: Yeast_Gasch01_MHY1_crt1_vs_CRY1_wild_type_log_pha
10. Score: 20.8    Condition: Yeast_Spellman98_Elutriation2_Sample2_Time2_5hrs
11. Score: 20.6    Condition: Yeast_Zhu00_cell_cycle_alpha_factor_fkh1_fkh2_000min
12. Score: 20.4    Condition: Yeast_Gasch00_25C_30_min
13. Score: 20.1    Condition: Yeast_Gasch00_dtt_015_min
14. Score: 20.1    Condition: Yeast_Ferea99_parent_vs_evolved_3
15. Score: 19.5    Condition: Yeast_Gasch00_2_5mM_DTT_005_min
16. Score: 19.0    Condition: Yeast_Gasch00_dtt_030_min
17. Score: 19.0    Condition: Yeast_Gasch00_heat_shock_37_to_37_30_minutes
18. Score: 18.8    Condition: Yeast_Spellman98_Elutriation2_Sample2_Time3_5hrs
19. Score: 17.4    Condition: Yeast_Spellman98_Elutriation2_Sample2_Time3_0hrs
20. Score: 17.2    Condition: Yeast_Spellman98_Elutriation2_Sample2_Time1_0hrs
21. Score: 17.0    Condition: Yeast_Gasch00_YP_fructose_vs_reference_pool
22. Score: 17.0    Condition: Yeast_Gasch00_steady_state_21_dec_C
23. Score: 16.3    Condition: Yeast_Gasch00_steady_state_25_dec_C
24. Score: 15.7    Condition: Yeast_Sudarsanam00_swi1_rich_medium_experiment_2
25. Score: 15.4    Condition: Yeast_Gasch00_29_deg_growth
26. Score: 15.2    Condition: Yeast_Gasch01_DES459_mec1_0_02_MMS_5_min

65 / 125 PBM-only ORFs accounted for (52%)
220 / 317 PBM-and-ChIP ORFs accounted for (69%)

35 / 90 uncharacterized “all PBM” targets accounted for
14 / 40 uncharacterized “PBM-only” targets accounted for
YBR052C
YDR119W
YFR032C
YGR052W
YIL001W
YJL077C
YKL082C
YLR003C
YLR023C
YLR413W
YML011C
YMR206W
YNR070W
YOR093C


RAP1 – DOWNREGULATED (447 ORFs):

75 significant conditions

1. Score: 29.1    Condition: Yeast_Gasch00_YPD_12_h_25C
2. Score: 29.1    Condition: Yeast_Gasch00_dtt_240_min
3. Score: 28.6    Condition: Yeast_Gasch00_Amino_acid_adenine_starvation_0_5_h
4. Score: 28.4    Condition: Yeast_Gasch00_YPD_1_d_25C
5. Score: 28.2    Condition: Yeast_Gasch00_heat_shock_21_to_37_20_minutes
6. Score: 28.2    Condition: Yeast_Gasch00_Nitrogen_Depletion_8_h
7. Score: 27.7    Condition: Yeast_Gasch00_YPD_2_d_25C
8. Score: 27.7    Condition: Yeast_Gasch00_YPD_3_d_25C
9. Score: 27.7    Condition: Yeast_Gasch00_YPD_10_h_30C
10. Score: 27.7    Condition: Yeast_Gasch00_heat_shock_25_to_37_20_minutes
11. Score: 27.5    Condition: Yeast_Gasch00_YPD_8_h_30C
12. Score: 27.3    Condition: Yeast_Gasch00_YPD_13_d_25C
13. Score: 27.1    Condition: Yeast_Gasch01_DES459_mec1_heat_20_min
14. Score: 27.1    Condition: Yeast_Gasch00_heat_shock_17_to_37_20_minutes
15. Score: 26.8    Condition: Yeast_Gasch00_heat_shock_29_to_37_20_minutes
16. Score: 26.8    Condition: Yeast_Gasch00_DBYyap1_37degree_heat_repeat
17. Score: 26.6    Condition: Yeast_Gasch00_Nitrogen_Depletion_1_h
18. Score: 26.6    Condition: Yeast_Gasch00_dtt_120_min
19. Score: 26.6    Condition: Yeast_Gasch01_MHY1_dun1_heat_20_min
20. Score: 26.6    Condition: Yeast_Gasch00_YPD_12_h_30C
21. Score: 26.2    Condition: Yeast_DeRisi97_diauxic_shift_timecourse_20_5_hr
22. Score: 26.0    Condition: Yeast_Gasch00_YPD_6_h_30C
23. Score: 26.0    Condition: Yeast_Gasch00_2_5mM_DTT_180_min
24. Score: 25.3    Condition: Yeast_Gasch00_YPD_2_d_30C
25. Score: 25.3    Condition: Yeast_Gasch00_DBYmsn2_4_37degree_heat_20_min
26. Score: 25.3    Condition: Yeast_Gasch00_Nitrogen_Depletion_30_min_
27. Score: 25.3    Condition: Yeast_Gasch00_Nitrogen_Depletion_12_h
28. Score: 25.1    Condition: Yeast_Gasch00_DBYyap1_37degree_heat_20_min_re
29. Score: 24.8    Condition: Yeast_Gasch00_Amino_acid_adenine_starvation_1_h
30. Score: 24.6    Condition: Yeast_Gasch00_YPD_1_d_30C
31. Score: 24.4    Condition: Yeast_Gasch00_heat_shock_40_min
32. Score: 24.2    Condition: Yeast_Zhu00_cell_cycle_alpha_factor_fkh1_fkh2_180mi
33. Score: 23.9    Condition: Yeast_Gasch00_heat_shock_20_min_repeat
34. Score: 23.9    Condition: Yeast_Zhu00_cell_cycle_alpha_factor_fkh1_fkh2_150mi
35. Score: 23.9    Condition: Yeast_Gasch00_YPD_5_d_30C
36. Score: 23.0    Condition: Yeast_Gasch00_DBY7286_37degree_heat_20_min
37. Score: 22.8    Condition: Yeast_DeRisi97_diauxic_shift_timecourse_18_5_hr
38. Score: 22.6    Condition: Yeast_Gasch01_wt_plus_gamma_20_min
39. Score: 22.6    Condition: Yeast_Gasch00_YPD_3_d_30C
40. Score: 22.6    Condition: Yeast_Gasch00_1_5_mM_diamide_40_min
41. Score: 22.4    Condition: Yeast_Gasch00_YPD_5_d_25C
42. Score: 21.9    Condition: Yeast_Gasch00_Heat_Shock_030inutes
43. Score: 21.7    Condition: Yeast_Gasch01_DES459_mec1_mock_irradiation_30mi
44. Score: 21.3    Condition: Yeast_Gasch01_wt_plus_gamma_30_min
45. Score: 21.0    Condition: Yeast_Gasch01_DES459_mec1_mock_irradiation_15mi
46. Score: 21.0    Condition: Yeast_Gasch00_heat_shock_15_min
47. Score: 20.8    Condition: Yeast_Gasch00_YPD_7_d_25C
48. Score: 20.6    Condition: Yeast_Gasch00_Nitrogen_Depletion_2_h
49. Score: 20.1    Condition: Yeast_Gasch00_Heat_Shock_015_minutes
50. Score: 19.7    Condition: Yeast_Gasch00_heat_shock_60_min
51. Score: 19.5    Condition: Yeast_Hughes00_ypl216w
52. Score: 19.5    Condition: Yeast_Gasch00_constant_0_32_mM_H2O2_30_min_re
53. Score: 19.5    Condition: Yeast_Zhu00_cell_cycle_alpha_factor_fkh1_fkh2_165mi
54. Score: 19.2    Condition: Yeast_Gasch00_heat_shock_20_min
55. Score: 19.0    Condition: Yeast_Gasch00_Nitrogen_Depletion_1_d
56. Score: 18.8    Condition: Yeast_Gasch00_1_5_mM_diamide_50_min
57. Score: 18.6    Condition: Yeast_Zhu00_cell_cycle_alpha_factor_fkh1_fkh2_120mi
58. Score: 18.6    Condition: Yeast_Gasch00_Nitrogen_Depletion_2_d
59. Score: 18.1    Condition: Yeast_Gasch00_1M_sorbitol_15_min
60. Score: 18.1    Condition: Yeast_Gasch00_2_5mM_DTT_120_min
61. Score: 17.7    Condition: Yeast_Hughes00_yhl013c
62. Score: 17.4    Condition: Yeast_Hughes00_yer066c-a
63. Score: 17.2    Condition: Yeast_Zhu00_cell_cycle_alpha_factor_fkh1_fkh2_105mi
64. Score: 17.2    Condition: Yeast_Gasch00_YP_ethanol_vs_reference_pool
65. Score: 17.2    Condition: Yeast_Hughes00_ERG11_ tet_promoter
66. Score: 17.0    Condition: Yeast_Hughes00_bul1
67. Score: 16.8    Condition: Yeast_Hughes00_ubr1
68. Score: 16.6    Condition: Yeast_Gasch00_1_5_mM_diamide_30_min
69. Score: 16.6    Condition: Yeast_Gasch00_DBYyap1_0_32_mM_H2O2_20_min
70. Score: 16.6    Condition: Yeast_Zhu00_cell_cycle_alpha_factor_fkh1_fkh2_060mi
71. Score: 16.3    Condition: Yeast_Hughes00_ymr244c-a
72. Score: 16.1    Condition: Yeast_Gasch00_DBY_msn2msn4_37C_20_min
73. Score: 16.1    Condition: Yeast_Gasch01_DES460_wild_type_heat_20_min
74. Score: 15.7    Condition: Yeast_Gasch00_1M_sorbitol_30_min
75. Score: 15.4    Condition: Yeast_Gasch01_mec1_plus_gamma_10_min

80 / 125 PBM-only ORFs accounted for (64%)
238 / 317 PBM-and-ChIP ORFs accounted for (75%)

46 / 90 uncharacterized “all PBM” targets accounted for
19 / 40 uncharacterized “PBM-only” targets accounted for
YBR052C
YDR119W
YDR249C
YER158C
YFR032C
YGR052W
YJL077C
YKL033W
YKL082C
YLR003C
YLR407W
YLR413W
YML011C
YMR027W
YMR087W
YMR206W
YMR251W
YNR070W
YOR093C

RAP1 COMBINED (UP AND DOWN):

89 / 125 PBM-only ORFs accounted for (71%)
263 / 317 PBM-and-ChIP ORFs accounted for (83%)

57 / 90 uncharacterized “all PBM” targets accounted for
21 / 40 uncharacterized “PBM-only” targets accounted for


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